F395694

General Info

Members Datasets Scaffolds Average Seq Length
301 181 602 279

Family's Representative Sequence

Representative Sequence 3300005293|Ga0065715_10097943|Ga0065715_100979432
Length 330
Sequence MTFSAGERQRTGPETANLLKRRLLTPTVTRFAPAPTGALHLGHVVNALYVWGLARALDGRVLLRIEDHDRQRSRREAEQSMLDDLDWLGLAPDIYPTSAYRRGSCEGRQSERDEIYRDALAPLIAAGLVYGCRCTRAQLPENAAESRADQTSAERRYPGTCRHERIALEDGVGWRLVIEPGEEVFEDAIVGPRVQEPAAQCGDLLLRDRLGNWTYQCVAPIDDMVQGVTLVVRGQDLLASTGRQIRLARLLGRKVPPAFAHHPLVMKSLTQKLSKSDGDTGIRDLRTQGWSASEVLGHAAAIADLTPAPMPLEAGDVGCLFTPSSTTTST

Samples

Sample ID Description Type Environment
1 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
16 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
17 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
18 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
22 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
26 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
29 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
30 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
31 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
32 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
38 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
39 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
40 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
41 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
42 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
43 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
44 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
45 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
46 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
47 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
58 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
59 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
84 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
86 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
87 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
88 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
89 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
90 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
91 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
92 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
93 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
94 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
95 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
96 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
97 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
98 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
99 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
100 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
101 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
102 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
103 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
104 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
105 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
106 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
107 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
108 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
109 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
110 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
111 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
112 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
113 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
114 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
115 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
116 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
117 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
118 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
119 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
120 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
121 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
122 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
123 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
124 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
125 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
126 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
127 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
128 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
129 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
130 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
131 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
132 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
133 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
134 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
135 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
136 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
137 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
139 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
141 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
144 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
149 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
150 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
151 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
152 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
153 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
154 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
155 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
156 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
157 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
158 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
159 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
160 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
161 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
163 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
164 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
165 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
166 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
167 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
168 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
169 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
170 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
171 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
172 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
173 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
174 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
175 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
176 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
177 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
178 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
179 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
180 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
181 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.99
Nodule 0
Rhizoplane 4.98
Rhizosphere 92.69
Stem 0
Stem Tuber 0
Unclassified 20.93

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065715_10097943 3300005293 Bacteria 3614
2 Ga0065712_10081206 3300005290 Bacteria 3029
3 Ga0065715_10138589 3300005293 Unclassified 1881
4 Ga0065707_10139097 3300005295 Unclassified 1788
5 Ga0070676_10218015 3300005328 Bacteria 1259
6 Ga0070683_100001525 3300005329 Bacteria 17902
7 Ga0070683_100006306 3300005329 Bacteria 9952
8 Ga0070683_100443453 3300005329 Unclassified 1239
9 Ga0070690_100269200 3300005330 Bacteria 1211
10 Ga0070670_100006117 3300005331 Bacteria 10174
11 Ga0070670_100029738 3300005331 Bacteria 4705
12 Ga0070670_100103641 3300005331 Unclassified 2450
13 Ga0068869_100059505 3300005334 Bacteria 2797
14 Ga0070682_100156119 3300005337 Bacteria 1571
15 Ga0070661_100027048 3300005344 Bacteria 4129
16 Ga0070661_100468496 3300005344 Bacteria 1004
17 Ga0070668_100390006 3300005347 Unclassified 1187
18 Ga0070669_100009267 3300005353 Bacteria 7013
19 Ga0070669_100174847 3300005353 Bacteria 1676
20 Ga0070669_100266979 3300005353 Bacteria 1367
21 Ga0070675_100044776 3300005354 Bacteria 3619
22 Ga0070675_100066725 3300005354 Unclassified 2977
23 Ga0070675_100246802 3300005354 Bacteria 1561
24 Ga0070671_100064780 3300005355 Bacteria 3044
25 Ga0070674_100017289 3300005356 Bacteria 4533
26 Ga0070688_100270090 3300005365 Unclassified 1218
27 Ga0070667_100071778 3300005367 Bacteria 2949
28 Ga0070700_100008800 3300005441 Bacteria 5513
29 Ga0070663_100022167 3300005455 Bacteria 4241
30 Ga0070678_100182275 3300005456 Bacteria 1720
31 Ga0070662_100054785 3300005457 Bacteria 2890
32 Ga0070662_100291080 3300005457 Unclassified 1324
33 Ga0070681_10145903 3300005458 Bacteria 2295
34 Ga0070679_100221920 3300005530 Bacteria 1851
35 Ga0070684_100000273 3300005535 Bacteria 35830
36 Ga0070684_100011262 3300005535 Bacteria 7122
37 Ga0070697_100245176 3300005536 Bacteria 1531
38 Ga0070672_100168158 3300005543 Bacteria 1822
39 Ga0070686_100160409 3300005544 Unclassified 1583
40 Ga0070693_100028385 3300005547 Bacteria 3042
41 Ga0070665_100311405 3300005548 Bacteria 1578
42 Ga0070704_100620562 3300005549 Bacteria 952
43 Ga0070664_100001005 3300005564 Bacteria 22148
44 Ga0070664_100157139 3300005564 Bacteria 2010
45 Ga0070664_100177250 3300005564 Bacteria 1893
46 Ga0068856_100016586 3300005614 Bacteria 7130
47 Ga0068852_100667432 3300005616 Bacteria 1048
48 Ga0068861_100211252 3300005719 Bacteria 1635
49 Ga0068870_10059744 3300005840 Unclassified 2044
50 Ga0068862_100023303 3300005844 Bacteria 5186
51 Ga0081539_10008238 3300005985 Bacteria 9160
52 Ga0070717_10192107 3300006028 Unclassified 1784
53 Ga0075366_10085968 3300006195 Bacteria 1881
54 Ga0075428_100017355 3300006844 Bacteria 7955
55 Ga0075428_100039516 3300006844 Bacteria 5193
56 Ga0075428_100086130 3300006844 Unclassified 3426
57 Ga0075428_100328556 3300006844 Bacteria 1643
58 Ga0075430_100003701 3300006846 Bacteria 12846
59 Ga0075430_100075602 3300006846 Bacteria 2824
60 Ga0075430_100081892 3300006846 Bacteria 2704
61 Ga0075430_100205947 3300006846 Unclassified 1633
62 Ga0075431_100005775 3300006847 Bacteria 12240
63 Ga0075431_100016115 3300006847 Bacteria 7583
64 Ga0075431_100157184 3300006847 Unclassified 2339
65 Ga0075431_100263578 3300006847 Unclassified 1748
66 Ga0075431_100390105 3300006847 Bacteria 1395
67 Ga0075431_100437951 3300006847 Bacteria 1304
68 Ga0075433_10059614 3300006852 Bacteria 3339
69 Ga0075433_10080294 3300006852 Unclassified 2875
70 Ga0075433_10158911 3300006852 Unclassified 2011
71 Ga0075433_10166130 3300006852 Bacteria 1964
72 Ga0075433_10292983 3300006852 Bacteria 1441
73 Ga0075433_10363981 3300006852 Bacteria 1277
74 Ga0075434_100003709 3300006871 Bacteria 13644
75 Ga0075434_100057596 3300006871 Unclassified 3862
76 Ga0075434_100072647 3300006871 Bacteria 3432
77 Ga0075434_100127194 3300006871 Unclassified 2565
78 Ga0075434_100208844 3300006871 Bacteria 1973
79 Ga0075429_100004354 3300006880 Bacteria 12163
80 Ga0075429_100055791 3300006880 Bacteria 3438
81 Ga0068865_100162510 3300006881 Unclassified 1705
82 Ga0075435_100434976 3300007076 Bacteria 1131
83 Ga0105240_10024914 3300009093 Bacteria 7875
84 Ga0111539_10001220 3300009094 Bacteria 34222
85 Ga0111539_10006716 3300009094 Bacteria 14815
86 Ga0111539_10027730 3300009094 Bacteria 6918
87 Ga0111539_10054209 3300009094 Bacteria 4771
88 Ga0111539_10292749 3300009094 Bacteria 1894
89 Ga0114129_10004883 3300009147 Bacteria 18917
90 Ga0114129_10005880 3300009147 Bacteria 17378
91 Ga0114129_10010013 3300009147 Bacteria 13512
92 Ga0114129_10012437 3300009147 Bacteria 12116
93 Ga0114129_10133839 3300009147 Bacteria 3403
94 Ga0114129_10797990 3300009147 Bacteria 1204
95 Ga0105243_10284063 3300009148 Bacteria 1492
96 Ga0105249_10118683 3300009553 Unclassified 2511
97 Ga0157369_10222008 3300013105 Bacteria 1978
98 Ga0157374_10055157 3300013296 Bacteria 3708
99 Ga0163163_10095984 3300014325 Bacteria 2985
100 Ga0157380_10167541 3300014326 Bacteria 1916
101 Ga0157380_10256021 3300014326 Bacteria 1587
102 Ga0157377_10015696 3300014745 Bacteria 3881
103 Ga0157377_10117856 3300014745 Unclassified 1605
104 Ga0157377_10180753 3300014745 Bacteria 1326
105 Ga0157376_10258949 3300014969 Bacteria 1629
106 Ga0207682_10170941 3300025893 Unclassified 989
107 Ga0207680_10021364 3300025903 Bacteria 3501
108 Ga0207645_10234706 3300025907 Bacteria 1211
109 Ga0207643_10075437 3300025908 Unclassified 1946
110 Ga0207695_10035928 3300025913 Bacteria 5363
111 Ga0207660_10024684 3300025917 Bacteria 4073
112 Ga0207649_10089408 3300025920 Unclassified 2013
113 Ga0207652_10172769 3300025921 Bacteria 1939
114 Ga0207681_10056265 3300025923 Unclassified 2682
115 Ga0207681_10125691 3300025923 Bacteria 1888
116 Ga0207681_10167409 3300025923 Bacteria 1663
117 Ga0207650_10029604 3300025925 Unclassified 3937
118 Ga0207659_10022585 3300025926 Bacteria 4190
119 Ga0207659_10491297 3300025926 Bacteria 1038
120 Ga0207700_10091878 3300025928 Bacteria 2398
121 Ga0207644_10252927 3300025931 Bacteria 1406
122 Ga0207706_10032808 3300025933 Bacteria 4621
123 Ga0207706_10391139 3300025933 Bacteria 1206
124 Ga0207691_10180610 3300025940 Bacteria 1844
125 Ga0207711_10185133 3300025941 Bacteria 1895
126 Ga0207661_10004267 3300025944 Bacteria 10010
127 Ga0207661_10014003 3300025944 Bacteria 5866
128 Ga0207661_10354779 3300025944 Unclassified 1324
129 Ga0207679_10000690 3300025945 Bacteria 22582
130 Ga0207679_10175946 3300025945 Bacteria 1766
131 Ga0207679_10291255 3300025945 Bacteria 1404
132 Ga0207712_10058224 3300025961 Unclassified 2729
133 Ga0207712_10508155 3300025961 Bacteria 1031
134 Ga0207678_10028282 3300026067 Bacteria 4895
135 Ga0207708_10016334 3300026075 Bacteria 5579
136 Ga0207708_10039121 3300026075 Bacteria 3613
137 Ga0207674_10015338 3300026116 Bacteria 8421
138 Ga0207675_100255945 3300026118 Bacteria 1696
139 Ga0207698_10608554 3300026142 Bacteria 1078
140 Ga0207428_10002958 3300027907 Bacteria 16812
141 Ga0207428_10003374 3300027907 Bacteria 15526
142 Ga0207428_10006416 3300027907 Bacteria 10862
143 Ga0207428_10012015 3300027907 Bacteria 7621
144 Ga0207428_10024327 3300027907 Bacteria 5087
145 Ga0268265_10013036 3300028380 Bacteria 5645
146 Ga0307408_100030598 3300031548 Bacteria 3739
147 Ga0307408_100032703 3300031548 Unclassified 3628
148 Ga0307408_100037818 3300031548 Bacteria 3401
149 Ga0307408_100137136 3300031548 Bacteria 1916
150 Ga0307405_10219022 3300031731 Unclassified 1395
151 Ga0307413_10340351 3300031824 Bacteria 1153
152 Ga0307410_10012590 3300031852 Bacteria 4899
153 Ga0307410_10026035 3300031852 Bacteria 3677
154 Ga0307410_10158716 3300031852 Bacteria 1692
155 Ga0307410_10446418 3300031852 Unclassified 1054
156 Ga0307406_10013746 3300031901 Bacteria 4644
157 Ga0307406_10038725 3300031901 Unclassified 2953
158 Ga0307406_10177732 3300031901 Unclassified 1547
159 Ga0307407_10107448 3300031903 Unclassified 1745
160 Ga0307407_10203756 3300031903 Bacteria 1327
161 Ga0307409_100007414 3300031995 Bacteria 6559
162 Ga0307409_100169272 3300031995 Unclassified 1921
163 Ga0307409_100317542 3300031995 Bacteria 1456
164 Ga0307416_100020286 3300032002 Bacteria 4739
165 Ga0307416_100044664 3300032002 Bacteria 3481
166 Ga0307416_100085776 3300032002 Bacteria 2681
167 Ga0307416_100294417 3300032002 Unclassified 1609
168 Ga0307414_10073572 3300032004 Bacteria 2473
169 Ga0307414_10258603 3300032004 Bacteria 1451
170 Ga0307414_10544076 3300032004 Unclassified 1034
171 Ga0307411_10063208 3300032005 Unclassified 2473
172 Ga0307411_10074661 3300032005 Bacteria 2311
173 Ga0307411_10083602 3300032005 Bacteria 2205
174 Ga0307411_10138156 3300032005 Bacteria 1793
175 Ga0307411_10181427 3300032005 Unclassified 1598
176 Ga0373926_0074279 3300035083 Unclassified 1252
177 Ga0373945_0020772 3300035116 Unclassified 2252
178 Ga0373956_0077617 3300035119 Bacteria 1521
179 Ga0373943_0091583 3300035170 Unclassified 1575
180 Ga0373955_0006694 3300035172 Bacteria 5259
181 Ga0373924_0045032 3300035410 Unclassified 1814
182 Ga0373947_0157025 3300035725 Bacteria 1469
183 Ga0373937_0290451 3300036401 Unclassified 1545
184 Ga0373925_0067351 3300037068 Unclassified 2700
185 Ga0436365_0493341 3300039437 Bacteria 1247
186 Ga0439453_0027222 3300041408 Bacteria 1063
187 Ga0450923_001827 3300042125 Unclassified 2918
188 Ga0439435_0001778 3300042436 Bacteria 4105
189 Ga0439464_0007023 3300042439 Bacteria 2941
190 Ga0495592_0150897 3300046454 Bacteria 1607
191 Ga0495629_0295495 3300046459 Unclassified 1110
192 Ga0495641_0155929 3300046461 Bacteria 1021
193 Ga0495664_0007862 3300046477 Bacteria 5935
194 Ga0495628_0045363 3300046516 Bacteria 3496
195 Ga0495628_0152545 3300046516 Bacteria 1759
196 Ga0495666_0005685 3300046526 Bacteria 6284
197 Ga0495640_0006397 3300046533 Bacteria 9317
198 Ga0495586_0011932 3300046535 Bacteria 4615
199 Ga0495621_0002184 3300046539 Bacteria 5209
200 Ga0495667_0058551 3300046559 Bacteria 2531
201 Ga0495647_0041295 3300046681 Bacteria 1756
202 Ga0495669_0001426 3300046684 Bacteria 9845
203 Ga0495624_0016266 3300046690 Bacteria 5009
204 Ga0495581_0202297 3300047315 Bacteria 1162
205 Ga0495674_0009517 3300047319 Bacteria 9231
206 Ga0495680_0026933 3300047322 Bacteria 4732
207 Ga0495684_0063345 3300047471 Bacteria 2811
208 Ga0495614_0146392 3300048089 Bacteria 1052
209 Ga0496101_0181494 3300048904 Bacteria 1621
210 Ga0496102_0648766 3300048905 Bacteria 979
211 Ga0496104_0003745 3300048907 Bacteria 13141
212 Ga0496104_0041572 3300048907 Bacteria 4311
213 Ga0496104_0160561 3300048907 Bacteria 2156
214 Ga0496105_0026059 3300048908 Bacteria 4765
215 Ga0496105_0026126 3300048908 Bacteria 4759
216 Ga0496108_0001942 3300048911 Bacteria 16553
217 Ga0496109_0002149 3300048912 Bacteria 16387
218 Ga0496109_0006689 3300048912 Bacteria 9706
219 Ga0496110_0000299 3300048913 Bacteria 32511
220 Ga0496111_0005717 3300048914 Bacteria 8017
221 Ga0496112_0001702 3300048915 Bacteria 17171
222 Ga0496112_0026145 3300048915 Bacteria 5612
223 Ga0496113_0002622 3300048916 Bacteria 10528
224 Ga0501031_0012895 3300049568 Bacteria 5460
225 Ga0501032_0080434 3300049569 Bacteria 2168
226 Ga0501033_0070780 3300049570 Bacteria 2562
227 Ga0501034_0347264 3300049571 Bacteria 1413
228 Ga0501037_0044880 3300049573 Bacteria 3245
229 Ga0501038_0033237 3300049574 Bacteria 4544
230 Ga0501039_0027383 3300049575 Bacteria 4382
231 Ga0501040_0096201 3300049576 Bacteria 2061
232 Ga0501040_0354667 3300049576 Bacteria 1051
233 Ga0501041_0020238 3300049577 Bacteria 3976
234 Ga0501043_0023595 3300049579 Bacteria 4825
235 Ga0501048_0062362 3300049582 Bacteria 2638
236 Ga0501048_0248280 3300049582 Unclassified 1263
237 Ga0501048_0346745 3300049582 Bacteria 1059
238 Ga0501068_0059314 3300049584 Bacteria 2323
239 Ga0501069_0022459 3300049585 Bacteria 3432
240 Ga0501071_0012113 3300049587 Bacteria 5833
241 Ga0501072_0049781 3300049588 Bacteria 3298
242 Ga0501072_0285267 3300049588 Unclassified 1313
243 Ga0501072_0492183 3300049588 Bacteria 970
244 Ga0501073_0044364 3300049589 Bacteria 3134
245 Ga0501073_0255581 3300049589 Bacteria 1209
246 Ga0501074_0034551 3300049590 Bacteria 3664
247 Ga0501074_0377553 3300049590 Bacteria 1006
248 Ga0501075_0037370 3300049591 Bacteria 3627
249 Ga0501075_0314225 3300049591 Unclassified 1194
250 Ga0501076_0155540 3300049592 Bacteria 1861
251 Ga0501076_0321647 3300049592 Bacteria 1269
252 Ga0501076_0548415 3300049592 Bacteria 953
253 Ga0501077_0025972 3300049593 Bacteria 3715
254 Ga0501217_016461 3300049661 Unclassified 1694
255 Ga0501079_0054487 3300049741 Bacteria 3084
256 Ga0501080_0029655 3300049742 Bacteria 5092
257 Ga0501083_0112226 3300049744 Bacteria 1791
258 Ga0501035_0089541 3300049822 Bacteria 2710
259 Ga0501045_0014739 3300049824 Bacteria 5542
260 nmdc:mga0yw44_2075_c1 3300050492 Bacteria 8364
261 nmdc:mga0k408_14065_c1 3300050493 Bacteria 4400
262 nmdc:mga04h51_34754_c1 3300050495 Bacteria 1612
263 nmdc:mga07m45_9692_c1 3300050496 Bacteria 3996
264 nmdc:mga05p37_11958_c1 3300050507 Bacteria 10352
265 nmdc:mga05p37_3754_c1 3300050507 Bacteria 17774
266 nmdc:mga05p37_61541_c1 3300050507 Bacteria 4621
267 nmdc:mga05p37_626513_c1 3300050507 Bacteria 1209
268 nmdc:mga05p37_895828_c1 3300050507 Bacteria 957
269 nmdc:mga05p37_99278_c1 3300050507 Unclassified 3586
270 nmdc:mga09592_220716_c1 3300050508 Bacteria 1642
271 nmdc:mga09592_31106_c1 3300050508 Bacteria 4445
272 nmdc:mga09592_33992_c1 3300050508 Unclassified 4261
273 nmdc:mga0qj67_136355_c1 3300050509 Unclassified 1989
274 nmdc:mga0qj67_30919_c1 3300050509 Unclassified 4169
275 nmdc:mga0qj67_31089_c1 3300050509 Bacteria 4158
276 nmdc:mga06r32_11255_c1 3300050510 Bacteria 8058
277 nmdc:mga06r32_353385_c1 3300050510 Unclassified 1454
278 nmdc:mga06r32_56657_c1 3300050510 Unclassified 3763
279 nmdc:mga06r32_98587_c1 3300050510 Bacteria 2865
280 nmdc:mga08y16_322059_c1 3300050511 Bacteria 1591
281 nmdc:mga08y16_39508_c1 3300050511 Bacteria 4951
282 nmdc:mga08y16_5685_c1 3300050511 Bacteria 13067
283 nmdc:mga08y16_6102_c1 3300050511 Bacteria 12638
284 nmdc:mga08y16_6168_c1 3300050511 Bacteria 12578
285 nmdc:mga0n895_492082_c1 3300050512 Bacteria 1236
286 nmdc:mga0n895_56452_c1 3300050512 Unclassified 3868
287 nmdc:mga0n895_57851_c1 3300050512 Unclassified 3822
288 nmdc:mga0a205_104707_c1 3300050515 Unclassified 2728
289 nmdc:mga0a205_172458_c1 3300050515 Unclassified 2059
290 nmdc:mga0a205_216107_c1 3300050515 Bacteria 1804
291 nmdc:mga0a205_3170_c1 3300050515 Bacteria 14608
292 nmdc:mga0a205_94016_c1 3300050515 Unclassified 2896
293 Ga0500556_0049216 3300053104 Bacteria 1518
294 Ga0501084_0016480 3300054114 Bacteria 6136
295 Ga0590071_008498 3300059421 Bacteria 2414
296 Ga0590074_000569 3300059423 Bacteria 5539
297 Ga0590075_001867 3300059424 Bacteria 5121
298 Ga0590077_001369 3300059426 Bacteria 5745
299 Ga0501082_0046235 3300060353 Bacteria 3752
300 Ga0501082_0367888 3300060353 Bacteria 1254
301 Ga0530510_0060038 3300061734 Bacteria 2751
302 Ga0065715_10097943
303 Ga0065712_10081206
304 Ga0065715_10138589
305 Ga0065707_10139097
306 Ga0070676_10218015
307 Ga0070683_100001525
308 Ga0070683_100006306
309 Ga0070683_100443453
310 Ga0070690_100269200
311 Ga0070670_100006117
312 Ga0070670_100029738
313 Ga0070670_100103641
314 Ga0068869_100059505
315 Ga0070682_100156119
316 Ga0070661_100027048
317 Ga0070661_100468496
318 Ga0070668_100390006
319 Ga0070669_100009267
320 Ga0070669_100174847
321 Ga0070669_100266979
322 Ga0070675_100044776
323 Ga0070675_100066725
324 Ga0070675_100246802
325 Ga0070671_100064780
326 Ga0070674_100017289
327 Ga0070688_100270090
328 Ga0070667_100071778
329 Ga0070700_100008800
330 Ga0070663_100022167
331 Ga0070678_100182275
332 Ga0070662_100054785
333 Ga0070662_100291080
334 Ga0070681_10145903
335 Ga0070679_100221920
336 Ga0070684_100000273
337 Ga0070684_100011262
338 Ga0070697_100245176
339 Ga0070672_100168158
340 Ga0070686_100160409
341 Ga0070693_100028385
342 Ga0070665_100311405
343 Ga0070704_100620562
344 Ga0070664_100001005
345 Ga0070664_100157139
346 Ga0070664_100177250
347 Ga0068856_100016586
348 Ga0068852_100667432
349 Ga0068861_100211252
350 Ga0068870_10059744
351 Ga0068862_100023303
352 Ga0081539_10008238
353 Ga0070717_10192107
354 Ga0075366_10085968
355 Ga0075428_100017355
356 Ga0075428_100039516
357 Ga0075428_100086130
358 Ga0075428_100328556
359 Ga0075430_100003701
360 Ga0075430_100075602
361 Ga0075430_100081892
362 Ga0075430_100205947
363 Ga0075431_100005775
364 Ga0075431_100016115
365 Ga0075431_100157184
366 Ga0075431_100263578
367 Ga0075431_100390105
368 Ga0075431_100437951
369 Ga0075433_10059614
370 Ga0075433_10080294
371 Ga0075433_10158911
372 Ga0075433_10166130
373 Ga0075433_10292983
374 Ga0075433_10363981
375 Ga0075434_100003709
376 Ga0075434_100057596
377 Ga0075434_100072647
378 Ga0075434_100127194
379 Ga0075434_100208844
380 Ga0075429_100004354
381 Ga0075429_100055791
382 Ga0068865_100162510
383 Ga0075435_100434976
384 Ga0105240_10024914
385 Ga0111539_10001220
386 Ga0111539_10006716
387 Ga0111539_10027730
388 Ga0111539_10054209
389 Ga0111539_10292749
390 Ga0114129_10004883
391 Ga0114129_10005880
392 Ga0114129_10010013
393 Ga0114129_10012437
394 Ga0114129_10133839
395 Ga0114129_10797990
396 Ga0105243_10284063
397 Ga0105249_10118683
398 Ga0157369_10222008
399 Ga0157374_10055157
400 Ga0163163_10095984
401 Ga0157380_10167541
402 Ga0157380_10256021
403 Ga0157377_10015696
404 Ga0157377_10117856
405 Ga0157377_10180753
406 Ga0157376_10258949
407 Ga0207682_10170941
408 Ga0207680_10021364
409 Ga0207645_10234706
410 Ga0207643_10075437
411 Ga0207695_10035928
412 Ga0207660_10024684
413 Ga0207649_10089408
414 Ga0207652_10172769
415 Ga0207681_10056265
416 Ga0207681_10125691
417 Ga0207681_10167409
418 Ga0207650_10029604
419 Ga0207659_10022585
420 Ga0207659_10491297
421 Ga0207700_10091878
422 Ga0207644_10252927
423 Ga0207706_10032808
424 Ga0207706_10391139
425 Ga0207691_10180610
426 Ga0207711_10185133
427 Ga0207661_10004267
428 Ga0207661_10014003
429 Ga0207661_10354779
430 Ga0207679_10000690
431 Ga0207679_10175946
432 Ga0207679_10291255
433 Ga0207712_10058224
434 Ga0207712_10508155
435 Ga0207678_10028282
436 Ga0207708_10016334
437 Ga0207708_10039121
438 Ga0207674_10015338
439 Ga0207675_100255945
440 Ga0207698_10608554
441 Ga0207428_10002958
442 Ga0207428_10003374
443 Ga0207428_10006416
444 Ga0207428_10012015
445 Ga0207428_10024327
446 Ga0268265_10013036
447 Ga0307408_100030598
448 Ga0307408_100032703
449 Ga0307408_100037818
450 Ga0307408_100137136
451 Ga0307405_10219022
452 Ga0307413_10340351
453 Ga0307410_10012590
454 Ga0307410_10026035
455 Ga0307410_10158716
456 Ga0307410_10446418
457 Ga0307406_10013746
458 Ga0307406_10038725
459 Ga0307406_10177732
460 Ga0307407_10107448
461 Ga0307407_10203756
462 Ga0307409_100007414
463 Ga0307409_100169272
464 Ga0307409_100317542
465 Ga0307416_100020286
466 Ga0307416_100044664
467 Ga0307416_100085776
468 Ga0307416_100294417
469 Ga0307414_10073572
470 Ga0307414_10258603
471 Ga0307414_10544076
472 Ga0307411_10063208
473 Ga0307411_10074661
474 Ga0307411_10083602
475 Ga0307411_10138156
476 Ga0307411_10181427
477 Ga0373926_0074279
478 Ga0373945_0020772
479 Ga0373956_0077617
480 Ga0373943_0091583
481 Ga0373955_0006694
482 Ga0373924_0045032
483 Ga0373947_0157025
484 Ga0373937_0290451
485 Ga0373925_0067351
486 Ga0436365_0493341
487 Ga0439453_0027222
488 Ga0450923_001827
489 Ga0439435_0001778
490 Ga0439464_0007023
491 Ga0495592_0150897
492 Ga0495629_0295495
493 Ga0495641_0155929
494 Ga0495664_0007862
495 Ga0495628_0045363
496 Ga0495628_0152545
497 Ga0495666_0005685
498 Ga0495640_0006397
499 Ga0495586_0011932
500 Ga0495621_0002184
501 Ga0495667_0058551
502 Ga0495647_0041295
503 Ga0495669_0001426
504 Ga0495624_0016266
505 Ga0495581_0202297
506 Ga0495674_0009517
507 Ga0495680_0026933
508 Ga0495684_0063345
509 Ga0495614_0146392
510 Ga0496101_0181494
511 Ga0496102_0648766
512 Ga0496104_0003745
513 Ga0496104_0041572
514 Ga0496104_0160561
515 Ga0496105_0026059
516 Ga0496105_0026126
517 Ga0496108_0001942
518 Ga0496109_0002149
519 Ga0496109_0006689
520 Ga0496110_0000299
521 Ga0496111_0005717
522 Ga0496112_0001702
523 Ga0496112_0026145
524 Ga0496113_0002622
525 Ga0501031_0012895
526 Ga0501032_0080434
527 Ga0501033_0070780
528 Ga0501034_0347264
529 Ga0501037_0044880
530 Ga0501038_0033237
531 Ga0501039_0027383
532 Ga0501040_0096201
533 Ga0501040_0354667
534 Ga0501041_0020238
535 Ga0501043_0023595
536 Ga0501048_0062362
537 Ga0501048_0248280
538 Ga0501048_0346745
539 Ga0501068_0059314
540 Ga0501069_0022459
541 Ga0501071_0012113
542 Ga0501072_0049781
543 Ga0501072_0285267
544 Ga0501072_0492183
545 Ga0501073_0044364
546 Ga0501073_0255581
547 Ga0501074_0034551
548 Ga0501074_0377553
549 Ga0501075_0037370
550 Ga0501075_0314225
551 Ga0501076_0155540
552 Ga0501076_0321647
553 Ga0501076_0548415
554 Ga0501077_0025972
555 Ga0501217_016461
556 Ga0501079_0054487
557 Ga0501080_0029655
558 Ga0501083_0112226
559 Ga0501035_0089541
560 Ga0501045_0014739
561 nmdc:mga0yw44_2075_c1
562 nmdc:mga0k408_14065_c1
563 nmdc:mga04h51_34754_c1
564 nmdc:mga07m45_9692_c1
565 nmdc:mga05p37_11958_c1
566 nmdc:mga05p37_3754_c1
567 nmdc:mga05p37_61541_c1
568 nmdc:mga05p37_626513_c1
569 nmdc:mga05p37_895828_c1
570 nmdc:mga05p37_99278_c1
571 nmdc:mga09592_220716_c1
572 nmdc:mga09592_31106_c1
573 nmdc:mga09592_33992_c1
574 nmdc:mga0qj67_136355_c1
575 nmdc:mga0qj67_30919_c1
576 nmdc:mga0qj67_31089_c1
577 nmdc:mga06r32_11255_c1
578 nmdc:mga06r32_353385_c1
579 nmdc:mga06r32_56657_c1
580 nmdc:mga06r32_98587_c1
581 nmdc:mga08y16_322059_c1
582 nmdc:mga08y16_39508_c1
583 nmdc:mga08y16_5685_c1
584 nmdc:mga08y16_6102_c1
585 nmdc:mga08y16_6168_c1
586 nmdc:mga0n895_492082_c1
587 nmdc:mga0n895_56452_c1
588 nmdc:mga0n895_57851_c1
589 nmdc:mga0a205_104707_c1
590 nmdc:mga0a205_172458_c1
591 nmdc:mga0a205_216107_c1
592 nmdc:mga0a205_3170_c1
593 nmdc:mga0a205_94016_c1
594 Ga0500556_0049216
595 Ga0501084_0016480
596 Ga0590071_008498
597 Ga0590074_000569
598 Ga0590075_001867
599 Ga0590077_001369
600 Ga0501082_0046235
601 Ga0501082_0367888
602 Ga0530510_0060038

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00749

tRNA-synt_1c

tRNA synthetases class I (E and Q), catalytic domain

26

297

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
7k86-assembly1.cif.gz_A crystal structure of glutamyl-trna synthetase (gltx) from stenotrophomonas maltophilia 0.8778 2 278
7k86-assembly2.cif.gz_B crystal structure of glutamyl-trna synthetase (gltx) from stenotrophomonas maltophilia 0.8729 2 278
6b1p-assembly1.cif.gz_A crystal structure of glutamate-trna synthetase from helicobacter pylori 0.8699 1 275
5h4v-assembly2.cif.gz_B structure of glutamyl-trna synthetase (xoo1504) from xanthomonas oryzae pv. oryzae 0.8612 2 274
5h4v-assembly5.cif.gz_E structure of glutamyl-trna synthetase (xoo1504) from xanthomonas oryzae pv. oryzae 0.8601 2 278
ID Description Score Start End Superfamily
4a91A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9596 1 67 3.40.50.620
3akzC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9566 3 241 3.40.50.620
1nzjA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9453 1 67 3.40.50.620
3akzC01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9262 3 241 3.40.50.620
4a91A02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8775 86 237 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A535PGZ0-F1-model_v4 Glutamyl/glutaminyl-tRNA synthetase class Ib catalytic domain-containing protein 0.9913 1 85 GO:0004818
GO:0005524
GO:0005829
GO:0006424
AF-A0A7W1P8N8-F1-model_v4 Glutamyl/glutaminyl-tRNA synthetase class Ib catalytic domain-containing protein 0.981 2 278 GO:0004818
GO:0005524
GO:0005829
GO:0006424
AF-A0A523NGV3-F1-model_v4 Glutamyl/glutaminyl-tRNA synthetase class Ib catalytic domain-containing protein 0.9671 2 209 GO:0004818
GO:0005524
GO:0005829
GO:0006424
AF-A0A4P5W914-F1-model_v4 tRNA glutamyl-Q synthetase 0.9544 1 278 GO:0004818
GO:0005524
GO:0005829
GO:0006424
AF-A0A4Q6G739-F1-model_v4 Glutamyl/glutaminyl-tRNA synthetase class Ib catalytic domain-containing protein 0.9535 1 277 GO:0004818
GO:0005524
GO:0005829
GO:0006424

Map