F396884

General Info

Members Datasets Scaffolds Average Seq Length
303 159 288 486

Family's Representative Sequence

Representative Sequence 3300005458|Ga0070681_10006056|Ga0070681_100060565
Length 537
Sequence MDVIIPDKAHDESRQGEALVLETTGSKTDSRKLYIESYGCAMNFSDSEIVASILSERGFQTTQDFNQADVIFINTCSIRENAEQRVRNRLKEFTIAKVKNPGLVVGVLGCMAERLKSKFLEEEKLVDVVVGPDAYRDLPNLIEQADGGQRAVNVLLSREETYADINPVRLNSNGINAFVSIMRGCDNMCSFCVVPFTRGRERSRDPQSIVGECTDLFNRGYREITLLGQNVDSYKWTQAAPSKSPPTGETSKGDGDELETTISNLQIKVSALVGAGNPVTIGLKAAEGDPLNARVQKVSPSGGDLEGAFVNFANLLEMVARISPDLRVRFSTSHPKDITDEVLYTIKKYDNICKYIHLPVQSGNSRVLELMNRTYDREWYIGRIDAIRRIIPECAISTDVITGFCSETEEEHHDTLSMMDYVHYDFAYMFMYSERPGTLAAKRYADDIPDEVKRRRLKEVVAKQQQHSHLRLQDKVGTTQKVLIEGFSKKSDGDYCGRSDQNAMVVFPVGENYKPGQYVNVLIERCTTATLIGRVIS

Samples

Sample ID Description Type Environment
1 2599185184 Mucilaginibacter sp. NFR10 Isolate Rhizoplane
2 2739367866 Hymenobacter sp. YR204 Isolate Unclassified
3 2839989709 Pontibacter arcticus 2b14 Isolate Unclassified
4 2852623160 Mucilaginibacter sp. AK015 Isolate Rhizosphere
5 2884634485 Algoriphagus kandeliae XY-J91 Isolate Unclassified
6 2884933994 Mucilaginibacter sp. 14171R-50 Isolate Rhizosphere
7 2890737413 Parapedobacter sp. SGR-10 Isolate Rhizosphere
8 2898713307 Sphingobacterium sp. SGG-5 Isolate Rhizosphere
9 2902048731 Pedobacter ureilyticus THG-T11 Isolate Rhizosphere
10 2919437846 Mucilaginibacter pocheonensis 3262 Isolate Rhizosphere
11 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
12 2928078545 Mucilaginibacter rubeus 1215 Isolate Unclassified
13 2928147474 Mucilaginibacter rubeus 2025 Isolate Unclassified
14 2932082852 Mucilaginibacter sp. 3215 Isolate Rhizosphere
15 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified
16 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
17 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
18 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
19 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
20 3300002772 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS Metagenome Endosphere
21 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
22 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
23 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
24 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
25 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
26 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
27 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
28 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
29 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
30 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
31 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
32 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
33 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
34 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
35 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
36 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
37 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
38 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
39 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
40 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
41 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
42 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
43 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
44 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
45 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
46 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
47 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
48 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
49 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
50 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
51 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
53 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
54 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
61 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
62 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
65 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
66 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
67 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
68 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
69 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
70 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
71 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
72 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
73 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
74 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
75 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
76 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
77 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
78 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
79 3300025258 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMS (SPAdes) (version 3) Metagenome Endosphere
80 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
81 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
108 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
109 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
110 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
111 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
112 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
113 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
114 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
115 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
116 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
117 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
118 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
119 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
120 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
121 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
122 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
123 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
124 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
125 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
126 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
127 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
128 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
129 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
130 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
131 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
132 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
133 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
134 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
135 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
136 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
137 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
138 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
139 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
140 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
141 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
142 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
143 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
144 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
145 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
146 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
147 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
148 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
149 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
151 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
152 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
153 3300049765 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_B_4_drought Metagenome Rhizosphere
154 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
155 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
156 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
157 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
158 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
159 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.72
Metatranscriptomes 0.33
Isolates 4.95

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.94
Nodule 0
Rhizoplane 0.33
Rhizosphere 84.49
Stem 0
Stem Tuber 0
Unclassified 9.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24737J22298_10001070 3300001990 Bacteria 9674
2 JGI24735J21928_10000015 3300002067 Bacteria 167231
3 JGI24744J21845_10001162 3300002077 Bacteria 5124
4 JGI25162J39368_1000016 3300002737 Bacteria 288734
5 JGI25162J39368_1000928 3300002737 Bacteria 18824
6 JGI25164J39214_1000859 3300002772 Bacteria 10423
7 JGI25406J46586_10025460 3300003203 Bacteria 2297
8 rootH1_10022763 3300003316 Bacteria 25979
9 rootH1_10145579 3300003316 Bacteria 10771
10 rootH2_10017734 3300003320 Bacteria 6730
11 rootH2_10017735 3300003320 Bacteria 23373
12 rootH2_10044089 3300003320 Bacteria 6840
13 rootH1_10017449 3300003323 Bacteria 6495
14 rootH1_10021718 3300003323 Bacteria 24181
15 rootH1_10079778 3300003323 Bacteria 3479
16 Ga0070658_10000008 3300005327 Bacteria 319912
17 Ga0070658_10013748 3300005327 Bacteria 6496
18 Ga0070658_10031463 3300005327 Bacteria 4261
19 Ga0070658_10090295 3300005327 Bacteria 2524
20 Ga0070658_10107344 3300005327 Bacteria 2310
21 Ga0070676_10000065 3300005328 Bacteria 35089
22 Ga0070683_100012118 3300005329 Bacteria 7483
23 Ga0070683_100014564 3300005329 Bacteria 6885
24 Ga0070670_100127642 3300005331 Bacteria 2195
25 Ga0070680_100203365 3300005336 Unclassified 1670
26 Ga0070682_100016359 3300005337 Bacteria 4312
27 Ga0068868_100007786 3300005338 Bacteria 7647
28 Ga0070660_100005808 3300005339 Bacteria 8546
29 Ga0070660_100006772 3300005339 Bacteria 7954
30 Ga0070660_100020009 3300005339 Bacteria 4912
31 Ga0070660_100051089 3300005339 Unclassified 3183
32 Ga0070673_100012325 3300005364 Bacteria 5868
33 Ga0070659_100000107 3300005366 Bacteria 61453
34 Ga0070667_100230384 3300005367 Bacteria 1652
35 Ga0070663_100116864 3300005455 Bacteria 2011
36 Ga0070678_100002126 3300005456 Bacteria 10737
37 Ga0070662_100000472 3300005457 Bacteria 23890
38 Ga0070681_10006056 3300005458 Bacteria 11728
39 Ga0070681_10061123 3300005458 Bacteria 3743
40 Ga0070681_10082588 3300005458 Bacteria 3168
41 Ga0068867_100000211 3300005459 Bacteria 38776
42 Ga0070679_100008525 3300005530 Bacteria 9657
43 Ga0070679_100077225 3300005530 Unclassified 3319
44 Ga0070679_100117971 3300005530 Bacteria 2638
45 Ga0070679_100133214 3300005530 Bacteria 2466
46 Ga0070684_100009146 3300005535 Bacteria 7790
47 Ga0068853_100006062 3300005539 Bacteria 9566
48 Ga0068853_100138741 3300005539 Bacteria 2181
49 Ga0070665_100000061 3300005548 Bacteria 222138
50 Ga0068855_100000130 3300005563 Bacteria 95659
51 Ga0068855_100000260 3300005563 Bacteria 65935
52 Ga0068855_100004384 3300005563 Bacteria 17247
53 Ga0068855_100004951 3300005563 Bacteria 16243
54 Ga0068855_100036234 3300005563 Bacteria 5873
55 Ga0068855_100060985 3300005563 Bacteria 4407
56 Ga0068855_100248923 3300005563 Bacteria 1983
57 Ga0068855_100314202 3300005563 Bacteria 1733
58 Ga0068856_100000668 3300005614 Bacteria 37241
59 Ga0068856_100009491 3300005614 Bacteria 9448
60 Ga0068856_100064185 3300005614 Bacteria 3628
61 Ga0068852_100002617 3300005616 Bacteria 12436
62 Ga0068852_100005428 3300005616 Bacteria 9114
63 Ga0068866_10011685 3300005718 Bacteria 3807
64 Ga0081539_10001436 3300005985 Bacteria 40812
65 Ga0075366_10002789 3300006195 Bacteria 9036
66 Ga0075366_10018414 3300006195 Bacteria 4031
67 Ga0097621_100000016 3300006237 Bacteria 91785
68 Ga0097621_100057466 3300006237 Bacteria 3182
69 Ga0068871_100000494 3300006358 Bacteria 26958
70 Ga0068865_100000063 3300006881 Bacteria 56994
71 Ga0105240_10000082 3300009093 Bacteria 195184
72 Ga0105240_10004807 3300009093 Bacteria 20358
73 Ga0105240_10028025 3300009093 Bacteria 7366
74 Ga0105240_10062551 3300009093 Bacteria 4633
75 Ga0105240_10066114 3300009093 Bacteria 4487
76 Ga0105240_10099707 3300009093 Bacteria 3535
77 Ga0105241_10000116 3300009174 Bacteria 57591
78 Ga0105241_10003646 3300009174 Bacteria 11434
79 Ga0105241_10007919 3300009174 Bacteria 7812
80 Ga0105241_10081091 3300009174 Bacteria 2541
81 Ga0105237_10001478 3300009545 Bacteria 30966
82 Ga0105237_10001495 3300009545 Bacteria 30789
83 Ga0105237_10001876 3300009545 Bacteria 26824
84 Ga0105237_10007469 3300009545 Bacteria 11956
85 Ga0105237_10010671 3300009545 Bacteria 9757
86 Ga0105237_10016737 3300009545 Bacteria 7613
87 Ga0105238_10016701 3300009551 Bacteria 7437
88 Ga0105238_10036712 3300009551 Bacteria 4982
89 Ga0105249_10083533 3300009553 Bacteria 2973
90 Ga0105239_10000017 3300010375 Bacteria 290760
91 Ga0105239_10000049 3300010375 Bacteria 177578
92 Ga0105239_10000740 3300010375 Bacteria 46443
93 Ga0105239_10003605 3300010375 Bacteria 18919
94 Ga0105239_10005220 3300010375 Bacteria 15288
95 Ga0105239_10010361 3300010375 Bacteria 10435
96 Ga0105239_10016717 3300010375 Bacteria 8109
97 Ga0105239_10085760 3300010375 Bacteria 3471
98 Ga0105239_10139938 3300010375 Bacteria 2697
99 Ga0157373_10000271 3300013100 Bacteria 41646
100 Ga0157373_10011822 3300013100 Bacteria 6413
101 Ga0157371_10002522 3300013102 Bacteria 17403
102 Ga0157371_10004640 3300013102 Bacteria 11903
103 Ga0157371_10005703 3300013102 Bacteria 10440
104 Ga0157371_10025038 3300013102 Bacteria 4355
105 Ga0157370_10001314 3300013104 Bacteria 30974
106 Ga0157370_10046039 3300013104 Bacteria 4183
107 Ga0157369_10002910 3300013105 Bacteria 20469
108 Ga0157369_10079102 3300013105 Bacteria 3522
109 Ga0157369_10151945 3300013105 Bacteria 2447
110 Ga0157374_10003346 3300013296 Bacteria 13464
111 Ga0157374_10003615 3300013296 Bacteria 13018
112 Ga0157374_10019577 3300013296 Bacteria 5992
113 Ga0157374_10128849 3300013296 Bacteria 2447
114 Ga0157378_10005307 3300013297 Bacteria 11314
115 Ga0157378_10053266 3300013297 Bacteria 3603
116 Ga0163162_10000012 3300013306 Bacteria 292674
117 Ga0163162_10003011 3300013306 Bacteria 16104
118 Ga0163162_10030596 3300013306 Bacteria 5334
119 Ga0163162_10038311 3300013306 Bacteria 4784
120 Ga0157372_10000039 3300013307 Bacteria 165839
121 Ga0157372_10000241 3300013307 Bacteria 60488
122 Ga0157372_10001854 3300013307 Bacteria 22916
123 Ga0157372_10017406 3300013307 Bacteria 7713
124 Ga0157372_10018870 3300013307 Bacteria 7421
125 Ga0157372_10029784 3300013307 Bacteria 5965
126 Ga0157372_10033501 3300013307 Bacteria 5643
127 Ga0157372_10222993 3300013307 Bacteria 2185
128 Ga0157375_10166822 3300013308 Bacteria 2347
129 Ga0157380_10062913 3300014326 Bacteria 2974
130 Ga0157377_10076375 3300014745 Bacteria 1948
131 Ga0157376_10183592 3300014969 Bacteria 1914
132 Ga0182007_10028626 3300015262 Bacteria 1912
133 Ga0206351_10243580 3300020077 Bacteria 3100
134 Ga0213872_10018613 3300021361 Bacteria 3201
135 Ga0213876_10023563 3300021384 Bacteria 3252
136 Ga0207427_100204 3300025231 Bacteria 54529
137 Ga0209437_100048 3300025233 Bacteria 405107
138 Ga0209437_100119 3300025233 Bacteria 206549
139 Ga0209026_1000201 3300025250 Bacteria 82838
140 Ga0209026_1002906 3300025250 Bacteria 6011
141 Ga0209129_1006975 3300025258 Bacteria 3485
142 Ga0209233_1000029 3300025261 Bacteria 641642
143 Ga0209233_1000790 3300025261 Bacteria 14239
144 Ga0209233_1005555 3300025261 Bacteria 4171
145 Ga0207647_10000018 3300025904 Bacteria 124816
146 Ga0207647_10000572 3300025904 Bacteria 28706
147 Ga0207645_10000289 3300025907 Bacteria 42106
148 Ga0207705_10000035 3300025909 Bacteria 201649
149 Ga0207705_10024780 3300025909 Bacteria 4282
150 Ga0207705_10040124 3300025909 Bacteria 3356
151 Ga0207705_10043558 3300025909 Bacteria 3225
152 Ga0207654_10003200 3300025911 Bacteria 8278
153 Ga0207654_10005565 3300025911 Bacteria 6372
154 Ga0207695_10000053 3300025913 Bacteria 396740
155 Ga0207695_10015413 3300025913 Bacteria 8999
156 Ga0207695_10031624 3300025913 Bacteria 5801
157 Ga0207695_10063268 3300025913 Bacteria 3815
158 Ga0207695_10073457 3300025913 Bacteria 3485
159 Ga0207671_10001012 3300025914 Bacteria 34397
160 Ga0207671_10001124 3300025914 Bacteria 32186
161 Ga0207671_10003065 3300025914 Bacteria 17083
162 Ga0207671_10005437 3300025914 Bacteria 11726
163 Ga0207671_10006489 3300025914 Bacteria 10412
164 Ga0207671_10075907 3300025914 Bacteria 2514
165 Ga0207660_10031408 3300025917 Bacteria 3657
166 Ga0207657_10015147 3300025919 Bacteria 7488
167 Ga0207657_10016349 3300025919 Bacteria 7158
168 Ga0207657_10020435 3300025919 Bacteria 6257
169 Ga0207652_10000171 3300025921 Bacteria 69902
170 Ga0207652_10000739 3300025921 Bacteria 31538
171 Ga0207694_10174667 3300025924 Bacteria 1740
172 Ga0207690_10002237 3300025932 Bacteria 11810
173 Ga0207690_10003489 3300025932 Bacteria 9377
174 Ga0207706_10000013 3300025933 Bacteria 188236
175 Ga0207706_10192164 3300025933 Bacteria 1792
176 Ga0207704_10000344 3300025938 Bacteria 21602
177 Ga0207661_10044061 3300025944 Bacteria 3524
178 Ga0207667_10000039 3300025949 Bacteria 278843
179 Ga0207667_10000539 3300025949 Bacteria 49978
180 Ga0207667_10007247 3300025949 Bacteria 13379
181 Ga0207667_10048098 3300025949 Bacteria 4511
182 Ga0207667_10051265 3300025949 Bacteria 4351
183 Ga0207651_10036397 3300025960 Bacteria 3212
184 Ga0207677_10004194 3300026023 Bacteria 7712
185 Ga0207639_10008901 3300026041 Bacteria 6905
186 Ga0207639_10009267 3300026041 Bacteria 6789
187 Ga0207678_10056050 3300026067 Bacteria 3394
188 Ga0207702_10001661 3300026078 Bacteria 21973
189 Ga0207702_10123438 3300026078 Bacteria 2321
190 Ga0207648_10000081 3300026089 Bacteria 90676
191 Ga0207674_10031681 3300026116 Bacteria 5551
192 Ga0207683_10007859 3300026121 Bacteria 9127
193 Ga0207698_10001651 3300026142 Bacteria 13013
194 Ga0207698_10002460 3300026142 Bacteria 10980
195 Ga0268266_10000053 3300028379 Bacteria 295181
196 Ga0268265_10180013 3300028380 Bacteria 1815
197 Ga0307517_10000447 3300028786 Bacteria 70799
198 Ga0307515_10000747 3300028794 Bacteria 75231
199 Ga0307515_10048251 3300028794 Bacteria 6443
200 Ga0307515_10060345 3300028794 Bacteria 5411
201 Ga0307515_10112209 3300028794 Bacteria 3173
202 Ga0307515_10157907 3300028794 Bacteria 2330
203 Ga0265327_10000098 3300031251 Bacteria 190693
204 Ga0265327_10000338 3300031251 Bacteria 88898
205 Ga0265327_10002291 3300031251 Bacteria 20526
206 Ga0307509_10062129 3300031507 Bacteria 3940
207 Ga0307408_100000151 3300031548 Bacteria 77679
208 Ga0307408_100002316 3300031548 Bacteria 13509
209 Ga0307408_100006932 3300031548 Bacteria 7500
210 Ga0307412_10005393 3300031911 Bacteria 7177
211 Ga0307412_10072314 3300031911 Bacteria 2356
212 Ga0307412_10084632 3300031911 Bacteria 2202
213 Ga0307414_10000124 3300032004 Bacteria 53995
214 Ga0307414_10002760 3300032004 Bacteria 9245
215 Ga0307507_10002469 3300033179 Bacteria 38697
216 Ga0307510_10006968 3300033180 Bacteria 13475
217 Ga0316584_0056011 3300036712 Bacteria 2952
218 Ga0395899_0000027 3300037312 Bacteria 337387
219 Ga0395899_0000282 3300037312 Bacteria 66053
220 Ga0395899_0006381 3300037312 Bacteria 9133
221 Ga0395899_0014589 3300037312 Bacteria 5997
222 Ga0395899_0158997 3300037312 Bacteria 1597
223 Ga0395900_0000195 3300037418 Bacteria 97204
224 Ga0395900_0002728 3300037418 Bacteria 19289
225 Ga0395900_0100468 3300037418 Bacteria 2972
226 Ga0395900_0154060 3300037418 Bacteria 2348
227 Ga0395900_0171102 3300037418 Bacteria 2211
228 Ga0395905_0001588 3300037471 Bacteria 27060
229 Ga0395905_0005471 3300037471 Bacteria 12952
230 Ga0395905_0047420 3300037471 Bacteria 4026
231 Ga0395905_0168334 3300037471 Bacteria 2059
232 Ga0395901_0000565 3300038443 Bacteria 42982
233 Ga0395901_0130069 3300038443 Bacteria 2645
234 Ga0436365_0228761 3300039437 Bacteria 7777
235 Ga0436365_0699199 3300039437 Bacteria 1886
236 Ga0436361_0561948 3300039447 Bacteria 3765
237 Ga0439448_0012941 3300042005 Bacteria 2503
238 Ga0451577_0004891 3300042876 Bacteria 13965
239 Ga0466961_0051963 3300044693 Bacteria 2616
240 Ga0453684_0005026 3300044712 Bacteria 26855
241 Ga0453684_0019261 3300044712 Bacteria 10403
242 Ga0451576_0052341 3300045051 Bacteria 4278
243 Ga0451576_0073084 3300045051 Bacteria 3569
244 Ga0495650_0000144 3300046471 Bacteria 165957
245 Ga0495585_0000091 3300046492 Bacteria 95620
246 Ga0495585_0000969 3300046492 Bacteria 24117
247 Ga0495583_0020339 3300046506 Bacteria 3442
248 Ga0495606_0000430 3300046507 Bacteria 69872
249 Ga0495606_0021084 3300046507 Bacteria 4781
250 Ga0495606_0043072 3300046507 Bacteria 3014
251 Ga0495610_0001431 3300046512 Bacteria 21101
252 Ga0495644_0029776 3300046523 Bacteria 2062
253 Ga0495648_0004623 3300046524 Bacteria 11699
254 Ga0495652_0070535 3300046529 Bacteria 2920
255 Ga0495609_0004106 3300046538 Bacteria 8102
256 Ga0495609_0006491 3300046538 Bacteria 5961
257 Ga0495633_0000157 3300046558 Bacteria 89236
258 Ga0495668_0000086 3300046616 Bacteria 151960
259 Ga0495668_0001051 3300046616 Bacteria 29297
260 Ga0495625_0000059 3300046660 Bacteria 180330
261 Ga0495625_0001164 3300046660 Bacteria 33874
262 Ga0495625_0002989 3300046660 Bacteria 17514
263 Ga0495625_0057054 3300046660 Bacteria 2778
264 Ga0495661_0000652 3300046665 Bacteria 35124
265 Ga0495661_0003505 3300046665 Bacteria 11557
266 Ga0495649_0000031 3300046694 Bacteria 151547
267 Ga0495660_0006224 3300046810 Bacteria 7083
268 Ga0495636_0000036 3300047318 Bacteria 57308
269 Ga0495672_0021904 3300047320 Bacteria 4162
270 Ga0495687_000220 3300047443 Bacteria 80993
271 Ga0495687_003826 3300047443 Bacteria 10608
272 Ga0495673_0034230 3300047469 Bacteria 2350
273 Ga0495686_0000621 3300047472 Bacteria 48956
274 Ga0495686_0001616 3300047472 Bacteria 23653
275 Ga0495614_0033315 3300048089 Bacteria 2216
276 Ga0501034_0012037 3300049571 Bacteria 8943
277 Ga0501034_0191468 3300049571 Bacteria 2007
278 Ga0501223_003901 3300049663 Bacteria 3220
279 Ga0501238_001103 3300049671 Bacteria 3074
280 Ga0501259_000124 3300049688 Bacteria 11295
281 Ga0501268_002478 3300049765 Bacteria 2437
282 Ga0501044_0051550 3300049823 Bacteria 4242
283 nmdc:mga0k408_25042_c1 3300050493 Bacteria 3377
284 nmdc:mga0k408_2915_c1 3300050493 Bacteria 9063
285 Ga0500635_0006535 3300053080 Bacteria 3120
286 Ga0500608_000751 3300053122 Bacteria 11835
287 Ga0500622_0000727 3300053156 Bacteria 28781
288 Ga0500624_001313 3300053157 Bacteria 4267

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300037312 Ga0395899_0158997 Ga0395899_0158997_354_1583 403
2 3300037418 Ga0395900_0171102 Ga0395900_0171102_900_2192 424
3 3300036712 Ga0316584_0056011 Ga0316584_0056011_1362_2708 438
4 3300049765 Ga0501268_002478 Ga0501268_002478_73_1500 441
5 3300046529 Ga0495652_0070535 Ga0495652_0070535_44_1420 445
6 3300025944 Ga0207661_10044061 Ga0207661_100440613 453
7 3300049671 Ga0501238_001103 Ga0501238_001103_669_2048 453
8 3300003203 JGI25406J46586_10025460 JGI25406J46586_100254601 454
9 3300005985 Ga0081539_10001436 Ga0081539_1000143637 454
10 3300031251 Ga0265327_10002291 Ga0265327_1000229121 457
11 3300039437 Ga0436365_0699199 Ga0436365_0699199_35_1456 458
12 3300046616 Ga0495668_0001051 Ga0495668_0001051_18987_20483 459
13 3300047320 Ga0495672_0021904 Ga0495672_0021904_1535_3061 459
14 3300005337 Ga0070682_100016359 Ga0070682_1000163594 461
15 3300005530 Ga0070679_100008525 Ga0070679_1000085259 461
16 3300005616 Ga0068852_100002617 Ga0068852_1000026178 461
17 3300013307 Ga0157372_10222993 Ga0157372_102229932 461
18 3300025909 Ga0207705_10043558 Ga0207705_100435583 461
19 3300025919 Ga0207657_10020435 Ga0207657_100204354 461
20 3300025921 Ga0207652_10000739 Ga0207652_1000073929 461
21 3300026142 Ga0207698_10001651 Ga0207698_100016515 461
22 3300005327 Ga0070658_10013748 Ga0070658_100137484 462
23 3300047472 Ga0495686_0001616 Ga0495686_0001616_10779_12251 462
24 3300005327 Ga0070658_10107344 Ga0070658_101073441 463
25 3300005336 Ga0070680_100203365 Ga0070680_1002033651 463
26 3300005458 Ga0070681_10061123 Ga0070681_100611232 463
27 3300005530 Ga0070679_100133214 Ga0070679_1001332142 463
28 3300005563 Ga0068855_100004384 Ga0068855_10000438418 463
29 3300013102 Ga0157371_10004640 Ga0157371_1000464013 463
30 3300013102 Ga0157371_10025038 Ga0157371_100250384 463
31 3300013104 Ga0157370_10001314 Ga0157370_1000131419 463
32 3300013105 Ga0157369_10079102 Ga0157369_100791023 463
33 3300013297 Ga0157378_10005307 Ga0157378_100053078 463
34 3300013307 Ga0157372_10033501 Ga0157372_100335016 463
35 3300025261 Ga0209233_1005555 Ga0209233_10055552 463
36 3300025909 Ga0207705_10040124 Ga0207705_100401243 463
37 3300025917 Ga0207660_10031408 Ga0207660_100314083 463
38 3300025921 Ga0207652_10000171 Ga0207652_1000017120 463
39 3300025949 Ga0207667_10000539 Ga0207667_1000053923 463
40 3300038443 Ga0395901_0130069 Ga0395901_0130069_1174_2589 463
41 iso_pu_bacteria 2839989709 2839991471 463
42 3300005327 Ga0070658_10090295 Ga0070658_100902951 464
43 3300005331 Ga0070670_100127642 Ga0070670_1001276421 464
44 3300005339 Ga0070660_100005808 Ga0070660_1000058086 464
45 3300005339 Ga0070660_100051089 Ga0070660_1000510891 464
46 3300005367 Ga0070667_100230384 Ga0070667_1002303842 464
47 3300005458 Ga0070681_10082588 Ga0070681_100825882 464
48 3300005530 Ga0070679_100077225 Ga0070679_1000772252 464
49 3300005530 Ga0070679_100117971 Ga0070679_1001179712 464
50 3300005563 Ga0068855_100060985 Ga0068855_1000609854 464
51 3300005614 Ga0068856_100064185 Ga0068856_1000641852 464
52 3300009093 Ga0105240_10062551 Ga0105240_100625514 464
53 3300009174 Ga0105241_10003646 Ga0105241_1000364610 464
54 3300009545 Ga0105237_10016737 Ga0105237_100167375 464
55 3300010375 Ga0105239_10016717 Ga0105239_100167176 464
56 3300013306 Ga0163162_10030596 Ga0163162_100305967 464
57 3300025911 Ga0207654_10005565 Ga0207654_100055657 464
58 3300025913 Ga0207695_10031624 Ga0207695_100316246 464
59 3300025914 Ga0207671_10075907 Ga0207671_100759072 464
60 3300026078 Ga0207702_10123438 Ga0207702_101234382 464
61 3300028380 Ga0268265_10180013 Ga0268265_101800131 464
62 3300044712 Ga0453684_0019261 Ga0453684_0019261_137_1549 464
63 3300037418 Ga0395900_0154060 Ga0395900_0154060_868_2286 465
64 3300037471 Ga0395905_0005471 Ga0395905_0005471_6096_7514 465
65 3300047318 Ga0495636_0000036 Ga0495636_0000036_44102_45538 465
66 3300005327 Ga0070658_10031463 Ga0070658_100314634 466
67 3300006237 Ga0097621_100057466 Ga0097621_1000574662 466
68 3300013296 Ga0157374_10128849 Ga0157374_101288492 466
69 3300014326 Ga0157380_10062913 Ga0157380_100629132 466
70 3300025909 Ga0207705_10024780 Ga0207705_100247804 466
71 3300031251 Ga0265327_10000338 Ga0265327_1000033868 466
72 3300032004 Ga0307414_10000124 Ga0307414_1000012453 466
73 3300032004 Ga0307414_10002760 Ga0307414_100027608 466
74 3300042876 Ga0451577_0004891 Ga0451577_0004891_775_2235 466
75 3300044712 Ga0453684_0005026 Ga0453684_0005026_21007_22467 466
76 3300045051 Ga0451576_0073084 Ga0451576_0073084_155_1615 466
77 3300048089 Ga0495614_0033315 Ga0495614_0033315_735_2192 466
78 iso_pu_bacteria 2884634485 2884636513 466
79 iso_pu_bacteria 2919692658 2919696462 466
80 3300045051 Ga0451576_0052341 Ga0451576_0052341_2196_3662 467
81 3300003320 rootH2_10044089 rootH2_100440893 468
82 3300049571 Ga0501034_0012037 Ga0501034_0012037_3166_4593 468
83 3300049571 Ga0501034_0191468 Ga0501034_0191468_320_1747 468
84 3300049823 Ga0501044_0051550 Ga0501044_0051550_1662_3089 468
85 iso_pu_bacteria 2890737413 2890739093 468
86 iso_pu_bacteria 2898713307 2898713833 468
87 3300005329 Ga0070683_100014564 Ga0070683_1000145644 469
88 3300005614 Ga0068856_100009491 Ga0068856_1000094919 469
89 3300013307 Ga0157372_10018870 Ga0157372_100188708 469
90 3300014969 Ga0157376_10183592 Ga0157376_101835922 469
91 3300021384 Ga0213876_10023563 Ga0213876_100235633 469
92 3300037312 Ga0395899_0014589 Ga0395899_0014589_4291_5769 469
93 3300037418 Ga0395900_0002728 Ga0395900_0002728_10224_11702 469
94 3300037471 Ga0395905_0001588 Ga0395905_0001588_16000_17478 469
95 3300038443 Ga0395901_0000565 Ga0395901_0000565_15272_16750 469
96 3300039437 Ga0436365_0228761 Ga0436365_0228761_3117_4538 469
97 iso_pu_bacteria 2739367866 2740032747 469
98 3300005455 Ga0070663_100116864 Ga0070663_1001168641 470
99 3300009553 Ga0105249_10083533 Ga0105249_100835332 470
100 3300013297 Ga0157378_10053266 Ga0157378_100532663 470
101 3300013306 Ga0163162_10038311 Ga0163162_100383112 470
102 3300013308 Ga0157375_10166822 Ga0157375_101668221 470
103 3300031251 Ga0265327_10000098 Ga0265327_10000098152 470
104 3300005327 Ga0070658_10000008 Ga0070658_10000008297 471
105 3300005563 Ga0068855_100004951 Ga0068855_10000495110 471
106 3300010375 Ga0105239_10085760 Ga0105239_100857602 471
107 3300025909 Ga0207705_10000035 Ga0207705_1000003538 471
108 3300025949 Ga0207667_10051265 Ga0207667_100512652 471
109 3300028794 Ga0307515_10112209 Ga0307515_101122092 471
110 3300042005 Ga0439448_0012941 Ga0439448_0012941_884_2335 471
111 iso_pu_bacteria 2852623160 2852625604 471
112 iso_pu_bacteria 2884933994 2884934603 471
113 3300046810 Ga0495660_0006224 Ga0495660_0006224_4532_5959 472
114 3300003316 rootH1_10145579 rootH1_101455794 473
115 3300003323 rootH1_10017449 rootH1_100174494 473
116 3300005329 Ga0070683_100012118 Ga0070683_1000121182 473
117 3300005339 Ga0070660_100006772 Ga0070660_1000067725 473
118 3300005366 Ga0070659_100000107 Ga0070659_1000001074 473
119 3300005535 Ga0070684_100009146 Ga0070684_1000091461 473
120 3300013100 Ga0157373_10000271 Ga0157373_1000027120 473
121 3300013307 Ga0157372_10001854 Ga0157372_100018546 473
122 3300025919 Ga0207657_10015147 Ga0207657_100151474 473
123 3300025932 Ga0207690_10002237 Ga0207690_100022377 473
124 3300025933 Ga0207706_10192164 Ga0207706_101921642 473
125 3300031548 Ga0307408_100000151 Ga0307408_10000015165 473
126 3300031911 Ga0307412_10072314 Ga0307412_100723142 473
127 3300047443 Ga0495687_003826 Ga0495687_003826_2918_4348 473
128 3300049663 Ga0501223_003901 Ga0501223_003901_831_2270 473
129 3300005563 Ga0068855_100000260 Ga0068855_10000026060 474
130 3300005563 Ga0068855_100248923 Ga0068855_1002489231 474
131 3300025949 Ga0207667_10000039 Ga0207667_1000003959 474
132 3300053122 Ga0500608_000751 Ga0500608_000751_3039_4547 474
133 3300013296 Ga0157374_10019577 Ga0157374_100195774 475
134 3300021361 Ga0213872_10018613 Ga0213872_100186132 475
135 3300025914 Ga0207671_10005437 Ga0207671_100054374 475
136 3300013104 Ga0157370_10046039 Ga0157370_100460392 476
137 3300025250 Ga0209026_1002906 Ga0209026_10029062 476
138 3300031911 Ga0307412_10084632 Ga0307412_100846322 476
139 3300039447 Ga0436361_0561948 Ga0436361_0561948_1410_2873 476
140 3300046523 Ga0495644_0029776 Ga0495644_0029776_261_1787 476
141 3300003320 rootH2_10017735 rootH2_100177357 477
142 3300013100 Ga0157373_10011822 Ga0157373_100118223 477
143 3300013102 Ga0157371_10005703 Ga0157371_100057038 477
144 3300013307 Ga0157372_10000241 Ga0157372_1000024110 477
145 3300025904 Ga0207647_10000572 Ga0207647_100005723 477
146 3300025932 Ga0207690_10003489 Ga0207690_100034896 477
147 3300026116 Ga0207674_10031681 Ga0207674_100316811 477
148 3300037471 Ga0395905_0168334 Ga0395905_0168334_413_1855 477
149 3300046665 Ga0495661_0000652 Ga0495661_0000652_1080_2537 478
150 3300002077 JGI24744J21845_10001162 JGI24744J21845_100011624 479
151 3300005328 Ga0070676_10000065 Ga0070676_100000657 479
152 3300005338 Ga0068868_100007786 Ga0068868_1000077866 479
153 3300005364 Ga0070673_100012325 Ga0070673_1000123255 479
154 3300005456 Ga0070678_100002126 Ga0070678_1000021268 479
155 3300005459 Ga0068867_100000211 Ga0068867_10000021123 479
156 3300005616 Ga0068852_100005428 Ga0068852_1000054288 479
157 3300005718 Ga0068866_10011685 Ga0068866_100116853 479
158 3300006237 Ga0097621_100000016 Ga0097621_10000001625 479
159 3300006358 Ga0068871_100000494 Ga0068871_10000049416 479
160 3300006881 Ga0068865_100000063 Ga0068865_10000006324 479
161 3300025907 Ga0207645_10000289 Ga0207645_1000028912 479
162 3300025914 Ga0207671_10003065 Ga0207671_100030655 479
163 3300025924 Ga0207694_10174667 Ga0207694_101746671 479
164 3300025938 Ga0207704_10000344 Ga0207704_100003445 479
165 3300025960 Ga0207651_10036397 Ga0207651_100363972 479
166 3300026023 Ga0207677_10004194 Ga0207677_100041942 479
167 3300026041 Ga0207639_10008901 Ga0207639_100089015 479
168 3300026089 Ga0207648_10000081 Ga0207648_1000008129 479
169 3300026121 Ga0207683_10007859 Ga0207683_100078597 479
170 3300026142 Ga0207698_10002460 Ga0207698_100024605 479
171 3300031548 Ga0307408_100002316 Ga0307408_1000023167 479
172 3300037418 Ga0395900_0100468 Ga0395900_0100468_1401_2882 479
173 3300046507 Ga0495606_0021084 Ga0495606_0021084_43_1488 479
174 3300009174 Ga0105241_10007919 Ga0105241_100079198 480
175 3300009545 Ga0105237_10001495 Ga0105237_1000149519 480
176 3300009551 Ga0105238_10016701 Ga0105238_100167012 480
177 3300010375 Ga0105239_10139938 Ga0105239_101399382 480
178 3300013296 Ga0157374_10003346 Ga0157374_100033463 480
179 3300049688 Ga0501259_000124 Ga0501259_000124_7388_8938 480
180 iso_pu_bacteria 2902048731 2902052032 480
181 iso_pu_bacteria 2977232053 2977234223 480
182 3300003320 rootH2_10017734 rootH2_100177342 481
183 3300005548 Ga0070665_100000061 Ga0070665_100000061110 481
184 3300009093 Ga0105240_10000082 Ga0105240_10000082105 481
185 3300009174 Ga0105241_10081091 Ga0105241_100810912 481
186 3300009545 Ga0105237_10010671 Ga0105237_100106716 481
187 3300009551 Ga0105238_10036712 Ga0105238_100367122 481
188 3300010375 Ga0105239_10003605 Ga0105239_100036054 481
189 3300010375 Ga0105239_10010361 Ga0105239_100103616 481
190 3300025913 Ga0207695_10000053 Ga0207695_10000053246 481
191 3300025914 Ga0207671_10001012 Ga0207671_100010124 481
192 3300025914 Ga0207671_10001124 Ga0207671_100011243 481
193 3300028379 Ga0268266_10000053 Ga0268266_1000005393 481
194 3300031548 Ga0307408_100006932 Ga0307408_1000069325 481
195 3300031911 Ga0307412_10005393 Ga0307412_100053935 481
196 3300046507 Ga0495606_0043072 Ga0495606_0043072_627_2111 481
197 iso_pu_bacteria 2919437846 2919440570 481
198 3300005539 Ga0068853_100006062 Ga0068853_1000060624 482
199 3300009093 Ga0105240_10004807 Ga0105240_100048077 482
200 3300009545 Ga0105237_10001478 Ga0105237_1000147827 482
201 3300013105 Ga0157369_10002910 Ga0157369_100029105 482
202 3300013306 Ga0163162_10000012 Ga0163162_10000012251 482
203 3300025261 Ga0209233_1000790 Ga0209233_10007908 482
204 3300025913 Ga0207695_10015413 Ga0207695_100154132 482
205 3300025949 Ga0207667_10048098 Ga0207667_100480983 482
206 3300026041 Ga0207639_10009267 Ga0207639_100092672 482
207 3300026067 Ga0207678_10056050 Ga0207678_100560502 482
208 3300037312 Ga0395899_0006381 Ga0395899_0006381_2438_3952 482
209 3300037418 Ga0395900_0000195 Ga0395900_0000195_90504_91994 482
210 3300037471 Ga0395905_0047420 Ga0395905_0047420_2296_3810 482
211 3300046492 Ga0495585_0000091 Ga0495585_0000091_90200_91657 482
212 3300005339 Ga0070660_100020009 Ga0070660_1000200093 483
213 3300005457 Ga0070662_100000472 Ga0070662_10000047212 483
214 3300005458 Ga0070681_10006056 Ga0070681_100060565 483
215 3300005539 Ga0068853_100138741 Ga0068853_1001387412 483
216 3300005563 Ga0068855_100000130 Ga0068855_10000013084 483
217 3300005563 Ga0068855_100314202 Ga0068855_1003142021 483
218 3300010375 Ga0105239_10000049 Ga0105239_1000004967 483
219 3300013296 Ga0157374_10003615 Ga0157374_100036154 483
220 3300015262 Ga0182007_10028626 Ga0182007_100286261 483
221 3300025904 Ga0207647_10000018 Ga0207647_100000187 483
222 3300025911 Ga0207654_10003200 Ga0207654_100032004 483
223 3300025913 Ga0207695_10063268 Ga0207695_100632682 483
224 3300025919 Ga0207657_10016349 Ga0207657_100163494 483
225 3300025933 Ga0207706_10000013 Ga0207706_10000013121 483
226 3300025949 Ga0207667_10007247 Ga0207667_100072477 483
227 3300033180 Ga0307510_10006968 Ga0307510_100069687 483
228 3300003316 rootH1_10022763 rootH1_100227635 484
229 3300006195 Ga0075366_10018414 Ga0075366_100184143 484
230 3300009093 Ga0105240_10028025 Ga0105240_100280255 484
231 3300009174 Ga0105241_10000116 Ga0105241_100001164 484
232 3300013306 Ga0163162_10003011 Ga0163162_100030116 484
233 3300013307 Ga0157372_10017406 Ga0157372_100174064 484
234 3300014745 Ga0157377_10076375 Ga0157377_100763751 484
235 3300028786 Ga0307517_10000447 Ga0307517_1000044711 484
236 3300028794 Ga0307515_10000747 Ga0307515_1000074736 484
237 3300028794 Ga0307515_10060345 Ga0307515_100603453 484
238 3300046471 Ga0495650_0000144 Ga0495650_0000144_75991_77445 484
239 3300046506 Ga0495583_0020339 Ga0495583_0020339_1596_3050 484
240 3300046507 Ga0495606_0000430 Ga0495606_0000430_35233_36687 484
241 3300046512 Ga0495610_0001431 Ga0495610_0001431_8337_9791 484
242 3300046538 Ga0495609_0006491 Ga0495609_0006491_1246_2700 484
243 3300046660 Ga0495625_0000059 Ga0495625_0000059_100775_102229 484
244 3300046665 Ga0495661_0003505 Ga0495661_0003505_4483_5937 484
245 3300046694 Ga0495649_0000031 Ga0495649_0000031_71999_73453 484
246 3300047469 Ga0495673_0034230 Ga0495673_0034230_243_1697 484
247 3300050493 nmdc:mga0k408_25042_c1 nmdc:mga0k408_25042_c1_143_1636 484
248 3300053080 Ga0500635_0006535 Ga0500635_0006535_1158_2639 484
249 3300009093 Ga0105240_10066114 Ga0105240_100661143 485
250 3300033179 Ga0307507_10002469 Ga0307507_1000246922 485
251 3300046492 Ga0495585_0000969 Ga0495585_0000969_8689_10194 485
252 3300046524 Ga0495648_0004623 Ga0495648_0004623_1930_3435 485
253 3300046616 Ga0495668_0000086 Ga0495668_0000086_121898_123403 485
254 3300046660 Ga0495625_0002989 Ga0495625_0002989_11982_13487 485
255 3300009093 Ga0105240_10099707 Ga0105240_100997072 486
256 3300009545 Ga0105237_10001876 Ga0105237_100018765 486
257 3300010375 Ga0105239_10000017 Ga0105239_10000017212 486
258 3300013102 Ga0157371_10002522 Ga0157371_1000252211 486
259 3300013105 Ga0157369_10151945 Ga0157369_101519451 486
260 3300013307 Ga0157372_10000039 Ga0157372_10000039112 486
261 3300025914 Ga0207671_10006489 Ga0207671_100064891 486
262 3300046660 Ga0495625_0001164 Ga0495625_0001164_5784_7283 486
263 3300037312 Ga0395899_0000282 Ga0395899_0000282_6275_7810 487
264 3300047472 Ga0495686_0000621 Ga0495686_0000621_43526_45022 487
265 3300002737 JGI25162J39368_1000928 JGI25162J39368_10009285 488
266 3300002772 JGI25164J39214_1000859 JGI25164J39214_10008595 488
267 3300003323 rootH1_10021718 rootH1_1002171812 488
268 3300003323 rootH1_10079778 rootH1_100797783 488
269 3300005614 Ga0068856_100000668 Ga0068856_10000066827 488
270 3300006195 Ga0075366_10002789 Ga0075366_100027894 488
271 3300009545 Ga0105237_10007469 Ga0105237_100074695 488
272 3300010375 Ga0105239_10005220 Ga0105239_100052203 488
273 3300025231 Ga0207427_100204 Ga0207427_1002045 488
274 3300025233 Ga0209437_100048 Ga0209437_100048327 488
275 3300025258 Ga0209129_1006975 Ga0209129_10069752 488
276 3300025261 Ga0209233_1000029 Ga0209233_100002949 488
277 3300025913 Ga0207695_10073457 Ga0207695_100734573 488
278 3300026078 Ga0207702_10001661 Ga0207702_100016618 488
279 3300028794 Ga0307515_10048251 Ga0307515_100482517 488
280 3300031507 Ga0307509_10062129 Ga0307509_100621293 488
281 3300046538 Ga0495609_0004106 Ga0495609_0004106_4411_5919 488
282 3300046558 Ga0495633_0000157 Ga0495633_0000157_30573_32081 488
283 3300046660 Ga0495625_0057054 Ga0495625_0057054_838_2346 488
284 3300047443 Ga0495687_000220 Ga0495687_000220_75705_77186 488
285 3300050493 nmdc:mga0k408_2915_c1 nmdc:mga0k408_2915_c1_6033_7520 488
286 3300002737 JGI25162J39368_1000016 JGI25162J39368_1000016224 489
287 3300010375 Ga0105239_10000740 Ga0105239_100007405 489
288 3300025233 Ga0209437_100119 Ga0209437_100119140 489
289 3300028794 Ga0307515_10157907 Ga0307515_101579072 489
290 3300044693 Ga0466961_0051963 Ga0466961_0051963_685_2238 489
291 3300053156 Ga0500622_0000727 Ga0500622_0000727_22376_23935 489
292 3300053157 Ga0500624_001313 Ga0500624_001313_1251_2741 489
293 3300025250 Ga0209026_1000201 Ga0209026_100020129 490
294 3300037312 Ga0395899_0000027 Ga0395899_0000027_223634_225625 490
295 iso_pu_bacteria 2599185184 2599481661 493
296 iso_pu_bacteria 2928147474 2928149280 493
297 iso_pu_bacteria 2928078545 2928082144 494
298 iso_pu_bacteria 2932082852 2932087663 494
299 3300005563 Ga0068855_100036234 Ga0068855_1000362345 497
300 3300001990 JGI24737J22298_10001070 JGI24737J22298_100010702 498
301 3300002067 JGI24735J21928_10000015 JGI24735J21928_1000001558 498
302 3300013307 Ga0157372_10029784 Ga0157372_100297841 498
303 3300020077 Ga0206351_10243580 Ga0206351_102435802 498

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00919

UPF0004

Uncharacterized protein family UPF0004

32

131

0.97

PF01938

TRAM

TRAM domain

473

536

0.96

PF04055

Radical_SAM

Radical SAM superfamily

179

419

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
7mjx-assembly1.cif.gz_A miab in the complex with 5'-deoxyadenosine, methionine and rna 0.9032 32 497
7mjz-assembly1.cif.gz_A the structure of miab with pentasulfide bridge 0.8994 32 497
2qgq-assembly1.cif.gz_A crystal structure of tm_1862 from thermotoga maritima. northeast structural genomics consortium target vr77 0.8979 174 497
2qgq-assembly4.cif.gz_D crystal structure of tm_1862 from thermotoga maritima. northeast structural genomics consortium target vr77 0.894 177 497
7mjx-assembly1.cif.gz_A miab in the complex with 5'-deoxyadenosine, methionine and rna 0.8936 32 497
ID Description Score Start End Superfamily
af_P0AEI1_3_129_3.40.50.12160 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Methylthiotransferase, N-terminal domain 0.9627 32 156 3.40.50.12160
af_A0A0R0IRV7_127_250_3.30.750.200 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA; 0.9525 314 422 3.30.750.200
af_P0AEI1_378_440_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.95 435 497 2.40.50.140
af_Q2FZ02_442_504_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.949 435 497 2.40.50.140
4jc0B03 Alpha Beta;2-Layer Sandwich;Transcription Regulator spoIIAA; 0.9486 316 435 3.30.750.200
ID Description Score Start End GO Terms
AF-A0A348SMV7-F1-model_v4 deleted 0.9776 32 111
AF-A0A355UA07-F1-model_v4 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.9763 275 435 GO:0005829
GO:0035597
GO:0046872
GO:0051539
AF-A0A855X3C7-F1-model_v4 tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase (EC 2.8.4.3) 0.9749 292 498 GO:0005829
GO:0035597
GO:0046872
GO:0051539
AF-A0A7S3AJ72-F1-model_v4 TRAM domain-containing protein 0.9738 340 497 GO:0005739
GO:0005829
GO:0035597
GO:0046872
GO:0051539
AF-A0A2N2ZAY2-F1-model_v4 tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB 0.9707 13 138 GO:0005829
GO:0035597
GO:0046872
GO:0051539

Feature Viewer

pLDDT pTM Quality
77.36 0.65 Medium
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map