F397307

General Info

Members Datasets Scaffolds Average Seq Length
303 194 606 322

Family's Representative Sequence

Representative Sequence 3300053136|Ga0500559_0004687|Ga0500559_0004687_4190_5278
Length 362
Sequence MIFSPGTWKSRISVYFTHYHLTERKTPHKRASYTQLNPKGNQSVMKAAIVQGAGQSPVYGEFSEPQPREGECRVSVTAAAMSHVVKSRASGAHYSSTGHFPFVAGIDGTGRLDDGRRVYFVLPSAPHGSMAECTVVATTQCVALPDELDDMTAAAIANPGMSSWAAYTERARLRSGETVLVNGATGTSGRLAVQIARQLGAKKIIATGRNREALKSLAALGADVTIELSADGRALEGAFKEQFATGVDVVIDYLWGQSAERLLIAAAKAGPDAIPIRFVQVGSVSGPEIALPSAVLRSSAIELMGSGIGSIPLDRMVHAIGELLCAAVPGGFRIATTPVPLSEVERAWPEDDSTRRTVFTMG

Samples

Sample ID Description Type Environment
1 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
2 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
3 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
4 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
13 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
14 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
15 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
16 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
17 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
18 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
19 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
20 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
21 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
22 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
23 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
24 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
25 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
26 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
27 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
28 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
29 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
30 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
31 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
32 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
33 3300015265 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-103_1 MetaG Metagenome Rhizosphere
34 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
35 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
36 3300025253 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
37 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
38 3300025284 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB (SPAdes) (version 2) Metagenome Endosphere
39 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
40 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
41 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
42 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
52 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
53 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
54 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
55 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
56 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
57 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
58 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
59 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
60 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
61 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
62 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
63 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
64 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
65 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
66 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
67 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
68 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
69 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
70 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
71 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
72 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
73 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
74 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
75 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
76 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
77 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
78 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
79 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
80 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
81 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
82 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
83 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
84 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
85 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
86 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
87 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
88 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
89 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
90 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
91 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
92 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
93 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
94 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
95 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
96 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
97 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
98 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
99 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
100 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
101 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
102 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
103 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
104 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
105 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
106 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
107 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
108 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
109 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
110 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
111 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
112 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
113 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
114 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
115 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
116 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
117 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
118 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
119 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
120 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
121 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
122 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
123 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
124 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
125 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
126 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
127 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
128 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
129 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
130 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
131 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
132 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
133 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
134 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
142 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
143 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
144 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
145 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
146 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
147 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
149 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
150 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
151 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
152 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
153 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
154 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
155 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
156 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
157 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
158 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
159 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
160 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
161 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
162 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
163 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
164 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
165 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
166 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
167 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
168 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
169 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
170 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
171 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
172 2510065059 Mesorhizobium ciceri WSM4083 Isolate Nodule
173 2510917022 Rhizobium sp. AP16 Isolate Rhizosphere
174 2512875024
175 2513237087 Azorhizobium doebereinerae UFLA1-100 Isolate Nodule
176 2513237164 Mesorhizobium loti CJ3sym Isolate Nodule
177 2582581307 Rhizobium sp. YR060 Isolate Rhizosphere
178 2582581308 Rhizobium sp. OK494 Isolate Rhizosphere
179 2582581315 Agrobacterium rhizogenes YR147 Isolate Rhizosphere
180 2585427527 Rhizobium lusitanum YR374 Isolate Rhizosphere
181 2585427530 Rhizobium tropici YR635 Isolate Rhizosphere
182 2585427531 Agrobacterium rhizogenes YR530 Isolate Rhizosphere
183 2585427608 Agrobacterium rhizogenes OV677 Isolate Rhizosphere
184 2585427609 Agrobacterium rhizogenes CF263 Isolate Rhizosphere
185 2585428125 Agrobacterium rhizogenes CF262 Isolate Rhizosphere
186 2615840626 Rhizobium lusitanum P1-7 Isolate Nodule
187 2738543031 Pleomorphomonas sp. CF100 Isolate Unclassified
188 2818991453 Rhizobium lusitanum 1158 Isolate Unclassified
189 2842509118 Rhizobium paranaense SEMIA 4064 Isolate Nodule
190 2871451962 Mesorhizobium sp. M7A.F.Ca.US.006.01.1.1 Isolate Nodule
191 2904434214 Robbsia andropogonis 1567 Isolate Rhizosphere
192 2970489779 Mesorhizobium sp. M7A.F.Ca.US.008.03.1.1 Isolate Nodule
193 2984572630 Chryseobacterium sp. SORGH_AS909 Isolate Aerial Root
194 2984606641 Chryseobacterium sp. SORGH_AS1175 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 92.41
Metatranscriptomes 0
Isolates 7.59

Biome Distribution

Category Percentage (%)
Aerial Root 0.66
Bulb 0
Endosphere 16.5
Nodule 2.64
Rhizoplane 1.65
Rhizosphere 67.66
Stem 0
Stem Tuber 0
Unclassified 4.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500559_0004687 3300053136 Bacteria 6438
2 JGI25151J46595_10000880 3300003187 Bacteria 23701
3 JGI25165J46597_1003900 3300003214 Bacteria 3448
4 JGI25165J46597_1006877 3300003214 Bacteria 1964
5 rootH1_10100513 3300003316 Bacteria 1680
6 rootH1_10370973 3300003323 Bacteria 3550
7 Ga0065165_1005610 3300005262 Bacteria 6952
8 Ga0070658_10018102 3300005327 Bacteria 5635
9 Ga0070658_10146087 3300005327 Unclassified 1978
10 Ga0070680_100186154 3300005336 Bacteria 1749
11 Ga0070674_100201735 3300005356 Bacteria 1536
12 Ga0070659_100020586 3300005366 Bacteria 5014
13 Ga0070667_100217406 3300005367 Bacteria 1700
14 Ga0070662_100283658 3300005457 Bacteria 1341
15 Ga0070681_10368010 3300005458 Bacteria 1348
16 Ga0070707_100007380 3300005468 Bacteria 10211
17 Ga0070665_100027689 3300005548 Bacteria 5706
18 Ga0068855_100130723 3300005563 Bacteria 2868
19 Ga0068856_100051695 3300005614 Bacteria 4051
20 Ga0068851_10056989 3300005834 Bacteria 1994
21 Ga0075363_100050740 3300006048 Bacteria 2211
22 Ga0070712_100054317 3300006175 Bacteria 2800
23 Ga0075370_10002557 3300006353 Bacteria 8469
24 Ga0105240_10000013 3300009093 Bacteria 483458
25 Ga0105243_10024871 3300009148 Bacteria 4572
26 Ga0105237_10001533 3300009545 Bacteria 30234
27 Ga0105237_10003586 3300009545 Bacteria 18364
28 Ga0105238_10188919 3300009551 Unclassified 2036
29 Ga0105239_10000047 3300010375 Bacteria 179834
30 Ga0105239_10005948 3300010375 Bacteria 14196
31 Ga0105239_10148278 3300010375 Bacteria 2617
32 Ga0157371_10318660 3300013102 Bacteria 1128
33 Ga0157370_10000209 3300013104 Bacteria 74351
34 Ga0157370_10057156 3300013104 Bacteria 3711
35 Ga0157369_10012662 3300013105 Bacteria 9565
36 Ga0157369_10100162 3300013105 Bacteria 3089
37 Ga0157369_10612950 3300013105 Unclassified 1123
38 Ga0157374_10015325 3300013296 Bacteria 6723
39 Ga0163162_10000043 3300013306 Bacteria 129324
40 Ga0157372_10499180 3300013307 Bacteria 1419
41 Ga0182005_1003085 3300015265 Bacteria 5746
42 Ga0213876_10114190 3300021384 Bacteria 1433
43 Ga0207427_105486 3300025231 Bacteria 1777
44 Ga0209677_100309 3300025253 Bacteria 31966
45 Ga0209233_1000489 3300025261 Bacteria 24014
46 Ga0209233_1000773 3300025261 Bacteria 14422
47 Ga0209130_1000345 3300025284 Bacteria 53433
48 Ga0209025_1000957 3300025294 Bacteria 43532
49 Ga0209758_1004780 3300025297 Bacteria 10959
50 Ga0207426_1000065 3300025302 Bacteria 353625
51 Ga0207695_10000044 3300025913 Bacteria 440819
52 Ga0207695_10237779 3300025913 Bacteria 1724
53 Ga0207671_10000226 3300025914 Bacteria 84886
54 Ga0207671_10001214 3300025914 Bacteria 30625
55 Ga0207693_10065636 3300025915 Bacteria 2842
56 Ga0207646_10013211 3300025922 Bacteria 7901
57 Ga0207690_10047962 3300025932 Bacteria 2837
58 Ga0207706_10250968 3300025933 Bacteria 1545
59 Ga0207709_10024807 3300025935 Bacteria 3428
60 Ga0207702_10106003 3300026078 Bacteria 2490
61 Ga0207683_10400224 3300026121 Bacteria 1263
62 Ga0265319_1020064 3300028563 Bacteria 2485
63 Ga0265336_10010995 3300028666 Bacteria 3084
64 Ga0307517_10197437 3300028786 Bacteria 1264
65 Ga0307515_10163534 3300028794 Bacteria 2256
66 Ga0265338_10022080 3300028800 Bacteria 6609
67 Ga0265338_10121511 3300028800 Bacteria 2081
68 Ga0265330_10062183 3300031235 Bacteria 1624
69 Ga0265332_10013965 3300031238 Bacteria 3554
70 Ga0265325_10004490 3300031241 Bacteria 8804
71 Ga0265325_10015550 3300031241 Bacteria 4276
72 Ga0265325_10020145 3300031241 Bacteria 3679
73 Ga0265325_10023738 3300031241 Bacteria 3343
74 Ga0265329_10032174 3300031242 Bacteria 1700
75 Ga0265340_10002036 3300031247 Bacteria 11581
76 Ga0265339_10000754 3300031249 Bacteria 24980
77 Ga0265339_10012097 3300031249 Bacteria 5285
78 Ga0265339_10022763 3300031249 Bacteria 3626
79 Ga0265331_10006692 3300031250 Bacteria 6766
80 Ga0265331_10107310 3300031250 Bacteria 1282
81 Ga0265316_10005374 3300031344 Bacteria 12463
82 Ga0265316_10052613 3300031344 Bacteria 3194
83 Ga0265316_10059792 3300031344 Bacteria 2963
84 Ga0265316_10107670 3300031344 Bacteria 2113
85 Ga0265316_10128830 3300031344 Bacteria 1907
86 Ga0265313_10001105 3300031595 Bacteria 25794
87 Ga0265313_10001756 3300031595 Bacteria 19879
88 Ga0265313_10006086 3300031595 Bacteria 8688
89 Ga0307508_10135697 3300031616 Bacteria 2064
90 Ga0307508_10365831 3300031616 Bacteria 1033
91 Ga0265314_10000171 3300031711 Bacteria 96521
92 Ga0265314_10002463 3300031711 Bacteria 18920
93 Ga0265314_10013157 3300031711 Bacteria 6702
94 Ga0265314_10015361 3300031711 Bacteria 6079
95 Ga0265314_10032463 3300031711 Bacteria 3841
96 Ga0265342_10092649 3300031712 Bacteria 1730
97 Ga0307516_10008428 3300031730 Bacteria 11683
98 Ga0373924_0005736 3300035410 Bacteria 4412
99 Ga0373935_0013757 3300035692 Bacteria 4886
100 Ga0373935_0056096 3300035692 Bacteria 2511
101 Ga0373927_0000135 3300035695 Bacteria 56787
102 Ga0373947_0014899 3300035725 Bacteria 4462
103 Ga0373947_0058510 3300035725 Unclassified 2336
104 Ga0373937_0062067 3300036401 Unclassified 3435
105 Ga0373925_0001135 3300037068 Bacteria 23635
106 Ga0395905_0013147 3300037471 Bacteria 7944
107 Ga0436365_1122252 3300039437 Bacteria 1358
108 Ga0436365_1128879 3300039437 Bacteria 5494
109 Ga0436365_1707158 3300039437 Bacteria 2252
110 Ga0436360_0705841 3300039438 Bacteria 1111
111 Ga0436361_0638715 3300039447 Bacteria 1679
112 Ga0466969_0028645 3300044656 Bacteria 2846
113 Ga0466966_0156446 3300044684 Bacteria 1388
114 Ga0466963_0293677 3300044694 Bacteria 1143
115 Ga0495592_0039296 3300046454 Bacteria 3555
116 Ga0495651_0000133 3300046462 Bacteria 55122
117 Ga0495651_0013565 3300046462 Bacteria 6301
118 Ga0495651_0025452 3300046462 Bacteria 4606
119 Ga0495653_0010359 3300046463 Bacteria 7626
120 Ga0495653_0033592 3300046463 Unclassified 4063
121 Ga0495653_0272416 3300046463 Unclassified 1114
122 Ga0495580_0080159 3300046472 Unclassified 2276
123 Ga0495664_0021810 3300046477 Unclassified 3702
124 Ga0495664_0058831 3300046477 Bacteria 2287
125 Ga0495583_0000777 3300046506 Bacteria 39942
126 Ga0495606_0000087 3300046507 Bacteria 156407
127 Ga0495606_0000329 3300046507 Bacteria 81972
128 Ga0495608_0003451 3300046511 Bacteria 11320
129 Ga0495608_0004678 3300046511 Bacteria 9788
130 Ga0495618_0035955 3300046514 Bacteria 3108
131 Ga0495628_0001222 3300046516 Bacteria 23518
132 Ga0495628_0010927 3300046516 Bacteria 7690
133 Ga0495666_0005274 3300046526 Bacteria 6522
134 Ga0495652_0003874 3300046529 Bacteria 14587
135 Ga0495652_0019222 3300046529 Bacteria 6084
136 Ga0495665_0117915 3300046531 Unclassified 1390
137 Ga0495640_0113630 3300046533 Unclassified 1766
138 Ga0495586_0016837 3300046535 Bacteria 3890
139 Ga0495587_0001626 3300046536 Bacteria 14957
140 Ga0495645_0018512 3300046543 Bacteria 5004
141 Ga0495645_0033065 3300046543 Bacteria 3772
142 Ga0495667_0001796 3300046559 Bacteria 14239
143 Ga0495667_0006329 3300046559 Bacteria 8034
144 Ga0495667_0054841 3300046559 Bacteria 2622
145 Ga0495668_0026371 3300046616 Bacteria 3298
146 Ga0495668_0097804 3300046616 Bacteria 1606
147 Ga0495611_0139523 3300046648 Bacteria 1132
148 Ga0495657_0018739 3300046675 Bacteria 5002
149 Ga0495657_0055294 3300046675 Bacteria 2648
150 Ga0495599_0005027 3300046678 Bacteria 7865
151 Ga0495623_0095326 3300046679 Bacteria 1819
152 Ga0495646_0001805 3300046680 Bacteria 12849
153 Ga0495613_0051376 3300046689 Bacteria 3038
154 Ga0495624_0000494 3300046690 Bacteria 30685
155 Ga0495589_0007307 3300046794 Bacteria 5789
156 Ga0495600_0002188 3300046809 Bacteria 11109
157 Ga0495604_0002666 3300047317 Bacteria 14326
158 Ga0495604_0007700 3300047317 Bacteria 8533
159 Ga0495674_0000790 3300047319 Bacteria 30024
160 Ga0495674_0030131 3300047319 Unclassified 4937
161 Ga0495672_0046124 3300047320 Bacteria 2601
162 Ga0495680_0005806 3300047322 Bacteria 11551
163 Ga0495680_0008030 3300047322 Bacteria 9625
164 Ga0495675_0000072 3300047444 Bacteria 70487
165 Ga0495675_0003166 3300047444 Bacteria 9883
166 Ga0495675_0019016 3300047444 Bacteria 4362
167 Ga0495684_0000740 3300047471 Bacteria 26347
168 Ga0495684_0008458 3300047471 Bacteria 7966
169 Ga0495684_0008953 3300047471 Bacteria 7731
170 Ga0495686_0000458 3300047472 Bacteria 61256
171 Ga0495686_0016317 3300047472 Bacteria 5039
172 Ga0495686_0061132 3300047472 Bacteria 2340
173 Ga0495593_0013802 3300047673 Bacteria 4602
174 Ga0495602_0003847 3300048088 Bacteria 15621
175 Ga0495602_0011602 3300048088 Bacteria 9103
176 Ga0495602_0237808 3300048088 Unclassified 1364
177 Ga0496100_0014196 3300048903 Bacteria 4618
178 Ga0496102_0016755 3300048905 Bacteria 6408
179 Ga0496103_0019545 3300048906 Bacteria 4067
180 Ga0496113_0190399 3300048916 Bacteria 1628
181 Ga0496115_0252675 3300048918 Bacteria 1451
182 Ga0496117_0001675 3300048920 Bacteria 30978
183 Ga0496117_0147496 3300048920 Bacteria 1398
184 Ga0496118_0005907 3300048921 Bacteria 13698
185 Ga0496119_0010381 3300048922 Bacteria 7844
186 Ga0496119_0038526 3300048922 Bacteria 3087
187 Ga0496119_0178589 3300048922 Bacteria 1115
188 Ga0496120_0000466 3300048923 Bacteria 63527
189 Ga0496120_0011761 3300048923 Bacteria 5994
190 Ga0496121_0017942 3300048924 Bacteria 7178
191 Ga0496121_0023159 3300048924 Bacteria 5994
192 Ga0496122_0019830 3300048925 Bacteria 6120
193 Ga0496123_0024107 3300048926 Bacteria 4635
194 Ga0496124_0010139 3300048927 Bacteria 9590
195 Ga0496125_0011753 3300048928 Bacteria 8726
196 Ga0496125_0034104 3300048928 Bacteria 4491
197 Ga0496126_0003657 3300048929 Bacteria 19210
198 Ga0496126_0012121 3300048929 Bacteria 8850
199 Ga0496126_0054780 3300048929 Bacteria 3610
200 Ga0496126_0112995 3300048929 Bacteria 2364
201 Ga0496126_0161122 3300048929 Bacteria 1917
202 Ga0501031_0128528 3300049568 Bacteria 1655
203 Ga0501031_0167216 3300049568 Bacteria 1437
204 Ga0501033_0003301 3300049570 Bacteria 13331
205 Ga0501034_0114569 3300049571 Bacteria 2684
206 Ga0501034_0309103 3300049571 Bacteria 1516
207 Ga0501037_0007667 3300049573 Bacteria 7900
208 Ga0501037_0024675 3300049573 Bacteria 4445
209 Ga0501037_0116287 3300049573 Bacteria 1925
210 Ga0501037_0128487 3300049573 Bacteria 1818
211 Ga0501038_0123936 3300049574 Bacteria 2128
212 Ga0501038_0176785 3300049574 Bacteria 1725
213 Ga0501043_0080209 3300049579 Bacteria 2564
214 Ga0501043_0262293 3300049579 Bacteria 1328
215 Ga0501047_0003614 3300049581 Bacteria 14574
216 Ga0501047_0023767 3300049581 Bacteria 5884
217 Ga0501047_0050126 3300049581 Bacteria 4031
218 Ga0501047_0121153 3300049581 Bacteria 2498
219 Ga0501047_0449306 3300049581 Bacteria 1118
220 Ga0501068_0285557 3300049584 Bacteria 1055
221 Ga0501069_0080228 3300049585 Bacteria 1837
222 Ga0501070_0000275 3300049586 Bacteria 48299
223 Ga0501070_0001628 3300049586 Bacteria 19920
224 Ga0501070_0215582 3300049586 Bacteria 1575
225 Ga0501072_0115767 3300049588 Bacteria 2135
226 Ga0501073_0041414 3300049589 Bacteria 3255
227 Ga0501073_0090224 3300049589 Bacteria 2130
228 Ga0501073_0228670 3300049589 Bacteria 1285
229 Ga0501080_0014119 3300049742 Bacteria 7352
230 Ga0501080_0063762 3300049742 Bacteria 3429
231 Ga0501035_0001479 3300049822 Bacteria 24052
232 Ga0501035_0024244 3300049822 Bacteria 5564
233 Ga0501035_0061715 3300049822 Bacteria 3336
234 Ga0501035_0075798 3300049822 Bacteria 2975
235 Ga0501044_0006464 3300049823 Bacteria 12945
236 Ga0501044_0008041 3300049823 Bacteria 11583
237 Ga0501044_0016641 3300049823 Bacteria 7896
238 Ga0501044_0022068 3300049823 Bacteria 6789
239 Ga0501044_0034145 3300049823 Bacteria 5338
240 Ga0501044_0247431 3300049823 Bacteria 1725
241 Ga0501044_0402332 3300049823 Bacteria 1281
242 Ga0495601_0192577 3300053077 Bacteria 1332
243 Ga0495612_0002139 3300053078 Bacteria 8122
244 Ga0495612_0086833 3300053078 Bacteria 1320
245 Ga0500610_0139947 3300053079 Bacteria 1223
246 Ga0500635_0010183 3300053080 Bacteria 2633
247 Ga0500635_0013042 3300053080 Bacteria 2403
248 Ga0495595_0045360 3300053084 Bacteria 2022
249 Ga0500647_0012935 3300053091 Bacteria 3766
250 Ga0500566_0000543 3300053094 Bacteria 21114
251 Ga0500640_011826 3300053095 Bacteria 3567
252 Ga0500572_000241 3300053111 Bacteria 19445
253 Ga0500572_000750 3300053111 Bacteria 10445
254 Ga0500595_004020 3300053119 Bacteria 6705
255 Ga0500595_008903 3300053119 Bacteria 4078
256 Ga0500608_049484 3300053122 Bacteria 2021
257 Ga0500614_000295 3300053123 Bacteria 12786
258 Ga0500618_004300 3300053125 Bacteria 4601
259 Ga0500559_0000213 3300053136 Bacteria 46604
260 Ga0500559_0003668 3300053136 Bacteria 7498
261 Ga0500568_0007066 3300053139 Bacteria 5548
262 Ga0500603_008463 3300053150 Bacteria 2282
263 Ga0500616_0000080 3300053153 Bacteria 200381
264 Ga0500616_0000204 3300053153 Bacteria 96997
265 Ga0500616_0003281 3300053153 Bacteria 12485
266 Ga0500630_000096 3300053159 Bacteria 27855
267 Ga0500638_004538 3300053162 Bacteria 5369
268 Ga0500639_000014 3300053163 Bacteria 122926
269 Ga0500639_011585 3300053163 Bacteria 4627
270 Ga0500639_060101 3300053163 Bacteria 1960
271 Ga0500636_0028485 3300053177 Bacteria 3298
272 Ga0500636_0077641 3300053177 Bacteria 1918
273 Ga0500636_0099269 3300053177 Bacteria 1657
274 Ga0500637_0043476 3300053178 Bacteria 2543
275 Ga0500637_0066456 3300053178 Bacteria 2070
276 Ga0500637_0223149 3300053178 Bacteria 1064
277 Ga0500596_000158 3300053735 Bacteria 10524
278 Ga0500596_005667 3300053735 Bacteria 2172
279 Ga0500596_012546 3300053735 Bacteria 1285
280 Ga0500601_000961 3300053737 Bacteria 3362
281 2510315199 2510065059 Bacteria 6847884
282 2511133417 2510917022 Bacteria 6504556
283 2512961924 2512875024 Bacteria 7195110
284 2513590418 2513237087 Bacteria 5817514
285 2514038922 2513237164 Bacteria 7563725
286 2585276719 2582581307 Bacteria 6597605
287 2585280620 2582581308 Bacteria 7413247
288 2585327993 2582581315 Bacteria 7318924
289 2585531555 2585427527 Bacteria 7273426
290 2585551499 2585427530 Bacteria 7383882
291 2585562693 2585427531 Bacteria 6992870
292 2585899335 2585427608 Bacteria 6544331
293 2585908750 2585427609 Bacteria 6667127
294 2587984167 2585428125 Bacteria 6662905
295 2616306836 2615840626 Bacteria 7921970
296 2739350664 2738543031 Bacteria 5769731
297 2819638929 2818991453 Bacteria 7181617
298 2842511856 2842509118 Bacteria 6850950
299 2871455391 2871451962 Bacteria 7336357
300 2904436560 2904434214 Bacteria 6230908
301 2970492890 2970489779 Bacteria 6517260
302 2984574095 2984572630 Bacteria 4186940
303 2984607542 2984606641 Bacteria 4186971
304 Ga0500559_0004687
305 JGI25151J46595_10000880
306 JGI25165J46597_1003900
307 JGI25165J46597_1006877
308 rootH1_10100513
309 rootH1_10370973
310 Ga0065165_1005610
311 Ga0070658_10018102
312 Ga0070658_10146087
313 Ga0070680_100186154
314 Ga0070674_100201735
315 Ga0070659_100020586
316 Ga0070667_100217406
317 Ga0070662_100283658
318 Ga0070681_10368010
319 Ga0070707_100007380
320 Ga0070665_100027689
321 Ga0068855_100130723
322 Ga0068856_100051695
323 Ga0068851_10056989
324 Ga0075363_100050740
325 Ga0070712_100054317
326 Ga0075370_10002557
327 Ga0105240_10000013
328 Ga0105243_10024871
329 Ga0105237_10001533
330 Ga0105237_10003586
331 Ga0105238_10188919
332 Ga0105239_10000047
333 Ga0105239_10005948
334 Ga0105239_10148278
335 Ga0157371_10318660
336 Ga0157370_10000209
337 Ga0157370_10057156
338 Ga0157369_10012662
339 Ga0157369_10100162
340 Ga0157369_10612950
341 Ga0157374_10015325
342 Ga0163162_10000043
343 Ga0157372_10499180
344 Ga0182005_1003085
345 Ga0213876_10114190
346 Ga0207427_105486
347 Ga0209677_100309
348 Ga0209233_1000489
349 Ga0209233_1000773
350 Ga0209130_1000345
351 Ga0209025_1000957
352 Ga0209758_1004780
353 Ga0207426_1000065
354 Ga0207695_10000044
355 Ga0207695_10237779
356 Ga0207671_10000226
357 Ga0207671_10001214
358 Ga0207693_10065636
359 Ga0207646_10013211
360 Ga0207690_10047962
361 Ga0207706_10250968
362 Ga0207709_10024807
363 Ga0207702_10106003
364 Ga0207683_10400224
365 Ga0265319_1020064
366 Ga0265336_10010995
367 Ga0307517_10197437
368 Ga0307515_10163534
369 Ga0265338_10022080
370 Ga0265338_10121511
371 Ga0265330_10062183
372 Ga0265332_10013965
373 Ga0265325_10004490
374 Ga0265325_10015550
375 Ga0265325_10020145
376 Ga0265325_10023738
377 Ga0265329_10032174
378 Ga0265340_10002036
379 Ga0265339_10000754
380 Ga0265339_10012097
381 Ga0265339_10022763
382 Ga0265331_10006692
383 Ga0265331_10107310
384 Ga0265316_10005374
385 Ga0265316_10052613
386 Ga0265316_10059792
387 Ga0265316_10107670
388 Ga0265316_10128830
389 Ga0265313_10001105
390 Ga0265313_10001756
391 Ga0265313_10006086
392 Ga0307508_10135697
393 Ga0307508_10365831
394 Ga0265314_10000171
395 Ga0265314_10002463
396 Ga0265314_10013157
397 Ga0265314_10015361
398 Ga0265314_10032463
399 Ga0265342_10092649
400 Ga0307516_10008428
401 Ga0373924_0005736
402 Ga0373935_0013757
403 Ga0373935_0056096
404 Ga0373927_0000135
405 Ga0373947_0014899
406 Ga0373947_0058510
407 Ga0373937_0062067
408 Ga0373925_0001135
409 Ga0395905_0013147
410 Ga0436365_1122252
411 Ga0436365_1128879
412 Ga0436365_1707158
413 Ga0436360_0705841
414 Ga0436361_0638715
415 Ga0466969_0028645
416 Ga0466966_0156446
417 Ga0466963_0293677
418 Ga0495592_0039296
419 Ga0495651_0000133
420 Ga0495651_0013565
421 Ga0495651_0025452
422 Ga0495653_0010359
423 Ga0495653_0033592
424 Ga0495653_0272416
425 Ga0495580_0080159
426 Ga0495664_0021810
427 Ga0495664_0058831
428 Ga0495583_0000777
429 Ga0495606_0000087
430 Ga0495606_0000329
431 Ga0495608_0003451
432 Ga0495608_0004678
433 Ga0495618_0035955
434 Ga0495628_0001222
435 Ga0495628_0010927
436 Ga0495666_0005274
437 Ga0495652_0003874
438 Ga0495652_0019222
439 Ga0495665_0117915
440 Ga0495640_0113630
441 Ga0495586_0016837
442 Ga0495587_0001626
443 Ga0495645_0018512
444 Ga0495645_0033065
445 Ga0495667_0001796
446 Ga0495667_0006329
447 Ga0495667_0054841
448 Ga0495668_0026371
449 Ga0495668_0097804
450 Ga0495611_0139523
451 Ga0495657_0018739
452 Ga0495657_0055294
453 Ga0495599_0005027
454 Ga0495623_0095326
455 Ga0495646_0001805
456 Ga0495613_0051376
457 Ga0495624_0000494
458 Ga0495589_0007307
459 Ga0495600_0002188
460 Ga0495604_0002666
461 Ga0495604_0007700
462 Ga0495674_0000790
463 Ga0495674_0030131
464 Ga0495672_0046124
465 Ga0495680_0005806
466 Ga0495680_0008030
467 Ga0495675_0000072
468 Ga0495675_0003166
469 Ga0495675_0019016
470 Ga0495684_0000740
471 Ga0495684_0008458
472 Ga0495684_0008953
473 Ga0495686_0000458
474 Ga0495686_0016317
475 Ga0495686_0061132
476 Ga0495593_0013802
477 Ga0495602_0003847
478 Ga0495602_0011602
479 Ga0495602_0237808
480 Ga0496100_0014196
481 Ga0496102_0016755
482 Ga0496103_0019545
483 Ga0496113_0190399
484 Ga0496115_0252675
485 Ga0496117_0001675
486 Ga0496117_0147496
487 Ga0496118_0005907
488 Ga0496119_0010381
489 Ga0496119_0038526
490 Ga0496119_0178589
491 Ga0496120_0000466
492 Ga0496120_0011761
493 Ga0496121_0017942
494 Ga0496121_0023159
495 Ga0496122_0019830
496 Ga0496123_0024107
497 Ga0496124_0010139
498 Ga0496125_0011753
499 Ga0496125_0034104
500 Ga0496126_0003657
501 Ga0496126_0012121
502 Ga0496126_0054780
503 Ga0496126_0112995
504 Ga0496126_0161122
505 Ga0501031_0128528
506 Ga0501031_0167216
507 Ga0501033_0003301
508 Ga0501034_0114569
509 Ga0501034_0309103
510 Ga0501037_0007667
511 Ga0501037_0024675
512 Ga0501037_0116287
513 Ga0501037_0128487
514 Ga0501038_0123936
515 Ga0501038_0176785
516 Ga0501043_0080209
517 Ga0501043_0262293
518 Ga0501047_0003614
519 Ga0501047_0023767
520 Ga0501047_0050126
521 Ga0501047_0121153
522 Ga0501047_0449306
523 Ga0501068_0285557
524 Ga0501069_0080228
525 Ga0501070_0000275
526 Ga0501070_0001628
527 Ga0501070_0215582
528 Ga0501072_0115767
529 Ga0501073_0041414
530 Ga0501073_0090224
531 Ga0501073_0228670
532 Ga0501080_0014119
533 Ga0501080_0063762
534 Ga0501035_0001479
535 Ga0501035_0024244
536 Ga0501035_0061715
537 Ga0501035_0075798
538 Ga0501044_0006464
539 Ga0501044_0008041
540 Ga0501044_0016641
541 Ga0501044_0022068
542 Ga0501044_0034145
543 Ga0501044_0247431
544 Ga0501044_0402332
545 Ga0495601_0192577
546 Ga0495612_0002139
547 Ga0495612_0086833
548 Ga0500610_0139947
549 Ga0500635_0010183
550 Ga0500635_0013042
551 Ga0495595_0045360
552 Ga0500647_0012935
553 Ga0500566_0000543
554 Ga0500640_011826
555 Ga0500572_000241
556 Ga0500572_000750
557 Ga0500595_004020
558 Ga0500595_008903
559 Ga0500608_049484
560 Ga0500614_000295
561 Ga0500618_004300
562 Ga0500559_0000213
563 Ga0500559_0003668
564 Ga0500568_0007066
565 Ga0500603_008463
566 Ga0500616_0000080
567 Ga0500616_0000204
568 Ga0500616_0003281
569 Ga0500630_000096
570 Ga0500638_004538
571 Ga0500639_000014
572 Ga0500639_011585
573 Ga0500639_060101
574 Ga0500636_0028485
575 Ga0500636_0077641
576 Ga0500636_0099269
577 Ga0500637_0043476
578 Ga0500637_0066456
579 Ga0500637_0223149
580 Ga0500596_000158
581 Ga0500596_005667
582 Ga0500596_012546
583 Ga0500601_000961
584 2510315199
585 2511133417
586 2512961924
587 2513590418
588 2514038922
589 2585276719
590 2585280620
591 2585327993
592 2585531555
593 2585551499
594 2585562693
595 2585899335
596 2585908750
597 2587984167
598 2616306836
599 2739350664
600 2819638929
601 2842511856
602 2871455391
603 2904436560
604 2970492890
605 2984574095
606 2984607542

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00107

ADH_zinc_N

Zinc-binding dehydrogenase

189

323

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
1iyz-assembly1.cif.gz_A-2 crystal structures of the quinone oxidoreductase from thermus thermophilus hb8 and its complex with nadph 0.8477 1 317
1iyz-assembly1.cif.gz_A-2 crystal structures of the quinone oxidoreductase from thermus thermophilus hb8 and its complex with nadph 0.8452 1 317
1iz0-assembly1.cif.gz_A crystal structures of the quinone oxidoreductase from thermus thermophilus hb8 and its complex with nadph 0.8359 1 317
1iz0-assembly1.cif.gz_A crystal structures of the quinone oxidoreductase from thermus thermophilus hb8 and its complex with nadph 0.8333 1 317
5yat-assembly1.cif.gz_B crystal structure of mitochondrial alcohol dehydrogenase isozyme iii from komagataella phaffii gs115 0.8316 2 316
ID Description Score Start End Superfamily
af_Q75JW6_1_121_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9546 1 110 3.90.180.10
af_Q75JW6_122_279_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9117 124 271 3.40.50.720
1iz0A01 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.9106 2 110 3.90.180.10
4a27B01 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.8979 1 111 3.90.180.10
af_Q3UNZ8_26_154_3.90.180.10 Alpha Beta;Alpha-Beta Complex;Quinone Oxidoreductase; Chain A, domain 1;Medium-chain alcohol dehydrogenases, catalytic domain 0.8958 2 110 3.90.180.10
ID Description Score Start End GO Terms
AF-A0A4P0Y3K0-F1-model_v4 Quinone oxidoreductase (EC 2.3.1.41) 0.9593 86 318 GO:0004315
GO:0016491
AF-A0A4P0Y3K0-F1-model_v4 Quinone oxidoreductase (EC 2.3.1.41) 0.9553 86 318 GO:0004315
GO:0016491
AF-A0A535Q021-F1-model_v4 Zinc-binding alcohol dehydrogenase family protein 0.9545 1 124 GO:0016491
AF-A0A0E1VZC8-F1-model_v4 Oxidoreductase, zinc-binding dehydrogenase family 0.9443 1 320 GO:0016491
AF-A0A0L8QS47-F1-model_v4 deleted 0.9413 1 316

Map