F396513

General Info

Members Datasets Scaffolds Average Seq Length
302 159 604 306

Family's Representative Sequence

Representative Sequence 3300021388|Ga0213875_10026346|Ga0213875_100263463
Length 355
Sequence MGGDRGAGVLAVGLGLVAIADARRLVCDTATVRGLPENAANHEHRTMTTLLYTHPACLAHDPGEYHPESPARLRAVLEALSAPEFARLQRREAPAAPRDVIALVHPVALVDRLLAAVPQTGHVGIDADTIMSPGSGEAALRAAGAVVAAVDAVVAGEADNAFCAVRPPGHHAEPRRPMGFCLFNSIAIGALRARETHGIERVAVIDFDVHHGNGTQACFWDDAALFYASTHQYPLYPGTGGTRETGAAGNIVNVPLPPMAGSQQFRAAISRTIIPALDEFRPGLVLISAGFDAHKSDPLAQLQLDESDYTWVTEQLLAVAHTHAHGRVVSSLEGGYDLVALGASAAAHVRVLMSV

Samples

Sample ID Description Type Environment
1 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
2 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
7 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
8 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
9 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
12 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
22 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
36 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
39 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
40 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
41 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
42 3300009993 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_106 metaG Metagenome Rhizosphere
43 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
44 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
49 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
51 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
52 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
53 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
54 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
56 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
84 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
85 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
86 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
87 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
88 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
89 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
90 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
91 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
92 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
93 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
94 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
95 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
96 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
97 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
98 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
99 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
100 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
101 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
102 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
103 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
104 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
105 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
106 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
107 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
108 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
109 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
110 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
111 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
112 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
113 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
114 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
115 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
116 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
117 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
118 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
119 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
120 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
126 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
127 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
128 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
129 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
130 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
131 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
132 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
133 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
134 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
135 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
136 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
137 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
138 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
139 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
140 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
141 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
142 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
143 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
144 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
145 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
146 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
147 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
148 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
149 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
150 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
151 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
152 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
153 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
154 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
155 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
156 3300053731 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 endosphere Metagenome Endosphere
157 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
158 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
159 2937843397 Mesorhizobium xinjiangense lm94 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.35
Metatranscriptomes 2.32
Isolates 0.33

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.95
Nodule 0
Rhizoplane 3.31
Rhizosphere 84.77
Stem 0
Stem Tuber 0
Unclassified 0.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0213875_10026346 3300021388 Bacteria 2765
2 JGI24741J21665_1004336 3300001915 Bacteria 3170
3 JGI24741J21665_1010753 3300001915 Bacteria 1623
4 JGI24740J21852_10002051 3300001979 Bacteria 9215
5 JGI25153J46596_10000074 3300003215 Bacteria 114400
6 Ga0070683_100039225 3300005329 Bacteria 4347
7 Ga0070683_100122633 3300005329 Bacteria 2455
8 Ga0070683_100272442 3300005329 Bacteria 1610
9 Ga0070683_100414609 3300005329 Bacteria 1285
10 Ga0070680_100001541 3300005336 Bacteria 16804
11 Ga0070680_100009788 3300005336 Bacteria 7378
12 Ga0070680_100057282 3300005336 Bacteria 3186
13 Ga0070682_100463676 3300005337 Bacteria 973
14 Ga0070660_100071884 3300005339 Bacteria 2702
15 Ga0070691_10005697 3300005341 Bacteria 5680
16 Ga0070691_10044659 3300005341 Bacteria 2101
17 Ga0070661_100024543 3300005344 Bacteria 4324
18 Ga0070661_100025016 3300005344 Bacteria 4287
19 Ga0070661_100138846 3300005344 Bacteria 1830
20 Ga0070692_10000765 3300005345 Bacteria 10561
21 Ga0070692_10014679 3300005345 Bacteria 3686
22 Ga0070692_10047164 3300005345 Bacteria 2229
23 Ga0070692_10062072 3300005345 Bacteria 1971
24 Ga0070659_100055453 3300005366 Bacteria 3123
25 Ga0070659_100187589 3300005366 Bacteria 1699
26 Ga0070714_100291970 3300005435 Bacteria 1517
27 Ga0070713_100330543 3300005436 Bacteria 1410
28 Ga0070663_100003411 3300005455 Bacteria 9173
29 Ga0070663_100027179 3300005455 Bacteria 3882
30 Ga0070662_100049765 3300005457 Bacteria 3023
31 Ga0070681_10000088 3300005458 Bacteria 69295
32 Ga0070681_10004756 3300005458 Bacteria 13010
33 Ga0070681_10013670 3300005458 Bacteria 8079
34 Ga0070681_10021288 3300005458 Bacteria 6499
35 Ga0070681_10208221 3300005458 Bacteria 1872
36 Ga0070706_100022917 3300005467 Bacteria 5751
37 Ga0070699_100313215 3300005518 Bacteria 1409
38 Ga0070679_100000061 3300005530 Bacteria 80570
39 Ga0070679_100001245 3300005530 Bacteria 22426
40 Ga0070679_100016404 3300005530 Bacteria 7142
41 Ga0070679_100038842 3300005530 Bacteria 4733
42 Ga0070684_100064168 3300005535 Bacteria 3221
43 Ga0068853_100127673 3300005539 Bacteria 2273
44 Ga0068853_100200492 3300005539 Bacteria 1816
45 Ga0070696_100050048 3300005546 Bacteria 2904
46 Ga0070696_100070962 3300005546 Bacteria 2450
47 Ga0070696_100132198 3300005546 Bacteria 1817
48 Ga0068855_100003760 3300005563 Bacteria 18553
49 Ga0070664_100079455 3300005564 Bacteria 2823
50 Ga0068857_100100084 3300005577 Bacteria 2600
51 Ga0068857_100129282 3300005577 Bacteria 2277
52 Ga0068857_100184138 3300005577 Bacteria 1901
53 Ga0068854_100051152 3300005578 Bacteria 2959
54 Ga0068854_100198974 3300005578 Bacteria 1574
55 Ga0068856_100060283 3300005614 Bacteria 3749
56 Ga0068856_100119432 3300005614 Bacteria 2637
57 Ga0068856_100373347 3300005614 Bacteria 1445
58 Ga0068852_100018633 3300005616 Bacteria 5471
59 Ga0068852_100046284 3300005616 Bacteria 3706
60 Ga0068859_100462268 3300005617 Bacteria 1365
61 Ga0068851_10059637 3300005834 Bacteria 1952
62 Ga0068862_100043204 3300005844 Bacteria 3842
63 Ga0081538_10006698 3300005981 Bacteria 10089
64 Ga0081538_10024114 3300005981 Bacteria 4344
65 Ga0081539_10040680 3300005985 Bacteria 2726
66 Ga0070715_10003003 3300006163 Bacteria 5276
67 Ga0070712_100043355 3300006175 Bacteria 3097
68 Ga0097620_100462206 3300006931 Bacteria 1365
69 Ga0105240_10370081 3300009093 Bacteria 1621
70 Ga0105241_10169179 3300009174 Bacteria 1804
71 Ga0105242_10035371 3300009176 Bacteria 4007
72 Ga0105238_10001155 3300009551 Bacteria 26666
73 Ga0105238_10003317 3300009551 Bacteria 16071
74 Ga0105028_100493 3300009993 Bacteria 4209
75 Ga0157373_10013266 3300013100 Bacteria 6047
76 Ga0157373_10089650 3300013100 Bacteria 2166
77 Ga0157371_10008138 3300013102 Bacteria 8378
78 Ga0157371_10096499 3300013102 Bacteria 2095
79 Ga0157370_10004826 3300013104 Bacteria 15331
80 Ga0157370_10017745 3300013104 Bacteria 7174
81 Ga0157369_10020128 3300013105 Bacteria 7463
82 Ga0157369_10057299 3300013105 Bacteria 4204
83 Ga0157369_10334121 3300013105 Bacteria 1574
84 Ga0163162_10751697 3300013306 Bacteria 1094
85 Ga0157372_10022903 3300013307 Bacteria 6764
86 Ga0157372_10067762 3300013307 Bacteria 4012
87 Ga0157372_10185222 3300013307 Bacteria 2411
88 Ga0206356_10180828 3300020070 Bacteria 3977
89 Ga0206356_10925594 3300020070 Bacteria 1745
90 Ga0206356_10939095 3300020070 Bacteria 7341
91 Ga0206354_10583945 3300020081 Bacteria 7885
92 Ga0206353_11352825 3300020082 Bacteria 1952
93 Ga0206353_11399092 3300020082 Bacteria 2641
94 Ga0206353_11688311 3300020082 Bacteria 2308
95 Ga0209676_1012937 3300025292 Bacteria 3240
96 Ga0209758_1000136 3300025297 Bacteria 177081
97 Ga0209758_1013770 3300025297 Bacteria 4374
98 Ga0209050_1006328 3300025298 Bacteria 7049
99 Ga0209257_1000496 3300025304 Bacteria 70291
100 Ga0209257_1019401 3300025304 Bacteria 2563
101 Ga0207656_10016101 3300025321 Bacteria 2905
102 Ga0207647_10002440 3300025904 Bacteria 14092
103 Ga0207647_10009829 3300025904 Bacteria 6781
104 Ga0207685_10010605 3300025905 Bacteria 2730
105 Ga0207705_10000029 3300025909 Bacteria 239897
106 Ga0207705_10005193 3300025909 Bacteria 9761
107 Ga0207705_10008096 3300025909 Bacteria 7700
108 Ga0207705_10010039 3300025909 Bacteria 6891
109 Ga0207705_10130827 3300025909 Bacteria 1868
110 Ga0207684_10168591 3300025910 Bacteria 1887
111 Ga0207707_10000042 3300025912 Bacteria 126050
112 Ga0207707_10000144 3300025912 Bacteria 73715
113 Ga0207707_10000599 3300025912 Bacteria 36284
114 Ga0207707_10006660 3300025912 Bacteria 10076
115 Ga0207707_10011472 3300025912 Bacteria 7717
116 Ga0207707_10050310 3300025912 Bacteria 3630
117 Ga0207707_10151905 3300025912 Bacteria 2024
118 Ga0207695_10006715 3300025913 Bacteria 14852
119 Ga0207695_10010262 3300025913 Bacteria 11480
120 Ga0207695_10024525 3300025913 Bacteria 6781
121 Ga0207660_10000368 3300025917 Bacteria 29401
122 Ga0207660_10002186 3300025917 Bacteria 12946
123 Ga0207660_10005600 3300025917 Bacteria 8154
124 Ga0207660_10006347 3300025917 Bacteria 7665
125 Ga0207660_10007337 3300025917 Bacteria 7134
126 Ga0207660_10012464 3300025917 Bacteria 5564
127 Ga0207660_10022149 3300025917 Bacteria 4280
128 Ga0207657_10034120 3300025919 Bacteria 4580
129 Ga0207657_10081078 3300025919 Bacteria 2726
130 Ga0207649_10000543 3300025920 Bacteria 26079
131 Ga0207649_10017498 3300025920 Bacteria 4062
132 Ga0207649_10030045 3300025920 Bacteria 3214
133 Ga0207649_10083781 3300025920 Bacteria 2071
134 Ga0207652_10000082 3300025921 Bacteria 103057
135 Ga0207652_10000099 3300025921 Bacteria 93755
136 Ga0207652_10006102 3300025921 Bacteria 9747
137 Ga0207652_10008093 3300025921 Bacteria 8440
138 Ga0207652_10009940 3300025921 Bacteria 7659
139 Ga0207652_10014087 3300025921 Bacteria 6474
140 Ga0207652_10391964 3300025921 Bacteria 1253
141 Ga0207694_10028080 3300025924 Bacteria 4289
142 Ga0207700_10275416 3300025928 Bacteria 1446
143 Ga0207664_10375384 3300025929 Bacteria 1262
144 Ga0207690_10000096 3300025932 Bacteria 72704
145 Ga0207690_10007040 3300025932 Bacteria 6672
146 Ga0207690_10060229 3300025932 Bacteria 2575
147 Ga0207690_10165715 3300025932 Bacteria 1651
148 Ga0207706_10029731 3300025933 Bacteria 4876
149 Ga0207661_10003797 3300025944 Bacteria 10536
150 Ga0207661_10055892 3300025944 Bacteria 3167
151 Ga0207661_10425464 3300025944 Bacteria 1206
152 Ga0207679_10131905 3300025945 Bacteria 2006
153 Ga0207667_10000075 3300025949 Bacteria 169836
154 Ga0207667_10006240 3300025949 Bacteria 14465
155 Ga0207667_10023645 3300025949 Bacteria 6763
156 Ga0207667_10052909 3300025949 Bacteria 4274
157 Ga0207640_10001753 3300025981 Bacteria 11650
158 Ga0207640_10002006 3300025981 Bacteria 10994
159 Ga0207640_10005100 3300025981 Bacteria 7142
160 Ga0207640_10005611 3300025981 Bacteria 6841
161 Ga0207640_10023980 3300025981 Bacteria 3674
162 Ga0207639_10000540 3300026041 Bacteria 25965
163 Ga0207639_10016100 3300026041 Bacteria 5283
164 Ga0207639_10073766 3300026041 Bacteria 2676
165 Ga0207678_10006806 3300026067 Bacteria 10138
166 Ga0207678_10026702 3300026067 Bacteria 5038
167 Ga0207678_10042842 3300026067 Bacteria 3919
168 Ga0207702_10005769 3300026078 Bacteria 10769
169 Ga0207702_10033320 3300026078 Bacteria 4302
170 Ga0207702_10071627 3300026078 Bacteria 2985
171 Ga0207674_10029374 3300026116 Bacteria 5787
172 Ga0207674_10036490 3300026116 Bacteria 5120
173 Ga0207674_10184219 3300026116 Bacteria 2038
174 Ga0207698_10001070 3300026142 Bacteria 15918
175 Ga0207698_10006699 3300026142 Bacteria 7197
176 Ga0207698_10012838 3300026142 Bacteria 5502
177 Ga0207698_10117932 3300026142 Bacteria 2240
178 Ga0268265_10015806 3300028380 Bacteria 5174
179 Ga0268264_10068003 3300028381 Bacteria 3009
180 Ga0307515_10143883 3300028794 Bacteria 2539
181 Ga0265328_10003496 3300031239 Bacteria 6935
182 Ga0265331_10000012 3300031250 Bacteria 297201
183 Ga0265327_10000206 3300031251 Bacteria 123199
184 Ga0265316_10079223 3300031344 Bacteria 2521
185 Ga0265316_10154859 3300031344 Bacteria 1715
186 Ga0307513_10074461 3300031456 Bacteria 3531
187 Ga0307513_10098300 3300031456 Bacteria 2959
188 Ga0316576_10144264 3300031727 Bacteria 1793
189 Ga0316578_10020262 3300031728 Bacteria 3672
190 Ga0316578_10083633 3300031728 Bacteria 1901
191 Ga0307407_10038691 3300031903 Bacteria 2646
192 Ga0307416_100521221 3300032002 Bacteria 1257
193 Ga0373935_0145659 3300035692 Bacteria 1603
194 Ga0373927_0388185 3300035695 Bacteria 921
195 Ga0373947_0012725 3300035725 Bacteria 4824
196 Ga0373937_0019518 3300036401 Bacteria 6065
197 Ga0316584_0010001 3300036712 Bacteria 6608
198 Ga0373925_0258062 3300037068 Bacteria 1399
199 Ga0373925_0349040 3300037068 Bacteria 1201
200 Ga0395900_0024547 3300037418 Bacteria 6172
201 Ga0395900_0140036 3300037418 Bacteria 2478
202 Ga0395900_0227732 3300037418 Bacteria 1876
203 Ga0395898_0083726 3300037466 Bacteria 3074
204 Ga0395898_0268445 3300037466 Bacteria 1627
205 Ga0436364_0477878 3300037853 Bacteria 3517
206 Ga0436364_1215387 3300037853 Bacteria 105146
207 Ga0395901_0040785 3300038443 Bacteria 4808
208 Ga0395901_0158137 3300038443 Bacteria 2380
209 Ga0395901_0186995 3300038443 Bacteria 2172
210 Ga0395901_0203271 3300038443 Bacteria 2076
211 Ga0400483_003798 3300039062 Bacteria 3464
212 Ga0400483_096361 3300039062 Bacteria 7660
213 Ga0400483_112664 3300039062 Bacteria 4159
214 Ga0400483_268269 3300039062 Bacteria 1923
215 Ga0436365_1125111 3300039437 Bacteria 2661
216 Ga0436361_1163644 3300039447 Bacteria 4760
217 Ga0436363_0463920 3300039450 Bacteria 1653
218 Ga0439453_0002141 3300041408 Bacteria 2678
219 Ga0466960_0189720 3300044901 Bacteria 1118
220 Ga0495580_0107671 3300046472 Bacteria 1935
221 Ga0496101_0059189 3300048904 Bacteria 2776
222 Ga0496102_0053097 3300048905 Bacteria 3695
223 Ga0496102_0118703 3300048905 Bacteria 2469
224 Ga0496104_0065164 3300048907 Bacteria 3456
225 Ga0496109_0021308 3300048912 Bacteria 5730
226 Ga0496110_0024061 3300048913 Bacteria 5189
227 Ga0496111_0052255 3300048914 Bacteria 2950
228 Ga0496113_0111623 3300048916 Bacteria 2129
229 Ga0496114_0024288 3300048917 Bacteria 4946
230 Ga0496115_0177249 3300048918 Bacteria 1762
231 Ga0501036_0158632 3300049572 Bacteria 1908
232 Ga0501036_0283574 3300049572 Bacteria 1386
233 Ga0501037_0001353 3300049573 Bacteria 17990
234 Ga0501037_0043377 3300049573 Bacteria 3306
235 Ga0501037_0286428 3300049573 Bacteria 1147
236 Ga0501038_0187159 3300049574 Bacteria 1668
237 Ga0501039_0035726 3300049575 Bacteria 3836
238 Ga0501040_0157800 3300049576 Bacteria 1603
239 Ga0501042_0032398 3300049578 Bacteria 3701
240 Ga0501046_0061811 3300049580 Bacteria 2927
241 Ga0501047_0000722 3300049581 Bacteria 34348
242 Ga0501047_0025494 3300049581 Bacteria 5684
243 Ga0501067_0140472 3300049583 Bacteria 1345
244 Ga0501068_0009102 3300049584 Bacteria 5542
245 Ga0501069_0012420 3300049585 Bacteria 4527
246 Ga0501069_0061657 3300049585 Bacteria 2094
247 Ga0501070_0018829 3300049586 Bacteria 5792
248 Ga0501070_0040334 3300049586 Bacteria 3893
249 Ga0501070_0107602 3300049586 Bacteria 2304
250 Ga0501070_0329035 3300049586 Bacteria 1242
251 Ga0501072_0036131 3300049588 Bacteria 3872
252 Ga0501072_0074536 3300049588 Bacteria 2684
253 Ga0501073_0030291 3300049589 Bacteria 3863
254 Ga0501073_0058656 3300049589 Bacteria 2690
255 Ga0501073_0077438 3300049589 Bacteria 2314
256 Ga0501073_0109363 3300049589 Bacteria 1917
257 Ga0501073_0136313 3300049589 Bacteria 1701
258 Ga0501074_0003496 3300049590 Bacteria 11151
259 Ga0501076_0108633 3300049592 Bacteria 2241
260 Ga0501077_0082208 3300049593 Bacteria 2041
261 Ga0501079_0120080 3300049741 Bacteria 2044
262 Ga0501079_0324392 3300049741 Bacteria 1205
263 Ga0501080_0000480 3300049742 Bacteria 31084
264 Ga0501080_0013083 3300049742 Bacteria 7620
265 Ga0501080_0037810 3300049742 Bacteria 4506
266 Ga0501080_0067760 3300049742 Bacteria 3320
267 Ga0501080_0109988 3300049742 Bacteria 2554
268 Ga0501080_0118033 3300049742 Bacteria 2459
269 Ga0501081_0355392 3300049743 Bacteria 1080
270 Ga0501083_0004129 3300049744 Bacteria 10222
271 Ga0501083_0010176 3300049744 Bacteria 6628
272 Ga0501083_0017298 3300049744 Bacteria 5026
273 Ga0501083_0057920 3300049744 Unclassified 2593
274 Ga0501035_0154090 3300049822 Bacteria 1992
275 Ga0501044_0005471 3300049823 Bacteria 14107
276 Ga0501044_0015978 3300049823 Bacteria 8076
277 Ga0501044_0026939 3300049823 Bacteria 6082
278 Ga0501044_0145187 3300049823 Bacteria 2359
279 Ga0501045_0151876 3300049824 Bacteria 1723
280 Ga0501045_0372668 3300049824 Bacteria 1062
281 Ga0500578_0071955 3300053086 Bacteria 2204
282 Ga0500644_0069929 3300053088 Bacteria 1262
283 Ga0500651_0148772 3300053093 Bacteria 1407
284 Ga0500641_0008525 3300053096 Bacteria 3662
285 Ga0500555_002770 3300053103 Bacteria 5030
286 Ga0500594_0011788 3300053118 Bacteria 2046
287 Ga0500595_000384 3300053119 Bacteria 28472
288 Ga0500642_0000997 3300053130 Bacteria 8123
289 Ga0500655_011432 3300053133 Bacteria 1609
290 Ga0500658_0019778 3300053134 Bacteria 2537
291 Ga0500588_0000860 3300053146 Bacteria 5311
292 Ga0500604_0001201 3300053151 Bacteria 7216
293 Ga0500604_0006085 3300053151 Bacteria 3185
294 Ga0500616_0001742 3300053153 Bacteria 19945
295 Ga0500616_0067219 3300053153 Bacteria 1838
296 Ga0500609_000075 3300053731 Bacteria 12803
297 Ga0500609_014668 3300053731 Bacteria 1061
298 Ga0501082_0001220 3300060353 Bacteria 22590
299 Ga0501082_0007552 3300060353 Bacteria 9380
300 Ga0501082_0034867 3300060353 Bacteria 4337
301 Ga0530510_0057385 3300061734 Bacteria 2813
302 2937846536 2937843397 Bacteria 5256375
303 Ga0213875_10026346
304 JGI24741J21665_1004336
305 JGI24741J21665_1010753
306 JGI24740J21852_10002051
307 JGI25153J46596_10000074
308 Ga0070683_100039225
309 Ga0070683_100122633
310 Ga0070683_100272442
311 Ga0070683_100414609
312 Ga0070680_100001541
313 Ga0070680_100009788
314 Ga0070680_100057282
315 Ga0070682_100463676
316 Ga0070660_100071884
317 Ga0070691_10005697
318 Ga0070691_10044659
319 Ga0070661_100024543
320 Ga0070661_100025016
321 Ga0070661_100138846
322 Ga0070692_10000765
323 Ga0070692_10014679
324 Ga0070692_10047164
325 Ga0070692_10062072
326 Ga0070659_100055453
327 Ga0070659_100187589
328 Ga0070714_100291970
329 Ga0070713_100330543
330 Ga0070663_100003411
331 Ga0070663_100027179
332 Ga0070662_100049765
333 Ga0070681_10000088
334 Ga0070681_10004756
335 Ga0070681_10013670
336 Ga0070681_10021288
337 Ga0070681_10208221
338 Ga0070706_100022917
339 Ga0070699_100313215
340 Ga0070679_100000061
341 Ga0070679_100001245
342 Ga0070679_100016404
343 Ga0070679_100038842
344 Ga0070684_100064168
345 Ga0068853_100127673
346 Ga0068853_100200492
347 Ga0070696_100050048
348 Ga0070696_100070962
349 Ga0070696_100132198
350 Ga0068855_100003760
351 Ga0070664_100079455
352 Ga0068857_100100084
353 Ga0068857_100129282
354 Ga0068857_100184138
355 Ga0068854_100051152
356 Ga0068854_100198974
357 Ga0068856_100060283
358 Ga0068856_100119432
359 Ga0068856_100373347
360 Ga0068852_100018633
361 Ga0068852_100046284
362 Ga0068859_100462268
363 Ga0068851_10059637
364 Ga0068862_100043204
365 Ga0081538_10006698
366 Ga0081538_10024114
367 Ga0081539_10040680
368 Ga0070715_10003003
369 Ga0070712_100043355
370 Ga0097620_100462206
371 Ga0105240_10370081
372 Ga0105241_10169179
373 Ga0105242_10035371
374 Ga0105238_10001155
375 Ga0105238_10003317
376 Ga0105028_100493
377 Ga0157373_10013266
378 Ga0157373_10089650
379 Ga0157371_10008138
380 Ga0157371_10096499
381 Ga0157370_10004826
382 Ga0157370_10017745
383 Ga0157369_10020128
384 Ga0157369_10057299
385 Ga0157369_10334121
386 Ga0163162_10751697
387 Ga0157372_10022903
388 Ga0157372_10067762
389 Ga0157372_10185222
390 Ga0206356_10180828
391 Ga0206356_10925594
392 Ga0206356_10939095
393 Ga0206354_10583945
394 Ga0206353_11352825
395 Ga0206353_11399092
396 Ga0206353_11688311
397 Ga0209676_1012937
398 Ga0209758_1000136
399 Ga0209758_1013770
400 Ga0209050_1006328
401 Ga0209257_1000496
402 Ga0209257_1019401
403 Ga0207656_10016101
404 Ga0207647_10002440
405 Ga0207647_10009829
406 Ga0207685_10010605
407 Ga0207705_10000029
408 Ga0207705_10005193
409 Ga0207705_10008096
410 Ga0207705_10010039
411 Ga0207705_10130827
412 Ga0207684_10168591
413 Ga0207707_10000042
414 Ga0207707_10000144
415 Ga0207707_10000599
416 Ga0207707_10006660
417 Ga0207707_10011472
418 Ga0207707_10050310
419 Ga0207707_10151905
420 Ga0207695_10006715
421 Ga0207695_10010262
422 Ga0207695_10024525
423 Ga0207660_10000368
424 Ga0207660_10002186
425 Ga0207660_10005600
426 Ga0207660_10006347
427 Ga0207660_10007337
428 Ga0207660_10012464
429 Ga0207660_10022149
430 Ga0207657_10034120
431 Ga0207657_10081078
432 Ga0207649_10000543
433 Ga0207649_10017498
434 Ga0207649_10030045
435 Ga0207649_10083781
436 Ga0207652_10000082
437 Ga0207652_10000099
438 Ga0207652_10006102
439 Ga0207652_10008093
440 Ga0207652_10009940
441 Ga0207652_10014087
442 Ga0207652_10391964
443 Ga0207694_10028080
444 Ga0207700_10275416
445 Ga0207664_10375384
446 Ga0207690_10000096
447 Ga0207690_10007040
448 Ga0207690_10060229
449 Ga0207690_10165715
450 Ga0207706_10029731
451 Ga0207661_10003797
452 Ga0207661_10055892
453 Ga0207661_10425464
454 Ga0207679_10131905
455 Ga0207667_10000075
456 Ga0207667_10006240
457 Ga0207667_10023645
458 Ga0207667_10052909
459 Ga0207640_10001753
460 Ga0207640_10002006
461 Ga0207640_10005100
462 Ga0207640_10005611
463 Ga0207640_10023980
464 Ga0207639_10000540
465 Ga0207639_10016100
466 Ga0207639_10073766
467 Ga0207678_10006806
468 Ga0207678_10026702
469 Ga0207678_10042842
470 Ga0207702_10005769
471 Ga0207702_10033320
472 Ga0207702_10071627
473 Ga0207674_10029374
474 Ga0207674_10036490
475 Ga0207674_10184219
476 Ga0207698_10001070
477 Ga0207698_10006699
478 Ga0207698_10012838
479 Ga0207698_10117932
480 Ga0268265_10015806
481 Ga0268264_10068003
482 Ga0307515_10143883
483 Ga0265328_10003496
484 Ga0265331_10000012
485 Ga0265327_10000206
486 Ga0265316_10079223
487 Ga0265316_10154859
488 Ga0307513_10074461
489 Ga0307513_10098300
490 Ga0316576_10144264
491 Ga0316578_10020262
492 Ga0316578_10083633
493 Ga0307407_10038691
494 Ga0307416_100521221
495 Ga0373935_0145659
496 Ga0373927_0388185
497 Ga0373947_0012725
498 Ga0373937_0019518
499 Ga0316584_0010001
500 Ga0373925_0258062
501 Ga0373925_0349040
502 Ga0395900_0024547
503 Ga0395900_0140036
504 Ga0395900_0227732
505 Ga0395898_0083726
506 Ga0395898_0268445
507 Ga0436364_0477878
508 Ga0436364_1215387
509 Ga0395901_0040785
510 Ga0395901_0158137
511 Ga0395901_0186995
512 Ga0395901_0203271
513 Ga0400483_003798
514 Ga0400483_096361
515 Ga0400483_112664
516 Ga0400483_268269
517 Ga0436365_1125111
518 Ga0436361_1163644
519 Ga0436363_0463920
520 Ga0439453_0002141
521 Ga0466960_0189720
522 Ga0495580_0107671
523 Ga0496101_0059189
524 Ga0496102_0053097
525 Ga0496102_0118703
526 Ga0496104_0065164
527 Ga0496109_0021308
528 Ga0496110_0024061
529 Ga0496111_0052255
530 Ga0496113_0111623
531 Ga0496114_0024288
532 Ga0496115_0177249
533 Ga0501036_0158632
534 Ga0501036_0283574
535 Ga0501037_0001353
536 Ga0501037_0043377
537 Ga0501037_0286428
538 Ga0501038_0187159
539 Ga0501039_0035726
540 Ga0501040_0157800
541 Ga0501042_0032398
542 Ga0501046_0061811
543 Ga0501047_0000722
544 Ga0501047_0025494
545 Ga0501067_0140472
546 Ga0501068_0009102
547 Ga0501069_0012420
548 Ga0501069_0061657
549 Ga0501070_0018829
550 Ga0501070_0040334
551 Ga0501070_0107602
552 Ga0501070_0329035
553 Ga0501072_0036131
554 Ga0501072_0074536
555 Ga0501073_0030291
556 Ga0501073_0058656
557 Ga0501073_0077438
558 Ga0501073_0109363
559 Ga0501073_0136313
560 Ga0501074_0003496
561 Ga0501076_0108633
562 Ga0501077_0082208
563 Ga0501079_0120080
564 Ga0501079_0324392
565 Ga0501080_0000480
566 Ga0501080_0013083
567 Ga0501080_0037810
568 Ga0501080_0067760
569 Ga0501080_0109988
570 Ga0501080_0118033
571 Ga0501081_0355392
572 Ga0501083_0004129
573 Ga0501083_0010176
574 Ga0501083_0017298
575 Ga0501083_0057920
576 Ga0501035_0154090
577 Ga0501044_0005471
578 Ga0501044_0015978
579 Ga0501044_0026939
580 Ga0501044_0145187
581 Ga0501045_0151876
582 Ga0501045_0372668
583 Ga0500578_0071955
584 Ga0500644_0069929
585 Ga0500651_0148772
586 Ga0500641_0008525
587 Ga0500555_002770
588 Ga0500594_0011788
589 Ga0500595_000384
590 Ga0500642_0000997
591 Ga0500655_011432
592 Ga0500658_0019778
593 Ga0500588_0000860
594 Ga0500604_0001201
595 Ga0500604_0006085
596 Ga0500616_0001742
597 Ga0500616_0067219
598 Ga0500609_000075
599 Ga0500609_014668
600 Ga0501082_0001220
601 Ga0501082_0007552
602 Ga0501082_0034867
603 Ga0530510_0057385
604 2937846536

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00850

Hist_deacetyl

Histone deacetylase domain

66

352

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ji5-assembly1.cif.gz_A crystal structure of a histone deacetylase superfamily protein from burkholderia phymatumphymatum 0.981 2 305
5g1a-assembly1.cif.gz_B bordetella alcaligenes hdah bound to pfsaha 0.9718 1 303
5g17-assembly1.cif.gz_B bordetella alcaligenes hdah (t101a) bound to 9,9,9-trifluoro-8,8- dihydroxy-n-phenylnonanamide. 0.9703 1 303
5g1a-assembly1.cif.gz_A-2 bordetella alcaligenes hdah bound to pfsaha 0.9695 1 303
8szt-assembly1.cif.gz_A structure of kdac1 from acinetobacter baumannii 0.9656 1 303
ID Description Score Start End Superfamily
af_A0A1D6N7T5_1_214_3.40.800.20 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Histone deacetylase domain 0.9816 130 304 3.40.800.20
5ji5A00 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Histone deacetylase domain 0.981 2 305 3.40.800.20
5g1cA00 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Histone deacetylase domain 0.9699 1 303 3.40.800.20
5g1cA00 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Histone deacetylase domain 0.9606 1 303 3.40.800.20
5li3A00 Alpha Beta;3-Layer(aba) Sandwich;Arginase; Chain A;Histone deacetylase domain 0.957 2 303 3.40.800.20
ID Description Score Start End GO Terms
AF-A0A7X3W268-F1-model_v4 deleted 1 178 304
AF-A0A502CDR9-F1-model_v4 Histone deacetylase family protein 0.9993 2 305 GO:0004407
GO:0040029
AF-A0A527ZVN2-F1-model_v4 Histone deacetylase family protein 0.9993 158 305 GO:0004407
GO:0040029
AF-A0A2W5JN69-F1-model_v4 deleted 0.9986 159 305
AF-A0A832ALN7-F1-model_v4 Histone deacetylase family protein 0.9983 139 304 GO:0004407
GO:0040029

Map