F399137

General Info

Members Datasets Scaffolds Average Seq Length
307 179 614 329

Family's Representative Sequence

Representative Sequence 3300006844|Ga0075428_100000123|Ga0075428_10000012356
Length 390
Sequence MSRLADLDAFDTDHRRCGDLDGGVEGLVVWIACECGANIARRAERATHLTPTVDPPYRPGMDRRRFLLTSLASALATPLAGEAQQTGQMRRIAVLMGLPESDPAQARVAAFRKGLQTLGWEEGRNVRIDIRWTTTSDAPAMQRFAKELVALQPDLILSHNTPTTATLLQHTRTIPIVFAVVSDPIGSGFVASLPRPGGNVTGFTNIEPTMAGKWLELLKQIAPRVARVAFLFNPATAPYAEYYLRPLKAAAAAVAMDAIPAPVHNTSELESAIAAQARTPHGGLVVMTDSFLVTHRAQITALAARYRLPTVYPFRDFIELGGLLFYGNDLLDSFQRAATYADRILRGATPNDLPVQAPVKFELVINLKTARALGLTIPPSLLARADHVIE

Samples

Sample ID Description Type Environment
1 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
2 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
6 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
7 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
8 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
23 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
28 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
29 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
30 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
37 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
38 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
39 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
40 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
41 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
42 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
46 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
47 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
48 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
49 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
50 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
52 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
59 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
60 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
61 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
62 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
63 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
64 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
65 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
66 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
67 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
68 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
69 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
70 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
71 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
72 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
73 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
74 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
75 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
76 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
108 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
111 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
112 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
113 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
114 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
115 3300035114 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_3 Metagenome Rhizosphere
116 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
117 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
118 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
119 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
120 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
121 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
122 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
123 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
124 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
125 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
126 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
127 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
128 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
129 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
130 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
131 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
132 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
133 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
134 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
135 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
136 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
137 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
138 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
139 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
140 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
141 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
142 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
143 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
144 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
145 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
146 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
147 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
148 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
149 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
150 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
151 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
152 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
153 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
154 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
155 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
156 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
157 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
158 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
159 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
160 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
161 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
162 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
163 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
164 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
165 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
166 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
167 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
168 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
169 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
170 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
171 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
172 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
173 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
174 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
175 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
176 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
177 2874620515 Bradyrhizobium nanningense CCBAU 53390 Isolate Unclassified
178 2885374607 Bradyrhizobium sp. NAS96.2 Isolate Unclassified
179 2904666416 Bradyrhizobium nanningense CCBAU 51757 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.02
Metatranscriptomes 0
Isolates 0.98

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.3
Nodule 0
Rhizoplane 21.17
Rhizosphere 75.57
Stem 0
Stem Tuber 0
Unclassified 12.7

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075428_100000123 3300006844 Bacteria 66826
2 Ga0070690_100275546 3300005330 Bacteria 1198
3 Ga0070680_100052009 3300005336 Bacteria 3344
4 Ga0070680_100233971 3300005336 Bacteria 1552
5 Ga0068868_100106438 3300005338 Bacteria 2275
6 Ga0068868_100129432 3300005338 Bacteria 2065
7 Ga0070671_100018010 3300005355 Bacteria 5732
8 Ga0070667_100029579 3300005367 Unclassified 4566
9 Ga0070703_10041195 3300005406 Bacteria 1439
10 Ga0070709_10008631 3300005434 Bacteria 5604
11 Ga0070709_10159981 3300005434 Bacteria 1565
12 Ga0070714_100054401 3300005435 Bacteria 3419
13 Ga0070713_100052835 3300005436 Bacteria 3365
14 Ga0070710_10002405 3300005437 Bacteria 8863
15 Ga0070711_100006614 3300005439 Bacteria 7001
16 Ga0070705_100021786 3300005440 Bacteria 3413
17 Ga0070694_100057721 3300005444 Bacteria 2639
18 Ga0070708_100171446 3300005445 Unclassified 2026
19 Ga0070708_100340436 3300005445 Bacteria 1413
20 Ga0070681_10011530 3300005458 Bacteria 8749
21 Ga0068867_100201330 3300005459 Bacteria 1594
22 Ga0070706_100141234 3300005467 Bacteria 2248
23 Ga0070707_100096311 3300005468 Bacteria 2866
24 Ga0070707_100369771 3300005468 Bacteria 1393
25 Ga0070698_100029680 3300005471 Bacteria 5677
26 Ga0070698_100468179 3300005471 Unclassified 1196
27 Ga0070699_100017317 3300005518 Bacteria 6188
28 Ga0070699_100035681 3300005518 Bacteria 4298
29 Ga0070699_100045971 3300005518 Bacteria 3778
30 Ga0070699_100132440 3300005518 Bacteria 2198
31 Ga0070699_100138756 3300005518 Bacteria 2145
32 Ga0070696_100176922 3300005546 Unclassified 1581
33 Ga0070704_100032965 3300005549 Bacteria 3499
34 Ga0068855_100261328 3300005563 Bacteria 1928
35 Ga0070664_100055102 3300005564 Bacteria 3374
36 Ga0068857_100197779 3300005577 Bacteria 1832
37 Ga0068856_100236253 3300005614 Unclassified 1843
38 Ga0068859_100003068 3300005617 Bacteria 16938
39 Ga0068861_100109745 3300005719 Bacteria 2209
40 Ga0068870_10065642 3300005840 Bacteria 1964
41 Ga0068863_100433974 3300005841 Unclassified 1288
42 Ga0068858_100010172 3300005842 Bacteria 8929
43 Ga0068860_100091983 3300005843 Bacteria 2890
44 Ga0068860_100383749 3300005843 Bacteria 1387
45 Ga0068862_100026232 3300005844 Bacteria 4898
46 Ga0068862_100027222 3300005844 Unclassified 4811
47 Ga0081455_10015421 3300005937 Bacteria 7425
48 Ga0081455_10046848 3300005937 Bacteria 3747
49 Ga0081538_10051872 3300005981 Bacteria 2457
50 Ga0081540_1089093 3300005983 Unclassified 1362
51 Ga0070717_10084113 3300006028 Bacteria 2676
52 Ga0070717_10101322 3300006028 Bacteria 2445
53 Ga0075365_10038527 3300006038 Bacteria 3108
54 Ga0070715_10036078 3300006163 Bacteria 2037
55 Ga0070716_100029544 3300006173 Bacteria 2965
56 Ga0070712_100001285 3300006175 Bacteria 15162
57 Ga0070712_100197147 3300006175 Bacteria 1579
58 Ga0075428_100039382 3300006844 Bacteria 5201
59 Ga0075430_100004820 3300006846 Bacteria 11355
60 Ga0075430_100010420 3300006846 Bacteria 7869
61 Ga0075430_100170541 3300006846 Bacteria 1810
62 Ga0075431_100131741 3300006847 Unclassified 2578
63 Ga0075431_100261056 3300006847 Unclassified 1758
64 Ga0075433_10025617 3300006852 Bacteria 4988
65 Ga0075433_10038602 3300006852 Bacteria 4125
66 Ga0075433_10139172 3300006852 Bacteria 2157
67 Ga0075434_100031446 3300006871 Bacteria 5233
68 Ga0075434_100031981 3300006871 Bacteria 5187
69 Ga0075434_100124145 3300006871 Unclassified 2598
70 Ga0075429_100005499 3300006880 Bacteria 10908
71 Ga0075429_100109423 3300006880 Unclassified 2415
72 Ga0068865_100156491 3300006881 Bacteria 1734
73 Ga0075436_100069742 3300006914 Unclassified 2429
74 Ga0097620_100003068 3300006931 Bacteria 16938
75 Ga0075435_100021169 3300007076 Bacteria 4997
76 Ga0075435_100028065 3300007076 Bacteria 4411
77 Ga0105240_10092084 3300009093 Bacteria 3702
78 Ga0111539_10023273 3300009094 Bacteria 7610
79 Ga0111539_10144205 3300009094 Bacteria 2788
80 Ga0111539_10219118 3300009094 Bacteria 2217
81 Ga0111539_10372403 3300009094 Bacteria 1662
82 Ga0111539_10583135 3300009094 Bacteria 1302
83 Ga0111539_10587894 3300009094 Bacteria 1296
84 Ga0105245_10003945 3300009098 Bacteria 13199
85 Ga0105247_10045597 3300009101 Bacteria 2690
86 Ga0114129_10050753 3300009147 Bacteria 5826
87 Ga0114129_10361388 3300009147 Bacteria 1921
88 Ga0114129_10373045 3300009147 Unclassified 1885
89 Ga0114129_10457452 3300009147 Bacteria 1673
90 Ga0114129_10687304 3300009147 Bacteria 1316
91 Ga0105243_10012648 3300009148 Bacteria 6375
92 Ga0105241_10082794 3300009174 Bacteria 2516
93 Ga0105242_10083701 3300009176 Bacteria 2672
94 Ga0105242_10330335 3300009176 Bacteria 1402
95 Ga0105248_10031764 3300009177 Bacteria 5900
96 Ga0105248_10064380 3300009177 Bacteria 4116
97 Ga0105248_10130864 3300009177 Bacteria 2831
98 Ga0105238_10154032 3300009551 Bacteria 2273
99 Ga0105238_10288827 3300009551 Bacteria 1622
100 Ga0105249_10404616 3300009553 Unclassified 1396
101 Ga0105239_10048988 3300010375 Bacteria 4632
102 Ga0105239_10169353 3300010375 Bacteria 2442
103 Ga0105246_10010382 3300011119 Bacteria 5761
104 Ga0157378_10426329 3300013297 Bacteria 1312
105 Ga0157378_10481534 3300013297 Bacteria 1236
106 Ga0157372_10263259 3300013307 Bacteria 2002
107 Ga0157375_10001986 3300013308 Bacteria 17663
108 Ga0163163_10018168 3300014325 Bacteria 6576
109 Ga0163163_10026521 3300014325 Bacteria 5540
110 Ga0157380_10516714 3300014326 Bacteria 1164
111 Ga0157377_10051418 3300014745 Bacteria 2324
112 Ga0157379_10008435 3300014968 Bacteria 8960
113 Ga0157379_10063638 3300014968 Bacteria 3297
114 Ga0157379_10289035 3300014968 Bacteria 1493
115 Ga0157376_10035546 3300014969 Bacteria 4031
116 Ga0157376_10499814 3300014969 Bacteria 1195
117 Ga0163161_10311021 3300017792 Bacteria 1243
118 Ga0213874_10016114 3300021377 Unclassified 1984
119 Ga0213871_10013001 3300021441 Bacteria 1946
120 Ga0207697_10050058 3300025315 Bacteria 1725
121 Ga0207685_10012968 3300025905 Bacteria 2563
122 Ga0207699_10029484 3300025906 Bacteria 3060
123 Ga0207684_10121776 3300025910 Bacteria 2236
124 Ga0207654_10065523 3300025911 Bacteria 2139
125 Ga0207707_10079852 3300025912 Bacteria 2856
126 Ga0207695_10108243 3300025913 Bacteria 2764
127 Ga0207693_10003920 3300025915 Bacteria 12671
128 Ga0207693_10047953 3300025915 Bacteria 3355
129 Ga0207663_10000270 3300025916 Bacteria 22494
130 Ga0207663_10092779 3300025916 Bacteria 2008
131 Ga0207660_10032273 3300025917 Bacteria 3614
132 Ga0207694_10180911 3300025924 Bacteria 1710
133 Ga0207687_10018920 3300025927 Bacteria 4555
134 Ga0207700_10174571 3300025928 Bacteria 1795
135 Ga0207700_10411878 3300025928 Bacteria 1186
136 Ga0207664_10113397 3300025929 Bacteria 2257
137 Ga0207686_10268950 3300025934 Bacteria 1253
138 Ga0207709_10005673 3300025935 Bacteria 7053
139 Ga0207704_10131039 3300025938 Bacteria 1736
140 Ga0207665_10017755 3300025939 Bacteria 4676
141 Ga0207665_10212465 3300025939 Bacteria 1414
142 Ga0207711_10006925 3300025941 Bacteria 9517
143 Ga0207711_10090091 3300025941 Bacteria 2696
144 Ga0207689_10044767 3300025942 Unclassified 3659
145 Ga0207679_10060451 3300025945 Bacteria 2815
146 Ga0207651_10082460 3300025960 Bacteria 2322
147 Ga0207651_10160684 3300025960 Bacteria 1761
148 Ga0207712_10216295 3300025961 Bacteria 1529
149 Ga0207712_10357615 3300025961 Bacteria 1216
150 Ga0207677_10473326 3300026023 Bacteria 1078
151 Ga0207703_10066641 3300026035 Bacteria 2962
152 Ga0207678_10277882 3300026067 Bacteria 1437
153 Ga0207641_10429944 3300026088 Unclassified 1273
154 Ga0207648_10107196 3300026089 Unclassified 2452
155 Ga0207676_10064861 3300026095 Bacteria 2906
156 Ga0207674_10224728 3300026116 Unclassified 1826
157 Ga0207675_100052852 3300026118 Unclassified 3790
158 Ga0207428_10000348 3300027907 Bacteria 59998
159 Ga0207428_10010704 3300027907 Bacteria 8181
160 Ga0207428_10117170 3300027907 Unclassified 2045
161 Ga0268265_10118559 3300028380 Bacteria 2176
162 Ga0268265_10268231 3300028380 Bacteria 1521
163 Ga0268264_10061298 3300028381 Bacteria 3155
164 Ga0307408_100045678 3300031548 Bacteria 3129
165 Ga0307410_10065503 3300031852 Bacteria 2499
166 Ga0307409_100019480 3300031995 Bacteria 4596
167 Ga0307510_10050090 3300033180 Bacteria 4435
168 Ga0373951_0031130 3300035091 Bacteria 1258
169 Ga0373939_0009032 3300035114 Bacteria 2461
170 Ga0373939_0069277 3300035114 Bacteria 1144
171 Ga0373945_0099988 3300035116 Bacteria 1134
172 Ga0373943_0104506 3300035170 Bacteria 1486
173 Ga0373955_0017685 3300035172 Bacteria 3532
174 Ga0373955_0064616 3300035172 Bacteria 2029
175 Ga0373931_0004230 3300035691 Bacteria 6531
176 Ga0373931_0009625 3300035691 Bacteria 4626
177 Ga0373935_0073789 3300035692 Bacteria 2205
178 Ga0373927_0041199 3300035695 Bacteria 2995
179 Ga0373933_0076091 3300035724 Unclassified 2050
180 Ga0373947_0048578 3300035725 Bacteria 2546
181 Ga0373937_0005863 3300036401 Bacteria 10567
182 Ga0373937_0039125 3300036401 Bacteria 4322
183 Ga0373937_0074463 3300036401 Bacteria 3133
184 Ga0373925_0163012 3300037068 Bacteria 1757
185 Ga0395900_0052914 3300037418 Bacteria 4179
186 Ga0436361_0674108 3300039447 Bacteria 1204
187 Ga0436363_1079649 3300039450 Bacteria 4524
188 Ga0439441_006471 3300042001 Bacteria 1860
189 Ga0439455_0027222 3300042012 Unclassified 1400
190 Ga0451577_0024811 3300042876 Bacteria 5448
191 Ga0453683_0045300 3300044673 Bacteria 2758
192 Ga0453684_0020215 3300044712 Bacteria 10065
193 Ga0495639_0054836 3300046475 Unclassified 1817
194 Ga0495584_0122930 3300046491 Bacteria 1315
195 Ga0495594_0210383 3300046499 Unclassified 1109
196 Ga0495665_0051992 3300046531 Bacteria 2169
197 Ga0495640_0081941 3300046533 Bacteria 2144
198 Ga0495634_0122248 3300046642 Bacteria 1666
199 Ga0495611_0115132 3300046648 Bacteria 1253
200 Ga0495635_0172726 3300046663 Bacteria 1470
201 Ga0495647_0073108 3300046681 Bacteria 1376
202 Ga0495613_0063421 3300046689 Bacteria 2704
203 Ga0495581_0090074 3300047315 Unclassified 1779
204 Ga0495676_0235216 3300047321 Bacteria 1257
205 Ga0496100_0013751 3300048903 Bacteria 4681
206 Ga0496100_0095224 3300048903 Bacteria 2040
207 Ga0496101_0022831 3300048904 Bacteria 4313
208 Ga0496101_0084887 3300048904 Unclassified 2345
209 Ga0496101_0118042 3300048904 Bacteria 2003
210 Ga0496101_0190790 3300048904 Bacteria 1581
211 Ga0496102_0001956 3300048905 Bacteria 17760
212 Ga0496102_0021319 3300048905 Bacteria 5730
213 Ga0496102_0223037 3300048905 Bacteria 1777
214 Ga0496104_0000368 3300048907 Bacteria 39833
215 Ga0496104_0002913 3300048907 Bacteria 14744
216 Ga0496104_0008265 3300048907 Bacteria 9241
217 Ga0496104_0015432 3300048907 Bacteria 6918
218 Ga0496104_0024398 3300048907 Bacteria 5562
219 Ga0496104_0074295 3300048907 Bacteria 3236
220 Ga0496104_0529472 3300048907 Bacteria 1089
221 Ga0496105_0006540 3300048908 Bacteria 8966
222 Ga0496105_0036870 3300048908 Bacteria 4029
223 Ga0496105_0081401 3300048908 Unclassified 2674
224 Ga0496105_0089204 3300048908 Bacteria 2547
225 Ga0496105_0103819 3300048908 Bacteria 2347
226 Ga0496105_0305887 3300048908 Bacteria 1277
227 Ga0496105_0416928 3300048908 Bacteria 1063
228 Ga0496106_0002323 3300048909 Bacteria 14172
229 Ga0496106_0008730 3300048909 Bacteria 7495
230 Ga0496106_0013060 3300048909 Bacteria 6129
231 Ga0496107_0190088 3300048910 Bacteria 1525
232 Ga0496108_0002119 3300048911 Bacteria 15901
233 Ga0496108_0002505 3300048911 Bacteria 14700
234 Ga0496108_0003097 3300048911 Bacteria 13362
235 Ga0496108_0009714 3300048911 Bacteria 7799
236 Ga0496108_0074999 3300048911 Bacteria 2857
237 Ga0496108_0344347 3300048911 Unclassified 1300
238 Ga0496109_0002412 3300048912 Bacteria 15644
239 Ga0496109_0004436 3300048912 Bacteria 11719
240 Ga0496109_0010038 3300048912 Bacteria 8082
241 Ga0496109_0047988 3300048912 Bacteria 3884
242 Ga0496109_0160776 3300048912 Bacteria 2104
243 Ga0496109_0426186 3300048912 Bacteria 1253
244 Ga0496109_0493893 3300048912 Bacteria 1155
245 Ga0496110_0011026 3300048913 Bacteria 7377
246 Ga0496110_0031658 3300048913 Bacteria 4564
247 Ga0496110_0061464 3300048913 Unclassified 3315
248 Ga0496110_0094767 3300048913 Bacteria 2673
249 Ga0496110_0144596 3300048913 Bacteria 2150
250 Ga0496110_0200539 3300048913 Bacteria 1813
251 Ga0496111_0014540 3300048914 Bacteria 5381
252 Ga0496112_0001484 3300048915 Bacteria 18045
253 Ga0496112_0013172 3300048915 Bacteria 7631
254 Ga0496112_0028250 3300048915 Bacteria 5413
255 Ga0496112_0501324 3300048915 Bacteria 1149
256 Ga0496113_0077701 3300048916 Unclassified 2538
257 Ga0496113_0188176 3300048916 Bacteria 1638
258 Ga0496113_0206535 3300048916 Bacteria 1562
259 Ga0496114_0020950 3300048917 Bacteria 5310
260 Ga0496114_0043927 3300048917 Bacteria 3706
261 Ga0496114_0070825 3300048917 Bacteria 2929
262 Ga0496114_0074119 3300048917 Bacteria 2865
263 Ga0496114_0302816 3300048917 Bacteria 1411
264 Ga0496115_0023869 3300048918 Bacteria 4749
265 Ga0496115_0028194 3300048918 Bacteria 4400
266 Ga0496115_0031101 3300048918 Bacteria 4204
267 Ga0496115_0031594 3300048918 Bacteria 4172
268 Ga0496115_0128463 3300048918 Bacteria 2088
269 Ga0496115_0263051 3300048918 Bacteria 1418
270 Ga0501075_0225098 3300049591 Bacteria 1431
271 Ga0501076_0025103 3300049592 Bacteria 4610
272 nmdc:mga0yw44_119388_c1 3300050492 Bacteria 1697
273 nmdc:mga05p37_38120_c1 3300050507 Bacteria 5895
274 nmdc:mga05p37_484443_c1 3300050507 Bacteria 1424
275 nmdc:mga05p37_493901_c1 3300050507 Bacteria 1407
276 nmdc:mga05p37_5712_c1 3300050507 Bacteria 14632
277 nmdc:mga05p37_81912_c1 3300050507 Bacteria 3976
278 nmdc:mga09592_187581_c1 3300050508 Unclassified 1790
279 nmdc:mga09592_2619_c1 3300050508 Bacteria 14569
280 nmdc:mga09592_275429_c1 3300050508 Bacteria 1460
281 nmdc:mga09592_9444_c1 3300050508 Bacteria 7926
282 nmdc:mga0qj67_319_c1 3300050509 Bacteria 33276
283 nmdc:mga0qj67_334261_c1 3300050509 Unclassified 1226
284 nmdc:mga0qj67_7329_c1 3300050509 Bacteria 8156
285 nmdc:mga0qj67_89261_c1 3300050509 Unclassified 2476
286 nmdc:mga06r32_267019_c1 3300050510 Bacteria 1699
287 nmdc:mga08y16_174700_c1 3300050511 Bacteria 2230
288 nmdc:mga08y16_21980_c1 3300050511 Bacteria 6735
289 nmdc:mga08y16_530064_c1 3300050511 Bacteria 1194
290 nmdc:mga08y16_546473_c1 3300050511 Unclassified 1173
291 nmdc:mga0n895_154989_c1 3300050512 Bacteria 2321
292 nmdc:mga0n895_24387_c1 3300050512 Bacteria 5701
293 nmdc:mga0n895_27558_c1 3300050512 Bacteria 5399
294 nmdc:mga0rr50_8637_c1 3300050513 Bacteria 6350
295 nmdc:mga08x19_194915_c1 3300050514 Unclassified 1387
296 nmdc:mga0a205_132239_c1 3300050515 Bacteria 2396
297 nmdc:mga0a205_32068_c1 3300050515 Bacteria 5037
298 nmdc:mga0a205_349511_c1 3300050515 Unclassified 1346
299 nmdc:mga0a205_97869_c1 3300050515 Unclassified 2833
300 Ga0495601_0184636 3300053077 Bacteria 1363
301 Ga0495619_0008058 3300053085 Bacteria 6668
302 Ga0495619_0251460 3300053085 Bacteria 1225
303 Ga0500641_0015486 3300053096 Bacteria 2832
304 Ga0500595_013511 3300053119 Bacteria 3126
305 2874622254 2874620515 Bacteria 8290088
306 2885383218 2885374607 Bacteria 8927485
307 2904667865 2904666416 Bacteria 8226587
308 Ga0075428_100000123
309 Ga0070690_100275546
310 Ga0070680_100052009
311 Ga0070680_100233971
312 Ga0068868_100106438
313 Ga0068868_100129432
314 Ga0070671_100018010
315 Ga0070667_100029579
316 Ga0070703_10041195
317 Ga0070709_10008631
318 Ga0070709_10159981
319 Ga0070714_100054401
320 Ga0070713_100052835
321 Ga0070710_10002405
322 Ga0070711_100006614
323 Ga0070705_100021786
324 Ga0070694_100057721
325 Ga0070708_100171446
326 Ga0070708_100340436
327 Ga0070681_10011530
328 Ga0068867_100201330
329 Ga0070706_100141234
330 Ga0070707_100096311
331 Ga0070707_100369771
332 Ga0070698_100029680
333 Ga0070698_100468179
334 Ga0070699_100017317
335 Ga0070699_100035681
336 Ga0070699_100045971
337 Ga0070699_100132440
338 Ga0070699_100138756
339 Ga0070696_100176922
340 Ga0070704_100032965
341 Ga0068855_100261328
342 Ga0070664_100055102
343 Ga0068857_100197779
344 Ga0068856_100236253
345 Ga0068859_100003068
346 Ga0068861_100109745
347 Ga0068870_10065642
348 Ga0068863_100433974
349 Ga0068858_100010172
350 Ga0068860_100091983
351 Ga0068860_100383749
352 Ga0068862_100026232
353 Ga0068862_100027222
354 Ga0081455_10015421
355 Ga0081455_10046848
356 Ga0081538_10051872
357 Ga0081540_1089093
358 Ga0070717_10084113
359 Ga0070717_10101322
360 Ga0075365_10038527
361 Ga0070715_10036078
362 Ga0070716_100029544
363 Ga0070712_100001285
364 Ga0070712_100197147
365 Ga0075428_100039382
366 Ga0075430_100004820
367 Ga0075430_100010420
368 Ga0075430_100170541
369 Ga0075431_100131741
370 Ga0075431_100261056
371 Ga0075433_10025617
372 Ga0075433_10038602
373 Ga0075433_10139172
374 Ga0075434_100031446
375 Ga0075434_100031981
376 Ga0075434_100124145
377 Ga0075429_100005499
378 Ga0075429_100109423
379 Ga0068865_100156491
380 Ga0075436_100069742
381 Ga0097620_100003068
382 Ga0075435_100021169
383 Ga0075435_100028065
384 Ga0105240_10092084
385 Ga0111539_10023273
386 Ga0111539_10144205
387 Ga0111539_10219118
388 Ga0111539_10372403
389 Ga0111539_10583135
390 Ga0111539_10587894
391 Ga0105245_10003945
392 Ga0105247_10045597
393 Ga0114129_10050753
394 Ga0114129_10361388
395 Ga0114129_10373045
396 Ga0114129_10457452
397 Ga0114129_10687304
398 Ga0105243_10012648
399 Ga0105241_10082794
400 Ga0105242_10083701
401 Ga0105242_10330335
402 Ga0105248_10031764
403 Ga0105248_10064380
404 Ga0105248_10130864
405 Ga0105238_10154032
406 Ga0105238_10288827
407 Ga0105249_10404616
408 Ga0105239_10048988
409 Ga0105239_10169353
410 Ga0105246_10010382
411 Ga0157378_10426329
412 Ga0157378_10481534
413 Ga0157372_10263259
414 Ga0157375_10001986
415 Ga0163163_10018168
416 Ga0163163_10026521
417 Ga0157380_10516714
418 Ga0157377_10051418
419 Ga0157379_10008435
420 Ga0157379_10063638
421 Ga0157379_10289035
422 Ga0157376_10035546
423 Ga0157376_10499814
424 Ga0163161_10311021
425 Ga0213874_10016114
426 Ga0213871_10013001
427 Ga0207697_10050058
428 Ga0207685_10012968
429 Ga0207699_10029484
430 Ga0207684_10121776
431 Ga0207654_10065523
432 Ga0207707_10079852
433 Ga0207695_10108243
434 Ga0207693_10003920
435 Ga0207693_10047953
436 Ga0207663_10000270
437 Ga0207663_10092779
438 Ga0207660_10032273
439 Ga0207694_10180911
440 Ga0207687_10018920
441 Ga0207700_10174571
442 Ga0207700_10411878
443 Ga0207664_10113397
444 Ga0207686_10268950
445 Ga0207709_10005673
446 Ga0207704_10131039
447 Ga0207665_10017755
448 Ga0207665_10212465
449 Ga0207711_10006925
450 Ga0207711_10090091
451 Ga0207689_10044767
452 Ga0207679_10060451
453 Ga0207651_10082460
454 Ga0207651_10160684
455 Ga0207712_10216295
456 Ga0207712_10357615
457 Ga0207677_10473326
458 Ga0207703_10066641
459 Ga0207678_10277882
460 Ga0207641_10429944
461 Ga0207648_10107196
462 Ga0207676_10064861
463 Ga0207674_10224728
464 Ga0207675_100052852
465 Ga0207428_10000348
466 Ga0207428_10010704
467 Ga0207428_10117170
468 Ga0268265_10118559
469 Ga0268265_10268231
470 Ga0268264_10061298
471 Ga0307408_100045678
472 Ga0307410_10065503
473 Ga0307409_100019480
474 Ga0307510_10050090
475 Ga0373951_0031130
476 Ga0373939_0009032
477 Ga0373939_0069277
478 Ga0373945_0099988
479 Ga0373943_0104506
480 Ga0373955_0017685
481 Ga0373955_0064616
482 Ga0373931_0004230
483 Ga0373931_0009625
484 Ga0373935_0073789
485 Ga0373927_0041199
486 Ga0373933_0076091
487 Ga0373947_0048578
488 Ga0373937_0005863
489 Ga0373937_0039125
490 Ga0373937_0074463
491 Ga0373925_0163012
492 Ga0395900_0052914
493 Ga0436361_0674108
494 Ga0436363_1079649
495 Ga0439441_006471
496 Ga0439455_0027222
497 Ga0451577_0024811
498 Ga0453683_0045300
499 Ga0453684_0020215
500 Ga0495639_0054836
501 Ga0495584_0122930
502 Ga0495594_0210383
503 Ga0495665_0051992
504 Ga0495640_0081941
505 Ga0495634_0122248
506 Ga0495611_0115132
507 Ga0495635_0172726
508 Ga0495647_0073108
509 Ga0495613_0063421
510 Ga0495581_0090074
511 Ga0495676_0235216
512 Ga0496100_0013751
513 Ga0496100_0095224
514 Ga0496101_0022831
515 Ga0496101_0084887
516 Ga0496101_0118042
517 Ga0496101_0190790
518 Ga0496102_0001956
519 Ga0496102_0021319
520 Ga0496102_0223037
521 Ga0496104_0000368
522 Ga0496104_0002913
523 Ga0496104_0008265
524 Ga0496104_0015432
525 Ga0496104_0024398
526 Ga0496104_0074295
527 Ga0496104_0529472
528 Ga0496105_0006540
529 Ga0496105_0036870
530 Ga0496105_0081401
531 Ga0496105_0089204
532 Ga0496105_0103819
533 Ga0496105_0305887
534 Ga0496105_0416928
535 Ga0496106_0002323
536 Ga0496106_0008730
537 Ga0496106_0013060
538 Ga0496107_0190088
539 Ga0496108_0002119
540 Ga0496108_0002505
541 Ga0496108_0003097
542 Ga0496108_0009714
543 Ga0496108_0074999
544 Ga0496108_0344347
545 Ga0496109_0002412
546 Ga0496109_0004436
547 Ga0496109_0010038
548 Ga0496109_0047988
549 Ga0496109_0160776
550 Ga0496109_0426186
551 Ga0496109_0493893
552 Ga0496110_0011026
553 Ga0496110_0031658
554 Ga0496110_0061464
555 Ga0496110_0094767
556 Ga0496110_0144596
557 Ga0496110_0200539
558 Ga0496111_0014540
559 Ga0496112_0001484
560 Ga0496112_0013172
561 Ga0496112_0028250
562 Ga0496112_0501324
563 Ga0496113_0077701
564 Ga0496113_0188176
565 Ga0496113_0206535
566 Ga0496114_0020950
567 Ga0496114_0043927
568 Ga0496114_0070825
569 Ga0496114_0074119
570 Ga0496114_0302816
571 Ga0496115_0023869
572 Ga0496115_0028194
573 Ga0496115_0031101
574 Ga0496115_0031594
575 Ga0496115_0128463
576 Ga0496115_0263051
577 Ga0501075_0225098
578 Ga0501076_0025103
579 nmdc:mga0yw44_119388_c1
580 nmdc:mga05p37_38120_c1
581 nmdc:mga05p37_484443_c1
582 nmdc:mga05p37_493901_c1
583 nmdc:mga05p37_5712_c1
584 nmdc:mga05p37_81912_c1
585 nmdc:mga09592_187581_c1
586 nmdc:mga09592_2619_c1
587 nmdc:mga09592_275429_c1
588 nmdc:mga09592_9444_c1
589 nmdc:mga0qj67_319_c1
590 nmdc:mga0qj67_334261_c1
591 nmdc:mga0qj67_7329_c1
592 nmdc:mga0qj67_89261_c1
593 nmdc:mga06r32_267019_c1
594 nmdc:mga08y16_174700_c1
595 nmdc:mga08y16_21980_c1
596 nmdc:mga08y16_530064_c1
597 nmdc:mga08y16_546473_c1
598 nmdc:mga0n895_154989_c1
599 nmdc:mga0n895_24387_c1
600 nmdc:mga0n895_27558_c1
601 nmdc:mga0rr50_8637_c1
602 nmdc:mga08x19_194915_c1
603 nmdc:mga0a205_132239_c1
604 nmdc:mga0a205_32068_c1
605 nmdc:mga0a205_349511_c1
606 nmdc:mga0a205_97869_c1
607 Ga0495601_0184636
608 Ga0495619_0008058
609 Ga0495619_0251460
610 Ga0500641_0015486
611 Ga0500595_013511
612 2874622254
613 2885383218
614 2904667865

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF04392

ABC_sub_bind

ABC transporter substrate binding protein

91

389

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3lft-assembly1.cif.gz_A the crystal structure of the abc domain in complex with l-trp from streptococcus pneumonia to 1.35a 0.8799 29 329
3lkv-assembly1.cif.gz_A-2 crystal structure of conserved domain protein from vibrio cholerae o1 biovar eltor str. n16961 0.8768 29 328
3lft-assembly1.cif.gz_A the crystal structure of the abc domain in complex with l-trp from streptococcus pneumonia to 1.35a 0.8745 29 329
3lkv-assembly1.cif.gz_A-2 crystal structure of conserved domain protein from vibrio cholerae o1 biovar eltor str. n16961 0.8687 29 328
3lft-assembly2.cif.gz_B the crystal structure of the abc domain in complex with l-trp from streptococcus pneumonia to 1.35a 0.8618 32 329
ID Description Score Start End Superfamily
3lftA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8775 151 329 3.40.50.2300
3lftA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8608 151 329 3.40.50.2300
3lkvA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8539 151 328 3.40.50.2300
3lkvA02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.8325 151 328 3.40.50.2300
af_Q54VK0_115_197_3.40.50.10860 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Leucine Dehydrogenase, chain A, domain 1 0.7841 165 226 3.40.50.10860
ID Description Score Start End GO Terms
AF-A0A537QMJ9-F1-model_v4 ABC transporter substrate-binding protein 0.9656 42 330
AF-A0A7Y0XAS6-F1-model_v4 ABC transporter substrate-binding protein 0.9653 68 144
AF-A0A7S7TSY9-F1-model_v4 ABC transporter substrate-binding protein 0.9634 30 330
AF-A0A1C3W1M1-F1-model_v4 Putative ABC transport system substrate-binding protein 0.9612 30 330
AF-A0A7S7TSY9-F1-model_v4 ABC transporter substrate-binding protein 0.9572 30 330

Map