F399921

General Info

Members Datasets Scaffolds Average Seq Length
308 211 616 331

Family's Representative Sequence

Representative Sequence 3300050511|nmdc:mga08y16_124797_c1|nmdc:mga08y16_124797_c1_83_1276
Length 397
Sequence LPHPDVRVTARPAGVRFADAVPRQPAGPKAVLSDPTLKRLTPVPVGGSPRVLDTAGTGAARTGRSEMTETIDVTRLNEAVREESMQVQTAINEMRKVIVGQKTLLERMMVALLCRGHLLVEGLPGLAKTLAVKTLGQVLDLQFSRIQFTPDLLPADLIGTMIFVQKTGEFAARKGPVFTNLLLADEINRAPAKVQSALLEAMQERQVTIGDTSHKLPAPFLVFATQNPIEQEGTYPLPEAQVDRFLLKTKVDYPKQEEERQIFDRMLSGEIPKVERVLKADAVHRLVQRAREVYIDERLRDYMVALVTATRRPREIGLVDLAPMIAFGASPRATLSFSEASRAIAFLRGRGYVIPEDVKEIAKDVLRHRILLTYEAEAENITTETVVEQILEHVEVP

Samples

Sample ID Description Type Environment
1 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
5 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
6 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
7 3300002739 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mTSA Metagenome Endosphere
8 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
9 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
10 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
11 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
12 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
13 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
14 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
15 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
16 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
17 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
18 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
19 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
20 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
21 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
22 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
23 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
24 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
25 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
26 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
27 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
28 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
29 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
30 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
31 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
32 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
33 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
34 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
35 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
36 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
37 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
38 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
39 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
40 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
41 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
42 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
43 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
44 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
45 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
46 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
47 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
48 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
49 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
50 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
51 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
52 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
53 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
54 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
55 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
56 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
57 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
58 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
59 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
60 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
61 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
62 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
63 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
64 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
65 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
66 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
67 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
68 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
69 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
70 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
71 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
72 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
73 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
74 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
75 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
76 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
77 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
78 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
79 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
80 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
81 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
82 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
83 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
84 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
85 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
86 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
87 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
88 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
89 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
90 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
91 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
117 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
119 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
120 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
121 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
122 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
123 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
124 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
125 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
126 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
127 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
128 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
129 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
130 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
131 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
132 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
133 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
134 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
135 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
136 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
137 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
138 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
139 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
140 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
141 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
142 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
143 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
144 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
145 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
146 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
147 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
148 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
149 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
150 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
151 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
152 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
153 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
154 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
155 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
156 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
157 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
158 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
159 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
160 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
161 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
162 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
163 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
164 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
165 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
166 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
167 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
168 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
169 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
170 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
171 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
172 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
173 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
174 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
175 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
176 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
177 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
178 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
179 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
180 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
181 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
182 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
183 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
184 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
185 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
186 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
187 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
188 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
189 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
190 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
191 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
192 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
193 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
194 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
195 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
196 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
197 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
198 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
199 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
200 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
201 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
202 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
203 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
204 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
205 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
206 2818991444 Filimonas endophytica 3197 Isolate Unclassified
207 2896109856 Chitinophaga sp. SYP-B3965 Isolate Rhizosphere
208 2929154850 Filimonas sp. R-72421 Hybrid assembly Isolate Unclassified
209 2929177148 Chitinophaga sp. R-72269 Hybrid assembly Isolate Unclassified
210 2929239360 Chitinophaga sp. R-73072 Hybrid assembly Isolate Unclassified
211 2946013367 Chitinophaga sp. W3I9 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.05
Metatranscriptomes 0
Isolates 1.95

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.25
Nodule 0
Rhizoplane 2.6
Rhizosphere 92.53
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga08y16_124797_c1 3300050511 Bacteria 2678
2 SwRhRL2b_contig_3338133 2162886007 Bacteria 1402
3 JGI24740J21852_10012331 3300001979 Bacteria 3224
4 JGI24739J22299_10003431 3300001989 Bacteria 6045
5 JGI24737J22298_10000268 3300001990 Bacteria 17143
6 JGI24735J21928_10000031 3300002067 Bacteria 75354
7 JGI25158J39367_1004946 3300002739 Bacteria 1971
8 JGI25406J46586_10000151 3300003203 Bacteria 30514
9 rootH1_10094007 3300003316 Bacteria 2081
10 Ga0055542_1003719 3300003762 Bacteria 3987
11 Ga0065704_10072634 3300005289 Bacteria 8222
12 Ga0065704_10090063 3300005289 Bacteria 2815
13 Ga0065707_10106591 3300005295 Bacteria 2589
14 Ga0065707_10135018 3300005295 Bacteria 1856
15 Ga0070658_10121726 3300005327 Bacteria 2168
16 Ga0070658_10265516 3300005327 Bacteria 1458
17 Ga0070676_10033915 3300005328 Bacteria 2929
18 Ga0070683_100075789 3300005329 Bacteria 3143
19 Ga0070683_100173068 3300005329 Bacteria 2049
20 Ga0070690_100002560 3300005330 Bacteria 9784
21 Ga0070690_100087629 3300005330 Bacteria 2045
22 Ga0070670_100297204 3300005331 Bacteria 1412
23 Ga0070666_10101164 3300005335 Bacteria 1986
24 Ga0070680_100193553 3300005336 Bacteria 1714
25 Ga0070682_100048235 3300005337 Bacteria 2651
26 Ga0068868_100072815 3300005338 Bacteria 2742
27 Ga0070660_100174903 3300005339 Bacteria 1736
28 Ga0070661_100113526 3300005344 Bacteria 2024
29 Ga0070692_10020347 3300005345 Bacteria 3217
30 Ga0070675_100351742 3300005354 Bacteria 1307
31 Ga0070674_100009581 3300005356 Bacteria 5803
32 Ga0070673_100003734 3300005364 Bacteria 9547
33 Ga0070673_100059534 3300005364 Bacteria 3024
34 Ga0070659_100222095 3300005366 Bacteria 1559
35 Ga0070667_100145356 3300005367 Bacteria 2079
36 Ga0070705_100272761 3300005440 Bacteria 1199
37 Ga0070700_100018053 3300005441 Bacteria 4049
38 Ga0070694_100035997 3300005444 Bacteria 3276
39 Ga0070694_100112427 3300005444 Bacteria 1942
40 Ga0070694_100304657 3300005444 Bacteria 1222
41 Ga0070662_100191432 3300005457 Bacteria 1618
42 Ga0070681_10168880 3300005458 Bacteria 2110
43 Ga0070681_10271389 3300005458 Bacteria 1608
44 Ga0070685_10085814 3300005466 Bacteria 1896
45 Ga0070706_100019112 3300005467 Bacteria 6322
46 Ga0070698_100008690 3300005471 Bacteria 10941
47 Ga0070698_100024705 3300005471 Bacteria 6268
48 Ga0070679_100075101 3300005530 Bacteria 3370
49 Ga0070684_100031311 3300005535 Bacteria 4527
50 Ga0070684_100427055 3300005535 Bacteria 1224
51 Ga0070697_100014887 3300005536 Bacteria 6105
52 Ga0068853_100124867 3300005539 Bacteria 2298
53 Ga0068853_100230867 3300005539 Bacteria 1693
54 Ga0070672_100010014 3300005543 Bacteria 6559
55 Ga0070686_100005264 3300005544 Bacteria 7148
56 Ga0070695_100000318 3300005545 Bacteria 24702
57 Ga0070696_100350673 3300005546 Bacteria 1143
58 Ga0070665_100028436 3300005548 Bacteria 5629
59 Ga0070704_100006105 3300005549 Bacteria 7071
60 Ga0070704_100065997 3300005549 Bacteria 2608
61 Ga0070704_100414170 3300005549 Bacteria 1153
62 Ga0068855_100251504 3300005563 Bacteria 1971
63 Ga0068855_100729530 3300005563 Bacteria 1058
64 Ga0070664_100033529 3300005564 Bacteria 4302
65 Ga0068854_100264986 3300005578 Bacteria 1377
66 Ga0068852_100551777 3300005616 Bacteria 1153
67 Ga0068859_100000040 3300005617 Bacteria 162782
68 Ga0068861_100073129 3300005719 Bacteria 2662
69 Ga0068863_100530997 3300005841 Bacteria 1161
70 Ga0068860_100322466 3300005843 Bacteria 1516
71 Ga0081539_10000037 3300005985 Bacteria 296160
72 Ga0075365_10013488 3300006038 Bacteria 4891
73 Ga0075432_10040134 3300006058 Bacteria 1633
74 Ga0075366_10008967 3300006195 Bacteria 5577
75 Ga0075366_10028332 3300006195 Bacteria 3287
76 Ga0097621_100024452 3300006237 Bacteria 4717
77 Ga0068871_100321914 3300006358 Bacteria 1362
78 Ga0075428_100020850 3300006844 Bacteria 7257
79 Ga0075428_100031387 3300006844 Bacteria 5874
80 Ga0075428_100037450 3300006844 Bacteria 5340
81 Ga0075428_100158100 3300006844 Bacteria 2460
82 Ga0075430_100032684 3300006846 Bacteria 4416
83 Ga0075430_100090490 3300006846 Bacteria 2560
84 Ga0075431_100003283 3300006847 Bacteria 15654
85 Ga0075431_100283641 3300006847 Bacteria 1677
86 Ga0075433_10005619 3300006852 Bacteria 9856
87 Ga0075433_10008644 3300006852 Bacteria 8125
88 Ga0075434_100009688 3300006871 Bacteria 9001
89 Ga0075434_100031354 3300006871 Bacteria 5240
90 Ga0075434_100036209 3300006871 Bacteria 4882
91 Ga0075434_100310896 3300006871 Bacteria 1596
92 Ga0075429_100021479 3300006880 Bacteria 5596
93 Ga0075429_100047131 3300006880 Bacteria 3750
94 Ga0075429_100135923 3300006880 Bacteria 2151
95 Ga0097620_100000040 3300006931 Bacteria 162782
96 Ga0097620_100006235 3300006931 Bacteria 12106
97 Ga0075435_100071268 3300007076 Bacteria 2838
98 Ga0105240_10001895 3300009093 Bacteria 34715
99 Ga0105240_10325242 3300009093 Bacteria 1751
100 Ga0111539_10088953 3300009094 Bacteria 3628
101 Ga0111539_10470446 3300009094 Bacteria 1464
102 Ga0105245_10327810 3300009098 Bacteria 1510
103 Ga0105247_10014484 3300009101 Bacteria 4730
104 Ga0114129_10027558 3300009147 Bacteria 8044
105 Ga0114129_10073960 3300009147 Bacteria 4747
106 Ga0105243_10023315 3300009148 Bacteria 4711
107 Ga0105242_10013104 3300009176 Bacteria 6397
108 Ga0105248_10085144 3300009177 Bacteria 3557
109 Ga0105248_10629314 3300009177 Bacteria 1211
110 Ga0099796_10028018 3300010159 Bacteria 1805
111 Ga0105239_10012373 3300010375 Bacteria 9501
112 Ga0105239_10041498 3300010375 Bacteria 5042
113 Ga0105239_10060069 3300010375 Bacteria 4172
114 Ga0157370_10131255 3300013104 Bacteria 2337
115 Ga0157369_10002509 3300013105 Bacteria 21971
116 Ga0157374_10392567 3300013296 Bacteria 1383
117 Ga0157378_10027277 3300013297 Bacteria 5041
118 Ga0157378_10066213 3300013297 Bacteria 3235
119 Ga0163162_10139493 3300013306 Bacteria 2536
120 Ga0157372_10002519 3300013307 Bacteria 19877
121 Ga0157372_10109614 3300013307 Bacteria 3162
122 Ga0157375_10142254 3300013308 Bacteria 2527
123 Ga0163163_10005559 3300014325 Bacteria 10916
124 Ga0163163_10484729 3300014325 Bacteria 1298
125 Ga0157380_10000187 3300014326 Bacteria 35889
126 Ga0157380_10007764 3300014326 Bacteria 7635
127 Ga0182005_1000017 3300015265 Bacteria 331828
128 Ga0207426_1005099 3300025302 Bacteria 6133
129 Ga0207710_10103208 3300025900 Bacteria 1347
130 Ga0207645_10034705 3300025907 Bacteria 3241
131 Ga0207684_10015941 3300025910 Bacteria 6458
132 Ga0207695_10022154 3300025913 Bacteria 7224
133 Ga0207695_10231589 3300025913 Bacteria 1751
134 Ga0207662_10041849 3300025918 Bacteria 2698
135 Ga0207657_10018525 3300025919 Bacteria 6641
136 Ga0207652_10114158 3300025921 Bacteria 2398
137 Ga0207681_10001585 3300025923 Bacteria 14639
138 Ga0207706_10014224 3300025933 Bacteria 7214
139 Ga0207706_10045370 3300025933 Bacteria 3895
140 Ga0207686_10016320 3300025934 Bacteria 4168
141 Ga0207709_10065723 3300025935 Bacteria 2282
142 Ga0207670_10156264 3300025936 Bacteria 1698
143 Ga0207669_10019676 3300025937 Bacteria 3522
144 Ga0207704_10008981 3300025938 Bacteria 4804
145 Ga0207704_10371404 3300025938 Bacteria 1120
146 Ga0207691_10020157 3300025940 Bacteria 6307
147 Ga0207691_10388839 3300025940 Bacteria 1190
148 Ga0207661_10001719 3300025944 Bacteria 14980
149 Ga0207661_10354941 3300025944 Bacteria 1323
150 Ga0207651_10000127 3300025960 Bacteria 32622
151 Ga0207712_10102681 3300025961 Bacteria 2129
152 Ga0207703_10083685 3300026035 Bacteria 2666
153 Ga0207703_10109789 3300026035 Bacteria 2352
154 Ga0207708_10009402 3300026075 Bacteria 7236
155 Ga0207702_10344539 3300026078 Bacteria 1424
156 Ga0207648_10014641 3300026089 Bacteria 7241
157 Ga0207674_10388054 3300026116 Bacteria 1350
158 Ga0207675_100003944 3300026118 Bacteria 14402
159 Ga0207683_10204140 3300026121 Bacteria 1797
160 Ga0207428_10010144 3300027907 Bacteria 8424
161 Ga0207428_10104251 3300027907 Bacteria 2189
162 Ga0268266_10041966 3300028379 Bacteria 3906
163 Ga0265323_10000365 3300028653 Bacteria 26035
164 Ga0265336_10014616 3300028666 Bacteria 2596
165 Ga0265324_10044424 3300029957 Bacteria 1532
166 Ga0265327_10000400 3300031251 Bacteria 81145
167 Ga0265327_10024671 3300031251 Bacteria 3524
168 Ga0265316_10002397 3300031344 Bacteria 19511
169 Ga0265316_10301537 3300031344 Bacteria 1167
170 Ga0316579_10013980 3300031691 Bacteria 3462
171 Ga0316579_10060335 3300031691 Bacteria 1784
172 Ga0265342_10015401 3300031712 Bacteria 5031
173 Ga0316576_10018155 3300031727 Bacteria 4795
174 Ga0316576_10078279 3300031727 Bacteria 2450
175 Ga0316576_10099399 3300031727 Bacteria 2173
176 Ga0316576_10230961 3300031727 Bacteria 1391
177 Ga0316578_10000102 3300031728 Bacteria 20094
178 Ga0316577_10001839 3300031733 Bacteria 10245
179 Ga0307409_100092903 3300031995 Bacteria 2477
180 Ga0307416_100155325 3300032002 Bacteria 2105
181 Ga0307411_10009133 3300032005 Bacteria 5191
182 Ga0307415_100149763 3300032126 Bacteria 1794
183 Ga0316585_10029351 3300032137 Bacteria 1722
184 Ga0316585_10036746 3300032137 Bacteria 1553
185 Ga0316585_10046098 3300032137 Bacteria 1395
186 Ga0316574_0006226 3300035398 Bacteria 6429
187 Ga0316574_0046095 3300035398 Bacteria 2702
188 Ga0373935_0145120 3300035692 Bacteria 1606
189 Ga0373927_0123208 3300035695 Bacteria 1692
190 Ga0373947_0038858 3300035725 Bacteria 2830
191 Ga0373937_0151284 3300036401 Bacteria 2174
192 Ga0316582_0005600 3300036647 Bacteria 6493
193 Ga0316582_0014099 3300036647 Bacteria 4525
194 Ga0316582_0129016 3300036647 Bacteria 1697
195 Ga0316582_0144256 3300036647 Bacteria 1606
196 Ga0316584_0026056 3300036712 Bacteria 4294
197 Ga0316584_0057629 3300036712 Bacteria 2908
198 Ga0316584_0059523 3300036712 Bacteria 2860
199 Ga0316584_0060803 3300036712 Bacteria 2830
200 Ga0316584_0065112 3300036712 Bacteria 2730
201 Ga0373925_0003197 3300037068 Bacteria 12808
202 Ga0373925_0027809 3300037068 Bacteria 4140
203 Ga0395900_0038731 3300037418 Bacteria 4914
204 Ga0395900_0350780 3300037418 Bacteria 1449
205 Ga0395905_0097082 3300037471 Bacteria 2766
206 Ga0316581_0002780 3300037588 Bacteria 4253
207 Ga0451577_0024477 3300042876 Bacteria 5492
208 Ga0451577_0088470 3300042876 Bacteria 2763
209 Ga0466963_0097604 3300044694 Bacteria 2008
210 Ga0453684_0000503 3300044712 Bacteria 152937
211 Ga0453684_0001838 3300044712 Bacteria 55467
212 Ga0453684_0002248 3300044712 Bacteria 47861
213 Ga0453684_0005040 3300044712 Bacteria 26781
214 Ga0453684_0005965 3300044712 Bacteria 23625
215 Ga0453684_0019133 3300044712 Bacteria 10448
216 Ga0453684_0033772 3300044712 Bacteria 7120
217 Ga0453684_0035387 3300044712 Bacteria 6904
218 Ga0453684_0035588 3300044712 Bacteria 6879
219 Ga0453684_0056512 3300044712 Bacteria 5090
220 Ga0453684_0215413 3300044712 Bacteria 2228
221 Ga0453684_0240123 3300044712 Bacteria 2086
222 Ga0451576_0000012 3300045051 Bacteria 674684
223 Ga0451576_0001536 3300045051 Bacteria 38840
224 Ga0451576_0002048 3300045051 Bacteria 31732
225 Ga0451576_0013544 3300045051 Bacteria 9121
226 Ga0451576_0145361 3300045051 Bacteria 2472
227 Ga0451576_0415706 3300045051 Bacteria 1411
228 Ga0466967_0481227 3300045976 Bacteria 1216
229 Ga0495592_0172447 3300046454 Bacteria 1480
230 Ga0495629_0000005 3300046459 Bacteria 404868
231 Ga0495650_0000098 3300046471 Bacteria 215716
232 Ga0495639_0005723 3300046475 Bacteria 5348
233 Ga0495585_0000029 3300046492 Bacteria 145822
234 Ga0495594_0016028 3300046499 Bacteria 3944
235 Ga0495583_0033423 3300046506 Bacteria 2474
236 Ga0495606_0000021 3300046507 Bacteria 271238
237 Ga0495610_0004960 3300046512 Bacteria 9639
238 Ga0495630_0079082 3300046517 Bacteria 2480
239 Ga0495666_0000423 3300046526 Bacteria 18759
240 Ga0495586_0147991 3300046535 Bacteria 1320
241 Ga0495609_0074285 3300046538 Bacteria 1491
242 Ga0495622_0009918 3300046557 Bacteria 4406
243 Ga0495633_0000879 3300046558 Bacteria 25944
244 Ga0495634_0007045 3300046642 Bacteria 8481
245 Ga0495625_0001390 3300046660 Bacteria 29676
246 Ga0495635_0000046 3300046663 Bacteria 80626
247 Ga0495661_0035167 3300046665 Bacteria 3146
248 Ga0495613_0117829 3300046689 Bacteria 1909
249 Ga0495624_0132704 3300046690 Bacteria 1527
250 Ga0495649_0000226 3300046694 Bacteria 49102
251 Ga0495581_0009499 3300047315 Bacteria 5628
252 Ga0495674_0005242 3300047319 Bacteria 12441
253 Ga0495676_0015347 3300047321 Bacteria 6824
254 Ga0495680_0003191 3300047322 Bacteria 16310
255 Ga0495673_0021737 3300047469 Bacteria 3160
256 Ga0495684_0007133 3300047471 Bacteria 8671
257 Ga0495686_0033368 3300047472 Bacteria 3324
258 Ga0496101_0008025 3300048904 Bacteria 6881
259 Ga0496109_0097698 3300048912 Bacteria 2722
260 Ga0496112_0359069 3300048915 Bacteria 1399
261 Ga0496113_0249527 3300048916 Bacteria 1417
262 Ga0496114_0168921 3300048917 Bacteria 1905
263 Ga0496114_0176614 3300048917 Bacteria 1863
264 Ga0496115_0086202 3300048918 Bacteria 2562
265 Ga0496115_0239841 3300048918 Bacteria 1494
266 Ga0501031_0035096 3300049568 Bacteria 3271
267 Ga0501032_0059261 3300049569 Bacteria 2569
268 Ga0501034_0026699 3300049571 Bacteria 5875
269 Ga0501034_0091841 3300049571 Bacteria 3033
270 Ga0501036_0027884 3300049572 Bacteria 4774
271 Ga0501041_0065500 3300049577 Bacteria 2226
272 Ga0501048_0063990 3300049582 Bacteria 2601
273 Ga0501073_0005063 3300049589 Bacteria 9885
274 Ga0501076_0038903 3300049592 Bacteria 3733
275 Ga0501035_0029436 3300049822 Bacteria 5007
276 Ga0501045_0035704 3300049824 Bacteria 3609
277 nmdc:mga0k408_23420_c1 3300050493 Bacteria 3483
278 nmdc:mga0k408_86581_c1 3300050493 Bacteria 1839
279 nmdc:mga05p37_12927_c1 3300050507 Bacteria 9985
280 nmdc:mga05p37_134515_c1 3300050507 Bacteria 3033
281 nmdc:mga05p37_31996_c1 3300050507 Bacteria 6431
282 nmdc:mga05p37_353230_c1 3300050507 Bacteria 1730
283 nmdc:mga05p37_408221_c1 3300050507 Bacteria 1584
284 nmdc:mga09592_23033_c1 3300050508 Bacteria 5139
285 nmdc:mga0qj67_333213_c1 3300050509 Bacteria 1228
286 nmdc:mga06r32_20015_c1 3300050510 Bacteria 6152
287 nmdc:mga06r32_228000_c1 3300050510 Bacteria 1851
288 nmdc:mga06r32_269689_c1 3300050510 Bacteria 1689
289 nmdc:mga08y16_17303_c1 3300050511 Bacteria 7589
290 nmdc:mga08y16_82814_c1 3300050511 Bacteria 3345
291 nmdc:mga08y16_89272_c1 3300050511 Bacteria 3212
292 nmdc:mga08y16_9504_c1 3300050511 Bacteria 10205
293 nmdc:mga0n895_157602_c1 3300050512 Bacteria 2301
294 nmdc:mga0n895_29171_c1 3300050512 Bacteria 5258
295 nmdc:mga0n895_360849_c1 3300050512 Bacteria 1471
296 nmdc:mga0a205_10185_c1 3300050515 Bacteria 8635
297 Ga0495601_0017102 3300053077 Bacteria 4401
298 Ga0495619_0055016 3300053085 Bacteria 2635
299 Ga0495619_0187713 3300053085 Bacteria 1431
300 Ga0500644_0000117 3300053088 Bacteria 49928
301 Ga0500645_008609 3300053730 Bacteria 3470
302 Ga0466962_0044277 3300061719 Bacteria 2129
303 2819589866 2818991444 Bacteria 6968812
304 2896115685 2896109856 Bacteria 7140722
305 2929160127 2929154850 Bacteria 6753285
306 2929177364 2929177148 Bacteria 7883697
307 2929239818 2929239360 Bacteria 7745570
308 2946014402 2946013367 Bacteria 7766675
309 nmdc:mga08y16_124797_c1
310 SwRhRL2b_contig_3338133
311 JGI24740J21852_10012331
312 JGI24739J22299_10003431
313 JGI24737J22298_10000268
314 JGI24735J21928_10000031
315 JGI25158J39367_1004946
316 JGI25406J46586_10000151
317 rootH1_10094007
318 Ga0055542_1003719
319 Ga0065704_10072634
320 Ga0065704_10090063
321 Ga0065707_10106591
322 Ga0065707_10135018
323 Ga0070658_10121726
324 Ga0070658_10265516
325 Ga0070676_10033915
326 Ga0070683_100075789
327 Ga0070683_100173068
328 Ga0070690_100002560
329 Ga0070690_100087629
330 Ga0070670_100297204
331 Ga0070666_10101164
332 Ga0070680_100193553
333 Ga0070682_100048235
334 Ga0068868_100072815
335 Ga0070660_100174903
336 Ga0070661_100113526
337 Ga0070692_10020347
338 Ga0070675_100351742
339 Ga0070674_100009581
340 Ga0070673_100003734
341 Ga0070673_100059534
342 Ga0070659_100222095
343 Ga0070667_100145356
344 Ga0070705_100272761
345 Ga0070700_100018053
346 Ga0070694_100035997
347 Ga0070694_100112427
348 Ga0070694_100304657
349 Ga0070662_100191432
350 Ga0070681_10168880
351 Ga0070681_10271389
352 Ga0070685_10085814
353 Ga0070706_100019112
354 Ga0070698_100008690
355 Ga0070698_100024705
356 Ga0070679_100075101
357 Ga0070684_100031311
358 Ga0070684_100427055
359 Ga0070697_100014887
360 Ga0068853_100124867
361 Ga0068853_100230867
362 Ga0070672_100010014
363 Ga0070686_100005264
364 Ga0070695_100000318
365 Ga0070696_100350673
366 Ga0070665_100028436
367 Ga0070704_100006105
368 Ga0070704_100065997
369 Ga0070704_100414170
370 Ga0068855_100251504
371 Ga0068855_100729530
372 Ga0070664_100033529
373 Ga0068854_100264986
374 Ga0068852_100551777
375 Ga0068859_100000040
376 Ga0068861_100073129
377 Ga0068863_100530997
378 Ga0068860_100322466
379 Ga0081539_10000037
380 Ga0075365_10013488
381 Ga0075432_10040134
382 Ga0075366_10008967
383 Ga0075366_10028332
384 Ga0097621_100024452
385 Ga0068871_100321914
386 Ga0075428_100020850
387 Ga0075428_100031387
388 Ga0075428_100037450
389 Ga0075428_100158100
390 Ga0075430_100032684
391 Ga0075430_100090490
392 Ga0075431_100003283
393 Ga0075431_100283641
394 Ga0075433_10005619
395 Ga0075433_10008644
396 Ga0075434_100009688
397 Ga0075434_100031354
398 Ga0075434_100036209
399 Ga0075434_100310896
400 Ga0075429_100021479
401 Ga0075429_100047131
402 Ga0075429_100135923
403 Ga0097620_100000040
404 Ga0097620_100006235
405 Ga0075435_100071268
406 Ga0105240_10001895
407 Ga0105240_10325242
408 Ga0111539_10088953
409 Ga0111539_10470446
410 Ga0105245_10327810
411 Ga0105247_10014484
412 Ga0114129_10027558
413 Ga0114129_10073960
414 Ga0105243_10023315
415 Ga0105242_10013104
416 Ga0105248_10085144
417 Ga0105248_10629314
418 Ga0099796_10028018
419 Ga0105239_10012373
420 Ga0105239_10041498
421 Ga0105239_10060069
422 Ga0157370_10131255
423 Ga0157369_10002509
424 Ga0157374_10392567
425 Ga0157378_10027277
426 Ga0157378_10066213
427 Ga0163162_10139493
428 Ga0157372_10002519
429 Ga0157372_10109614
430 Ga0157375_10142254
431 Ga0163163_10005559
432 Ga0163163_10484729
433 Ga0157380_10000187
434 Ga0157380_10007764
435 Ga0182005_1000017
436 Ga0207426_1005099
437 Ga0207710_10103208
438 Ga0207645_10034705
439 Ga0207684_10015941
440 Ga0207695_10022154
441 Ga0207695_10231589
442 Ga0207662_10041849
443 Ga0207657_10018525
444 Ga0207652_10114158
445 Ga0207681_10001585
446 Ga0207706_10014224
447 Ga0207706_10045370
448 Ga0207686_10016320
449 Ga0207709_10065723
450 Ga0207670_10156264
451 Ga0207669_10019676
452 Ga0207704_10008981
453 Ga0207704_10371404
454 Ga0207691_10020157
455 Ga0207691_10388839
456 Ga0207661_10001719
457 Ga0207661_10354941
458 Ga0207651_10000127
459 Ga0207712_10102681
460 Ga0207703_10083685
461 Ga0207703_10109789
462 Ga0207708_10009402
463 Ga0207702_10344539
464 Ga0207648_10014641
465 Ga0207674_10388054
466 Ga0207675_100003944
467 Ga0207683_10204140
468 Ga0207428_10010144
469 Ga0207428_10104251
470 Ga0268266_10041966
471 Ga0265323_10000365
472 Ga0265336_10014616
473 Ga0265324_10044424
474 Ga0265327_10000400
475 Ga0265327_10024671
476 Ga0265316_10002397
477 Ga0265316_10301537
478 Ga0316579_10013980
479 Ga0316579_10060335
480 Ga0265342_10015401
481 Ga0316576_10018155
482 Ga0316576_10078279
483 Ga0316576_10099399
484 Ga0316576_10230961
485 Ga0316578_10000102
486 Ga0316577_10001839
487 Ga0307409_100092903
488 Ga0307416_100155325
489 Ga0307411_10009133
490 Ga0307415_100149763
491 Ga0316585_10029351
492 Ga0316585_10036746
493 Ga0316585_10046098
494 Ga0316574_0006226
495 Ga0316574_0046095
496 Ga0373935_0145120
497 Ga0373927_0123208
498 Ga0373947_0038858
499 Ga0373937_0151284
500 Ga0316582_0005600
501 Ga0316582_0014099
502 Ga0316582_0129016
503 Ga0316582_0144256
504 Ga0316584_0026056
505 Ga0316584_0057629
506 Ga0316584_0059523
507 Ga0316584_0060803
508 Ga0316584_0065112
509 Ga0373925_0003197
510 Ga0373925_0027809
511 Ga0395900_0038731
512 Ga0395900_0350780
513 Ga0395905_0097082
514 Ga0316581_0002780
515 Ga0451577_0024477
516 Ga0451577_0088470
517 Ga0466963_0097604
518 Ga0453684_0000503
519 Ga0453684_0001838
520 Ga0453684_0002248
521 Ga0453684_0005040
522 Ga0453684_0005965
523 Ga0453684_0019133
524 Ga0453684_0033772
525 Ga0453684_0035387
526 Ga0453684_0035588
527 Ga0453684_0056512
528 Ga0453684_0215413
529 Ga0453684_0240123
530 Ga0451576_0000012
531 Ga0451576_0001536
532 Ga0451576_0002048
533 Ga0451576_0013544
534 Ga0451576_0145361
535 Ga0451576_0415706
536 Ga0466967_0481227
537 Ga0495592_0172447
538 Ga0495629_0000005
539 Ga0495650_0000098
540 Ga0495639_0005723
541 Ga0495585_0000029
542 Ga0495594_0016028
543 Ga0495583_0033423
544 Ga0495606_0000021
545 Ga0495610_0004960
546 Ga0495630_0079082
547 Ga0495666_0000423
548 Ga0495586_0147991
549 Ga0495609_0074285
550 Ga0495622_0009918
551 Ga0495633_0000879
552 Ga0495634_0007045
553 Ga0495625_0001390
554 Ga0495635_0000046
555 Ga0495661_0035167
556 Ga0495613_0117829
557 Ga0495624_0132704
558 Ga0495649_0000226
559 Ga0495581_0009499
560 Ga0495674_0005242
561 Ga0495676_0015347
562 Ga0495680_0003191
563 Ga0495673_0021737
564 Ga0495684_0007133
565 Ga0495686_0033368
566 Ga0496101_0008025
567 Ga0496109_0097698
568 Ga0496112_0359069
569 Ga0496113_0249527
570 Ga0496114_0168921
571 Ga0496114_0176614
572 Ga0496115_0086202
573 Ga0496115_0239841
574 Ga0501031_0035096
575 Ga0501032_0059261
576 Ga0501034_0026699
577 Ga0501034_0091841
578 Ga0501036_0027884
579 Ga0501041_0065500
580 Ga0501048_0063990
581 Ga0501073_0005063
582 Ga0501076_0038903
583 Ga0501035_0029436
584 Ga0501045_0035704
585 nmdc:mga0k408_23420_c1
586 nmdc:mga0k408_86581_c1
587 nmdc:mga05p37_12927_c1
588 nmdc:mga05p37_134515_c1
589 nmdc:mga05p37_31996_c1
590 nmdc:mga05p37_353230_c1
591 nmdc:mga05p37_408221_c1
592 nmdc:mga09592_23033_c1
593 nmdc:mga0qj67_333213_c1
594 nmdc:mga06r32_20015_c1
595 nmdc:mga06r32_228000_c1
596 nmdc:mga06r32_269689_c1
597 nmdc:mga08y16_17303_c1
598 nmdc:mga08y16_82814_c1
599 nmdc:mga08y16_89272_c1
600 nmdc:mga08y16_9504_c1
601 nmdc:mga0n895_157602_c1
602 nmdc:mga0n895_29171_c1
603 nmdc:mga0n895_360849_c1
604 nmdc:mga0a205_10185_c1
605 Ga0495601_0017102
606 Ga0495619_0055016
607 Ga0495619_0187713
608 Ga0500644_0000117
609 Ga0500645_008609
610 Ga0466962_0044277
611 2819589866
612 2896115685
613 2929160127
614 2929177364
615 2929239818
616 2946014402

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07726

AAA_3

ATPase family associated with various cellular activities (AAA)

117

247

0.99

PF17863

AAA_lid_2

AAA lid domain

320

390

0.97

PF07728

AAA_5

AAA domain (dynein-related subfamily)

117

245

0.89

PF20030

bpMoxR

MoxR domain in the MoxR-vWA-beta-propeller ternary systems

85

288

0.87

PF00158

Sigma54_activat

Sigma-54 interaction domain

94

235

0.78

Structural Annotation

Top 5 Hits

ID Description Score Start End
2r44-assembly1.cif.gz_A crystal structure of a putative atpase (chu_0153) from cytophaga hutchinsonii atcc 33406 at 2.00 a resolution 0.9381 5 329
2r44-assembly1.cif.gz_A crystal structure of a putative atpase (chu_0153) from cytophaga hutchinsonii atcc 33406 at 2.00 a resolution 0.9244 5 329
3nbx-assembly1.cif.gz_X crystal structure of e. coli rava (regulatory atpase variant a) in complex with adp 0.8047 13 323
4upb-assembly1.cif.gz_E electron cryo-microscopy of the complex formed between the hexameric atpase rava and the decameric inducible decarboxylase ldci 0.7969 13 326
6q7m-assembly1.cif.gz_Z spiral structure of e. coli rava in the rava-ldci cage-like complex 0.7914 13 323
ID Description Score Start End Superfamily
af_I6YGX9_248_354_1.10.8.80 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Magnesium chelatase subunit I, C-Terminal domain 0.9826 213 324 1.10.8.80
2r44A03 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Magnesium chelatase subunit I, C-Terminal domain 0.9753 215 326 1.10.8.80
af_Q79FN7_233_349_1.10.8.80 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Magnesium chelatase subunit I, C-Terminal domain 0.9709 220 326 1.10.8.80
af_O53314_205_312_1.10.8.80 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3;Magnesium chelatase subunit I, C-Terminal domain 0.9696 222 324 1.10.8.80
af_Q79FN7_37_232_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.969 18 207 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A357XU77-F1-model_v4 ATPase 1 231 329
AF-A0A3C0XHK3-F1-model_v4 ATPase 0.9936 18 136 GO:0005524
GO:0016887
AF-A0A7X5N5M0-F1-model_v4 AAA family ATPase 0.9918 78 151 GO:0005524
GO:0016887
AF-A0A800KB18-F1-model_v4 ATPase 0.9907 228 329
AF-A0A6N7FY43-F1-model_v4 AAA domain-containing protein 0.9896 21 160 GO:0005524
GO:0016887

Map