F396455

General Info

Members Datasets Scaffolds Average Seq Length
302 222 604 484

Family's Representative Sequence

Representative Sequence 3300009098|Ga0105245_10130763|Ga0105245_101307631
Length 509
Sequence VDARHKAGHDESVESIMRRLFRIIRNILLLAVAAIVIVAGVLAFNTLTHGSRQLQAAAVPRAPVDMQAAATRLGEAIRFRTISSYEKPDQHAEALQGMQAHIENSFPAFHAAARRELVAQYSLLYTWEGSDPKAAPIALLAHQDVVPVAPGTERDWQQPPYDGVIADGFIWGRGAWDDKGNLYSVLEAAEVMVKAGFRPRRTIYFAFGHDEETAGTAGAKSIAALLASRGVRLDFVIDEGLLITEGILKGLDKPAALIGTAEKGYATLVLNARAVPGHSSMPPRDTAIGMMSTALARLEDHRLPMQIRSTVAEMFDTLAPEMTGLNRVVLSNRWLFKPLLLREFEKSGPTEAMVRTTTALTIFNAGDKDNVLPGNAEASVNFRLIPGDTQGSVTDHVRNTIANERISIKPFPGNTDPPPVTSTASPSFQMLNRTIREVFPDVIVAPGLMVGATDSRHYMEITDKIFRFSPVRANSDDLKRFHGTNERISVEGYADMIRFYRRLIENSAG

Samples

Sample ID Description Type Environment
1 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
2 3300002987 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mLB Metagenome Endosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
5 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
6 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
9 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
14 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
26 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
29 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
30 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
31 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
32 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
33 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
34 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
35 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
36 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
37 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
38 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
39 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
40 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
41 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
42 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
43 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
46 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
47 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
52 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
53 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
54 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
58 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
59 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
60 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
61 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
62 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
85 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
86 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
89 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
90 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
91 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
92 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
93 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
94 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
95 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
96 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
97 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
98 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
99 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
100 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
101 3300035120 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_5 Metagenome Rhizosphere
102 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
103 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
104 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
105 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
106 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
107 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
108 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
109 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
110 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
111 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
112 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
113 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
114 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
115 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
116 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
117 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
118 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
119 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
120 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
121 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
122 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
123 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
124 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
125 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
126 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
127 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
128 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
129 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
130 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
131 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
132 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
133 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
134 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
135 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
136 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
137 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
138 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
139 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
140 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
141 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
142 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
143 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
144 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
145 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
146 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
147 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
148 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
149 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
150 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
151 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
152 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
153 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
154 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
155 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
156 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
157 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
158 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
159 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
160 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
161 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
162 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
163 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
164 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
165 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
166 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
167 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
168 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
169 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
170 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
171 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
172 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
173 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
175 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
176 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
177 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
178 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
179 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
180 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
181 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
182 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
183 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
184 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
185 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
186 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
187 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
188 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
189 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
190 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
191 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
192 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
193 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
194 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
195 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
196 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
197 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
198 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
199 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
200 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
201 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
202 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
203 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
204 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
205 2513237104 Bradyrhizobium sp. EC3.3 Isolate Nodule
206 2524023210 Bradyrhizobium sp. Ai1a-2 Isolate Nodule
207 2602042107 Bradyrhizobium sp. NFR13 Isolate Rhizoplane
208 2643221651 Afipia sp. Root123D2 Isolate Unclassified
209 2791355199
210 2857524615 Tardiphaga sp. R-73074 Isolate Unclassified
211 2876808645 Bradyrhizobium algeriense RST89 Isolate Unclassified
212 2879110137 Bradyrhizobium algeriense RST91 Isolate Nodule
213 2885383462 Bradyrhizobium sp. Leo170 Isolate Unclassified
214 2885409591 Bradyrhizobium sp. NAS80.1 Isolate Unclassified
215 2889033259 Bradyrhizobium sp. CCBAU 051011 Isolate Unclassified
216 2893066018 Tardiphaga sp. P9-11 Isolate Unclassified
217 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
218 2919073203 Tardiphaga robiniae 1155 Isolate Unclassified
219 3005710791 Bradyrhizobium genosp. B BDV5040 Isolate Unclassified
220 8006926726 Bradyrhizobium guangdongense SM32 Isolate Unclassified
221 8006984368 Bradyrhizobium sp. SRL28 Isolate Unclassified
222 8056681323 Bradyrhizobium cenepequi CNPSo 4026 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.02
Metatranscriptomes 0
Isolates 5.98

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 14.24
Nodule 1.66
Rhizoplane 2.32
Rhizosphere 65.56
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0105245_10130763 3300009098 Bacteria 2354
2 JGI25159J45721_1001190 3300002987 Bacteria 11118
3 JGI25406J46586_10000084 3300003203 Bacteria 42873
4 JGI25406J46586_10013073 3300003203 Bacteria 3582
5 JGI25153J46596_10001938 3300003215 Bacteria 12285
6 Ga0055526_1012289 3300003771 Bacteria 3752
7 Ga0070676_10001353 3300005328 Bacteria 12331
8 Ga0068869_100010030 3300005334 Bacteria 6159
9 Ga0068869_100159982 3300005334 Bacteria 1752
10 Ga0068868_100021260 3300005338 Bacteria 4887
11 Ga0070689_100034896 3300005340 Bacteria 3839
12 Ga0070668_100046019 3300005347 Bacteria 3349
13 Ga0070668_100051792 3300005347 Bacteria 3164
14 Ga0070675_100027472 3300005354 Bacteria 4571
15 Ga0070673_100006271 3300005364 Bacteria 7713
16 Ga0070673_100049686 3300005364 Bacteria 3276
17 Ga0070673_100211557 3300005364 Bacteria 1675
18 Ga0070667_100125800 3300005367 Bacteria 2234
19 Ga0070663_100075238 3300005455 Bacteria 2467
20 Ga0070663_100111695 3300005455 Bacteria 2054
21 Ga0070678_100025297 3300005456 Bacteria 3991
22 Ga0070678_100073004 3300005456 Bacteria 2574
23 Ga0070662_100134606 3300005457 Bacteria 1909
24 Ga0068867_100001306 3300005459 Bacteria 17230
25 Ga0070706_100011054 3300005467 Bacteria 8381
26 Ga0070698_100109536 3300005471 Bacteria 2728
27 Ga0070679_100050656 3300005530 Bacteria 4136
28 Ga0068853_100035946 3300005539 Bacteria 4210
29 Ga0070672_100054794 3300005543 Bacteria 3123
30 Ga0070696_100061626 3300005546 Bacteria 2624
31 Ga0070665_100246545 3300005548 Bacteria 1787
32 Ga0068855_100059558 3300005563 Bacteria 4467
33 Ga0068852_100176770 3300005616 Bacteria 2005
34 Ga0068859_100071040 3300005617 Bacteria 3517
35 Ga0068861_100036887 3300005719 Bacteria 3631
36 Ga0068860_100089806 3300005843 Bacteria 2926
37 Ga0068862_100039735 3300005844 Bacteria 3997
38 Ga0068862_100050711 3300005844 Bacteria 3547
39 Ga0068862_100093065 3300005844 Bacteria 2628
40 Ga0081455_10003799 3300005937 Bacteria 17228
41 Ga0081455_10011795 3300005937 Bacteria 8752
42 Ga0081455_10094827 3300005937 Bacteria 2410
43 Ga0081540_1004206 3300005983 Bacteria 11062
44 Ga0081540_1004823 3300005983 Bacteria 10158
45 Ga0081540_1017909 3300005983 Bacteria 4366
46 Ga0081540_1030667 3300005983 Bacteria 2974
47 Ga0081539_10000265 3300005985 Bacteria 120457
48 Ga0081539_10000966 3300005985 Bacteria 53690
49 Ga0075365_10008901 3300006038 Bacteria 5730
50 Ga0075368_10010605 3300006042 Bacteria 3335
51 Ga0075363_100034016 3300006048 Bacteria 2659
52 Ga0075363_100063810 3300006048 Bacteria 1989
53 Ga0075362_10034614 3300006177 Bacteria 2203
54 Ga0075369_10010827 3300006186 Bacteria 3573
55 Ga0075369_10018054 3300006186 Bacteria 2868
56 Ga0075366_10047587 3300006195 Bacteria 2542
57 Ga0075370_10002071 3300006353 Bacteria 9132
58 Ga0075370_10004326 3300006353 Bacteria 6884
59 Ga0075428_100063890 3300006844 Bacteria 4030
60 Ga0075430_100023713 3300006846 Bacteria 5225
61 Ga0075434_100174453 3300006871 Bacteria 2169
62 Ga0075429_100001809 3300006880 Bacteria 17713
63 Ga0068865_100031348 3300006881 Bacteria 3544
64 Ga0075436_100023631 3300006914 Bacteria 4222
65 Ga0097620_100071034 3300006931 Bacteria 3517
66 Ga0105240_10022886 3300009093 Bacteria 8278
67 Ga0105240_10099295 3300009093 Bacteria 3543
68 Ga0105245_10053010 3300009098 Bacteria 3640
69 Ga0105245_10092773 3300009098 Bacteria 2781
70 Ga0105245_10119411 3300009098 Bacteria 2461
71 Ga0105241_10060625 3300009174 Bacteria 2911
72 Ga0105241_10112172 3300009174 Bacteria 2184
73 Ga0105248_10038164 3300009177 Bacteria 5375
74 Ga0105248_10167564 3300009177 Bacteria 2476
75 Ga0105237_10039601 3300009545 Bacteria 4758
76 Ga0105237_10093519 3300009545 Bacteria 2996
77 Ga0105239_10027149 3300010375 Bacteria 6303
78 Ga0105239_10095135 3300010375 Bacteria 3291
79 Ga0105239_10138978 3300010375 Bacteria 2706
80 Ga0105246_10039142 3300011119 Bacteria 3192
81 Ga0157378_10145664 3300013297 Bacteria 2203
82 Ga0157375_10099630 3300013308 Bacteria 2985
83 Ga0157380_10067360 3300014326 Bacteria 2883
84 Ga0157377_10093229 3300014745 Bacteria 1782
85 Ga0157379_10067425 3300014968 Bacteria 3199
86 Ga0157376_10061381 3300014969 Bacteria 3160
87 Ga0209564_1000904 3300025295 Bacteria 38851
88 Ga0209564_1007020 3300025295 Bacteria 5905
89 Ga0209758_1010562 3300025297 Bacteria 5505
90 Ga0209758_1032125 3300025297 Bacteria 2138
91 Ga0207645_10043635 3300025907 Bacteria 2870
92 Ga0207684_10011340 3300025910 Bacteria 7802
93 Ga0207654_10045615 3300025911 Bacteria 2495
94 Ga0207695_10000148 3300025913 Bacteria 208344
95 Ga0207695_10014243 3300025913 Bacteria 9432
96 Ga0207671_10005965 3300025914 Bacteria 11041
97 Ga0207671_10021260 3300025914 Bacteria 4926
98 Ga0207671_10142228 3300025914 Bacteria 1849
99 Ga0207657_10015547 3300025919 Bacteria 7369
100 Ga0207659_10016786 3300025926 Bacteria 4772
101 Ga0207687_10020799 3300025927 Bacteria 4354
102 Ga0207700_10143392 3300025928 Bacteria 1965
103 Ga0207706_10166105 3300025933 Bacteria 1940
104 Ga0207670_10023121 3300025936 Bacteria 3864
105 Ga0207669_10153775 3300025937 Bacteria 1615
106 Ga0207691_10024973 3300025940 Bacteria 5615
107 Ga0207691_10114434 3300025940 Bacteria 2397
108 Ga0207711_10102699 3300025941 Bacteria 2531
109 Ga0207689_10097461 3300025942 Bacteria 2415
110 Ga0207689_10162104 3300025942 Bacteria 1842
111 Ga0207651_10012735 3300025960 Bacteria 4776
112 Ga0207712_10082923 3300025961 Bacteria 2339
113 Ga0207703_10163182 3300026035 Bacteria 1953
114 Ga0207678_10044346 3300026067 Bacteria 3847
115 Ga0207678_10069565 3300026067 Bacteria 3018
116 Ga0207678_10112464 3300026067 Bacteria 2323
117 Ga0207678_10154442 3300026067 Bacteria 1960
118 Ga0207648_10118146 3300026089 Bacteria 2330
119 Ga0207675_100048673 3300026118 Bacteria 3956
120 Ga0207675_100099416 3300026118 Bacteria 2740
121 Ga0207683_10059271 3300026121 Bacteria 3363
122 Ga0207683_10080952 3300026121 Bacteria 2882
123 Ga0207683_10136554 3300026121 Bacteria 2208
124 Ga0209813_10028220 3300027866 Bacteria 1636
125 Ga0207428_10023014 3300027907 Bacteria 5247
126 Ga0268266_10002169 3300028379 Bacteria 21507
127 Ga0268265_10075994 3300028380 Bacteria 2633
128 Ga0307517_10000175 3300028786 Bacteria 105567
129 Ga0307517_10050732 3300028786 Bacteria 4209
130 Ga0307515_10070961 3300028794 Bacteria 4729
131 Ga0307515_10118660 3300028794 Bacteria 3017
132 Ga0307512_10022787 3300030522 Bacteria 5615
133 Ga0265332_10030707 3300031238 Bacteria 2346
134 Ga0265339_10000427 3300031249 Bacteria 33315
135 Ga0265331_10003992 3300031250 Bacteria 9325
136 Ga0307509_10003739 3300031507 Bacteria 22680
137 Ga0307509_10224230 3300031507 Bacteria 1689
138 Ga0265313_10043225 3300031595 Bacteria 2207
139 Ga0265314_10000414 3300031711 Bacteria 57450
140 Ga0307516_10225658 3300031730 Bacteria 1580
141 Ga0307415_100141278 3300032126 Bacteria 1839
142 Ga0307510_10109051 3300033180 Bacteria 2519
143 Ga0373953_0002619 3300035117 Bacteria 5444
144 Ga0373957_0003211 3300035120 Bacteria 4801
145 Ga0373955_0000829 3300035172 Bacteria 13241
146 Ga0373924_0007895 3300035410 Bacteria 3850
147 Ga0373937_0012973 3300036401 Bacteria 7339
148 Ga0395900_0005151 3300037418 Bacteria 13732
149 Ga0395898_0003493 3300037466 Bacteria 17565
150 Ga0395905_0046213 3300037471 Bacteria 4083
151 Ga0395905_0060920 3300037471 Bacteria 3529
152 Ga0395901_0043590 3300038443 Bacteria 4653
153 Ga0436361_0410029 3300039447 Bacteria 3306
154 Ga0453684_0016205 3300044712 Bacteria 11676
155 Ga0453684_0031870 3300044712 Bacteria 7393
156 Ga0495592_0002648 3300046454 Bacteria 12661
157 Ga0495603_0039327 3300046455 Bacteria 2834
158 Ga0495629_0010733 3300046459 Bacteria 6663
159 Ga0495638_0025961 3300046460 Bacteria 3803
160 Ga0495638_0036163 3300046460 Bacteria 3146
161 Ga0495638_0036455 3300046460 Bacteria 3133
162 Ga0495653_0019469 3300046463 Bacteria 5504
163 Ga0495580_0050659 3300046472 Bacteria 2936
164 Ga0495605_0052743 3300046474 Bacteria 1975
165 Ga0495584_0009033 3300046491 Bacteria 5148
166 Ga0495585_0080826 3300046492 Bacteria 1761
167 Ga0495607_0014833 3300046501 Bacteria 5064
168 Ga0495583_0016678 3300046506 Bacteria 3936
169 Ga0495606_0001875 3300046507 Bacteria 26343
170 Ga0495606_0032527 3300046507 Bacteria 3612
171 Ga0495608_0002322 3300046511 Bacteria 13726
172 Ga0495616_0038516 3300046513 Bacteria 2454
173 Ga0495616_0060004 3300046513 Bacteria 1869
174 Ga0495620_0013927 3300046515 Bacteria 4104
175 Ga0495628_0011132 3300046516 Bacteria 7615
176 Ga0495631_0061595 3300046518 Bacteria 1627
177 Ga0495648_0006938 3300046524 Bacteria 9133
178 Ga0495648_0084926 3300046524 Bacteria 1790
179 Ga0495642_0086252 3300046528 Bacteria 1326
180 Ga0495652_0007767 3300046529 Bacteria 9858
181 Ga0495654_0029894 3300046530 Bacteria 2776
182 Ga0495640_0011681 3300046533 Bacteria 6743
183 Ga0495609_0002146 3300046538 Bacteria 12411
184 Ga0495645_0024043 3300046543 Bacteria 4417
185 Ga0495667_0000528 3300046559 Bacteria 24459
186 Ga0495656_0002383 3300046615 Bacteria 6229
187 Ga0495656_0017675 3300046615 Bacteria 2724
188 Ga0495634_0012565 3300046642 Bacteria 6129
189 Ga0495625_0009300 3300046660 Bacteria 8236
190 Ga0495625_0033179 3300046660 Bacteria 3820
191 Ga0495625_0106336 3300046660 Bacteria 1922
192 Ga0495635_0008549 3300046663 Bacteria 7149
193 Ga0495659_0000741 3300046664 Bacteria 11717
194 Ga0495659_0007392 3300046664 Bacteria 3486
195 Ga0495661_0005736 3300046665 Bacteria 8791
196 Ga0495661_0027061 3300046665 Bacteria 3685
197 Ga0495657_0003636 3300046675 Bacteria 12519
198 Ga0495599_0023691 3300046678 Bacteria 3837
199 Ga0495646_0004101 3300046680 Bacteria 9142
200 Ga0495669_0018430 3300046684 Bacteria 3002
201 Ga0495613_0063500 3300046689 Bacteria 2702
202 Ga0495670_0003272 3300046691 Bacteria 7978
203 Ga0495670_0012052 3300046691 Bacteria 4254
204 Ga0495671_0041414 3300046692 Bacteria 2319
205 Ga0495649_0007278 3300046694 Bacteria 6772
206 Ga0495600_0001951 3300046809 Bacteria 11586
207 Ga0495687_037322 3300047443 Bacteria 2165
208 Ga0495684_0000457 3300047471 Bacteria 33378
209 Ga0495593_0003312 3300047673 Bacteria 9649
210 Ga0495626_0034627 3300048091 Bacteria 2415
211 Ga0496100_0118304 3300048903 Bacteria 1851
212 Ga0496106_0091705 3300048909 Bacteria 2346
213 Ga0496107_0128183 3300048910 Bacteria 1872
214 Ga0496112_0000035 3300048915 Bacteria 106983
215 Ga0496112_0095365 3300048915 Bacteria 2945
216 Ga0496114_0088048 3300048917 Bacteria 2634
217 Ga0496116_0002501 3300048919 Bacteria 19243
218 Ga0496117_0030222 3300048920 Bacteria 4160
219 Ga0496118_0044041 3300048921 Bacteria 3498
220 Ga0496118_0104591 3300048921 Bacteria 1900
221 Ga0496118_0105971 3300048921 Bacteria 1882
222 Ga0496118_0112520 3300048921 Bacteria 1802
223 Ga0496119_0075187 3300048922 Bacteria 1964
224 Ga0496120_0021783 3300048923 Bacteria 4042
225 Ga0496120_0096649 3300048923 Bacteria 1568
226 Ga0496121_0003211 3300048924 Bacteria 23523
227 Ga0496121_0009082 3300048924 Bacteria 11508
228 Ga0496121_0031206 3300048924 Bacteria 4873
229 Ga0496121_0039220 3300048924 Bacteria 4179
230 Ga0496121_0046169 3300048924 Bacteria 3731
231 Ga0496122_0080137 3300048925 Bacteria 2278
232 Ga0496122_0094620 3300048925 Bacteria 2022
233 Ga0496123_0050867 3300048926 Bacteria 2765
234 Ga0496123_0063454 3300048926 Bacteria 2360
235 Ga0496124_0105066 3300048927 Bacteria 2282
236 Ga0496124_0125643 3300048927 Bacteria 2044
237 Ga0496125_0000406 3300048928 Bacteria 80645
238 Ga0496125_0000516 3300048928 Bacteria 67232
239 Ga0496125_0009348 3300048928 Bacteria 10099
240 Ga0496125_0016585 3300048928 Bacteria 7065
241 Ga0496126_0030950 3300048929 Bacteria 5062
242 Ga0496126_0041930 3300048929 Bacteria 4231
243 Ga0496126_0154203 3300048929 Bacteria 1967
244 Ga0501043_0050025 3300049579 Bacteria 3285
245 Ga0501046_0107530 3300049580 Bacteria 2134
246 Ga0501047_0011864 3300049581 Bacteria 8242
247 Ga0501047_0023320 3300049581 Bacteria 5943
248 Ga0501067_0080356 3300049583 Bacteria 1807
249 Ga0501035_0126583 3300049822 Bacteria 2230
250 Ga0501044_0063783 3300049823 Bacteria 3762
251 Ga0501044_0092321 3300049823 Bacteria 3053
252 nmdc:mga03n38_15900_c1 3300050490 Bacteria 2916
253 nmdc:mga0yw44_17795_c1 3300050492 Bacteria 3877
254 nmdc:mga04h51_8061_c1 3300050495 Bacteria 2806
255 nmdc:mga07m45_9479_c1 3300050496 Bacteria 5053
256 nmdc:mga0qj67_45682_c1 3300050509 Bacteria 3456
257 nmdc:mga08y16_131602_c1 3300050511 Bacteria 2601
258 nmdc:mga0n895_149136_c1 3300050512 Bacteria 2368
259 nmdc:mga08x19_41068_c1 3300050514 Bacteria 2946
260 nmdc:mga0sz30_20387_c1 3300050516 Bacteria 2674
261 Ga0495595_0002700 3300053084 Bacteria 6953
262 Ga0495595_0027969 3300053084 Bacteria 2515
263 Ga0495619_0012692 3300053085 Bacteria 5303
264 Ga0500583_0071335 3300053092 Bacteria 1661
265 Ga0500651_0002919 3300053093 Bacteria 9190
266 Ga0500566_0015288 3300053094 Bacteria 4503
267 Ga0500650_0001225 3300053098 Bacteria 7552
268 Ga0500554_010387 3300053102 Bacteria 2267
269 Ga0500556_0000016 3300053104 Bacteria 194958
270 Ga0500595_000631 3300053119 Bacteria 21077
271 Ga0500595_005028 3300053119 Bacteria 5816
272 Ga0500608_000117 3300053122 Bacteria 32871
273 Ga0500642_0000261 3300053130 Bacteria 19727
274 Ga0500652_000225 3300053131 Bacteria 21717
275 Ga0500559_0000017 3300053136 Bacteria 143646
276 Ga0500559_0000161 3300053136 Bacteria 53055
277 Ga0500568_0002573 3300053139 Bacteria 10565
278 Ga0500568_0025513 3300053139 Bacteria 2493
279 Ga0500616_0000169 3300053153 Bacteria 109205
280 Ga0500622_0018451 3300053156 Bacteria 3709
281 Ga0500627_0008586 3300053158 Bacteria 3639
282 Ga0500636_0002058 3300053177 Bacteria 11095
283 Ga0500636_0017264 3300053177 Bacteria 4260
284 2513675060 2513237098 Bacteria 9902361
285 2513718144 2513237104 Bacteria 10034502
286 2524466954 2524023210 Bacteria 9029266
287 2603858283 2602042107 Bacteria 6226103
288 2644291005 2643221651 Bacteria 4798932
289 2793080846
290 2857527703 2857524615 Bacteria 6615449
291 2876808981 2876808645 Bacteria 8824342
292 2879113419 2879110137 Bacteria 8907982
293 2885390395 2885383462 Bacteria 9473874
294 2885414135 2885409591 Bacteria 9235467
295 2889035405 2889033259 Bacteria 9099371
296 2893067134 2893066018 Bacteria 6158120
297 2903773163 2903768456 Bacteria 9749579
298 2919073564 2919073203 Bacteria 6531949
299 3005711078 3005710791 Bacteria 7622528
300 8006933286 8006926726 Bacteria 6749210
301 8006991002 8006984368 Bacteria 9651211
302 8056687157 8056681323 Bacteria 8472857
303 Ga0105245_10130763
304 JGI25159J45721_1001190
305 JGI25406J46586_10000084
306 JGI25406J46586_10013073
307 JGI25153J46596_10001938
308 Ga0055526_1012289
309 Ga0070676_10001353
310 Ga0068869_100010030
311 Ga0068869_100159982
312 Ga0068868_100021260
313 Ga0070689_100034896
314 Ga0070668_100046019
315 Ga0070668_100051792
316 Ga0070675_100027472
317 Ga0070673_100006271
318 Ga0070673_100049686
319 Ga0070673_100211557
320 Ga0070667_100125800
321 Ga0070663_100075238
322 Ga0070663_100111695
323 Ga0070678_100025297
324 Ga0070678_100073004
325 Ga0070662_100134606
326 Ga0068867_100001306
327 Ga0070706_100011054
328 Ga0070698_100109536
329 Ga0070679_100050656
330 Ga0068853_100035946
331 Ga0070672_100054794
332 Ga0070696_100061626
333 Ga0070665_100246545
334 Ga0068855_100059558
335 Ga0068852_100176770
336 Ga0068859_100071040
337 Ga0068861_100036887
338 Ga0068860_100089806
339 Ga0068862_100039735
340 Ga0068862_100050711
341 Ga0068862_100093065
342 Ga0081455_10003799
343 Ga0081455_10011795
344 Ga0081455_10094827
345 Ga0081540_1004206
346 Ga0081540_1004823
347 Ga0081540_1017909
348 Ga0081540_1030667
349 Ga0081539_10000265
350 Ga0081539_10000966
351 Ga0075365_10008901
352 Ga0075368_10010605
353 Ga0075363_100034016
354 Ga0075363_100063810
355 Ga0075362_10034614
356 Ga0075369_10010827
357 Ga0075369_10018054
358 Ga0075366_10047587
359 Ga0075370_10002071
360 Ga0075370_10004326
361 Ga0075428_100063890
362 Ga0075430_100023713
363 Ga0075434_100174453
364 Ga0075429_100001809
365 Ga0068865_100031348
366 Ga0075436_100023631
367 Ga0097620_100071034
368 Ga0105240_10022886
369 Ga0105240_10099295
370 Ga0105245_10053010
371 Ga0105245_10092773
372 Ga0105245_10119411
373 Ga0105241_10060625
374 Ga0105241_10112172
375 Ga0105248_10038164
376 Ga0105248_10167564
377 Ga0105237_10039601
378 Ga0105237_10093519
379 Ga0105239_10027149
380 Ga0105239_10095135
381 Ga0105239_10138978
382 Ga0105246_10039142
383 Ga0157378_10145664
384 Ga0157375_10099630
385 Ga0157380_10067360
386 Ga0157377_10093229
387 Ga0157379_10067425
388 Ga0157376_10061381
389 Ga0209564_1000904
390 Ga0209564_1007020
391 Ga0209758_1010562
392 Ga0209758_1032125
393 Ga0207645_10043635
394 Ga0207684_10011340
395 Ga0207654_10045615
396 Ga0207695_10000148
397 Ga0207695_10014243
398 Ga0207671_10005965
399 Ga0207671_10021260
400 Ga0207671_10142228
401 Ga0207657_10015547
402 Ga0207659_10016786
403 Ga0207687_10020799
404 Ga0207700_10143392
405 Ga0207706_10166105
406 Ga0207670_10023121
407 Ga0207669_10153775
408 Ga0207691_10024973
409 Ga0207691_10114434
410 Ga0207711_10102699
411 Ga0207689_10097461
412 Ga0207689_10162104
413 Ga0207651_10012735
414 Ga0207712_10082923
415 Ga0207703_10163182
416 Ga0207678_10044346
417 Ga0207678_10069565
418 Ga0207678_10112464
419 Ga0207678_10154442
420 Ga0207648_10118146
421 Ga0207675_100048673
422 Ga0207675_100099416
423 Ga0207683_10059271
424 Ga0207683_10080952
425 Ga0207683_10136554
426 Ga0209813_10028220
427 Ga0207428_10023014
428 Ga0268266_10002169
429 Ga0268265_10075994
430 Ga0307517_10000175
431 Ga0307517_10050732
432 Ga0307515_10070961
433 Ga0307515_10118660
434 Ga0307512_10022787
435 Ga0265332_10030707
436 Ga0265339_10000427
437 Ga0265331_10003992
438 Ga0307509_10003739
439 Ga0307509_10224230
440 Ga0265313_10043225
441 Ga0265314_10000414
442 Ga0307516_10225658
443 Ga0307415_100141278
444 Ga0307510_10109051
445 Ga0373953_0002619
446 Ga0373957_0003211
447 Ga0373955_0000829
448 Ga0373924_0007895
449 Ga0373937_0012973
450 Ga0395900_0005151
451 Ga0395898_0003493
452 Ga0395905_0046213
453 Ga0395905_0060920
454 Ga0395901_0043590
455 Ga0436361_0410029
456 Ga0453684_0016205
457 Ga0453684_0031870
458 Ga0495592_0002648
459 Ga0495603_0039327
460 Ga0495629_0010733
461 Ga0495638_0025961
462 Ga0495638_0036163
463 Ga0495638_0036455
464 Ga0495653_0019469
465 Ga0495580_0050659
466 Ga0495605_0052743
467 Ga0495584_0009033
468 Ga0495585_0080826
469 Ga0495607_0014833
470 Ga0495583_0016678
471 Ga0495606_0001875
472 Ga0495606_0032527
473 Ga0495608_0002322
474 Ga0495616_0038516
475 Ga0495616_0060004
476 Ga0495620_0013927
477 Ga0495628_0011132
478 Ga0495631_0061595
479 Ga0495648_0006938
480 Ga0495648_0084926
481 Ga0495642_0086252
482 Ga0495652_0007767
483 Ga0495654_0029894
484 Ga0495640_0011681
485 Ga0495609_0002146
486 Ga0495645_0024043
487 Ga0495667_0000528
488 Ga0495656_0002383
489 Ga0495656_0017675
490 Ga0495634_0012565
491 Ga0495625_0009300
492 Ga0495625_0033179
493 Ga0495625_0106336
494 Ga0495635_0008549
495 Ga0495659_0000741
496 Ga0495659_0007392
497 Ga0495661_0005736
498 Ga0495661_0027061
499 Ga0495657_0003636
500 Ga0495599_0023691
501 Ga0495646_0004101
502 Ga0495669_0018430
503 Ga0495613_0063500
504 Ga0495670_0003272
505 Ga0495670_0012052
506 Ga0495671_0041414
507 Ga0495649_0007278
508 Ga0495600_0001951
509 Ga0495687_037322
510 Ga0495684_0000457
511 Ga0495593_0003312
512 Ga0495626_0034627
513 Ga0496100_0118304
514 Ga0496106_0091705
515 Ga0496107_0128183
516 Ga0496112_0000035
517 Ga0496112_0095365
518 Ga0496114_0088048
519 Ga0496116_0002501
520 Ga0496117_0030222
521 Ga0496118_0044041
522 Ga0496118_0104591
523 Ga0496118_0105971
524 Ga0496118_0112520
525 Ga0496119_0075187
526 Ga0496120_0021783
527 Ga0496120_0096649
528 Ga0496121_0003211
529 Ga0496121_0009082
530 Ga0496121_0031206
531 Ga0496121_0039220
532 Ga0496121_0046169
533 Ga0496122_0080137
534 Ga0496122_0094620
535 Ga0496123_0050867
536 Ga0496123_0063454
537 Ga0496124_0105066
538 Ga0496124_0125643
539 Ga0496125_0000406
540 Ga0496125_0000516
541 Ga0496125_0009348
542 Ga0496125_0016585
543 Ga0496126_0030950
544 Ga0496126_0041930
545 Ga0496126_0154203
546 Ga0501043_0050025
547 Ga0501046_0107530
548 Ga0501047_0011864
549 Ga0501047_0023320
550 Ga0501067_0080356
551 Ga0501035_0126583
552 Ga0501044_0063783
553 Ga0501044_0092321
554 nmdc:mga03n38_15900_c1
555 nmdc:mga0yw44_17795_c1
556 nmdc:mga04h51_8061_c1
557 nmdc:mga07m45_9479_c1
558 nmdc:mga0qj67_45682_c1
559 nmdc:mga08y16_131602_c1
560 nmdc:mga0n895_149136_c1
561 nmdc:mga08x19_41068_c1
562 nmdc:mga0sz30_20387_c1
563 Ga0495595_0002700
564 Ga0495595_0027969
565 Ga0495619_0012692
566 Ga0500583_0071335
567 Ga0500651_0002919
568 Ga0500566_0015288
569 Ga0500650_0001225
570 Ga0500554_010387
571 Ga0500556_0000016
572 Ga0500595_000631
573 Ga0500595_005028
574 Ga0500608_000117
575 Ga0500642_0000261
576 Ga0500652_000225
577 Ga0500559_0000017
578 Ga0500559_0000161
579 Ga0500568_0002573
580 Ga0500568_0025513
581 Ga0500616_0000169
582 Ga0500622_0018451
583 Ga0500627_0008586
584 Ga0500636_0002058
585 Ga0500636_0017264
586 2513675060
587 2513718144
588 2524466954
589 2603858283
590 2644291005
591 2793080846
592 2857527703
593 2876808981
594 2879113419
595 2885390395
596 2885414135
597 2889035405
598 2893067134
599 2903773163
600 2919073564
601 3005711078
602 8006933286
603 8006991002
604 8056687157

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF07687

M20_dimer

Peptidase dimerisation domain

260

407

0.96

PF01546

Peptidase_M20

Peptidase family M20/M25/M40

138

506

0.91

PF04389

Peptidase_M28

Peptidase family M28

122

245

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
4ppz-assembly1.cif.gz_A crystal structure of zinc-bound succinyl-diaminopimelate desuccinylase from neisseria meningitidis mc58 0.8576 45 492
4ppz-assembly1.cif.gz_A crystal structure of zinc-bound succinyl-diaminopimelate desuccinylase from neisseria meningitidis mc58 0.8555 45 492
1vgy-assembly1.cif.gz_B crystal structure of succinyl diaminopimelate desuccinylase 0.8442 45 492
1vgy-assembly1.cif.gz_B crystal structure of succinyl diaminopimelate desuccinylase 0.8421 45 492
1q7l-assembly1.cif.gz_A zn-binding domain of the t347g mutant of human aminoacylase-i 0.838 51 223
ID Description Score Start End Superfamily
af_Q55FR8_72_254_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9653 48 224 3.40.630.10
af_A0A1D8PLD9_97_300_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9412 50 223 3.40.630.10
af_F1M0Q9_12_214_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9325 45 237 3.40.630.10
af_Q55FR8_72_254_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.929 48 224 3.40.630.10
af_P27614_84_293_3.40.630.10 Alpha Beta;3-Layer(aba) Sandwich;Aminopeptidase;Zn peptidases 0.9278 46 229 3.40.630.10
ID Description Score Start End GO Terms
AF-A0A6G1X2L5-F1-model_v4 M20/M25/M40 family metallo-hydrolase 0.9787 57 492 GO:0006508
GO:0008233
AF-A0A2A5C120-F1-model_v4 Peptidase M20 dimerisation domain-containing protein 0.978 8 491 GO:0006508
GO:0008233
AF-A0A534VAB3-F1-model_v4 M20 family peptidase 0.9753 8 491 GO:0006508
GO:0008233
AF-A0A2V8L594-F1-model_v4 Peptidase M20 dimerisation domain-containing protein 0.9752 79 487 GO:0006508
GO:0008233
AF-A0A7C9VN62-F1-model_v4 M20 family peptidase 0.9751 135 490 GO:0006508
GO:0006520
GO:0008233
GO:0016811
GO:0043604
GO:0043605

Map