F397178

General Info

Members Datasets Scaffolds Average Seq Length
303 226 606 263

Family's Representative Sequence

Representative Sequence 3300042438|Ga0439459_0012834|Ga0439459_0012834_307_1209
Length 300
Sequence MPRLAGLTDCGNLSELRLHAYPIGNTERNAKYVQVQMTRYFSAALCSAVTALVSFVAAAQAGECPRKDALGTARVLTVDAATFPRVGLKSFPQTLPLNDREVVLTFDDGPWPPTDRKVLAALAQECVRATFFLIGRNAAAHPELVRRMAAEGHTVAHHSFSHPNLKYLKPDAAIGEIDKGIAAVETALNGAATTTPTTPFFRFPYFAMTPATLEVLQKRGIAVFGADLWASDWTPMKPAQQLKLLTDRLQVARKGIILLHDPKAQTAAMLPAFLRYLRDNHYRVVHLVPVGAKTVSGKAH

Samples

Sample ID Description Type Environment
1 3300042438 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311FE14Z081617_5533 Metagenome Rhizosphere
2 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
3 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
4 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
5 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
22 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
27 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
30 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
33 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
36 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
37 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
38 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
39 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
40 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
44 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
45 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
46 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
47 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
50 3300006944 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW Metagenome Nodule
51 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
52 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
53 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
55 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
58 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
59 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
62 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
63 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
67 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
68 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
69 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
70 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
71 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
72 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
73 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
74 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
75 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300027296 Root nodule microbial communities of legume samples collected from California, USA - Cow pea red BW (SPAdes) (version 2) Metagenome Nodule
98 3300027361 Root nodule microbial communities of legume samples collected from California, USA - Siratro white BW (SPAdes) (version 2) Metagenome Nodule
99 3300027363 Root nodule microbial communities of legume samples collected from California, USA - Siratro red BW (SPAdes) (version 2) Metagenome Nodule
100 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
104 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
105 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
106 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
107 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
108 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
109 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
110 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
111 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
112 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
113 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
114 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
115 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
116 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
117 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
118 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
119 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
120 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
121 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
122 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
123 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
124 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
125 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
126 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
127 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
128 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
129 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
130 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
131 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
132 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
133 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
134 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
135 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
136 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
137 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
138 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
139 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
140 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
141 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
142 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
143 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
144 3300048090 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co1_10_3 rhizosphere Metagenome Rhizosphere
145 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
146 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
147 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
148 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
149 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
150 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
151 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
152 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
153 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
154 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
155 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
156 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
157 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
158 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
159 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
161 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
162 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
163 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
164 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
165 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
166 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
167 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
168 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
169 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
170 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
171 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
172 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
173 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
174 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
175 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
176 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
177 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
178 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
179 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
180 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
181 3300053137 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 endosphere Metagenome Endosphere
182 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
183 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
184 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
185 2513237092 Bradyrhizobium sp. WSM1743 Isolate Nodule
186 2513237139 Bradyrhizobium ottawaense USDA 4 Isolate Nodule
187 2513237161 Bradyrhizobium sp. WSM2793 Isolate Nodule
188 2517093001 Bradyrhizobium japonicum USDA 124 Isolate Nodule
189 2667528175 Rhizobium tropici NFR14 Isolate Rhizoplane
190 2728368998 Bradyrhizobium macuxiense BR 10303 Isolate Nodule
191 2744054633 Bradyrhizobium neotropicale BR 10247 Isolate Unclassified
192 2791355199
193 2802429603 Bradyrhizobium ottawaense L2 Isolate Nodule
194 2824671348 Bradyrhizobium sp. HAMBI 2125 Isolate Unclassified
195 2824687955 Bradyrhizobium sp. HAMBI 2126 Isolate Unclassified
196 2838122688 Bradyrhizobium sp. CIR3A Isolate Nodule
197 2841966195 Bradyrhizobium sp. CIR18 Isolate Nodule
198 2841974524 Bradyrhizobium sp. CIR48 Isolate Nodule
199 2841983080 Bradyrhizobium sp. IAR9 Isolate Nodule
200 2842045827 Bradyrhizobium centrosematis SEMIA 431 Isolate Nodule
201 2847930680 Bradyrhizobium zhanjiangense CCBAU 51778 Isolate Unclassified
202 2847939898 Bradyrhizobium ottawaense OO99 Isolate Unclassified
203 2849076700 Bradyrhizobium symbiodeficiens 85S1MB Isolate Nodule
204 2857509624 Bradyrhizobium sp. R-73088 Isolate Unclassified
205 2874612657 Bradyrhizobium forestalis INPA54B Isolate Nodule
206 2874620515 Bradyrhizobium nanningense CCBAU 53390 Isolate Unclassified
207 2876761206 Bradyrhizobium centrolobii BR 10245 Isolate Nodule
208 2876808645 Bradyrhizobium algeriense RST89 Isolate Unclassified
209 2879083081 Bradyrhizobium zhanjiangense CCBAU 51787 Isolate Unclassified
210 2879110137 Bradyrhizobium algeriense RST91 Isolate Nodule
211 2885409591 Bradyrhizobium sp. NAS80.1 Isolate Unclassified
212 2889033259 Bradyrhizobium sp. CCBAU 051011 Isolate Unclassified
213 2904666416 Bradyrhizobium nanningense CCBAU 51757 Isolate Unclassified
214 2906643746 Bradyrhizobium genosp. SA-3 Rp7b Isolate Unclassified
215 2922361189 Bradyrhizobium australiense WSM 1791 Isolate Nodule
216 2922386360 Bradyrhizobium archetypum WSM 1744 Isolate Nodule
217 2929615660 Bradyrhizobium japonicum TXVA Isolate Nodule
218 2929624759 Bradyrhizobium japonicum TXEA Isolate Nodule
219 2933577622 Bradyrhizobium japonicum SEMIA 417 Isolate Nodule
220 2935959822 Bradyrhizobium sp. F1.4.3 Isolate Nodule
221 8006984368 Bradyrhizobium sp. SRL28 Isolate Unclassified
222 8019576017 Bradyrhizobium sp. i1.7.7 Isolate Nodule
223 8019597564 Bradyrhizobium sp. i1.3.6 Isolate Nodule
224 8019608314 Bradyrhizobium sp. i1.3.1 Isolate Nodule
225 8055742211 Bradyrhizobium japonicum 5038 Isolate Nodule
226 8056673599 Bradyrhizobium hereditatis WSM 1738 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 86.42
Metatranscriptomes 0
Isolates 13.58

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.17
Nodule 9.9
Rhizoplane 5.61
Rhizosphere 59.41
Stem 0
Stem Tuber 0
Unclassified 1.65

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0439459_0012834 3300042438 Bacteria 1498
2 JGI25153J46596_10000736 3300003215 Bacteria 20062
3 JGI25153J46596_10000985 3300003215 Bacteria 17294
4 JGI25153J46596_10004178 3300003215 Bacteria 7834
5 rootL2_10082711 3300003322 Bacteria 1825
6 rootL2_10215135 3300003322 Bacteria 2024
7 Ga0055531_10006158 3300003794 Bacteria 6862
8 Ga0065165_1004302 3300005262 Bacteria 8962
9 Ga0068869_100254247 3300005334 Bacteria 1404
10 Ga0068868_100023285 3300005338 Bacteria 4686
11 Ga0070661_100124652 3300005344 Bacteria 1932
12 Ga0070668_100018359 3300005347 Bacteria 5251
13 Ga0070668_100076891 3300005347 Bacteria 2608
14 Ga0070669_100372118 3300005353 Bacteria 1164
15 Ga0070669_100603331 3300005353 Bacteria 920
16 Ga0070673_100321633 3300005364 Bacteria 1367
17 Ga0070659_100203934 3300005366 Bacteria 1628
18 Ga0070700_100020516 3300005441 Bacteria 3828
19 Ga0070694_100507716 3300005444 Bacteria 960
20 Ga0070663_100178663 3300005455 Bacteria 1645
21 Ga0070663_100267714 3300005455 Bacteria 1357
22 Ga0070663_100279853 3300005455 Bacteria 1329
23 Ga0070678_100012507 3300005456 Bacteria 5280
24 Ga0068867_100217230 3300005459 Bacteria 1538
25 Ga0070699_100199319 3300005518 Bacteria 1780
26 Ga0070684_100606691 3300005535 Bacteria 1018
27 Ga0070672_100165298 3300005543 Bacteria 1838
28 Ga0070695_100190283 3300005545 Bacteria 1460
29 Ga0070693_100134881 3300005547 Bacteria 1547
30 Ga0070665_100001701 3300005548 Bacteria 25284
31 Ga0070665_100005911 3300005548 Bacteria 12536
32 Ga0068855_100040891 3300005563 Bacteria 5498
33 Ga0068856_100037003 3300005614 Bacteria 4787
34 Ga0070702_100009142 3300005615 Bacteria 4836
35 Ga0068864_100115308 3300005618 Bacteria 2396
36 Ga0068861_100113335 3300005719 Bacteria 2175
37 Ga0068863_100175064 3300005841 Bacteria 2059
38 Ga0068863_100519870 3300005841 Bacteria 1173
39 Ga0068858_100196940 3300005842 Bacteria 1904
40 Ga0068858_100834855 3300005842 Bacteria 900
41 Ga0068860_100064979 3300005843 Bacteria 3465
42 Ga0068860_100184090 3300005843 Bacteria 2019
43 Ga0068860_100295243 3300005843 Bacteria 1586
44 Ga0081455_10007139 3300005937 Bacteria 11822
45 Ga0081455_10062521 3300005937 Bacteria 3129
46 Ga0081455_10127041 3300005937 Bacteria 1999
47 Ga0081540_1000565 3300005983 Bacteria 35910
48 Ga0081540_1001009 3300005983 Bacteria 25255
49 Ga0081540_1007583 3300005983 Bacteria 7708
50 Ga0081540_1033987 3300005983 Bacteria 2758
51 Ga0081540_1084467 3300005983 Bacteria 1417
52 Ga0081539_10112438 3300005985 Bacteria 1368
53 Ga0075365_10062196 3300006038 Bacteria 2496
54 Ga0075363_100001550 3300006048 Bacteria 8815
55 Ga0075364_10012257 3300006051 Bacteria 5242
56 Ga0075364_10038000 3300006051 Bacteria 3119
57 Ga0075362_10040407 3300006177 Bacteria 2054
58 Ga0075362_10122972 3300006177 Bacteria 1229
59 Ga0075367_10112448 3300006178 Bacteria 1673
60 Ga0075367_10144735 3300006178 Bacteria 1473
61 Ga0075369_10006089 3300006186 Bacteria 4547
62 Ga0075369_10045704 3300006186 Bacteria 1884
63 Ga0075366_10004369 3300006195 Bacteria 7581
64 Ga0097621_100160182 3300006237 Bacteria 1934
65 Ga0075370_10037484 3300006353 Bacteria 2727
66 Ga0075370_10074515 3300006353 Bacteria 1945
67 Ga0075370_10097210 3300006353 Bacteria 1702
68 Ga0075370_10121378 3300006353 Bacteria 1521
69 Ga0068871_100018287 3300006358 Bacteria 5324
70 Ga0075430_100103682 3300006846 Bacteria 2374
71 Ga0075431_100037732 3300006847 Bacteria 4975
72 Ga0075431_100103688 3300006847 Bacteria 2935
73 Ga0075431_100210318 3300006847 Bacteria 1987
74 Ga0075433_10013648 3300006852 Bacteria 6614
75 Ga0075434_100041041 3300006871 Bacteria 4583
76 Ga0075429_100016189 3300006880 Bacteria 6460
77 Ga0099823_1070779 3300006944 Bacteria 1554
78 Ga0075435_100343475 3300007076 Bacteria 1279
79 Ga0105250_10049864 3300009092 Bacteria 1679
80 Ga0111539_10139029 3300009094 Bacteria 2844
81 Ga0111539_10360831 3300009094 Bacteria 1691
82 Ga0105245_10088611 3300009098 Bacteria 2843
83 Ga0105245_10387862 3300009098 Bacteria 1393
84 Ga0105247_10116260 3300009101 Bacteria 1727
85 Ga0114129_10046814 3300009147 Bacteria 6077
86 Ga0114129_10139029 3300009147 Bacteria 3330
87 Ga0105241_10017124 3300009174 Bacteria 5322
88 Ga0105241_10095443 3300009174 Bacteria 2354
89 Ga0105248_10326666 3300009177 Bacteria 1728
90 Ga0105237_10075648 3300009545 Bacteria 3358
91 Ga0105239_10550172 3300010375 Bacteria 1314
92 Ga0105246_10015245 3300011119 Bacteria 4849
93 Ga0105246_10554261 3300011119 Bacteria 986
94 Ga0157374_10448481 3300013296 Bacteria 1291
95 Ga0157378_10003347 3300013297 Bacteria 14261
96 Ga0157378_10073631 3300013297 Bacteria 3071
97 Ga0163162_10323350 3300013306 Bacteria 1675
98 Ga0163162_10324550 3300013306 Bacteria 1672
99 Ga0157375_10112031 3300013308 Bacteria 2828
100 Ga0157375_10789552 3300013308 Bacteria 1099
101 Ga0157380_10064800 3300014326 Bacteria 2934
102 Ga0157380_10549190 3300014326 Bacteria 1133
103 Ga0157379_10567019 3300014968 Bacteria 1057
104 Ga0157376_10171606 3300014969 Bacteria 1975
105 Ga0157376_10553767 3300014969 Bacteria 1138
106 Ga0163161_10115197 3300017792 Bacteria 2014
107 Ga0209564_1001156 3300025295 Bacteria 30779
108 Ga0209564_1011460 3300025295 Bacteria 3970
109 Ga0209758_1000100 3300025297 Bacteria 227948
110 Ga0209758_1004795 3300025297 Bacteria 10934
111 Ga0209758_1018786 3300025297 Bacteria 3369
112 Ga0209256_1002637 3300025299 Bacteria 14124
113 Ga0207426_1000575 3300025302 Bacteria 49342
114 Ga0207426_1011857 3300025302 Bacteria 3298
115 Ga0209257_1002068 3300025304 Bacteria 21183
116 Ga0207642_10081554 3300025899 Bacteria 1572
117 Ga0207688_10058477 3300025901 Bacteria 2169
118 Ga0207688_10140343 3300025901 Bacteria 1422
119 Ga0207643_10387732 3300025908 Bacteria 882
120 Ga0207684_10302859 3300025910 Bacteria 1378
121 Ga0207671_10117534 3300025914 Bacteria 2030
122 Ga0207662_10189441 3300025918 Bacteria 1327
123 Ga0207706_10019492 3300025933 Bacteria 6103
124 Ga0207709_10041455 3300025935 Bacteria 2762
125 Ga0207669_10269022 3300025937 Bacteria 1279
126 Ga0207704_10222406 3300025938 Bacteria 1398
127 Ga0207711_10069165 3300025941 Bacteria 3060
128 Ga0207689_10276178 3300025942 Bacteria 1391
129 Ga0207679_10143019 3300025945 Bacteria 1936
130 Ga0207668_10047855 3300025972 Bacteria 2930
131 Ga0207668_10104539 3300025972 Bacteria 2111
132 Ga0207658_10420535 3300025986 Bacteria 1178
133 Ga0207678_10047972 3300026067 Bacteria 3692
134 Ga0207678_10100502 3300026067 Bacteria 2471
135 Ga0207708_10151047 3300026075 Bacteria 1828
136 Ga0207641_10273833 3300026088 Bacteria 1585
137 Ga0207648_10129391 3300026089 Bacteria 2222
138 Ga0207674_10299454 3300026116 Bacteria 1557
139 Ga0207675_100053263 3300026118 Bacteria 3776
140 Ga0207675_100068896 3300026118 Bacteria 3306
141 Ga0207675_100218629 3300026118 Bacteria 1835
142 Ga0207698_10378018 3300026142 Bacteria 1347
143 Ga0209389_1000094 3300027296 Bacteria 80555
144 Ga0209489_110925 3300027361 Bacteria 9734
145 Ga0209700_100374 3300027363 Bacteria 81273
146 Ga0268266_10002227 3300028379 Bacteria 21177
147 Ga0268265_10110052 3300028380 Bacteria 2247
148 Ga0268264_10342117 3300028381 Bacteria 1421
149 Ga0307517_10179082 3300028786 Bacteria 1373
150 Ga0307513_10152564 3300031456 Bacteria 2216
151 Ga0307508_10308487 3300031616 Bacteria 1175
152 Ga0307516_10138176 3300031730 Bacteria 2209
153 Ga0307516_10220267 3300031730 Bacteria 1607
154 Ga0307413_10267449 3300031824 Bacteria 1278
155 Ga0307413_10429608 3300031824 Bacteria 1043
156 Ga0373943_0142874 3300035170 Bacteria 1291
157 Ga0373927_0067493 3300035695 Bacteria 2314
158 Ga0373947_0114624 3300035725 Bacteria 1707
159 Ga0395905_0003686 3300037471 Bacteria 16219
160 Ga0395901_0103703 3300038443 Bacteria 2984
161 Ga0436363_0583111 3300039450 Unclassified 4620
162 Ga0451789_0102280 3300041443 Bacteria 1300
163 Ga0466972_0000206 3300044658 Bacteria 42982
164 Ga0466960_0009173 3300044901 Bacteria 4071
165 Ga0495603_0010909 3300046455 Bacteria 5512
166 Ga0495603_0023210 3300046455 Bacteria 3756
167 Ga0495603_0049469 3300046455 Bacteria 2502
168 Ga0495603_0222597 3300046455 Bacteria 1089
169 Ga0495590_0043212 3300046457 Bacteria 1572
170 Ga0495580_0443940 3300046472 Bacteria 871
171 Ga0495582_0092062 3300046473 Bacteria 1691
172 Ga0495639_0027745 3300046475 Bacteria 2507
173 Ga0495585_0077441 3300046492 Bacteria 1805
174 Ga0495585_0104753 3300046492 Bacteria 1509
175 Ga0495607_0041825 3300046501 Bacteria 2720
176 Ga0495583_0129276 3300046506 Bacteria 1058
177 Ga0495663_0061607 3300046525 Bacteria 1180
178 Ga0495666_0147263 3300046526 Bacteria 1096
179 Ga0495642_0166448 3300046528 Bacteria 957
180 Ga0495621_0036475 3300046539 Bacteria 1706
181 Ga0495633_0028152 3300046558 Bacteria 2741
182 Ga0495633_0050945 3300046558 Bacteria 1951
183 Ga0495656_0042383 3300046615 Bacteria 1905
184 Ga0495656_0116194 3300046615 Bacteria 1257
185 Ga0495668_0056274 3300046616 Bacteria 2171
186 Ga0495668_0100955 3300046616 Bacteria 1578
187 Ga0495611_0026048 3300046648 Bacteria 2551
188 Ga0495611_0098725 3300046648 Bacteria 1354
189 Ga0495625_0206236 3300046660 Bacteria 1294
190 Ga0495625_0302397 3300046660 Bacteria 1023
191 Ga0495659_0015951 3300046664 Bacteria 2474
192 Ga0495647_0057224 3300046681 Bacteria 1530
193 Ga0495658_0117338 3300046683 Bacteria 1606
194 Ga0495669_0037553 3300046684 Bacteria 2144
195 Ga0495613_0373008 3300046689 Bacteria 977
196 Ga0495670_0077269 3300046691 Bacteria 1692
197 Ga0495589_0186440 3300046794 Bacteria 983
198 Ga0495636_0026722 3300047318 Bacteria 2349
199 Ga0495636_0084992 3300047318 Bacteria 1367
200 Ga0495672_0005547 3300047320 Bacteria 9981
201 Ga0495676_0065868 3300047321 Bacteria 2810
202 Ga0495615_0102718 3300048090 Bacteria 809
203 Ga0496100_0146267 3300048903 Bacteria 1681
204 Ga0496102_0293630 3300048905 Bacteria 1532
205 Ga0496102_0347568 3300048905 Bacteria 1396
206 Ga0496102_0464896 3300048905 Bacteria 1186
207 Ga0496106_0157892 3300048909 Bacteria 1792
208 Ga0496107_0195149 3300048910 Bacteria 1505
209 Ga0496108_0072438 3300048911 Bacteria 2908
210 Ga0496108_0411708 3300048911 Bacteria 1181
211 Ga0496109_0097832 3300048912 Bacteria 2720
212 Ga0496109_0345535 3300048912 Bacteria 1405
213 Ga0496110_0172965 3300048913 Bacteria 1960
214 Ga0496110_0322947 3300048913 Bacteria 1406
215 Ga0496111_0184495 3300048914 Bacteria 1551
216 Ga0496112_0072050 3300048915 Bacteria 3415
217 Ga0496115_0155714 3300048918 Bacteria 1888
218 Ga0496119_0039898 3300048922 Bacteria 3012
219 Ga0496121_0156191 3300048924 Bacteria 1674
220 Ga0496124_0114119 3300048927 Bacteria 2170
221 Ga0496126_0003238 3300048929 Bacteria 20812
222 Ga0501036_0454685 3300049572 Bacteria 1067
223 Ga0501069_0037136 3300049585 Bacteria 2688
224 Ga0501069_0139251 3300049585 Bacteria 1392
225 Ga0501070_0025539 3300049586 Bacteria 4955
226 Ga0501080_0449597 3300049742 Bacteria 1155
227 nmdc:mga03683_53120_c1 3300050489 Bacteria 1695
228 nmdc:mga0yw44_190358_c1 3300050492 Bacteria 1353
229 nmdc:mga0yw44_22106_c1 3300050492 Bacteria 3560
230 nmdc:mga0yw44_2230_c1 3300050492 Bacteria 8169
231 nmdc:mga0k408_49456_c1 3300050493 Bacteria 2433
232 nmdc:mga06z11_139571_c1 3300050494 Unclassified 1369
233 nmdc:mga06z11_40029_c1 3300050494 Bacteria 2336
234 nmdc:mga04h51_62660_c1 3300050495 Bacteria 1278
235 nmdc:mga07m45_124559_c1 3300050496 Bacteria 1490
236 nmdc:mga07m45_182531_c1 3300050496 Bacteria 1220
237 nmdc:mga07m45_286950_c1 3300050496 Bacteria 957
238 nmdc:mga07m45_391486_c1 3300050496 Bacteria 807
239 nmdc:mga05p37_208532_c1 3300050507 Bacteria 2363
240 nmdc:mga05p37_310893_c1 3300050507 Bacteria 1868
241 nmdc:mga09592_405267_c1 3300050508 Bacteria 1178
242 nmdc:mga09592_651048_c1 3300050508 Bacteria 899
243 nmdc:mga0qj67_186367_c1 3300050509 Unclassified 1686
244 nmdc:mga0qj67_93605_c1 3300050509 Bacteria 2416
245 nmdc:mga06r32_182207_c1 3300050510 Bacteria 2086
246 nmdc:mga06r32_218751_c1 3300050510 Unclassified 1893
247 nmdc:mga08y16_508497_c1 3300050511 Unclassified 1223
248 nmdc:mga08y16_52192_c1 3300050511 Bacteria 4278
249 nmdc:mga0rr50_189749_c1 3300050513 Bacteria 1683
250 nmdc:mga0rr50_334739_c1 3300050513 Bacteria 1271
251 nmdc:mga0a205_18276_c1 3300050515 Bacteria 6588
252 nmdc:mga0sz30_152982_c1 3300050516 Bacteria 1021
253 nmdc:mga0sz30_91083_c1 3300050516 Bacteria 1327
254 Ga0495655_0083406 3300053083 Bacteria 918
255 Ga0500578_0067973 3300053086 Bacteria 2272
256 Ga0500646_0057502 3300053090 Bacteria 1137
257 Ga0500641_0050707 3300053096 Bacteria 1706
258 Ga0500561_0125538 3300053137 Bacteria 786
259 Ga0500577_0027680 3300053142 Bacteria 1944
260 Ga0500634_0137966 3300053161 Bacteria 1159
261 Ga0501082_0191552 3300060353 Bacteria 1779
262 2513626620 2513237092 Bacteria 8341956
263 2513875319 2513237139 Bacteria 8737671
264 2514016112 2513237161 Bacteria 8871253
265 2517103670 2517093001 Bacteria 9002274
266 2671117987 2667528175 Bacteria 7532676
267 2728750597 2728368998 Bacteria 8720350
268 2745082104 2744054633 Bacteria 8678936
269 2793079685
270 2805921947 2802429603 Bacteria 8777136
271 2824679139 2824671348 Bacteria 8369588
272 2824695059 2824687955 Bacteria 8360029
273 2838128744 2838122688 Bacteria 8803140
274 2841967203 2841966195 Bacteria 8673214
275 2841979397 2841974524 Bacteria 8931498
276 2841989875 2841983080 Bacteria 8395090
277 2842053529 2842045827 Bacteria 8006841
278 2847935028 2847930680 Bacteria 9342022
279 2847945584 2847939898 Bacteria 8606328
280 2849080256 2849076700 Bacteria 7039503
281 2857510380 2857509624 Bacteria 7472071
282 2874613254 2874612657 Bacteria 8252029
283 2874626922 2874620515 Bacteria 8290088
284 2876761265 2876761206 Bacteria 10111113
285 2876811553 2876808645 Bacteria 8824342
286 2879086421 2879083081 Bacteria 8587928
287 2879110426 2879110137 Bacteria 8907982
288 2885416710 2885409591 Bacteria 9235467
289 2889040849 2889033259 Bacteria 9099371
290 2904669623 2904666416 Bacteria 8226587
291 2906652249 2906643746 Bacteria 8722424
292 2922367941 2922361189 Bacteria 7436256
293 2922392170 2922386360 Bacteria 7017218
294 2929615770 2929615660 Bacteria 9193770
295 2929630383 2929624759 Bacteria 9339455
296 2933578944 2933577622 Bacteria 9116884
297 2935963862 2935959822 Bacteria 7869783
298 8006990488 8006984368 Bacteria 9651211
299 8019585706 8019576017 Bacteria 10049540
300 8019597779 8019597564 Bacteria 10041141
301 8019610606 8019608314 Bacteria 10042931
302 8055747417 8055742211 Bacteria 9226248
303 8056680615 8056673599 Bacteria 7871253
304 Ga0439459_0012834
305 JGI25153J46596_10000736
306 JGI25153J46596_10000985
307 JGI25153J46596_10004178
308 rootL2_10082711
309 rootL2_10215135
310 Ga0055531_10006158
311 Ga0065165_1004302
312 Ga0068869_100254247
313 Ga0068868_100023285
314 Ga0070661_100124652
315 Ga0070668_100018359
316 Ga0070668_100076891
317 Ga0070669_100372118
318 Ga0070669_100603331
319 Ga0070673_100321633
320 Ga0070659_100203934
321 Ga0070700_100020516
322 Ga0070694_100507716
323 Ga0070663_100178663
324 Ga0070663_100267714
325 Ga0070663_100279853
326 Ga0070678_100012507
327 Ga0068867_100217230
328 Ga0070699_100199319
329 Ga0070684_100606691
330 Ga0070672_100165298
331 Ga0070695_100190283
332 Ga0070693_100134881
333 Ga0070665_100001701
334 Ga0070665_100005911
335 Ga0068855_100040891
336 Ga0068856_100037003
337 Ga0070702_100009142
338 Ga0068864_100115308
339 Ga0068861_100113335
340 Ga0068863_100175064
341 Ga0068863_100519870
342 Ga0068858_100196940
343 Ga0068858_100834855
344 Ga0068860_100064979
345 Ga0068860_100184090
346 Ga0068860_100295243
347 Ga0081455_10007139
348 Ga0081455_10062521
349 Ga0081455_10127041
350 Ga0081540_1000565
351 Ga0081540_1001009
352 Ga0081540_1007583
353 Ga0081540_1033987
354 Ga0081540_1084467
355 Ga0081539_10112438
356 Ga0075365_10062196
357 Ga0075363_100001550
358 Ga0075364_10012257
359 Ga0075364_10038000
360 Ga0075362_10040407
361 Ga0075362_10122972
362 Ga0075367_10112448
363 Ga0075367_10144735
364 Ga0075369_10006089
365 Ga0075369_10045704
366 Ga0075366_10004369
367 Ga0097621_100160182
368 Ga0075370_10037484
369 Ga0075370_10074515
370 Ga0075370_10097210
371 Ga0075370_10121378
372 Ga0068871_100018287
373 Ga0075430_100103682
374 Ga0075431_100037732
375 Ga0075431_100103688
376 Ga0075431_100210318
377 Ga0075433_10013648
378 Ga0075434_100041041
379 Ga0075429_100016189
380 Ga0099823_1070779
381 Ga0075435_100343475
382 Ga0105250_10049864
383 Ga0111539_10139029
384 Ga0111539_10360831
385 Ga0105245_10088611
386 Ga0105245_10387862
387 Ga0105247_10116260
388 Ga0114129_10046814
389 Ga0114129_10139029
390 Ga0105241_10017124
391 Ga0105241_10095443
392 Ga0105248_10326666
393 Ga0105237_10075648
394 Ga0105239_10550172
395 Ga0105246_10015245
396 Ga0105246_10554261
397 Ga0157374_10448481
398 Ga0157378_10003347
399 Ga0157378_10073631
400 Ga0163162_10323350
401 Ga0163162_10324550
402 Ga0157375_10112031
403 Ga0157375_10789552
404 Ga0157380_10064800
405 Ga0157380_10549190
406 Ga0157379_10567019
407 Ga0157376_10171606
408 Ga0157376_10553767
409 Ga0163161_10115197
410 Ga0209564_1001156
411 Ga0209564_1011460
412 Ga0209758_1000100
413 Ga0209758_1004795
414 Ga0209758_1018786
415 Ga0209256_1002637
416 Ga0207426_1000575
417 Ga0207426_1011857
418 Ga0209257_1002068
419 Ga0207642_10081554
420 Ga0207688_10058477
421 Ga0207688_10140343
422 Ga0207643_10387732
423 Ga0207684_10302859
424 Ga0207671_10117534
425 Ga0207662_10189441
426 Ga0207706_10019492
427 Ga0207709_10041455
428 Ga0207669_10269022
429 Ga0207704_10222406
430 Ga0207711_10069165
431 Ga0207689_10276178
432 Ga0207679_10143019
433 Ga0207668_10047855
434 Ga0207668_10104539
435 Ga0207658_10420535
436 Ga0207678_10047972
437 Ga0207678_10100502
438 Ga0207708_10151047
439 Ga0207641_10273833
440 Ga0207648_10129391
441 Ga0207674_10299454
442 Ga0207675_100053263
443 Ga0207675_100068896
444 Ga0207675_100218629
445 Ga0207698_10378018
446 Ga0209389_1000094
447 Ga0209489_110925
448 Ga0209700_100374
449 Ga0268266_10002227
450 Ga0268265_10110052
451 Ga0268264_10342117
452 Ga0307517_10179082
453 Ga0307513_10152564
454 Ga0307508_10308487
455 Ga0307516_10138176
456 Ga0307516_10220267
457 Ga0307413_10267449
458 Ga0307413_10429608
459 Ga0373943_0142874
460 Ga0373927_0067493
461 Ga0373947_0114624
462 Ga0395905_0003686
463 Ga0395901_0103703
464 Ga0436363_0583111
465 Ga0451789_0102280
466 Ga0466972_0000206
467 Ga0466960_0009173
468 Ga0495603_0010909
469 Ga0495603_0023210
470 Ga0495603_0049469
471 Ga0495603_0222597
472 Ga0495590_0043212
473 Ga0495580_0443940
474 Ga0495582_0092062
475 Ga0495639_0027745
476 Ga0495585_0077441
477 Ga0495585_0104753
478 Ga0495607_0041825
479 Ga0495583_0129276
480 Ga0495663_0061607
481 Ga0495666_0147263
482 Ga0495642_0166448
483 Ga0495621_0036475
484 Ga0495633_0028152
485 Ga0495633_0050945
486 Ga0495656_0042383
487 Ga0495656_0116194
488 Ga0495668_0056274
489 Ga0495668_0100955
490 Ga0495611_0026048
491 Ga0495611_0098725
492 Ga0495625_0206236
493 Ga0495625_0302397
494 Ga0495659_0015951
495 Ga0495647_0057224
496 Ga0495658_0117338
497 Ga0495669_0037553
498 Ga0495613_0373008
499 Ga0495670_0077269
500 Ga0495589_0186440
501 Ga0495636_0026722
502 Ga0495636_0084992
503 Ga0495672_0005547
504 Ga0495676_0065868
505 Ga0495615_0102718
506 Ga0496100_0146267
507 Ga0496102_0293630
508 Ga0496102_0347568
509 Ga0496102_0464896
510 Ga0496106_0157892
511 Ga0496107_0195149
512 Ga0496108_0072438
513 Ga0496108_0411708
514 Ga0496109_0097832
515 Ga0496109_0345535
516 Ga0496110_0172965
517 Ga0496110_0322947
518 Ga0496111_0184495
519 Ga0496112_0072050
520 Ga0496115_0155714
521 Ga0496119_0039898
522 Ga0496121_0156191
523 Ga0496124_0114119
524 Ga0496126_0003238
525 Ga0501036_0454685
526 Ga0501069_0037136
527 Ga0501069_0139251
528 Ga0501070_0025539
529 Ga0501080_0449597
530 nmdc:mga03683_53120_c1
531 nmdc:mga0yw44_190358_c1
532 nmdc:mga0yw44_22106_c1
533 nmdc:mga0yw44_2230_c1
534 nmdc:mga0k408_49456_c1
535 nmdc:mga06z11_139571_c1
536 nmdc:mga06z11_40029_c1
537 nmdc:mga04h51_62660_c1
538 nmdc:mga07m45_124559_c1
539 nmdc:mga07m45_182531_c1
540 nmdc:mga07m45_286950_c1
541 nmdc:mga07m45_391486_c1
542 nmdc:mga05p37_208532_c1
543 nmdc:mga05p37_310893_c1
544 nmdc:mga09592_405267_c1
545 nmdc:mga09592_651048_c1
546 nmdc:mga0qj67_186367_c1
547 nmdc:mga0qj67_93605_c1
548 nmdc:mga06r32_182207_c1
549 nmdc:mga06r32_218751_c1
550 nmdc:mga08y16_508497_c1
551 nmdc:mga08y16_52192_c1
552 nmdc:mga0rr50_189749_c1
553 nmdc:mga0rr50_334739_c1
554 nmdc:mga0a205_18276_c1
555 nmdc:mga0sz30_152982_c1
556 nmdc:mga0sz30_91083_c1
557 Ga0495655_0083406
558 Ga0500578_0067973
559 Ga0500646_0057502
560 Ga0500641_0050707
561 Ga0500561_0125538
562 Ga0500577_0027680
563 Ga0500634_0137966
564 Ga0501082_0191552
565 2513626620
566 2513875319
567 2514016112
568 2517103670
569 2671117987
570 2728750597
571 2745082104
572 2793079685
573 2805921947
574 2824679139
575 2824695059
576 2838128744
577 2841967203
578 2841979397
579 2841989875
580 2842053529
581 2847935028
582 2847945584
583 2849080256
584 2857510380
585 2874613254
586 2874626922
587 2876761265
588 2876811553
589 2879086421
590 2879110426
591 2885416710
592 2889040849
593 2904669623
594 2906652249
595 2922367941
596 2922392170
597 2929615770
598 2929630383
599 2933578944
600 2935963862
601 8006990488
602 8019585706
603 8019597779
604 8019610606
605 8055747417
606 8056680615

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01522

Polysacc_deac_1

Polysaccharide deacetylase

94

224

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
2c1g-assembly1.cif.gz_A structure of streptococcus pneumoniae peptidoglycan deacetylase (sppgda) 0.9231 56 242
2c1i-assembly1.cif.gz_A structure of streptococcus pneumoniae peptidoglycan deacetylase (sppgda) d 275 n mutant. 0.9075 56 242
6h8l-assembly1.cif.gz_A structure of peptidoglycan deacetylase pdac from bacillus subtilis 0.9045 56 242
5jp6-assembly1.cif.gz_A bdellovibrio bacteriovorus peptidoglycan deacetylase bd3279 0.9044 17 250
6h8n-assembly1.cif.gz_A structure of peptidoglycan deacetylase pdac from bacillus subtilis - mutant d285s 0.9025 56 242
ID Description Score Start End Superfamily
2c1iA03 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase/deacetylase 0.9148 59 242 3.20.20.370
5lgcA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase/deacetylase 0.8958 56 242 3.20.20.370
2y8uA00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase/deacetylase 0.8903 57 245 3.20.20.370
af_O53444_35_232_3.20.20.370 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase/deacetylase 0.887 56 242 3.20.20.370
4l1gD00 Alpha Beta;Alpha-Beta Barrel;TIM Barrel;Glycoside hydrolase/deacetylase 0.8831 37 242 3.20.20.370
ID Description Score Start End GO Terms
AF-A0A327KUM1-F1-model_v4 Chitooligosaccharide deacetylase (Nodulation protein B) 0.9628 22 257 GO:0005975
GO:0016020
GO:0016810
AF-A0A2D7FCN5-F1-model_v4 Chitooligosaccharide deacetylase (Nodulation protein B) 0.96 24 250 GO:0005975
GO:0016020
GO:0016810
AF-A0A2P5KXD8-F1-model_v4 Chitooligosaccharide deacetylase (Nodulation protein B) 0.9595 21 247 GO:0005975
GO:0016020
GO:0016810
AF-A0A109BGJ5-F1-model_v4 Chitooligosaccharide deacetylase (Nodulation protein B) 0.9577 24 249 GO:0005975
GO:0016020
GO:0016810
AF-A0A2D8XJ63-F1-model_v4 Chitooligosaccharide deacetylase (Nodulation protein B) 0.9557 42 250 GO:0005975
GO:0016020
GO:0016810

Map