F398286

General Info

Members Datasets Scaffolds Average Seq Length
305 208 610 242

Family's Representative Sequence

Representative Sequence 3300046529|Ga0495652_0108516|Ga0495652_0108516_1279_2103
Length 274
Sequence MTPYARRGVHGQTVETLARRVLSGEIPEGATLDLVALQSELDVSLTALRESLKVLAAKGMVDARQKRGTFVRARADWNLLDADVLRWQFAEGSAAGADLSLLRNLGEVRGIVEPAAVRLAAARRTAGDLAALDEALAAMDSGSGDAAHAVEADLAFHRALLAATHNELLERMEMVIESGLAHRDEIVHSSPHGEDPVPSHRAVLDAVRAQDADAAEAAMRALLEQAVRDLDLVHGGRPDDGGGTTRPRSDGNPSGTAPGTGSDDHGATRREDTL

Samples

Sample ID Description Type Environment
1 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
6 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
7 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
8 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
9 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
10 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
11 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
12 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
13 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
16 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
17 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
18 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
19 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
20 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
21 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
22 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
23 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
24 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
25 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
26 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
27 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
28 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
37 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
38 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
40 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
42 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
43 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
44 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
45 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
46 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
47 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
48 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
49 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
50 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
51 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
52 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
53 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
54 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
55 3300033545 Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4 Metagenome Unclassified
56 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
57 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
58 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
59 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
60 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
61 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
62 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
63 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
64 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
65 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
66 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
67 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
68 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
69 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
70 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
71 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
72 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
73 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
74 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
75 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
76 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
77 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
78 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
79 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
80 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
81 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
82 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
83 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
84 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
85 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
86 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
87 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
88 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
89 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
90 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
91 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
92 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
93 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
94 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
95 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
96 3300046542 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 rhizosphere Metagenome Rhizosphere
97 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
98 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
99 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
100 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
101 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
102 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
103 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
104 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
105 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
106 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
107 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
108 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
109 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
110 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
111 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
112 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
113 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
114 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
115 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
116 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
117 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
118 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
119 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
120 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
121 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
122 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
123 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
124 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
125 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
126 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
127 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
128 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
129 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
133 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
140 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
141 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
142 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
143 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
144 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
145 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
146 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
147 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
149 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
150 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
151 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
152 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
153 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
154 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
155 3300053099 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 endosphere Metagenome Endosphere
156 3300053100 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 endosphere Metagenome Endosphere
157 3300053101 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 endosphere Metagenome Endosphere
158 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
159 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
160 3300053129 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 endosphere Metagenome Endosphere
161 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
162 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
163 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
164 3300053143 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 endosphere Metagenome Endosphere
165 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
166 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
167 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
168 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
169 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
170 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
171 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
172 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
173 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
174 2616644814 Streptomyces mirabilis OK461 Isolate Rhizosphere
175 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
176 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
177 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
178 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
179 2862705112 Streptomyces triticirhizae NEAU-YY642 Isolate Rhizosphere
180 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
181 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
182 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
183 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
184 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
185 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
186 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
187 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
188 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
189 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
190 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
191 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
192 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
193 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
194 2990044586 Streptomyces sedi JCM 16909 Isolate Unclassified
195 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
196 3006393351 Streptomyces sp. SID4985 Isolate Unclassified
197 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
198 8003314358 Amycolatopsis sp. MtRt-6 Isolate Unclassified
199 8008485437 Streptomyces mimosae 3MP-10 Isolate Unclassified
200 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
201 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
202 8025524527 Streptomyces sp. 3MP-14 Isolate Unclassified
203 8025530807 Streptomyces sp. 4R-3d Isolate Unclassified
204 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
205 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
206 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
207 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
208 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 87.54
Metatranscriptomes 0
Isolates 12.46

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.56
Nodule 0
Rhizoplane 0.33
Rhizosphere 80
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495652_0108516 3300046529 Bacteria 2237
2 JGI24739J22299_10019249 3300001989 Bacteria 2446
3 JGI24737J22298_10003224 3300001990 Bacteria 5791
4 JGI25406J46586_10000217 3300003203 Bacteria 25384
5 rootH2_10015519 3300003320 Bacteria 14420
6 Ga0070660_100329457 3300005339 Bacteria 1255
7 Ga0070692_10189650 3300005345 Bacteria 1197
8 Ga0070668_100006136 3300005347 Bacteria 8911
9 Ga0070668_100058083 3300005347 Bacteria 2992
10 Ga0070663_100000373 3300005455 Bacteria 23523
11 Ga0070678_100868143 3300005456 Bacteria 823
12 Ga0068853_100055528 3300005539 Bacteria 3414
13 Ga0070665_100024610 3300005548 Bacteria 6067
14 Ga0068855_100015466 3300005563 Bacteria 9187
15 Ga0068857_100029894 3300005577 Bacteria 4808
16 Ga0068854_100002779 3300005578 Bacteria 10868
17 Ga0068856_100096009 3300005614 Bacteria 2953
18 Ga0068852_100039345 3300005616 Bacteria 3981
19 Ga0081455_10000198 3300005937 Bacteria 76277
20 Ga0081455_10033728 3300005937 Bacteria 4596
21 Ga0081539_10000692 3300005985 Bacteria 67584
22 Ga0105238_10469578 3300009551 Bacteria 1257
23 Ga0105239_10123860 3300010375 Bacteria 2872
24 Ga0209758_1028338 3300025297 Bacteria 2372
25 Ga0207426_1009457 3300025302 Bacteria 3855
26 Ga0207426_1039317 3300025302 Bacteria 1482
27 Ga0207688_10496550 3300025901 Bacteria 764
28 Ga0207647_10005481 3300025904 Bacteria 9289
29 Ga0207647_10009404 3300025904 Bacteria 6945
30 Ga0207654_10005285 3300025911 Bacteria 6519
31 Ga0207695_10023783 3300025913 Bacteria 6915
32 Ga0207671_10000557 3300025914 Bacteria 50180
33 Ga0207694_10011483 3300025924 Bacteria 6685
34 Ga0207690_10435271 3300025932 Bacteria 1052
35 Ga0207669_10517265 3300025937 Bacteria 958
36 Ga0207667_10088535 3300025949 Bacteria 3201
37 Ga0207668_10005583 3300025972 Bacteria 7415
38 Ga0207668_10261114 3300025972 Bacteria 1411
39 Ga0207640_10022455 3300025981 Bacteria 3777
40 Ga0207678_10000146 3300026067 Bacteria 58091
41 Ga0207702_10170426 3300026078 Bacteria 1996
42 Ga0207702_10222065 3300026078 Bacteria 1761
43 Ga0207674_10072788 3300026116 Bacteria 3451
44 Ga0207674_10308056 3300026116 Bacteria 1533
45 Ga0207683_10110002 3300026121 Bacteria 2467
46 Ga0207683_10265438 3300026121 Bacteria 1568
47 Ga0207698_10107917 3300026142 Bacteria 2325
48 Ga0268266_10013973 3300028379 Bacteria 6913
49 Ga0268266_10051427 3300028379 Bacteria 3537
50 Ga0307517_10046412 3300028786 Bacteria 4533
51 Ga0307517_10088694 3300028786 Bacteria 2554
52 Ga0307515_10109136 3300028794 Bacteria 3253
53 Ga0307515_10151086 3300028794 Bacteria 2427
54 Ga0307511_10082573 3300030521 Bacteria 2246
55 Ga0307511_10118741 3300030521 Bacteria 1646
56 Ga0307512_10005295 3300030522 Bacteria 13533
57 Ga0307512_10020541 3300030522 Bacteria 5972
58 Ga0316176_1179621 3300030732 Bacteria 2875
59 Ga0314311_1193819 3300030733 Bacteria 4423
60 Ga0316180_1005070 3300030736 Bacteria 1316
61 Ga0307513_10238969 3300031456 Bacteria 1623
62 Ga0307509_10008616 3300031507 Bacteria 12949
63 Ga0307509_10012771 3300031507 Bacteria 10003
64 Ga0307509_10046384 3300031507 Bacteria 4679
65 Ga0307509_10225517 3300031507 Bacteria 1682
66 Ga0307509_10280157 3300031507 Bacteria 1429
67 Ga0307508_10024244 3300031616 Bacteria 5505
68 Ga0307508_10032291 3300031616 Bacteria 4729
69 Ga0307508_10059955 3300031616 Bacteria 3365
70 Ga0307508_10166738 3300031616 Bacteria 1806
71 Ga0307508_10329210 3300031616 Bacteria 1119
72 Ga0326468_10009074 3300031889 Bacteria 978
73 Ga0307406_10118353 3300031901 Bacteria 1837
74 Ga0307507_10006013 3300033179 Bacteria 19138
75 Ga0307507_10181250 3300033179 Bacteria 1505
76 Ga0307510_10182702 3300033180 Bacteria 1657
77 Ga0307510_10191031 3300033180 Bacteria 1596
78 Ga0316214_1017597 3300033545 Bacteria 991
79 Ga0395900_0136084 3300037418 Bacteria 2517
80 Ga0395898_0002401 3300037466 Bacteria 22243
81 Ga0395901_0055245 3300038443 Bacteria 4129
82 Ga0395901_0282411 3300038443 Bacteria 1725
83 Ga0439448_0030006 3300042005 Bacteria 1723
84 Ga0450903_000740 3300042138 Bacteria 6452
85 Ga0466972_0001926 3300044658 Bacteria 10182
86 Ga0466972_0076125 3300044658 Bacteria 1598
87 Ga0466965_0004510 3300044683 Bacteria 6200
88 Ga0466965_0230418 3300044683 Bacteria 989
89 Ga0466971_0011239 3300044719 Bacteria 3922
90 Ga0466968_0120046 3300044735 Bacteria 1189
91 Ga0466970_0005852 3300044765 Bacteria 6122
92 Ga0466960_0001910 3300044901 Bacteria 7680
93 Ga0466958_0072523 3300045836 Bacteria 2109
94 Ga0466967_0004326 3300045976 Bacteria 9551
95 Ga0466967_0404081 3300045976 Bacteria 1329
96 Ga0495627_069102 3300046453 Bacteria 1034
97 Ga0495592_0017895 3300046454 Bacteria 5386
98 Ga0495592_0042597 3300046454 Bacteria 3399
99 Ga0495603_0014562 3300046455 Bacteria 4757
100 Ga0495603_0176109 3300046455 Bacteria 1238
101 Ga0495629_0000405 3300046459 Bacteria 36057
102 Ga0495629_0032227 3300046459 Bacteria 3711
103 Ga0495629_0062444 3300046459 Bacteria 2602
104 Ga0495629_0084634 3300046459 Bacteria 2213
105 Ga0495629_0143909 3300046459 Bacteria 1658
106 Ga0495638_0028899 3300046460 Bacteria 3577
107 Ga0495651_0000294 3300046462 Bacteria 38829
108 Ga0495580_0068843 3300046472 Bacteria 2474
109 Ga0495605_0003325 3300046474 Bacteria 9621
110 Ga0495605_0159916 3300046474 Bacteria 1000
111 Ga0495664_0054873 3300046477 Bacteria 2370
112 Ga0495585_0026975 3300046492 Bacteria 3279
113 Ga0495585_0059897 3300046492 Bacteria 2097
114 Ga0495594_0041832 3300046499 Bacteria 2508
115 Ga0495594_0091231 3300046499 Bacteria 1707
116 Ga0495607_0041925 3300046501 Bacteria 2716
117 Ga0495607_0059052 3300046501 Bacteria 2189
118 Ga0495583_0005720 3300046506 Bacteria 8345
119 Ga0495583_0023834 3300046506 Bacteria 3087
120 Ga0495608_0188934 3300046511 Bacteria 1301
121 Ga0495610_0040177 3300046512 Bacteria 2360
122 Ga0495616_0004972 3300046513 Bacteria 8297
123 Ga0495618_0055805 3300046514 Bacteria 2501
124 Ga0495618_0195055 3300046514 Bacteria 1283
125 Ga0495620_0002694 3300046515 Bacteria 10251
126 Ga0495628_0004514 3300046516 Bacteria 12333
127 Ga0495628_0037183 3300046516 Bacteria 3904
128 Ga0495631_0010577 3300046518 Bacteria 4562
129 Ga0495632_0048303 3300046519 Bacteria 2108
130 Ga0495643_0028792 3300046522 Bacteria 3111
131 Ga0495666_0052330 3300046526 Bacteria 1960
132 Ga0495652_0001934 3300046529 Bacteria 22030
133 Ga0495654_0103297 3300046530 Bacteria 1309
134 Ga0495640_0002386 3300046533 Bacteria 15082
135 Ga0495586_0028633 3300046535 Bacteria 2981
136 Ga0495609_0098628 3300046538 Bacteria 1266
137 Ga0495597_0020665 3300046542 Bacteria 3064
138 Ga0495645_0034927 3300046543 Bacteria 3665
139 Ga0495622_0018645 3300046557 Bacteria 3232
140 Ga0495633_0051197 3300046558 Bacteria 1946
141 Ga0495667_0025284 3300046559 Bacteria 4002
142 Ga0495668_0038540 3300046616 Bacteria 2669
143 Ga0495634_0020616 3300046642 Bacteria 4672
144 Ga0495634_0047032 3300046642 Bacteria 2909
145 Ga0495634_0301569 3300046642 Bacteria 968
146 Ga0495611_0047534 3300046648 Bacteria 1926
147 Ga0495635_0000865 3300046663 Bacteria 19865
148 Ga0495588_0076227 3300046674 Bacteria 1748
149 Ga0495588_0111692 3300046674 Bacteria 1440
150 Ga0495657_0002910 3300046675 Bacteria 14209
151 Ga0495657_0017111 3300046675 Bacteria 5269
152 Ga0495623_0031389 3300046679 Bacteria 3416
153 Ga0495623_0300651 3300046679 Bacteria 887
154 Ga0495646_0048622 3300046680 Bacteria 2575
155 Ga0495658_0037781 3300046683 Bacteria 2671
156 Ga0495613_0006869 3300046689 Bacteria 8497
157 Ga0495613_0013996 3300046689 Bacteria 5954
158 Ga0495613_0172139 3300046689 Bacteria 1536
159 Ga0495624_0076093 3300046690 Bacteria 2083
160 Ga0495624_0126751 3300046690 Bacteria 1566
161 Ga0495670_0067174 3300046691 Bacteria 1810
162 Ga0495649_0095485 3300046694 Bacteria 1582
163 Ga0495589_0002712 3300046794 Bacteria 9791
164 Ga0495589_0008913 3300046794 Bacteria 5220
165 Ga0495589_0013840 3300046794 Bacteria 4160
166 Ga0495600_0030796 3300046809 Bacteria 3475
167 Ga0495660_0098646 3300046810 Bacteria 1507
168 Ga0495604_0004837 3300047317 Bacteria 10673
169 Ga0495604_0010214 3300047317 Bacteria 7436
170 Ga0495604_0036939 3300047317 Bacteria 3849
171 Ga0495604_0125344 3300047317 Bacteria 1853
172 Ga0495636_0014068 3300047318 Bacteria 3180
173 Ga0495672_0065560 3300047320 Bacteria 2076
174 Ga0495676_0004497 3300047321 Bacteria 12744
175 Ga0495676_0020472 3300047321 Bacteria 5802
176 Ga0495676_0039420 3300047321 Bacteria 3912
177 Ga0495683_0058985 3300047323 Bacteria 1904
178 Ga0495687_002104 3300047443 Bacteria 16693
179 Ga0495687_014281 3300047443 Bacteria 4094
180 Ga0495687_030454 3300047443 Bacteria 2484
181 Ga0495685_000432 3300047447 Bacteria 13147
182 Ga0495685_002166 3300047447 Bacteria 6100
183 Ga0495685_013067 3300047447 Bacteria 2816
184 Ga0495685_019338 3300047447 Bacteria 2340
185 Ga0495685_042843 3300047447 Bacteria 1544
186 Ga0495681_0014408 3300047470 Bacteria 4533
187 Ga0495681_0032768 3300047470 Bacteria 2612
188 Ga0495686_0164846 3300047472 Bacteria 1292
189 Ga0495678_054469 3300049459 Bacteria 1531
190 Ga0501031_0014357 3300049568 Bacteria 5149
191 Ga0501031_0041873 3300049568 Bacteria 2990
192 Ga0501032_0023687 3300049569 Bacteria 4239
193 Ga0501032_0200018 3300049569 Bacteria 1304
194 Ga0501033_0027517 3300049570 Bacteria 4274
195 Ga0501033_0043983 3300049570 Bacteria 3324
196 Ga0501034_0007992 3300049571 Bacteria 11228
197 Ga0501034_0114717 3300049571 Bacteria 2682
198 Ga0501034_0194315 3300049571 Bacteria 1990
199 Ga0501036_0022671 3300049572 Bacteria 5284
200 Ga0501036_0096391 3300049572 Bacteria 2501
201 Ga0501037_0003898 3300049573 Bacteria 10826
202 Ga0501037_0346220 3300049573 Bacteria 1026
203 Ga0501038_0005228 3300049574 Bacteria 12072
204 Ga0501038_0020551 3300049574 Bacteria 5933
205 Ga0501038_0034495 3300049574 Bacteria 4448
206 Ga0501038_0069044 3300049574 Bacteria 3003
207 Ga0501039_0004422 3300049575 Bacteria 10609
208 Ga0501039_0078228 3300049575 Bacteria 2572
209 Ga0501043_0013274 3300049579 Bacteria 6440
210 Ga0501043_0022607 3300049579 Bacteria 4929
211 Ga0501043_0040192 3300049579 Bacteria 3676
212 Ga0501043_0100720 3300049579 Bacteria 2271
213 Ga0501046_0057649 3300049580 Bacteria 3046
214 Ga0501046_0245610 3300049580 Bacteria 1319
215 Ga0501046_0281134 3300049580 Bacteria 1219
216 Ga0501047_0005724 3300049581 Bacteria 11696
217 Ga0501047_0034457 3300049581 Bacteria 4889
218 Ga0501047_0054422 3300049581 Bacteria 3870
219 Ga0501047_0406874 3300049581 Bacteria 1193
220 Ga0501048_0387936 3300049582 Bacteria 998
221 Ga0501067_0010247 3300049583 Bacteria 5185
222 Ga0501068_0026377 3300049584 Bacteria 3422
223 Ga0501069_0002534 3300049585 Bacteria 9329
224 Ga0501070_0024287 3300049586 Bacteria 5083
225 Ga0501070_0066363 3300049586 Bacteria 2988
226 Ga0501070_0521488 3300049586 Bacteria 953
227 Ga0501072_0008035 3300049588 Bacteria 8009
228 Ga0501073_0067711 3300049589 Bacteria 2489
229 Ga0501080_0041737 3300049742 Bacteria 4273
230 Ga0501083_0041135 3300049744 Bacteria 3135
231 Ga0501035_0006021 3300049822 Bacteria 11418
232 Ga0501035_0009333 3300049822 Bacteria 9118
233 Ga0501035_0010142 3300049822 Bacteria 8742
234 Ga0501044_0002140 3300049823 Bacteria 22629
235 Ga0501044_0002152 3300049823 Bacteria 22602
236 Ga0501044_0067265 3300049823 Bacteria 3651
237 Ga0501044_0072186 3300049823 Bacteria 3510
238 Ga0501044_0094782 3300049823 Bacteria 3008
239 Ga0501044_0163818 3300049823 Bacteria 2198
240 Ga0501044_0391029 3300049823 Bacteria 1304
241 Ga0501044_0780252 3300049823 Bacteria 836
242 Ga0495601_0001936 3300053077 Bacteria 11584
243 Ga0495601_0059536 3300053077 Bacteria 2422
244 Ga0495601_0187183 3300053077 Bacteria 1353
245 Ga0495612_0004987 3300053078 Bacteria 5495
246 Ga0495655_0004264 3300053083 Bacteria 2433
247 Ga0500578_0051837 3300053086 Bacteria 2628
248 Ga0500644_0006751 3300053088 Bacteria 2957
249 Ga0500566_0021630 3300053094 Bacteria 3780
250 Ga0500654_106891 3300053099 Bacteria 1165
251 Ga0500660_065801 3300053100 Bacteria 1723
252 Ga0500553_041996 3300053101 Bacteria 2237
253 Ga0500569_023196 3300053109 Bacteria 1664
254 Ga0500614_048781 3300053123 Bacteria 1104
255 Ga0500628_041542 3300053129 Bacteria 1052
256 Ga0500658_0080454 3300053134 Bacteria 1392
257 Ga0500561_0002595 3300053137 Bacteria 3062
258 Ga0500577_0133116 3300053142 Bacteria 1043
259 Ga0500579_113701 3300053143 Bacteria 1349
260 Ga0500600_0026148 3300053149 Bacteria 3468
261 Ga0500600_0067262 3300053149 Bacteria 1976
262 Ga0500616_0038447 3300053153 Bacteria 2584
263 Ga0500634_0081341 3300053161 Bacteria 1668
264 Ga0501084_0420642 3300054114 Bacteria 1129
265 Ga0501082_0085316 3300060353 Bacteria 2723
266 Ga0466962_0178463 3300061719 Bacteria 1035
267 Ga0530510_0030488 3300061734 Bacteria 3874
268 2515853268 2515154155 Bacteria 7985436
269 2547405852 2547132111 Bacteria 8013147
270 2616698546 2616644814 Bacteria 11555299
271 2786673743 2786546132 Bacteria 10419719
272 2808915900 2808606375 Bacteria 9466072
273 2816426902 2816332119 Bacteria 8120218
274 2819699163 2818991463 Bacteria 7948711
275 2862709325 2862705112 Bacteria 6563286
276 2867302548 2867302475 Bacteria 7087181
277 2867314549 2867312974 Bacteria 7058875
278 2867323375 2867319477 Bacteria 7069771
279 2867350695 2867346516 Bacteria 7608576
280 2868090149 2868088558 Bacteria 7609351
281 2870724253 2870721527 Bacteria 9689237
282 2954682516 2954682443 Bacteria 9862841
283 2954719613 2954711539 Bacteria 10867210
284 2954729648 2954721474 Bacteria 10456478
285 2954732160 2954731030 Bacteria 10243860
286 2954748552 2954740390 Bacteria 10229294
287 2954751101 2954749733 Bacteria 10366972
288 2954767679 2954759201 Bacteria 9358192
289 2966604752 2966598605 Bacteria 7676064
290 2990047664 2990044586 Bacteria 6603797
291 2997603909 2997600082 Bacteria 9896405
292 3006394672 3006393351 Bacteria 6615579
293 3006499948 3006493962 Bacteria 8825450
294 8003315037 8003314358 Bacteria 10575343
295 8003322153 8003314358 Bacteria 10575343
296 8008487652 8008485437 Bacteria 7198341
297 8008575246 8008574985 Bacteria 7815457
298 8025415255 8025413630 Bacteria 7014048
299 8025526829 8025524527 Bacteria 7197316
300 8025533346 8025530807 Bacteria 8495698
301 8047895578 8047893842 Bacteria 11723082
302 8048133671 8048127548 Bacteria 11053136
303 8048363377 8048356638 Bacteria 11044339
304 8048372601 8048369669 Bacteria 11666822
305 8048381535 8048379754 Bacteria 11877923
306 Ga0495652_0108516
307 JGI24739J22299_10019249
308 JGI24737J22298_10003224
309 JGI25406J46586_10000217
310 rootH2_10015519
311 Ga0070660_100329457
312 Ga0070692_10189650
313 Ga0070668_100006136
314 Ga0070668_100058083
315 Ga0070663_100000373
316 Ga0070678_100868143
317 Ga0068853_100055528
318 Ga0070665_100024610
319 Ga0068855_100015466
320 Ga0068857_100029894
321 Ga0068854_100002779
322 Ga0068856_100096009
323 Ga0068852_100039345
324 Ga0081455_10000198
325 Ga0081455_10033728
326 Ga0081539_10000692
327 Ga0105238_10469578
328 Ga0105239_10123860
329 Ga0209758_1028338
330 Ga0207426_1009457
331 Ga0207426_1039317
332 Ga0207688_10496550
333 Ga0207647_10005481
334 Ga0207647_10009404
335 Ga0207654_10005285
336 Ga0207695_10023783
337 Ga0207671_10000557
338 Ga0207694_10011483
339 Ga0207690_10435271
340 Ga0207669_10517265
341 Ga0207667_10088535
342 Ga0207668_10005583
343 Ga0207668_10261114
344 Ga0207640_10022455
345 Ga0207678_10000146
346 Ga0207702_10170426
347 Ga0207702_10222065
348 Ga0207674_10072788
349 Ga0207674_10308056
350 Ga0207683_10110002
351 Ga0207683_10265438
352 Ga0207698_10107917
353 Ga0268266_10013973
354 Ga0268266_10051427
355 Ga0307517_10046412
356 Ga0307517_10088694
357 Ga0307515_10109136
358 Ga0307515_10151086
359 Ga0307511_10082573
360 Ga0307511_10118741
361 Ga0307512_10005295
362 Ga0307512_10020541
363 Ga0316176_1179621
364 Ga0314311_1193819
365 Ga0316180_1005070
366 Ga0307513_10238969
367 Ga0307509_10008616
368 Ga0307509_10012771
369 Ga0307509_10046384
370 Ga0307509_10225517
371 Ga0307509_10280157
372 Ga0307508_10024244
373 Ga0307508_10032291
374 Ga0307508_10059955
375 Ga0307508_10166738
376 Ga0307508_10329210
377 Ga0326468_10009074
378 Ga0307406_10118353
379 Ga0307507_10006013
380 Ga0307507_10181250
381 Ga0307510_10182702
382 Ga0307510_10191031
383 Ga0316214_1017597
384 Ga0395900_0136084
385 Ga0395898_0002401
386 Ga0395901_0055245
387 Ga0395901_0282411
388 Ga0439448_0030006
389 Ga0450903_000740
390 Ga0466972_0001926
391 Ga0466972_0076125
392 Ga0466965_0004510
393 Ga0466965_0230418
394 Ga0466971_0011239
395 Ga0466968_0120046
396 Ga0466970_0005852
397 Ga0466960_0001910
398 Ga0466958_0072523
399 Ga0466967_0004326
400 Ga0466967_0404081
401 Ga0495627_069102
402 Ga0495592_0017895
403 Ga0495592_0042597
404 Ga0495603_0014562
405 Ga0495603_0176109
406 Ga0495629_0000405
407 Ga0495629_0032227
408 Ga0495629_0062444
409 Ga0495629_0084634
410 Ga0495629_0143909
411 Ga0495638_0028899
412 Ga0495651_0000294
413 Ga0495580_0068843
414 Ga0495605_0003325
415 Ga0495605_0159916
416 Ga0495664_0054873
417 Ga0495585_0026975
418 Ga0495585_0059897
419 Ga0495594_0041832
420 Ga0495594_0091231
421 Ga0495607_0041925
422 Ga0495607_0059052
423 Ga0495583_0005720
424 Ga0495583_0023834
425 Ga0495608_0188934
426 Ga0495610_0040177
427 Ga0495616_0004972
428 Ga0495618_0055805
429 Ga0495618_0195055
430 Ga0495620_0002694
431 Ga0495628_0004514
432 Ga0495628_0037183
433 Ga0495631_0010577
434 Ga0495632_0048303
435 Ga0495643_0028792
436 Ga0495666_0052330
437 Ga0495652_0001934
438 Ga0495654_0103297
439 Ga0495640_0002386
440 Ga0495586_0028633
441 Ga0495609_0098628
442 Ga0495597_0020665
443 Ga0495645_0034927
444 Ga0495622_0018645
445 Ga0495633_0051197
446 Ga0495667_0025284
447 Ga0495668_0038540
448 Ga0495634_0020616
449 Ga0495634_0047032
450 Ga0495634_0301569
451 Ga0495611_0047534
452 Ga0495635_0000865
453 Ga0495588_0076227
454 Ga0495588_0111692
455 Ga0495657_0002910
456 Ga0495657_0017111
457 Ga0495623_0031389
458 Ga0495623_0300651
459 Ga0495646_0048622
460 Ga0495658_0037781
461 Ga0495613_0006869
462 Ga0495613_0013996
463 Ga0495613_0172139
464 Ga0495624_0076093
465 Ga0495624_0126751
466 Ga0495670_0067174
467 Ga0495649_0095485
468 Ga0495589_0002712
469 Ga0495589_0008913
470 Ga0495589_0013840
471 Ga0495600_0030796
472 Ga0495660_0098646
473 Ga0495604_0004837
474 Ga0495604_0010214
475 Ga0495604_0036939
476 Ga0495604_0125344
477 Ga0495636_0014068
478 Ga0495672_0065560
479 Ga0495676_0004497
480 Ga0495676_0020472
481 Ga0495676_0039420
482 Ga0495683_0058985
483 Ga0495687_002104
484 Ga0495687_014281
485 Ga0495687_030454
486 Ga0495685_000432
487 Ga0495685_002166
488 Ga0495685_013067
489 Ga0495685_019338
490 Ga0495685_042843
491 Ga0495681_0014408
492 Ga0495681_0032768
493 Ga0495686_0164846
494 Ga0495678_054469
495 Ga0501031_0014357
496 Ga0501031_0041873
497 Ga0501032_0023687
498 Ga0501032_0200018
499 Ga0501033_0027517
500 Ga0501033_0043983
501 Ga0501034_0007992
502 Ga0501034_0114717
503 Ga0501034_0194315
504 Ga0501036_0022671
505 Ga0501036_0096391
506 Ga0501037_0003898
507 Ga0501037_0346220
508 Ga0501038_0005228
509 Ga0501038_0020551
510 Ga0501038_0034495
511 Ga0501038_0069044
512 Ga0501039_0004422
513 Ga0501039_0078228
514 Ga0501043_0013274
515 Ga0501043_0022607
516 Ga0501043_0040192
517 Ga0501043_0100720
518 Ga0501046_0057649
519 Ga0501046_0245610
520 Ga0501046_0281134
521 Ga0501047_0005724
522 Ga0501047_0034457
523 Ga0501047_0054422
524 Ga0501047_0406874
525 Ga0501048_0387936
526 Ga0501067_0010247
527 Ga0501068_0026377
528 Ga0501069_0002534
529 Ga0501070_0024287
530 Ga0501070_0066363
531 Ga0501070_0521488
532 Ga0501072_0008035
533 Ga0501073_0067711
534 Ga0501080_0041737
535 Ga0501083_0041135
536 Ga0501035_0006021
537 Ga0501035_0009333
538 Ga0501035_0010142
539 Ga0501044_0002140
540 Ga0501044_0002152
541 Ga0501044_0067265
542 Ga0501044_0072186
543 Ga0501044_0094782
544 Ga0501044_0163818
545 Ga0501044_0391029
546 Ga0501044_0780252
547 Ga0495601_0001936
548 Ga0495601_0059536
549 Ga0495601_0187183
550 Ga0495612_0004987
551 Ga0495655_0004264
552 Ga0500578_0051837
553 Ga0500644_0006751
554 Ga0500566_0021630
555 Ga0500654_106891
556 Ga0500660_065801
557 Ga0500553_041996
558 Ga0500569_023196
559 Ga0500614_048781
560 Ga0500628_041542
561 Ga0500658_0080454
562 Ga0500561_0002595
563 Ga0500577_0133116
564 Ga0500579_113701
565 Ga0500600_0026148
566 Ga0500600_0067262
567 Ga0500616_0038447
568 Ga0500634_0081341
569 Ga0501084_0420642
570 Ga0501082_0085316
571 Ga0466962_0178463
572 Ga0530510_0030488
573 2515853268
574 2547405852
575 2616698546
576 2786673743
577 2808915900
578 2816426902
579 2819699163
580 2862709325
581 2867302548
582 2867314549
583 2867323375
584 2867350695
585 2868090149
586 2870724253
587 2954682516
588 2954719613
589 2954729648
590 2954732160
591 2954748552
592 2954751101
593 2954767679
594 2966604752
595 2990047664
596 2997603909
597 3006394672
598 3006499948
599 8003315037
600 8003322153
601 8008487652
602 8008575246
603 8025415255
604 8025526829
605 8025533346
606 8047895578
607 8048133671
608 8048363377
609 8048372601
610 8048381535

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00392

GntR

Bacterial regulatory proteins, gntR family

10

71

0.97

PF07729

FCD

FCD domain

104

225

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3edp-assembly1.cif.gz_A the crystal structure of the protein lin2111 (functionally unknown) from listeria innocua clip11262 0.9023 23 90
4h0e-assembly1.cif.gz_A crystal structure of mutant orr3 in complex with ntd of arar 0.8945 26 87
3eet-assembly1.cif.gz_A-2 crystal structure of putative gntr-family transcriptional regulator 0.8907 23 90
2wv0-assembly6.cif.gz_J-3 crystal structure of the gntr-hutc family member yvoa from bacillus subtilis 0.8761 16 89
6sbs-assembly1.cif.gz_A ytra from sulfolobus acidocaldarius, a gntr-family transcription factor 0.8689 14 90
ID Description Score Start End Superfamily
2hs5A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9643 26 89 1.10.10.10
af_P31475_2_79_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9605 26 89 1.10.10.10
af_P31460_2_70_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9549 23 89 1.10.10.10
af_Q79G00_16_82_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9525 26 87 1.10.10.10
af_P9WMG7_15_85_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9411 26 89 1.10.10.10
ID Description Score Start End GO Terms
AF-W1YH37-F1-model_v4 GntR family transcriptional regulator 0.9518 25 106 GO:0003677
GO:0003700
AF-A0A561B7C2-F1-model_v4 DNA-binding FadR family transcriptional regulator 0.9498 15 226 GO:0003677
GO:0003700
AF-A0A6G2V3F3-F1-model_v4 GntR family transcriptional regulator 0.943 23 103 GO:0003677
GO:0003700
AF-A0A4R0JKR2-F1-model_v4 FadR family transcriptional regulator 0.9418 33 222 GO:0003677
GO:0003700
AF-A0A1H6DAR5-F1-model_v4 DNA-binding transcriptional regulator, FadR family 0.9155 17 223 GO:0003677
GO:0003700

Map