F399338

General Info

Members Datasets Scaffolds Average Seq Length
307 205 614 280

Family's Representative Sequence

Representative Sequence 3300046506|Ga0495583_0000087|Ga0495583_0000087_7870_8763
Length 297
Sequence LIALIEKEARTAMKLCRYGPKGQEKPGIVGADGTIRDLSGVVSELTIETLGTALGADAAALPVVEGEPRYGVPLKGIGKIVAIGLNYEDHAIESNLPIPTEPMMFMKALSSLSGPNDDVVLPKGSTHGDWEVELGVIIGKTCRYVSEDEALDKVAGYVLVNDVSERFNQKQRGTQWSKGKGHDTFCPVGPWLVTPDEVGDQQDLDMYLDVNGTRMQTGNTRTMIFNIKQLISYVSEYITLYPGDLLITGTPPGVGEGKKPEAIYLKAGDVMELGIAKLGSQKQNVVEWRHLGDEVLG

Samples

Sample ID Description Type Environment
1 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
2 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
5 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
6 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
7 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
8 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
9 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
10 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
11 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
12 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
13 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
18 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
19 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
20 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
21 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
22 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
23 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
24 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
25 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
26 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
27 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
28 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
29 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
30 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
31 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
32 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
33 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
34 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
35 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
36 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
40 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
41 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
42 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
50 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
51 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
54 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
60 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
61 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
66 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
67 3300015684 Plant tissue microbial consortia from sugarcane, Campinas, Sao Paulo, Brazil - 002.2_F02 Metagenome Unclassified
68 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
69 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
70 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
71 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
72 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
73 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
74 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
75 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
109 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
110 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
111 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
112 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
113 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
114 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
115 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
116 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
117 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
118 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
119 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
120 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
121 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
122 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
123 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
124 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
125 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
126 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
127 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
128 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
129 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
130 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
131 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
132 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
133 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
134 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
135 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
136 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
137 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
138 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
139 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
140 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
141 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
142 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
143 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
144 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
145 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
146 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
147 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
148 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
149 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
150 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
151 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
152 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
153 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
154 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
155 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
156 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
157 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
158 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
159 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
160 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
161 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
162 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
163 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
164 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
165 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
166 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
167 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
168 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
169 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
170 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
171 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
172 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
173 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
174 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
175 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
176 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
177 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
178 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
179 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
180 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
181 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
182 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
183 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
184 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
185 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
186 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
187 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
188 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
189 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
190 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
191 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
192 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
193 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
194 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
195 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
196 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
197 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
198 2599185354 Sphingomonas sp. NFR15 Isolate Rhizoplane
199 2751185897 Sphingomonas panacis DCY99 Isolate Unclassified
200 2842694124 Methylopila sp. R-72369 Isolate Unclassified
201 2848297114 Croceibacterium ferulae EGI 63111 Isolate Unclassified
202 2879163058 Sphingomonas pokkalii L3B27 Isolate Rhizosphere
203 2928968154 Sphingomonas trueperi 1075 Isolate Unclassified
204 641522639 Methylobacterium sp. 4-46 Isolate Nodule
205 8054563764 Acuticoccus kalidii M5D2P5 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.39
Metatranscriptomes 0
Isolates 2.61

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.28
Nodule 0.33
Rhizoplane 4.56
Rhizosphere 76.87
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495583_0000087 3300046506 Bacteria 164974
2 JGI24736J21556_1001707 3300001904 Bacteria 3957
3 JGI24739J22299_10001690 3300001989 Bacteria 8379
4 JGI24737J22298_10024566 3300001990 Bacteria 1908
5 JGI24735J21928_10001443 3300002067 Bacteria 8405
6 JGI24738J21930_10000855 3300002075 Bacteria 8732
7 JGI24738J21930_10001097 3300002075 Bacteria 7650
8 JGI25165J46597_1000050 3300003214 Bacteria 242776
9 Ga0065704_10091734 3300005289 Bacteria 2697
10 Ga0070658_10263762 3300005327 Bacteria 1463
11 Ga0070666_10071700 3300005335 Bacteria 2358
12 Ga0070660_100038427 3300005339 Bacteria 3634
13 Ga0070661_100007636 3300005344 Bacteria 7463
14 Ga0070661_100463060 3300005344 Bacteria 1010
15 Ga0070692_10253258 3300005345 Bacteria 1055
16 Ga0070669_100086111 3300005353 Bacteria 2347
17 Ga0070669_100371459 3300005353 Bacteria 1165
18 Ga0070675_100213994 3300005354 Bacteria 1676
19 Ga0070671_100005999 3300005355 Bacteria 9683
20 Ga0070671_100021866 3300005355 Bacteria 5224
21 Ga0070671_100148093 3300005355 Bacteria 1982
22 Ga0070671_100336553 3300005355 Bacteria 1287
23 Ga0070674_100035911 3300005356 Bacteria 3323
24 Ga0070659_100020388 3300005366 Bacteria 5034
25 Ga0070667_100436606 3300005367 Bacteria 1195
26 Ga0070709_10115228 3300005434 Bacteria 1812
27 Ga0070714_100038966 3300005435 Bacteria 3999
28 Ga0070713_100013944 3300005436 Bacteria 5950
29 Ga0070710_10301021 3300005437 Bacteria 1047
30 Ga0070711_100033797 3300005439 Bacteria 3406
31 Ga0070711_100415893 3300005439 Bacteria 1094
32 Ga0070708_100114036 3300005445 Bacteria 2486
33 Ga0070663_100055573 3300005455 Bacteria 2834
34 Ga0070663_100101921 3300005455 Bacteria 2143
35 Ga0070663_100377479 3300005455 Bacteria 1154
36 Ga0070662_100001493 3300005457 Bacteria 14389
37 Ga0070662_100004533 3300005457 Bacteria 8801
38 Ga0070681_10157297 3300005458 Bacteria 2197
39 Ga0070685_10336375 3300005466 Bacteria 1028
40 Ga0070706_100113575 3300005467 Bacteria 2522
41 Ga0070707_100014382 3300005468 Bacteria 7418
42 Ga0070698_100168792 3300005471 Bacteria 2130
43 Ga0070698_100229983 3300005471 Bacteria 1787
44 Ga0070699_100043855 3300005518 Bacteria 3871
45 Ga0070697_100114491 3300005536 Bacteria 2251
46 Ga0070697_100370473 3300005536 Bacteria 1239
47 Ga0068854_100007205 3300005578 Bacteria 7100
48 Ga0068854_100022587 3300005578 Bacteria 4289
49 Ga0068856_100002722 3300005614 Bacteria 18116
50 Ga0068852_100000302 3300005616 Bacteria 33181
51 Ga0068852_100081512 3300005616 Bacteria 2872
52 Ga0068852_100246128 3300005616 Bacteria 1711
53 Ga0068859_100469392 3300005617 Bacteria 1354
54 Ga0081540_1043545 3300005983 Bacteria 2301
55 Ga0081539_10029930 3300005985 Bacteria 3391
56 Ga0070717_10061398 3300006028 Bacteria 3114
57 Ga0070717_10184204 3300006028 Bacteria 1821
58 Ga0070716_100377991 3300006173 Bacteria 1012
59 Ga0070712_100108069 3300006175 Bacteria 2071
60 Ga0070712_100216795 3300006175 Bacteria 1513
61 Ga0075431_100020243 3300006847 Bacteria 6797
62 Ga0075434_100274633 3300006871 Bacteria 1705
63 Ga0075429_100026268 3300006880 Bacteria 5054
64 Ga0075436_100191400 3300006914 Bacteria 1447
65 Ga0097620_100469344 3300006931 Bacteria 1354
66 Ga0099795_10019424 3300007788 Bacteria 2199
67 Ga0105240_10008279 3300009093 Bacteria 14885
68 Ga0105240_10265649 3300009093 Bacteria 1978
69 Ga0105240_10546307 3300009093 Bacteria 1282
70 Ga0111539_10144272 3300009094 Bacteria 2787
71 Ga0105243_10273747 3300009148 Bacteria 1517
72 Ga0105241_10259391 3300009174 Bacteria 1477
73 Ga0105248_10003850 3300009177 Bacteria 16609
74 Ga0105248_10006646 3300009177 Bacteria 12683
75 Ga0105248_10148168 3300009177 Bacteria 2648
76 Ga0105238_10012413 3300009551 Bacteria 8592
77 Ga0105249_10005913 3300009553 Bacteria 10596
78 Ga0105249_10115351 3300009553 Bacteria 2545
79 Ga0099796_10003711 3300010159 Bacteria 3589
80 Ga0099796_10007605 3300010159 Bacteria 2841
81 Ga0105239_10191372 3300010375 Bacteria 2290
82 Ga0105239_10365391 3300010375 Bacteria 1630
83 Ga0157371_10014187 3300013102 Bacteria 6024
84 Ga0157371_10049630 3300013102 Bacteria 2981
85 Ga0157371_10171334 3300013102 Bacteria 1551
86 Ga0157370_10092433 3300013104 Bacteria 2840
87 Ga0157370_10251401 3300013104 Bacteria 1635
88 Ga0157369_10006472 3300013105 Bacteria 13574
89 Ga0157369_10012121 3300013105 Bacteria 9786
90 Ga0157369_10439833 3300013105 Bacteria 1351
91 Ga0157374_10858442 3300013296 Bacteria 925
92 Ga0157372_10012633 3300013307 Bacteria 8996
93 Ga0157372_10071559 3300013307 Bacteria 3905
94 Ga0157372_10090086 3300013307 Bacteria 3486
95 Ga0157372_10483828 3300013307 Bacteria 1443
96 Ga0157375_10551869 3300013308 Bacteria 1314
97 Ga0163163_10238621 3300014325 Bacteria 1867
98 Ga0182008_10122515 3300014497 Bacteria 1293
99 Ga0182008_10159706 3300014497 Bacteria 1134
100 Ga0183365_10004 3300015684 Bacteria 333304
101 Ga0163161_10009039 3300017792 Bacteria 6891
102 Ga0163161_10170486 3300017792 Bacteria 1664
103 Ga0163161_10326451 3300017792 Bacteria 1214
104 Ga0213872_10075777 3300021361 Bacteria 1514
105 Ga0213876_10152296 3300021384 Bacteria 1230
106 Ga0213875_10003695 3300021388 Bacteria 8629
107 Ga0213875_10004523 3300021388 Bacteria 7612
108 Ga0213875_10041612 3300021388 Bacteria 2162
109 Ga0213875_10143809 3300021388 Bacteria 1117
110 Ga0207427_101696 3300025231 Bacteria 7320
111 Ga0209026_1002398 3300025250 Bacteria 7069
112 Ga0209233_1000041 3300025261 Bacteria 515463
113 Ga0207692_10056190 3300025898 Bacteria 2018
114 Ga0207692_10066438 3300025898 Bacteria 1885
115 Ga0207680_10120041 3300025903 Bacteria 1718
116 Ga0207647_10001047 3300025904 Bacteria 21386
117 Ga0207647_10003424 3300025904 Bacteria 11898
118 Ga0207647_10049886 3300025904 Bacteria 2594
119 Ga0207705_10091729 3300025909 Bacteria 2225
120 Ga0207684_10095676 3300025910 Bacteria 2534
121 Ga0207654_10149341 3300025911 Bacteria 1498
122 Ga0207707_10088392 3300025912 Bacteria 2707
123 Ga0207695_10033381 3300025913 Bacteria 5614
124 Ga0207695_10205448 3300025913 Bacteria 1882
125 Ga0207695_10313902 3300025913 Bacteria 1457
126 Ga0207693_10002952 3300025915 Bacteria 14722
127 Ga0207693_10109549 3300025915 Bacteria 2166
128 Ga0207693_10167985 3300025915 Bacteria 1727
129 Ga0207663_10050910 3300025916 Bacteria 2576
130 Ga0207663_10212543 3300025916 Bacteria 1403
131 Ga0207657_10009428 3300025919 Bacteria 9811
132 Ga0207649_10079776 3300025920 Bacteria 2115
133 Ga0207646_10023613 3300025922 Bacteria 5646
134 Ga0207681_10015211 3300025923 Bacteria 4798
135 Ga0207694_10061359 3300025924 Bacteria 2926
136 Ga0207700_10593114 3300025928 Bacteria 986
137 Ga0207664_10218228 3300025929 Bacteria 1653
138 Ga0207644_10017297 3300025931 Bacteria 4867
139 Ga0207644_10317540 3300025931 Bacteria 1259
140 Ga0207690_10012452 3300025932 Bacteria 5087
141 Ga0207706_10002790 3300025933 Bacteria 16968
142 Ga0207706_10015025 3300025933 Bacteria 7009
143 Ga0207669_10208140 3300025937 Bacteria 1425
144 Ga0207665_10049385 3300025939 Bacteria 2826
145 Ga0207665_10076885 3300025939 Bacteria 2290
146 Ga0207711_10004542 3300025941 Bacteria 11813
147 Ga0207711_10020670 3300025941 Bacteria 5492
148 Ga0207711_10026097 3300025941 Bacteria 4901
149 Ga0207667_10330521 3300025949 Bacteria 1556
150 Ga0207712_10010198 3300025961 Bacteria 5959
151 Ga0207640_10001209 3300025981 Bacteria 14089
152 Ga0207640_10024060 3300025981 Bacteria 3669
153 Ga0207703_10177650 3300026035 Bacteria 1877
154 Ga0207639_10128211 3300026041 Bacteria 2096
155 Ga0207639_10257120 3300026041 Bacteria 1526
156 Ga0207678_10181313 3300026067 Bacteria 1798
157 Ga0207702_10020566 3300026078 Bacteria 5464
158 Ga0207702_10307452 3300026078 Bacteria 1506
159 Ga0207676_10000331 3300026095 Bacteria 40710
160 Ga0207674_10022571 3300026116 Bacteria 6756
161 Ga0207698_10001353 3300026142 Bacteria 14282
162 Ga0207698_10055229 3300026142 Bacteria 3059
163 Ga0265327_10000422 3300031251 Bacteria 77471
164 Ga0316575_10035334 3300031665 Bacteria 1964
165 Ga0307412_10000717 3300031911 Bacteria 19141
166 Ga0307412_10016364 3300031911 Bacteria 4416
167 Ga0316583_10016156 3300032133 Bacteria 2687
168 Ga0316580_10027412 3300032139 Bacteria 1761
169 Ga0373956_0071423 3300035119 Bacteria 1584
170 Ga0373947_0192795 3300035725 Bacteria 1330
171 Ga0373937_0066351 3300036401 Bacteria 3323
172 Ga0373937_0468153 3300036401 Bacteria 1197
173 Ga0373937_0542649 3300036401 Bacteria 1104
174 Ga0316584_0066922 3300036712 Bacteria 2692
175 Ga0373925_0052191 3300037068 Bacteria 3055
176 Ga0395899_0003340 3300037312 Bacteria 12722
177 Ga0395900_0036665 3300037418 Bacteria 5055
178 Ga0395900_0083441 3300037418 Bacteria 3283
179 Ga0395900_0119307 3300037418 Bacteria 2707
180 Ga0395900_0145084 3300037418 Bacteria 2427
181 Ga0395898_0331731 3300037466 Bacteria 1450
182 Ga0395905_0413458 3300037471 Bacteria 1244
183 Ga0395905_0435590 3300037471 Bacteria 1208
184 Ga0316581_0082911 3300037588 Bacteria 986
185 Ga0436364_0087450 3300037853 Bacteria 1239
186 Ga0436364_0207585 3300037853 Bacteria 136246
187 Ga0436364_0379648 3300037853 Bacteria 1745
188 Ga0436364_0526834 3300037853 Bacteria 2506
189 Ga0436364_0817861 3300037853 Bacteria 12212
190 Ga0436364_1070807 3300037853 Bacteria 80692
191 Ga0395901_0347064 3300038443 Bacteria 1532
192 Ga0436365_1191072 3300039437 Bacteria 2201
193 Ga0436360_0140656 3300039438 Bacteria 1452
194 Ga0436360_1278880 3300039438 Bacteria 1830
195 Ga0436361_0502621 3300039447 Bacteria 3607
196 Ga0436363_0262836 3300039450 Bacteria 2406
197 Ga0436362_0445634 3300039453 Bacteria 2414
198 Ga0436362_0889779 3300039453 Bacteria 1635
199 Ga0466972_0000458 3300044658 Bacteria 20809
200 Ga0466972_0005692 3300044658 Bacteria 6247
201 Ga0466966_0000052 3300044684 Bacteria 88472
202 Ga0466961_0019274 3300044693 Bacteria 4390
203 Ga0466963_0014144 3300044694 Bacteria 4916
204 Ga0466964_0024161 3300044706 Bacteria 2366
205 Ga0466964_0121682 3300044706 Bacteria 1177
206 Ga0466970_0155865 3300044765 Bacteria 1262
207 Ga0466960_0001880 3300044901 Bacteria 7710
208 Ga0466959_0083239 3300045049 Bacteria 2304
209 Ga0466959_0311485 3300045049 Bacteria 1077
210 Ga0466967_0003213 3300045976 Bacteria 10558
211 Ga0466967_0049835 3300045976 Bacteria 3665
212 Ga0495627_000260 3300046453 Bacteria 54170
213 Ga0495627_000295 3300046453 Bacteria 49392
214 Ga0495638_0039188 3300046460 Bacteria 3009
215 Ga0495638_0089539 3300046460 Bacteria 1856
216 Ga0495650_0001200 3300046471 Bacteria 27305
217 Ga0495583_0000023 3300046506 Bacteria 280019
218 Ga0495610_0000034 3300046512 Bacteria 201408
219 Ga0495620_0052963 3300046515 Bacteria 1720
220 Ga0495631_0075357 3300046518 Bacteria 1456
221 Ga0495632_0000370 3300046519 Bacteria 42724
222 Ga0495648_0006463 3300046524 Bacteria 9563
223 Ga0495586_0120407 3300046535 Bacteria 1466
224 Ga0495633_0008652 3300046558 Bacteria 5715
225 Ga0495667_0009790 3300046559 Bacteria 6492
226 Ga0495634_0145171 3300046642 Bacteria 1504
227 Ga0495635_0026765 3300046663 Bacteria 4011
228 Ga0495661_0124615 3300046665 Bacteria 1419
229 Ga0495599_0104917 3300046678 Bacteria 1761
230 Ga0495670_0004750 3300046691 Bacteria 6673
231 Ga0495671_0000042 3300046692 Bacteria 165201
232 Ga0495671_0024350 3300046692 Bacteria 3153
233 Ga0495649_0071635 3300046694 Bacteria 1858
234 Ga0495600_0057122 3300046809 Bacteria 2550
235 Ga0495680_0030578 3300047322 Bacteria 4396
236 Ga0495673_0000111 3300047469 Bacteria 164974
237 Ga0495673_0075225 3300047469 Bacteria 1411
238 Ga0495681_0000049 3300047470 Bacteria 109650
239 Ga0495686_0003249 3300047472 Bacteria 14263
240 Ga0495686_0179705 3300047472 Bacteria 1226
241 Ga0496102_0000261 3300048905 Bacteria 67440
242 Ga0496103_0000052 3300048906 Bacteria 149437
243 Ga0496104_0002094 3300048907 Bacteria 17320
244 Ga0496104_0059741 3300048907 Bacteria 3610
245 Ga0496105_0000173 3300048908 Bacteria 42940
246 Ga0496108_0028152 3300048911 Bacteria 4648
247 Ga0496110_0006960 3300048913 Bacteria 8998
248 Ga0496110_0084811 3300048913 Bacteria 2828
249 Ga0496111_0015746 3300048914 Bacteria 5200
250 Ga0496111_0024577 3300048914 Bacteria 4244
251 Ga0496112_0718730 3300048915 Bacteria 926
252 Ga0496114_0001140 3300048917 Bacteria 20074
253 Ga0496115_0000086 3300048918 Bacteria 86625
254 Ga0496116_0002258 3300048919 Bacteria 20437
255 Ga0496117_0000141 3300048920 Bacteria 158041
256 Ga0496117_0022591 3300048920 Bacteria 5041
257 Ga0496117_0070508 3300048920 Bacteria 2347
258 Ga0496118_0000103 3300048921 Bacteria 158099
259 Ga0496118_0004463 3300048921 Bacteria 16596
260 Ga0496118_0008806 3300048921 Bacteria 10341
261 Ga0496119_0002487 3300048922 Bacteria 20150
262 Ga0496120_0006731 3300048923 Bacteria 8737
263 Ga0496120_0040302 3300048923 Bacteria 2746
264 Ga0496121_0000156 3300048924 Bacteria 149376
265 Ga0496121_0000997 3300048924 Bacteria 50601
266 Ga0496121_0011435 3300048924 Bacteria 9855
267 Ga0496122_0001355 3300048925 Bacteria 39961
268 Ga0496122_0006144 3300048925 Bacteria 13966
269 Ga0496123_0002426 3300048926 Bacteria 23191
270 Ga0496123_0012296 3300048926 Bacteria 7314
271 Ga0496123_0015746 3300048926 Bacteria 6183
272 Ga0496123_0114992 3300048926 Bacteria 1528
273 Ga0496124_0000041 3300048927 Bacteria 303887
274 Ga0496124_0000325 3300048927 Bacteria 88310
275 Ga0496124_0009107 3300048927 Bacteria 10264
276 Ga0496124_0056922 3300048927 Bacteria 3296
277 Ga0496124_0057234 3300048927 Bacteria 3286
278 Ga0496125_0001258 3300048928 Bacteria 37779
279 Ga0496125_0169069 3300048928 Bacteria 1473
280 Ga0496125_0188349 3300048928 Bacteria 1365
281 Ga0496126_0000155 3300048929 Bacteria 158816
282 Ga0496126_0051469 3300048929 Bacteria 3749
283 Ga0495682_0008927 3300049460 Bacteria 3932
284 Ga0501034_0182502 3300049571 Bacteria 2063
285 Ga0501039_0362955 3300049575 Bacteria 1138
286 Ga0501043_0112393 3300049579 Bacteria 2139
287 Ga0501044_0070176 3300049823 Bacteria 3565
288 nmdc:mga09592_5053_c1 3300050508 Bacteria 10704
289 nmdc:mga06r32_3189_c1 3300050510 Bacteria 14690
290 nmdc:mga08y16_465714_c1 3300050511 Bacteria 1287
291 nmdc:mga08y16_555100_c1 3300050511 Bacteria 1162
292 nmdc:mga0n895_287077_c1 3300050512 Bacteria 1668
293 Ga0495601_0012241 3300053077 Bacteria 5143
294 Ga0500635_0011408 3300053080 Bacteria 2525
295 Ga0495595_0102938 3300053084 Bacteria 1379
296 Ga0495619_0029740 3300053085 Bacteria 3531
297 Ga0500555_000042 3300053103 Bacteria 65300
298 Ga0500559_0008943 3300053136 Bacteria 4359
299 Ga0500559_0036112 3300053136 Bacteria 2136
300 2600203254 2599185354 Bacteria 4398675
301 2753766780 2751185897 Bacteria 5322941
302 2842694139 2842694124 Bacteria 4063419
303 2848297902 2848297114 Bacteria 3608511
304 2879164039 2879163058 Bacteria 4223965
305 2928968834 2928968154 Bacteria 4633371
306 641645909 641522639 Bacteria 7737025
307 8054563913 8054563764 Bacteria 5592885
308 Ga0495583_0000087
309 JGI24736J21556_1001707
310 JGI24739J22299_10001690
311 JGI24737J22298_10024566
312 JGI24735J21928_10001443
313 JGI24738J21930_10000855
314 JGI24738J21930_10001097
315 JGI25165J46597_1000050
316 Ga0065704_10091734
317 Ga0070658_10263762
318 Ga0070666_10071700
319 Ga0070660_100038427
320 Ga0070661_100007636
321 Ga0070661_100463060
322 Ga0070692_10253258
323 Ga0070669_100086111
324 Ga0070669_100371459
325 Ga0070675_100213994
326 Ga0070671_100005999
327 Ga0070671_100021866
328 Ga0070671_100148093
329 Ga0070671_100336553
330 Ga0070674_100035911
331 Ga0070659_100020388
332 Ga0070667_100436606
333 Ga0070709_10115228
334 Ga0070714_100038966
335 Ga0070713_100013944
336 Ga0070710_10301021
337 Ga0070711_100033797
338 Ga0070711_100415893
339 Ga0070708_100114036
340 Ga0070663_100055573
341 Ga0070663_100101921
342 Ga0070663_100377479
343 Ga0070662_100001493
344 Ga0070662_100004533
345 Ga0070681_10157297
346 Ga0070685_10336375
347 Ga0070706_100113575
348 Ga0070707_100014382
349 Ga0070698_100168792
350 Ga0070698_100229983
351 Ga0070699_100043855
352 Ga0070697_100114491
353 Ga0070697_100370473
354 Ga0068854_100007205
355 Ga0068854_100022587
356 Ga0068856_100002722
357 Ga0068852_100000302
358 Ga0068852_100081512
359 Ga0068852_100246128
360 Ga0068859_100469392
361 Ga0081540_1043545
362 Ga0081539_10029930
363 Ga0070717_10061398
364 Ga0070717_10184204
365 Ga0070716_100377991
366 Ga0070712_100108069
367 Ga0070712_100216795
368 Ga0075431_100020243
369 Ga0075434_100274633
370 Ga0075429_100026268
371 Ga0075436_100191400
372 Ga0097620_100469344
373 Ga0099795_10019424
374 Ga0105240_10008279
375 Ga0105240_10265649
376 Ga0105240_10546307
377 Ga0111539_10144272
378 Ga0105243_10273747
379 Ga0105241_10259391
380 Ga0105248_10003850
381 Ga0105248_10006646
382 Ga0105248_10148168
383 Ga0105238_10012413
384 Ga0105249_10005913
385 Ga0105249_10115351
386 Ga0099796_10003711
387 Ga0099796_10007605
388 Ga0105239_10191372
389 Ga0105239_10365391
390 Ga0157371_10014187
391 Ga0157371_10049630
392 Ga0157371_10171334
393 Ga0157370_10092433
394 Ga0157370_10251401
395 Ga0157369_10006472
396 Ga0157369_10012121
397 Ga0157369_10439833
398 Ga0157374_10858442
399 Ga0157372_10012633
400 Ga0157372_10071559
401 Ga0157372_10090086
402 Ga0157372_10483828
403 Ga0157375_10551869
404 Ga0163163_10238621
405 Ga0182008_10122515
406 Ga0182008_10159706
407 Ga0183365_10004
408 Ga0163161_10009039
409 Ga0163161_10170486
410 Ga0163161_10326451
411 Ga0213872_10075777
412 Ga0213876_10152296
413 Ga0213875_10003695
414 Ga0213875_10004523
415 Ga0213875_10041612
416 Ga0213875_10143809
417 Ga0207427_101696
418 Ga0209026_1002398
419 Ga0209233_1000041
420 Ga0207692_10056190
421 Ga0207692_10066438
422 Ga0207680_10120041
423 Ga0207647_10001047
424 Ga0207647_10003424
425 Ga0207647_10049886
426 Ga0207705_10091729
427 Ga0207684_10095676
428 Ga0207654_10149341
429 Ga0207707_10088392
430 Ga0207695_10033381
431 Ga0207695_10205448
432 Ga0207695_10313902
433 Ga0207693_10002952
434 Ga0207693_10109549
435 Ga0207693_10167985
436 Ga0207663_10050910
437 Ga0207663_10212543
438 Ga0207657_10009428
439 Ga0207649_10079776
440 Ga0207646_10023613
441 Ga0207681_10015211
442 Ga0207694_10061359
443 Ga0207700_10593114
444 Ga0207664_10218228
445 Ga0207644_10017297
446 Ga0207644_10317540
447 Ga0207690_10012452
448 Ga0207706_10002790
449 Ga0207706_10015025
450 Ga0207669_10208140
451 Ga0207665_10049385
452 Ga0207665_10076885
453 Ga0207711_10004542
454 Ga0207711_10020670
455 Ga0207711_10026097
456 Ga0207667_10330521
457 Ga0207712_10010198
458 Ga0207640_10001209
459 Ga0207640_10024060
460 Ga0207703_10177650
461 Ga0207639_10128211
462 Ga0207639_10257120
463 Ga0207678_10181313
464 Ga0207702_10020566
465 Ga0207702_10307452
466 Ga0207676_10000331
467 Ga0207674_10022571
468 Ga0207698_10001353
469 Ga0207698_10055229
470 Ga0265327_10000422
471 Ga0316575_10035334
472 Ga0307412_10000717
473 Ga0307412_10016364
474 Ga0316583_10016156
475 Ga0316580_10027412
476 Ga0373956_0071423
477 Ga0373947_0192795
478 Ga0373937_0066351
479 Ga0373937_0468153
480 Ga0373937_0542649
481 Ga0316584_0066922
482 Ga0373925_0052191
483 Ga0395899_0003340
484 Ga0395900_0036665
485 Ga0395900_0083441
486 Ga0395900_0119307
487 Ga0395900_0145084
488 Ga0395898_0331731
489 Ga0395905_0413458
490 Ga0395905_0435590
491 Ga0316581_0082911
492 Ga0436364_0087450
493 Ga0436364_0207585
494 Ga0436364_0379648
495 Ga0436364_0526834
496 Ga0436364_0817861
497 Ga0436364_1070807
498 Ga0395901_0347064
499 Ga0436365_1191072
500 Ga0436360_0140656
501 Ga0436360_1278880
502 Ga0436361_0502621
503 Ga0436363_0262836
504 Ga0436362_0445634
505 Ga0436362_0889779
506 Ga0466972_0000458
507 Ga0466972_0005692
508 Ga0466966_0000052
509 Ga0466961_0019274
510 Ga0466963_0014144
511 Ga0466964_0024161
512 Ga0466964_0121682
513 Ga0466970_0155865
514 Ga0466960_0001880
515 Ga0466959_0083239
516 Ga0466959_0311485
517 Ga0466967_0003213
518 Ga0466967_0049835
519 Ga0495627_000260
520 Ga0495627_000295
521 Ga0495638_0039188
522 Ga0495638_0089539
523 Ga0495650_0001200
524 Ga0495583_0000023
525 Ga0495610_0000034
526 Ga0495620_0052963
527 Ga0495631_0075357
528 Ga0495632_0000370
529 Ga0495648_0006463
530 Ga0495586_0120407
531 Ga0495633_0008652
532 Ga0495667_0009790
533 Ga0495634_0145171
534 Ga0495635_0026765
535 Ga0495661_0124615
536 Ga0495599_0104917
537 Ga0495670_0004750
538 Ga0495671_0000042
539 Ga0495671_0024350
540 Ga0495649_0071635
541 Ga0495600_0057122
542 Ga0495680_0030578
543 Ga0495673_0000111
544 Ga0495673_0075225
545 Ga0495681_0000049
546 Ga0495686_0003249
547 Ga0495686_0179705
548 Ga0496102_0000261
549 Ga0496103_0000052
550 Ga0496104_0002094
551 Ga0496104_0059741
552 Ga0496105_0000173
553 Ga0496108_0028152
554 Ga0496110_0006960
555 Ga0496110_0084811
556 Ga0496111_0015746
557 Ga0496111_0024577
558 Ga0496112_0718730
559 Ga0496114_0001140
560 Ga0496115_0000086
561 Ga0496116_0002258
562 Ga0496117_0000141
563 Ga0496117_0022591
564 Ga0496117_0070508
565 Ga0496118_0000103
566 Ga0496118_0004463
567 Ga0496118_0008806
568 Ga0496119_0002487
569 Ga0496120_0006731
570 Ga0496120_0040302
571 Ga0496121_0000156
572 Ga0496121_0000997
573 Ga0496121_0011435
574 Ga0496122_0001355
575 Ga0496122_0006144
576 Ga0496123_0002426
577 Ga0496123_0012296
578 Ga0496123_0015746
579 Ga0496123_0114992
580 Ga0496124_0000041
581 Ga0496124_0000325
582 Ga0496124_0009107
583 Ga0496124_0056922
584 Ga0496124_0057234
585 Ga0496125_0001258
586 Ga0496125_0169069
587 Ga0496125_0188349
588 Ga0496126_0000155
589 Ga0496126_0051469
590 Ga0495682_0008927
591 Ga0501034_0182502
592 Ga0501039_0362955
593 Ga0501043_0112393
594 Ga0501044_0070176
595 nmdc:mga09592_5053_c1
596 nmdc:mga06r32_3189_c1
597 nmdc:mga08y16_465714_c1
598 nmdc:mga08y16_555100_c1
599 nmdc:mga0n895_287077_c1
600 Ga0495601_0012241
601 Ga0500635_0011408
602 Ga0495595_0102938
603 Ga0495619_0029740
604 Ga0500555_000042
605 Ga0500559_0008943
606 Ga0500559_0036112
607 2600203254
608 2753766780
609 2842694139
610 2848297902
611 2879164039
612 2928968834
613 641645909
614 8054563913

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01557

FAA_hydrolase

Fumarylacetoacetate (FAA) hydrolase family

79

286

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
8gst-assembly2.cif.gz_D crystal structure of l-2,4-diketo-3-deoxyrhamnonate hydrolase from sphingomonas sp. (pyruvate bound-form) 0.9841 1 282
8gst-assembly2.cif.gz_D crystal structure of l-2,4-diketo-3-deoxyrhamnonate hydrolase from sphingomonas sp. (pyruvate bound-form) 0.96 1 282
1saw-assembly1.cif.gz_A x-ray structure of homo sapiens protein flj36880 0.943 72 283
6fog-assembly4.cif.gz_D x-ray structure of homo sapiens fumarylacetoacetate hydrolase domain containing protein 1 (fahd1) in complex with inhibitor oxalate at 1.94a resolution. 0.9319 72 282
1wzo-assembly1.cif.gz_C crystal structure of the hpce from thermus thermophilus hb8 0.9315 1 281
ID Description Score Start End Superfamily
af_Q9VU50_128_337_3.90.850.10 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.9771 68 280 3.90.850.10
af_A0A1D8PI10_75_291_3.90.850.10 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.9688 70 279 3.90.850.10
af_Q2FZT4_90_300_3.90.850.10 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.9641 71 279 3.90.850.10
af_Q9VU50_128_337_3.90.850.10 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.9587 68 280 3.90.850.10
af_Q9VDE2_1_220_3.90.850.10 Alpha Beta;Alpha-Beta Complex;Fumarylacetoacetate hydrolase; domain 2;Fumarylacetoacetase-like, C-terminal domain 0.9531 68 281 3.90.850.10
ID Description Score Start End GO Terms
AF-A0A520PBK8-F1-model_v4 FAA hydrolase family protein 0.9957 62 282 GO:0016787
GO:0044281
AF-A0A7W9BRX2-F1-model_v4 2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase in catechol pathway 0.9951 1 282 GO:0003824
GO:0044281
AF-A0A7C7BQ93-F1-model_v4 deleted 0.9946 103 281
AF-A0A2U0UTE1-F1-model_v4 deleted 0.9945 1 282
AF-A0A832YD99-F1-model_v4 FAA hydrolase family protein 0.9941 69 281 GO:0016787
GO:0044281

Map