F397922

General Info

Members Datasets Scaffolds Average Seq Length
305 200 610 293

Family's Representative Sequence

Representative Sequence 3300005327|Ga0070658_10198084|Ga0070658_101980842
Length 317
Sequence LARTRFLKDTGLTVRMTTVMFALGALFVGLVVALMYAVPSQFAWVVAVIGLAVAWGQWYFSDRVAMRGMRAHEVTPEEDPELHGMVDRLCALADMPKPRVAVAATDMPNAFATGRSPDRSVVCVTTGIRTMLTPEELEAVLAHELSHVAHRDVLVMTIASSAGIIAGFLLRSWRFGALMRRGKGGGLFAVVGVVAISLVVYAISFLLLRLLSRYRELCADRSGAYLTQKPGALASALQKISGGIVATPQRDLRASQPMNAFFIAPAITSRTLQALSSTHPTLEQRLDQLARIATELGRPFDGGPATGSPGEPTALGH

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300002070 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4 Metagenome Rhizosphere
3 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
4 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
5 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
17 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
18 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
19 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
20 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
21 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
24 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
25 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
28 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
29 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
30 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
31 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
32 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
37 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
38 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
39 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
40 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
47 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
48 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
49 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
50 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
51 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
52 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
53 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
54 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
55 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
56 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
57 3300020069 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
58 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
59 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
60 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
61 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
62 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
63 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
64 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
86 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
88 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
89 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
90 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
91 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
92 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
93 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
94 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
95 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
96 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
97 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
98 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
99 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
100 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
101 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
102 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
103 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
104 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
105 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
106 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
107 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
108 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
109 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
110 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
111 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
112 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
113 3300041997 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0317DE14Z082817_5607 Metagenome Rhizosphere
114 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
115 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
116 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
117 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
118 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
119 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
120 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
121 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
122 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
123 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
124 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
125 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
126 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
127 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
128 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
129 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
130 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
131 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
132 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
133 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
134 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
135 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
136 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
137 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
138 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
139 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
140 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
141 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
142 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
143 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
154 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
159 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
160 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
161 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
162 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
163 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
164 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
165 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
166 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
167 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
168 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
169 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
170 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
171 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
172 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
173 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
175 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
176 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
177 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
178 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
179 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
180 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
181 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
182 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
183 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
184 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
185 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
186 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
187 2643221561 Nocardioides sp. Root151 Isolate Unclassified
188 2643221615 Nocardioides sp. Root224 Isolate Unclassified
189 2643221641 Nocardioides sp. Root122 Isolate Unclassified
190 2643221657 Nocardioides sp. Root1257 Isolate Unclassified
191 2643221696 Nocardioides sp. Root140 Isolate Unclassified
192 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
193 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
194 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
195 2837268691 Jiangella endophytica KE2-3 Isolate Rhizosphere
196 2868088558 Phytoactinopolyspora endophytica EGI 60009 Isolate Unclassified
197 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
198 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
199 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
200 8054609563 Nocardioides astragali CGMCC 4.7327 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 93.44
Metatranscriptomes 1.97
Isolates 4.59

Biome Distribution

Category Percentage (%)
Aerial Root 0.66
Bulb 0
Endosphere 4.92
Nodule 0.33
Rhizoplane 6.23
Rhizosphere 82.62
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10198084 3300005327 Bacteria 1694
2 JGI24750J21931_1004497 3300002070 Bacteria 1691
3 JGI24738J21930_10001662 3300002075 Bacteria 6090
4 JGI24749J21850_1004669 3300002076 Bacteria 1920
5 JGI24744J21845_10006771 3300002077 Bacteria 2371
6 Ga0070683_100028338 3300005329 Bacteria 5061
7 Ga0070683_100081273 3300005329 Bacteria 3034
8 Ga0070670_100195988 3300005331 Bacteria 1755
9 Ga0070682_100084016 3300005337 Bacteria 2068
10 Ga0070682_100119664 3300005337 Bacteria 1766
11 Ga0068868_100026120 3300005338 Bacteria 4448
12 Ga0068868_100132485 3300005338 Bacteria 2041
13 Ga0070687_100009535 3300005343 Bacteria 4165
14 Ga0070687_100159545 3300005343 Bacteria 1332
15 Ga0070692_10005827 3300005345 Bacteria 5298
16 Ga0070669_100040160 3300005353 Bacteria 3401
17 Ga0070675_100039990 3300005354 Bacteria 3827
18 Ga0070674_100035394 3300005356 Bacteria 3344
19 Ga0070673_100054376 3300005364 Bacteria 3149
20 Ga0070659_100077941 3300005366 Bacteria 2644
21 Ga0070659_100215265 3300005366 Bacteria 1584
22 Ga0070709_10049472 3300005434 Bacteria 2629
23 Ga0070713_100115443 3300005436 Bacteria 2347
24 Ga0070701_10010070 3300005438 Bacteria 4167
25 Ga0070711_100129134 3300005439 Bacteria 1880
26 Ga0070705_100263984 3300005440 Bacteria 1216
27 Ga0070700_100008782 3300005441 Bacteria 5518
28 Ga0070678_100111825 3300005456 Bacteria 2138
29 Ga0068867_100043129 3300005459 Bacteria 3302
30 Ga0070685_10054390 3300005466 Bacteria 2322
31 Ga0070698_100030055 3300005471 Bacteria 5637
32 Ga0070679_100212184 3300005530 Bacteria 1899
33 Ga0070684_100047928 3300005535 Bacteria 3705
34 Ga0070684_100157232 3300005535 Bacteria 2061
35 Ga0070672_100041078 3300005543 Bacteria 3553
36 Ga0070686_100023482 3300005544 Bacteria 3685
37 Ga0068854_100015956 3300005578 Bacteria 4994
38 Ga0070702_100036088 3300005615 Bacteria 2736
39 Ga0068852_100010468 3300005616 Bacteria 6934
40 Ga0068861_100003359 3300005719 Bacteria 10606
41 Ga0068861_100033156 3300005719 Bacteria 3808
42 Ga0068860_100002948 3300005843 Bacteria 17594
43 Ga0075365_10003862 3300006038 Bacteria 7831
44 Ga0075365_10031238 3300006038 Bacteria 3416
45 Ga0075365_10047529 3300006038 Bacteria 2821
46 Ga0075364_10033178 3300006051 Bacteria 3322
47 Ga0075364_10100490 3300006051 Bacteria 1925
48 Ga0070712_100091239 3300006175 Bacteria 2232
49 Ga0075362_10013631 3300006177 Bacteria 3259
50 Ga0075367_10008293 3300006178 Bacteria 5380
51 Ga0097621_100159866 3300006237 Bacteria 1936
52 Ga0075428_100082218 3300006844 Bacteria 3515
53 Ga0068865_100017070 3300006881 Bacteria 4660
54 Ga0111539_10451725 3300009094 Bacteria 1496
55 Ga0105245_10011453 3300009098 Bacteria 7724
56 Ga0105245_10452975 3300009098 Bacteria 1292
57 Ga0105243_10007913 3300009148 Bacteria 8163
58 Ga0105248_10031255 3300009177 Bacteria 5951
59 Ga0105238_10375403 3300009551 Bacteria 1413
60 Ga0105249_10039872 3300009553 Bacteria 4264
61 Ga0157372_10017271 3300013307 Bacteria 7747
62 Ga0157372_10410099 3300013307 Bacteria 1579
63 Ga0157375_10044758 3300013308 Bacteria 4304
64 Ga0163163_10130802 3300014325 Bacteria 2550
65 Ga0157380_10005482 3300014326 Bacteria 8865
66 Ga0157380_10028366 3300014326 Bacteria 4267
67 Ga0182008_10016996 3300014497 Bacteria 3774
68 Ga0157376_10276993 3300014969 Bacteria 1578
69 Ga0163161_10014516 3300017792 Bacteria 5485
70 Ga0197907_11514771 3300020069 Bacteria 1011
71 Ga0206352_10898548 3300020078 Bacteria 1237
72 Ga0206350_10092016 3300020080 Bacteria 1969
73 Ga0206354_10832940 3300020081 Bacteria 2232
74 Ga0213876_10005734 3300021384 Bacteria 6804
75 Ga0213875_10000263 3300021388 Bacteria 52579
76 Ga0224712_10000413 3300022467 Bacteria 8442
77 Ga0207688_10015175 3300025901 Bacteria 4178
78 Ga0207699_10040829 3300025906 Bacteria 2676
79 Ga0207693_10107118 3300025915 Bacteria 2193
80 Ga0207662_10038562 3300025918 Bacteria 2800
81 Ga0207659_10029863 3300025926 Bacteria 3719
82 Ga0207687_10114941 3300025927 Bacteria 2004
83 Ga0207687_10377057 3300025927 Bacteria 1161
84 Ga0207690_10010541 3300025932 Bacteria 5498
85 Ga0207690_10055617 3300025932 Bacteria 2666
86 Ga0207686_10025546 3300025934 Bacteria 3437
87 Ga0207709_10011079 3300025935 Bacteria 4973
88 Ga0207669_10260895 3300025937 Bacteria 1296
89 Ga0207704_10010057 3300025938 Bacteria 4594
90 Ga0207691_10006431 3300025940 Bacteria 11347
91 Ga0207691_10343018 3300025940 Bacteria 1278
92 Ga0207661_10013050 3300025944 Bacteria 6063
93 Ga0207651_10164427 3300025960 Bacteria 1743
94 Ga0207668_10199018 3300025972 Bacteria 1594
95 Ga0207640_10017896 3300025981 Bacteria 4154
96 Ga0207708_10001687 3300026075 Bacteria 16343
97 Ga0207708_10011579 3300026075 Bacteria 6573
98 Ga0207648_10009611 3300026089 Bacteria 9251
99 Ga0207648_10060048 3300026089 Bacteria 3316
100 Ga0207675_100011002 3300026118 Bacteria 8474
101 Ga0207675_100039635 3300026118 Bacteria 4397
102 Ga0207683_10208663 3300026121 Bacteria 1777
103 Ga0207698_10232094 3300026142 Bacteria 1676
104 Ga0207428_10109820 3300027907 Bacteria 2124
105 Ga0268264_10009815 3300028381 Bacteria 7923
106 Ga0265330_10044170 3300031235 Bacteria 1969
107 Ga0265320_10069859 3300031240 Bacteria 1657
108 Ga0265325_10025618 3300031241 Bacteria 3201
109 Ga0265340_10015098 3300031247 Bacteria 4019
110 Ga0265314_10020311 3300031711 Bacteria 5128
111 Ga0316576_10001404 3300031727 Bacteria 12898
112 Ga0316576_10028216 3300031727 Bacteria 3954
113 Ga0316578_10070776 3300031728 Bacteria 2065
114 Ga0307405_10508346 3300031731 Bacteria 967
115 Ga0307410_10102655 3300031852 Bacteria 2052
116 Ga0307407_10290582 3300031903 Bacteria 1136
117 Ga0307412_10352368 3300031911 Bacteria 1182
118 Ga0307409_100140427 3300031995 Bacteria 2080
119 Ga0307416_100256097 3300032002 Bacteria 1707
120 Ga0307414_10150146 3300032004 Bacteria 1837
121 Ga0316593_10029615 3300032168 Bacteria 1772
122 Ga0373961_0083046 3300035241 Bacteria 1011
123 Ga0316574_0011220 3300035398 Bacteria 5087
124 Ga0316584_0019534 3300036712 Bacteria 4899
125 Ga0316584_0040609 3300036712 Bacteria 3467
126 Ga0395900_0078093 3300037418 Bacteria 3402
127 Ga0395898_0259220 3300037466 Bacteria 1658
128 Ga0436364_0065152 3300037853 Bacteria 40870
129 Ga0395901_0012965 3300038443 Bacteria 8457
130 Ga0395901_0063434 3300038443 Bacteria 3845
131 Ga0436365_1871915 3300039437 Bacteria 18062
132 Ga0439447_033809 3300041407 Bacteria 1273
133 Ga0439461_0008842 3300041410 Bacteria 1815
134 Ga0451853_1338114 3300041512 Bacteria 2552
135 Ga0451853_1451241 3300041512 Bacteria 876
136 Ga0439431_0006778 3300041997 Bacteria 2542
137 Ga0439442_022701 3300042002 Bacteria 1303
138 Ga0439445_0029444 3300042004 Bacteria 1419
139 Ga0439434_0045944 3300042435 Bacteria 1347
140 Ga0466972_0019690 3300044658 Bacteria 3374
141 Ga0466972_0027287 3300044658 Bacteria 2826
142 Ga0466972_0056777 3300044658 Bacteria 1882
143 Ga0466965_0015340 3300044683 Bacteria 3639
144 Ga0466965_0046016 3300044683 Bacteria 2159
145 Ga0466965_0121217 3300044683 Bacteria 1351
146 Ga0466966_0111071 3300044684 Bacteria 1690
147 Ga0466961_0056990 3300044693 Bacteria 2488
148 Ga0466961_0249711 3300044693 Bacteria 1089
149 Ga0466963_0033931 3300044694 Bacteria 3318
150 Ga0466963_0049878 3300044694 Bacteria 2769
151 Ga0466963_0153522 3300044694 Bacteria 1600
152 Ga0466964_0003466 3300044706 Bacteria 5758
153 Ga0466964_0038237 3300044706 Bacteria 1929
154 Ga0466971_0012057 3300044719 Bacteria 3788
155 Ga0466968_0050541 3300044735 Bacteria 1774
156 Ga0466970_0011608 3300044765 Bacteria 4495
157 Ga0466970_0068737 3300044765 Bacteria 1903
158 Ga0466970_0166236 3300044765 Bacteria 1221
159 Ga0466957_0009205 3300044842 Bacteria 5631
160 Ga0466957_0066427 3300044842 Bacteria 2223
161 Ga0466960_0004970 3300044901 Bacteria 5237
162 Ga0466960_0073584 3300044901 Bacteria 1705
163 Ga0466958_0010281 3300045836 Bacteria 5237
164 Ga0466958_0038935 3300045836 Bacteria 2854
165 Ga0466967_0011500 3300045976 Bacteria 6709
166 Ga0466967_0167199 3300045976 Bacteria 2067
167 Ga0466967_0173701 3300045976 Bacteria 2029
168 Ga0466967_0309748 3300045976 Bacteria 1521
169 Ga0495629_0189978 3300046459 Bacteria 1422
170 Ga0496101_0033493 3300048904 Bacteria 3624
171 Ga0496102_0017913 3300048905 Bacteria 6212
172 Ga0496102_0470840 3300048905 Bacteria 1177
173 Ga0496103_0042697 3300048906 Bacteria 2791
174 Ga0496106_0082346 3300048909 Bacteria 2473
175 Ga0496107_0019292 3300048910 Bacteria 4811
176 Ga0496108_0045092 3300048911 Bacteria 3681
177 Ga0496109_0098481 3300048912 Bacteria 2711
178 Ga0496109_0451746 3300048912 Bacteria 1214
179 Ga0496110_0077647 3300048913 Bacteria 2954
180 Ga0496110_0110395 3300048913 Bacteria 2471
181 Ga0496110_0143328 3300048913 Bacteria 2160
182 Ga0496111_0014661 3300048914 Bacteria 5359
183 Ga0496112_0152362 3300048915 Bacteria 2279
184 Ga0496113_0191456 3300048916 Bacteria 1623
185 Ga0496113_0239768 3300048916 Bacteria 1447
186 Ga0496114_0026180 3300048917 Bacteria 4774
187 Ga0496114_0056235 3300048917 Bacteria 3283
188 Ga0496114_0100450 3300048917 Bacteria 2469
189 Ga0501031_0012492 3300049568 Bacteria 5542
190 Ga0501032_0055284 3300049569 Bacteria 2670
191 Ga0501032_0118276 3300049569 Bacteria 1752
192 Ga0501032_0153632 3300049569 Bacteria 1513
193 Ga0501032_0160969 3300049569 Bacteria 1474
194 Ga0501032_0185685 3300049569 Bacteria 1360
195 Ga0501033_0002108 3300049570 Bacteria 17222
196 Ga0501033_0068091 3300049570 Bacteria 2618
197 Ga0501034_0018366 3300049571 Bacteria 7171
198 Ga0501034_0176262 3300049571 Bacteria 2104
199 Ga0501036_0002673 3300049572 Bacteria 14064
200 Ga0501036_0004245 3300049572 Bacteria 11555
201 Ga0501036_0028816 3300049572 Bacteria 4692
202 Ga0501036_0193431 3300049572 Bacteria 1711
203 Ga0501036_0234077 3300049572 Bacteria 1541
204 Ga0501037_0008882 3300049573 Bacteria 7359
205 Ga0501037_0192189 3300049573 Bacteria 1445
206 Ga0501038_0001411 3300049574 Bacteria 22000
207 Ga0501038_0018612 3300049574 Bacteria 6273
208 Ga0501038_0031357 3300049574 Bacteria 4698
209 Ga0501038_0176272 3300049574 Bacteria 1728
210 Ga0501038_0240997 3300049574 Bacteria 1436
211 Ga0501039_0009537 3300049575 Bacteria 7399
212 Ga0501039_0067191 3300049575 Bacteria 2784
213 Ga0501039_0226544 3300049575 Bacteria 1469
214 Ga0501040_0010477 3300049576 Bacteria 6063
215 Ga0501040_0104936 3300049576 Bacteria 1974
216 Ga0501040_0106539 3300049576 Bacteria 1959
217 Ga0501041_0009702 3300049577 Bacteria 5673
218 Ga0501041_0111378 3300049577 Bacteria 1698
219 Ga0501041_0124346 3300049577 Bacteria 1605
220 Ga0501041_0301590 3300049577 Bacteria 1009
221 Ga0501042_0033950 3300049578 Bacteria 3618
222 Ga0501042_0072281 3300049578 Bacteria 2468
223 Ga0501043_0066942 3300049579 Bacteria 2821
224 Ga0501046_0000841 3300049580 Bacteria 29918
225 Ga0501046_0059665 3300049580 Bacteria 2988
226 Ga0501046_0075044 3300049580 Bacteria 2622
227 Ga0501046_0159704 3300049580 Bacteria 1696
228 Ga0501047_0186146 3300049581 Bacteria 1942
229 Ga0501048_0017189 3300049582 Bacteria 5329
230 Ga0501048_0036564 3300049582 Bacteria 3529
231 Ga0501048_0061078 3300049582 Bacteria 2670
232 Ga0501048_0202665 3300049582 Bacteria 1407
233 Ga0501067_0001853 3300049583 Bacteria 11627
234 Ga0501067_0004736 3300049583 Bacteria 7534
235 Ga0501067_0014271 3300049583 Bacteria 4399
236 Ga0501067_0014995 3300049583 Bacteria 4288
237 Ga0501067_0042241 3300049583 Bacteria 2531
238 Ga0501068_0144223 3300049584 Bacteria 1494
239 Ga0501069_0064270 3300049585 Bacteria 2051
240 Ga0501070_0002841 3300049586 Bacteria 15113
241 Ga0501070_0004298 3300049586 Bacteria 12249
242 Ga0501070_0006947 3300049586 Bacteria 9628
243 Ga0501070_0042735 3300049586 Bacteria 3774
244 Ga0501071_0009400 3300049587 Bacteria 6511
245 Ga0501072_0007946 3300049588 Bacteria 8054
246 Ga0501072_0014447 3300049588 Bacteria 6050
247 Ga0501072_0037435 3300049588 Bacteria 3805
248 Ga0501072_0186356 3300049588 Bacteria 1655
249 Ga0501073_0005390 3300049589 Bacteria 9584
250 Ga0501073_0006321 3300049589 Bacteria 8825
251 Ga0501073_0015203 3300049589 Bacteria 5582
252 Ga0501073_0082549 3300049589 Bacteria 2236
253 Ga0501073_0187572 3300049589 Bacteria 1431
254 Ga0501074_0000838 3300049590 Bacteria 19549
255 Ga0501074_0004634 3300049590 Bacteria 9846
256 Ga0501074_0026566 3300049590 Bacteria 4198
257 Ga0501074_0064822 3300049590 Bacteria 2630
258 Ga0501075_0150678 3300049591 Bacteria 1773
259 Ga0501076_0041752 3300049592 Bacteria 3610
260 Ga0501077_0024431 3300049593 Bacteria 3838
261 Ga0501077_0094641 3300049593 Bacteria 1894
262 Ga0501079_0000560 3300049741 Bacteria 24402
263 Ga0501079_0032168 3300049741 Bacteria 4032
264 Ga0501079_0103620 3300049741 Bacteria 2207
265 Ga0501080_0001095 3300049742 Bacteria 22325
266 Ga0501080_0031745 3300049742 Bacteria 4922
267 Ga0501081_0289940 3300049743 Bacteria 1199
268 Ga0501083_0004571 3300049744 Bacteria 9774
269 Ga0501035_0105467 3300049822 Bacteria 2471
270 Ga0501035_0236273 3300049822 Bacteria 1556
271 Ga0501044_0015701 3300049823 Bacteria 8155
272 Ga0501044_0059956 3300049823 Bacteria 3898
273 Ga0501045_0021166 3300049824 Bacteria 4650
274 Ga0501045_0088321 3300049824 Bacteria 2290
275 nmdc:mga00v17_16414_c1 3300050491 Bacteria 4173
276 nmdc:mga00v17_70429_c1 3300050491 Bacteria 2166
277 nmdc:mga0yw44_13159_c1 3300050492 Bacteria 4345
278 nmdc:mga0yw44_168634_c1 3300050492 Bacteria 1437
279 nmdc:mga0yw44_4649_c1 3300050492 Bacteria 6340
280 nmdc:mga06z11_58766_c1 3300050494 Bacteria 1996
281 nmdc:mga08y16_201672_c1 3300050511 Bacteria 2061
282 Ga0495601_0079304 3300053077 Bacteria 2105
283 Ga0495619_0285354 3300053085 Bacteria 1144
284 Ga0500556_0000842 3300053104 Bacteria 17570
285 Ga0500573_0005104 3300053140 Bacteria 6998
286 Ga0501084_0008229 3300054114 Bacteria 8603
287 Ga0501084_0059266 3300054114 Bacteria 3204
288 Ga0501084_0293334 3300054114 Bacteria 1373
289 Ga0466962_0017816 3300061719 Bacteria 3418
290 Ga0530510_0019057 3300061734 Bacteria 4867
291 Ga0530510_0094819 3300061734 Bacteria 2180
292 2643825468 2643221561 Bacteria 4984412
293 2644089698 2643221615 Bacteria 5487866
294 2644229016 2643221641 Bacteria 4490190
295 2644319543 2643221657 Bacteria 5490246
296 2644531464 2643221696 Bacteria 5431823
297 2774393493 2773857762 Bacteria 5971770
298 2809195615 2808606439 Bacteria 5952208
299 2812350519 2811994878 Bacteria 5992952
300 2837275766 2837268691 Bacteria 7850704
301 2868094492 2868088558 Bacteria 7609351
302 2891971884 2891968417 Bacteria 5821697
303 2984576997 2984576629 Bacteria 4248407
304 2990258744 2990256926 Bacteria 4252839
305 8054612619 8054609563 Bacteria 5170090
306 Ga0070658_10198084
307 JGI24750J21931_1004497
308 JGI24738J21930_10001662
309 JGI24749J21850_1004669
310 JGI24744J21845_10006771
311 Ga0070683_100028338
312 Ga0070683_100081273
313 Ga0070670_100195988
314 Ga0070682_100084016
315 Ga0070682_100119664
316 Ga0068868_100026120
317 Ga0068868_100132485
318 Ga0070687_100009535
319 Ga0070687_100159545
320 Ga0070692_10005827
321 Ga0070669_100040160
322 Ga0070675_100039990
323 Ga0070674_100035394
324 Ga0070673_100054376
325 Ga0070659_100077941
326 Ga0070659_100215265
327 Ga0070709_10049472
328 Ga0070713_100115443
329 Ga0070701_10010070
330 Ga0070711_100129134
331 Ga0070705_100263984
332 Ga0070700_100008782
333 Ga0070678_100111825
334 Ga0068867_100043129
335 Ga0070685_10054390
336 Ga0070698_100030055
337 Ga0070679_100212184
338 Ga0070684_100047928
339 Ga0070684_100157232
340 Ga0070672_100041078
341 Ga0070686_100023482
342 Ga0068854_100015956
343 Ga0070702_100036088
344 Ga0068852_100010468
345 Ga0068861_100003359
346 Ga0068861_100033156
347 Ga0068860_100002948
348 Ga0075365_10003862
349 Ga0075365_10031238
350 Ga0075365_10047529
351 Ga0075364_10033178
352 Ga0075364_10100490
353 Ga0070712_100091239
354 Ga0075362_10013631
355 Ga0075367_10008293
356 Ga0097621_100159866
357 Ga0075428_100082218
358 Ga0068865_100017070
359 Ga0111539_10451725
360 Ga0105245_10011453
361 Ga0105245_10452975
362 Ga0105243_10007913
363 Ga0105248_10031255
364 Ga0105238_10375403
365 Ga0105249_10039872
366 Ga0157372_10017271
367 Ga0157372_10410099
368 Ga0157375_10044758
369 Ga0163163_10130802
370 Ga0157380_10005482
371 Ga0157380_10028366
372 Ga0182008_10016996
373 Ga0157376_10276993
374 Ga0163161_10014516
375 Ga0197907_11514771
376 Ga0206352_10898548
377 Ga0206350_10092016
378 Ga0206354_10832940
379 Ga0213876_10005734
380 Ga0213875_10000263
381 Ga0224712_10000413
382 Ga0207688_10015175
383 Ga0207699_10040829
384 Ga0207693_10107118
385 Ga0207662_10038562
386 Ga0207659_10029863
387 Ga0207687_10114941
388 Ga0207687_10377057
389 Ga0207690_10010541
390 Ga0207690_10055617
391 Ga0207686_10025546
392 Ga0207709_10011079
393 Ga0207669_10260895
394 Ga0207704_10010057
395 Ga0207691_10006431
396 Ga0207691_10343018
397 Ga0207661_10013050
398 Ga0207651_10164427
399 Ga0207668_10199018
400 Ga0207640_10017896
401 Ga0207708_10001687
402 Ga0207708_10011579
403 Ga0207648_10009611
404 Ga0207648_10060048
405 Ga0207675_100011002
406 Ga0207675_100039635
407 Ga0207683_10208663
408 Ga0207698_10232094
409 Ga0207428_10109820
410 Ga0268264_10009815
411 Ga0265330_10044170
412 Ga0265320_10069859
413 Ga0265325_10025618
414 Ga0265340_10015098
415 Ga0265314_10020311
416 Ga0316576_10001404
417 Ga0316576_10028216
418 Ga0316578_10070776
419 Ga0307405_10508346
420 Ga0307410_10102655
421 Ga0307407_10290582
422 Ga0307412_10352368
423 Ga0307409_100140427
424 Ga0307416_100256097
425 Ga0307414_10150146
426 Ga0316593_10029615
427 Ga0373961_0083046
428 Ga0316574_0011220
429 Ga0316584_0019534
430 Ga0316584_0040609
431 Ga0395900_0078093
432 Ga0395898_0259220
433 Ga0436364_0065152
434 Ga0395901_0012965
435 Ga0395901_0063434
436 Ga0436365_1871915
437 Ga0439447_033809
438 Ga0439461_0008842
439 Ga0451853_1338114
440 Ga0451853_1451241
441 Ga0439431_0006778
442 Ga0439442_022701
443 Ga0439445_0029444
444 Ga0439434_0045944
445 Ga0466972_0019690
446 Ga0466972_0027287
447 Ga0466972_0056777
448 Ga0466965_0015340
449 Ga0466965_0046016
450 Ga0466965_0121217
451 Ga0466966_0111071
452 Ga0466961_0056990
453 Ga0466961_0249711
454 Ga0466963_0033931
455 Ga0466963_0049878
456 Ga0466963_0153522
457 Ga0466964_0003466
458 Ga0466964_0038237
459 Ga0466971_0012057
460 Ga0466968_0050541
461 Ga0466970_0011608
462 Ga0466970_0068737
463 Ga0466970_0166236
464 Ga0466957_0009205
465 Ga0466957_0066427
466 Ga0466960_0004970
467 Ga0466960_0073584
468 Ga0466958_0010281
469 Ga0466958_0038935
470 Ga0466967_0011500
471 Ga0466967_0167199
472 Ga0466967_0173701
473 Ga0466967_0309748
474 Ga0495629_0189978
475 Ga0496101_0033493
476 Ga0496102_0017913
477 Ga0496102_0470840
478 Ga0496103_0042697
479 Ga0496106_0082346
480 Ga0496107_0019292
481 Ga0496108_0045092
482 Ga0496109_0098481
483 Ga0496109_0451746
484 Ga0496110_0077647
485 Ga0496110_0110395
486 Ga0496110_0143328
487 Ga0496111_0014661
488 Ga0496112_0152362
489 Ga0496113_0191456
490 Ga0496113_0239768
491 Ga0496114_0026180
492 Ga0496114_0056235
493 Ga0496114_0100450
494 Ga0501031_0012492
495 Ga0501032_0055284
496 Ga0501032_0118276
497 Ga0501032_0153632
498 Ga0501032_0160969
499 Ga0501032_0185685
500 Ga0501033_0002108
501 Ga0501033_0068091
502 Ga0501034_0018366
503 Ga0501034_0176262
504 Ga0501036_0002673
505 Ga0501036_0004245
506 Ga0501036_0028816
507 Ga0501036_0193431
508 Ga0501036_0234077
509 Ga0501037_0008882
510 Ga0501037_0192189
511 Ga0501038_0001411
512 Ga0501038_0018612
513 Ga0501038_0031357
514 Ga0501038_0176272
515 Ga0501038_0240997
516 Ga0501039_0009537
517 Ga0501039_0067191
518 Ga0501039_0226544
519 Ga0501040_0010477
520 Ga0501040_0104936
521 Ga0501040_0106539
522 Ga0501041_0009702
523 Ga0501041_0111378
524 Ga0501041_0124346
525 Ga0501041_0301590
526 Ga0501042_0033950
527 Ga0501042_0072281
528 Ga0501043_0066942
529 Ga0501046_0000841
530 Ga0501046_0059665
531 Ga0501046_0075044
532 Ga0501046_0159704
533 Ga0501047_0186146
534 Ga0501048_0017189
535 Ga0501048_0036564
536 Ga0501048_0061078
537 Ga0501048_0202665
538 Ga0501067_0001853
539 Ga0501067_0004736
540 Ga0501067_0014271
541 Ga0501067_0014995
542 Ga0501067_0042241
543 Ga0501068_0144223
544 Ga0501069_0064270
545 Ga0501070_0002841
546 Ga0501070_0004298
547 Ga0501070_0006947
548 Ga0501070_0042735
549 Ga0501071_0009400
550 Ga0501072_0007946
551 Ga0501072_0014447
552 Ga0501072_0037435
553 Ga0501072_0186356
554 Ga0501073_0005390
555 Ga0501073_0006321
556 Ga0501073_0015203
557 Ga0501073_0082549
558 Ga0501073_0187572
559 Ga0501074_0000838
560 Ga0501074_0004634
561 Ga0501074_0026566
562 Ga0501074_0064822
563 Ga0501075_0150678
564 Ga0501076_0041752
565 Ga0501077_0024431
566 Ga0501077_0094641
567 Ga0501079_0000560
568 Ga0501079_0032168
569 Ga0501079_0103620
570 Ga0501080_0001095
571 Ga0501080_0031745
572 Ga0501081_0289940
573 Ga0501083_0004571
574 Ga0501035_0105467
575 Ga0501035_0236273
576 Ga0501044_0015701
577 Ga0501044_0059956
578 Ga0501045_0021166
579 Ga0501045_0088321
580 nmdc:mga00v17_16414_c1
581 nmdc:mga00v17_70429_c1
582 nmdc:mga0yw44_13159_c1
583 nmdc:mga0yw44_168634_c1
584 nmdc:mga0yw44_4649_c1
585 nmdc:mga06z11_58766_c1
586 nmdc:mga08y16_201672_c1
587 Ga0495601_0079304
588 Ga0495619_0285354
589 Ga0500556_0000842
590 Ga0500573_0005104
591 Ga0501084_0008229
592 Ga0501084_0059266
593 Ga0501084_0293334
594 Ga0466962_0017816
595 Ga0530510_0019057
596 Ga0530510_0094819
597 2643825468
598 2644089698
599 2644229016
600 2644319543
601 2644531464
602 2774393493
603 2809195615
604 2812350519
605 2837275766
606 2868094492
607 2891971884
608 2984576997
609 2990258744
610 8054612619

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01435

Peptidase_M48

Peptidase family M48

76

293

0.87

Structural Annotation

Top 5 Hits

ID Description Score Start End
3cqb-assembly1.cif.gz_A crystal structure of heat shock protein htpx domain from vibrio parahaemolyticus rimd 2210633 0.9129 78 158
3cqb-assembly1.cif.gz_B crystal structure of heat shock protein htpx domain from vibrio parahaemolyticus rimd 2210633 0.8984 71 155
3cqb-assembly1.cif.gz_B crystal structure of heat shock protein htpx domain from vibrio parahaemolyticus rimd 2210633 0.7564 71 155
3cqb-assembly1.cif.gz_A crystal structure of heat shock protein htpx domain from vibrio parahaemolyticus rimd 2210633 0.7186 78 158
6sar-assembly1.cif.gz_A e coli bepa/yfgc 0.697 60 294
ID Description Score Start End Superfamily
af_P9WHS5_62_152_3.30.2010.10 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.9802 77 165 3.30.2010.10
af_Q59076_58_147_3.30.2010.10 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.9693 78 166 3.30.2010.10
af_P9WHS5_62_152_3.30.2010.10 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.9487 77 165 3.30.2010.10
af_Q59076_58_147_3.30.2010.10 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.9485 78 166 3.30.2010.10
af_O53978_67_150_3.30.2010.10 "Alpha Beta;2-Layer Sandwich;Zincin-like;Metalloproteases (""zincins""), catalytic domain" 0.9261 82 159 3.30.2010.10
ID Description Score Start End GO Terms
AF-A0A6B3I2P7-F1-model_v4 M48 family metalloprotease 0.99 70 159 GO:0004222
GO:0005886
GO:0006508
GO:0046872
AF-A0A528D7J6-F1-model_v4 Protease HtpX 0.9883 77 154 GO:0004222
GO:0005886
GO:0006508
GO:0046872
AF-A0A7C7PYT0-F1-model_v4 Protease HtpX 0.9411 27 130 GO:0006508
GO:0008233
GO:0016020
AF-A0A377CHR2-F1-model_v4 M48B family peptidase (EC 3.4.24.-) 0.9398 70 158 GO:0004222
GO:0005886
GO:0006508
GO:0046872
AF-A0A528D7J6-F1-model_v4 Protease HtpX 0.9185 77 154 GO:0004222
GO:0005886
GO:0006508
GO:0046872

Map