F394737

General Info

Members Datasets Scaffolds Average Seq Length
299 165 598 641

Family's Representative Sequence

Representative Sequence 3300005577|Ga0068857_100006610|Ga0068857_10000661011
Length 670
Sequence MQLQNTIKNLRSGANFFRIMKYEDSSQNLRARLRFIQALVVVLLAALGVRLYVLQVVRGEKYAEIAENQRHRRLPIPAPRGVIFDREGKVLVDSRPIYNVILTREDVKGKDLSSLVDPLADGLGLDSDLLRDRFELVKSMPAFESIQVKQGATQGDIAWVESHNLEFPELRVEKQPQRRYPANGSLAHVLGYVGEISPDQLKQQSFKDKGLKPGDVIGQSGIEQIYDDYLRGRDGYREVVVDSRGRIQDEIETVDPQPGRDLVTTIDSDLQNTAEEQLANSTTKRGVIIAMDPNNGEVLALASAPSFDPNLFSQRITTKEGRAEYIKLLNDPETPLLNRAIQSRYPPGSTWKVPMSVAGLQQGAITIDHSNLVCGGGIQVGNKFTRCMGNHGSPDLKSAITHSCDGYFYRLGLKMGIDGIVSMVDEFDLNKRTGIDLPNEVVSWTPSREFKRRMQPRDPDWRDIDTVYASFGQVYDIITPISLIRTISAVSQSGRMFIPHLLKEVKPLGDQGTPDYKPAVGFQPLDPSRPNPKNIPIPEDIHQLVVEGMWGVVNNGGTGASIKMAGFDIAGKTGTAQVVGLGKDTGKNKDHAWFVSYAPAFKPEISMVALIENSGFGGANAAPAIRRIYDVYYRKTRHEEPPGAVQIAKKPAPSPTPATLKTGPTIAKNQ

Samples

Sample ID Description Type Environment
1 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
2 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
7 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
8 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
10 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
11 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
12 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
13 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
14 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
15 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
16 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
17 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
18 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
19 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
20 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
23 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
24 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
25 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
26 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
27 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
28 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
29 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
30 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
31 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
32 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
33 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
34 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
35 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
36 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
37 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
38 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
39 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
40 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
41 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
42 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
47 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
48 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
49 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
50 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
51 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
52 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
53 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
54 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
55 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
56 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
57 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
58 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
59 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
60 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
61 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
62 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
63 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
64 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
66 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
67 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
68 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
69 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
70 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
71 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
72 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
73 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
74 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
75 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
76 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
77 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
78 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
79 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
80 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
81 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
82 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
83 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
121 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
122 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
123 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
124 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
125 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
126 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
127 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
128 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
129 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
130 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
131 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
132 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
133 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
134 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
135 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
136 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
137 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
138 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
139 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
140 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
141 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
142 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
143 3300049519 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_B_7_drought Metagenome Rhizosphere
144 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
145 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
146 3300049649 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_A_0_drought Metagenome Rhizosphere
147 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
148 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
149 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
150 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
151 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
152 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
153 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
154 3300049673 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_A_3_drought Metagenome Rhizosphere
155 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
156 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
157 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
158 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
159 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
160 3300049850 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control Metagenome Rhizosphere
161 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
162 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
163 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
164 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
165 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.33
Nodule 0
Rhizoplane 1.34
Rhizosphere 95.99
Stem 0
Stem Tuber 0
Unclassified 16.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0068857_100006610 3300005577 Bacteria 9957
2 JGI24751J29686_10000059 3300002459 Bacteria 61971
3 JGI25406J46586_10001861 3300003203 Bacteria 9900
4 rootL2_10135102 3300003322 Bacteria 3761
5 Ga0065714_10064422 3300005288 Bacteria 270668
6 Ga0065704_10072006 3300005289 Bacteria 9395
7 Ga0065712_10000122 3300005290 Bacteria 92508
8 Ga0065712_10004647 3300005290 Bacteria 6734
9 Ga0065712_10014381 3300005290 Unclassified 2256
10 Ga0065715_10004777 3300005293 Bacteria 5959
11 Ga0065715_10010522 3300005293 Bacteria 2691
12 Ga0065715_10092583 3300005293 Bacteria 5039
13 Ga0065707_10001816 3300005295 Bacteria 12318
14 Ga0065707_10091523 3300005295 Bacteria 3908
15 Ga0070690_100000612 3300005330 Bacteria 18067
16 Ga0070690_100026389 3300005330 Unclassified 3584
17 Ga0070670_100057371 3300005331 Unclassified 3343
18 Ga0068869_100006262 3300005334 Bacteria 7535
19 Ga0068869_100085376 3300005334 Bacteria 2364
20 Ga0070680_100002905 3300005336 Bacteria 12732
21 Ga0070680_100004986 3300005336 Bacteria 10004
22 Ga0070682_100000112 3300005337 Bacteria 72106
23 Ga0070682_100056640 3300005337 Unclassified 2466
24 Ga0068868_100005161 3300005338 Bacteria 9167
25 Ga0070689_100004627 3300005340 Bacteria 9316
26 Ga0070687_100007607 3300005343 Unclassified 4531
27 Ga0070687_100032255 3300005343 Unclassified 2576
28 Ga0070692_10017881 3300005345 Bacteria 3399
29 Ga0070669_100002338 3300005353 Bacteria 13706
30 Ga0070669_100003575 3300005353 Bacteria 11217
31 Ga0070671_100001508 3300005355 Bacteria 17436
32 Ga0070671_100013718 3300005355 Bacteria 6536
33 Ga0070673_100113228 3300005364 Bacteria 2253
34 Ga0070688_100031314 3300005365 Bacteria 3199
35 Ga0070659_100007413 3300005366 Bacteria 7967
36 Ga0070705_100013010 3300005440 Bacteria 4247
37 Ga0070700_100000065 3300005441 Bacteria 76224
38 Ga0070700_100011225 3300005441 Bacteria 4960
39 Ga0070700_100042025 3300005441 Unclassified 2805
40 Ga0070700_100054391 3300005441 Unclassified 2501
41 Ga0070694_100031092 3300005444 Unclassified 3498
42 Ga0070708_100032294 3300005445 Bacteria 4539
43 Ga0070708_100045464 3300005445 Bacteria 3867
44 Ga0070681_10000089 3300005458 Bacteria 68795
45 Ga0070681_10062732 3300005458 Bacteria 3690
46 Ga0068867_100016731 3300005459 Bacteria 5211
47 Ga0068867_100021153 3300005459 Bacteria 4640
48 Ga0070706_100000555 3300005467 Bacteria 43489
49 Ga0070706_100024076 3300005467 Bacteria 5606
50 Ga0070706_100068603 3300005467 Bacteria 3279
51 Ga0070706_100080250 3300005467 Bacteria 3021
52 Ga0070707_100021034 3300005468 Bacteria 6162
53 Ga0070698_100005868 3300005471 Bacteria 13418
54 Ga0070698_100007364 3300005471 Bacteria 11916
55 Ga0070698_100010525 3300005471 Bacteria 9859
56 Ga0070698_100014915 3300005471 Bacteria 8216
57 Ga0070699_100023796 3300005518 Bacteria 5278
58 Ga0070679_100000014 3300005530 Bacteria 150481
59 Ga0070679_100061444 3300005530 Bacteria 3745
60 Ga0070697_100000160 3300005536 Bacteria 54910
61 Ga0070697_100001279 3300005536 Bacteria 18982
62 Ga0070697_100078034 3300005536 Bacteria 2725
63 Ga0070672_100015915 3300005543 Bacteria 5372
64 Ga0070686_100001858 3300005544 Bacteria 11777
65 Ga0070696_100011468 3300005546 Bacteria 5936
66 Ga0070693_100004768 3300005547 Bacteria 6454
67 Ga0070693_100013550 3300005547 Bacteria 4156
68 Ga0070704_100008216 3300005549 Bacteria 6243
69 Ga0070664_100001972 3300005564 Bacteria 16442
70 Ga0068854_100049371 3300005578 Bacteria 3005
71 Ga0068856_100063302 3300005614 Bacteria 3654
72 Ga0070702_100002731 3300005615 Bacteria 7715
73 Ga0070702_100012835 3300005615 Unclassified 4215
74 Ga0070702_100027047 3300005615 Bacteria 3091
75 Ga0068859_100002543 3300005617 Bacteria 18515
76 Ga0068859_100025095 3300005617 Bacteria 5982
77 Ga0068859_100040476 3300005617 Unclassified 4678
78 Ga0068859_100059561 3300005617 Unclassified 3847
79 Ga0068859_100073847 3300005617 Unclassified 3449
80 Ga0068864_100002051 3300005618 Bacteria 16634
81 Ga0068864_100015940 3300005618 Bacteria 6255
82 Ga0068864_100041968 3300005618 Unclassified 3914
83 Ga0068864_100063627 3300005618 Unclassified 3197
84 Ga0068866_10003424 3300005718 Bacteria 6502
85 Ga0068861_100015537 3300005719 Bacteria 5368
86 Ga0068861_100018556 3300005719 Bacteria 4955
87 Ga0068861_100053234 3300005719 Unclassified 3078
88 Ga0068851_10006712 3300005834 Bacteria 5264
89 Ga0068870_10003712 3300005840 Bacteria 6488
90 Ga0068870_10017001 3300005840 Unclassified 3490
91 Ga0068863_100020663 3300005841 Bacteria 6290
92 Ga0068863_100132209 3300005841 Unclassified 2382
93 Ga0068858_100033653 3300005842 Bacteria 4754
94 Ga0068858_100071403 3300005842 Unclassified 3220
95 Ga0068860_100025725 3300005843 Bacteria 5676
96 Ga0068860_100025977 3300005843 Bacteria 5650
97 Ga0068860_100036795 3300005843 Bacteria 4688
98 Ga0068860_100075741 3300005843 Unclassified 3201
99 Ga0068860_100076109 3300005843 Bacteria 3192
100 Ga0068862_100013843 3300005844 Bacteria 6685
101 Ga0068862_100058037 3300005844 Bacteria 3320
102 Ga0081539_10000502 3300005985 Bacteria 82098
103 Ga0081539_10000612 3300005985 Bacteria 72310
104 Ga0081539_10001231 3300005985 Bacteria 45721
105 Ga0081539_10001333 3300005985 Bacteria 43002
106 Ga0097621_100002613 3300006237 Bacteria 12337
107 Ga0097621_100012062 3300006237 Bacteria 6394
108 Ga0097621_100012234 3300006237 Bacteria 6351
109 Ga0068871_100002843 3300006358 Bacteria 11858
110 Ga0068871_100044910 3300006358 Unclassified 3555
111 Ga0075428_100153225 3300006844 Bacteria 2504
112 Ga0075431_100013609 3300006847 Bacteria 8220
113 Ga0075433_10012319 3300006852 Bacteria 6901
114 Ga0075433_10022902 3300006852 Bacteria 5250
115 Ga0097620_100002543 3300006931 Bacteria 18515
116 Ga0097620_100025098 3300006931 Bacteria 5982
117 Ga0097620_100040475 3300006931 Unclassified 4678
118 Ga0097620_100059559 3300006931 Unclassified 3847
119 Ga0097620_100073848 3300006931 Unclassified 3449
120 Ga0075435_100019574 3300007076 Bacteria 5174
121 Ga0105240_10108533 3300009093 Bacteria 3362
122 Ga0111539_10002599 3300009094 Bacteria 23915
123 Ga0111539_10008452 3300009094 Bacteria 13094
124 Ga0111539_10091907 3300009094 Bacteria 3566
125 Ga0105247_10005727 3300009101 Bacteria 7777
126 Ga0114129_10003316 3300009147 Bacteria 22613
127 Ga0114129_10024891 3300009147 Bacteria 8487
128 Ga0114129_10059891 3300009147 Bacteria 5323
129 Ga0114129_10073606 3300009147 Bacteria 4760
130 Ga0114129_10082228 3300009147 Bacteria 4475
131 Ga0105242_10009321 3300009176 Bacteria 7537
132 Ga0105242_10094353 3300009176 Unclassified 2524
133 Ga0105248_10002665 3300009177 Bacteria 19824
134 Ga0105248_10015032 3300009177 Bacteria 8522
135 Ga0105248_10016846 3300009177 Bacteria 8044
136 Ga0105237_10002216 3300009545 Bacteria 24329
137 Ga0105237_10018174 3300009545 Bacteria 7278
138 Ga0105238_10004301 3300009551 Bacteria 14132
139 Ga0105238_10058398 3300009551 Unclassified 3867
140 Ga0105249_10027282 3300009553 Bacteria 5152
141 Ga0105249_10062665 3300009553 Bacteria 3414
142 Ga0105246_10072365 3300011119 Bacteria 2430
143 Ga0157373_10027201 3300013100 Unclassified 4126
144 Ga0157373_10029631 3300013100 Bacteria 3941
145 Ga0157378_10002548 3300013297 Bacteria 16215
146 Ga0157378_10014311 3300013297 Bacteria 6946
147 Ga0157378_10018869 3300013297 Bacteria 6062
148 Ga0157378_10019209 3300013297 Bacteria 6006
149 Ga0163162_10000734 3300013306 Bacteria 30397
150 Ga0163162_10009896 3300013306 Bacteria 9271
151 Ga0163162_10046232 3300013306 Unclassified 4362
152 Ga0163162_10055757 3300013306 Bacteria 3980
153 Ga0163162_10063181 3300013306 Bacteria 3744
154 Ga0157372_10058188 3300013307 Bacteria 4320
155 Ga0157375_10059796 3300013308 Unclassified 3776
156 Ga0163163_10000934 3300014325 Bacteria 24788
157 Ga0163163_10001951 3300014325 Bacteria 17443
158 Ga0163163_10022163 3300014325 Bacteria 6009
159 Ga0163163_10068742 3300014325 Bacteria 3525
160 Ga0163163_10147961 3300014325 Unclassified 2393
161 Ga0157380_10000207 3300014326 Bacteria 34905
162 Ga0157380_10021774 3300014326 Bacteria 4814
163 Ga0157379_10087163 3300014968 Bacteria 2799
164 Ga0157376_10005032 3300014969 Bacteria 9217
165 Ga0157376_10006987 3300014969 Bacteria 8008
166 Ga0213876_10000033 3300021384 Bacteria 205318
167 Ga0213876_10016989 3300021384 Bacteria 3844
168 Ga0207697_10006162 3300025315 Bacteria 5472
169 Ga0207642_10004861 3300025899 Bacteria 4351
170 Ga0207710_10001268 3300025900 Bacteria 12753
171 Ga0207647_10005301 3300025904 Bacteria 9476
172 Ga0207643_10038105 3300025908 Unclassified 2699
173 Ga0207684_10000085 3300025910 Bacteria 175922
174 Ga0207684_10009660 3300025910 Bacteria 8508
175 Ga0207684_10042397 3300025910 Bacteria 3857
176 Ga0207707_10000016 3300025912 Bacteria 256002
177 Ga0207707_10101790 3300025912 Bacteria 2511
178 Ga0207671_10010573 3300025914 Bacteria 7597
179 Ga0207660_10002053 3300025917 Bacteria 13367
180 Ga0207662_10001801 3300025918 Bacteria 10515
181 Ga0207662_10012695 3300025918 Unclassified 4695
182 Ga0207662_10052194 3300025918 Unclassified 2433
183 Ga0207652_10000126 3300025921 Bacteria 82522
184 Ga0207652_10059963 3300025921 Unclassified 3281
185 Ga0207646_10069830 3300025922 Bacteria 3138
186 Ga0207681_10000395 3300025923 Bacteria 30526
187 Ga0207694_10001471 3300025924 Bacteria 20135
188 Ga0207650_10000011 3300025925 Bacteria 450115
189 Ga0207687_10026837 3300025927 Unclassified 3859
190 Ga0207644_10014651 3300025931 Bacteria 5251
191 Ga0207686_10004869 3300025934 Bacteria 7216
192 Ga0207709_10006884 3300025935 Bacteria 6363
193 Ga0207670_10002328 3300025936 Bacteria 9945
194 Ga0207704_10007726 3300025938 Bacteria 5099
195 Ga0207691_10006377 3300025940 Bacteria 11396
196 Ga0207691_10043413 3300025940 Bacteria 4144
197 Ga0207711_10002600 3300025941 Bacteria 16036
198 Ga0207711_10002913 3300025941 Bacteria 15003
199 Ga0207711_10013068 3300025941 Bacteria 6897
200 Ga0207689_10004678 3300025942 Bacteria 12353
201 Ga0207689_10005863 3300025942 Bacteria 10888
202 Ga0207689_10008973 3300025942 Bacteria 8664
203 Ga0207689_10063476 3300025942 Bacteria 3039
204 Ga0207689_10068109 3300025942 Unclassified 2925
205 Ga0207679_10004321 3300025945 Bacteria 8838
206 Ga0207679_10011076 3300025945 Bacteria 5823
207 Ga0207712_10008747 3300025961 Bacteria 6403
208 Ga0207712_10018034 3300025961 Bacteria 4592
209 Ga0207712_10091104 3300025961 Unclassified 2245
210 Ga0207640_10071658 3300025981 Bacteria 2335
211 Ga0207677_10052475 3300026023 Unclassified 2770
212 Ga0207703_10012859 3300026035 Bacteria 6527
213 Ga0207703_10023303 3300026035 Bacteria 4862
214 Ga0207639_10050238 3300026041 Unclassified 3166
215 Ga0207639_10088348 3300026041 Bacteria 2473
216 Ga0207639_10128590 3300026041 Bacteria 2093
217 Ga0207708_10000091 3300026075 Bacteria 71484
218 Ga0207708_10017306 3300026075 Bacteria 5426
219 Ga0207708_10035020 3300026075 Bacteria 3820
220 Ga0207648_10050109 3300026089 Bacteria 3652
221 Ga0207676_10002182 3300026095 Bacteria 14115
222 Ga0207676_10005227 3300026095 Bacteria 9186
223 Ga0207676_10010528 3300026095 Bacteria 6589
224 Ga0207676_10027615 3300026095 Bacteria 4229
225 Ga0207674_10000169 3300026116 Bacteria 78781
226 Ga0207674_10105927 3300026116 Bacteria 2789
227 Ga0207675_100001843 3300026118 Bacteria 21273
228 Ga0207675_100004607 3300026118 Bacteria 13286
229 Ga0268265_10011170 3300028380 Bacteria 6069
230 Ga0268264_10026379 3300028381 Bacteria 4747
231 Ga0268264_10059248 3300028381 Bacteria 3208
232 Ga0307513_10002098 3300031456 Bacteria 27997
233 Ga0307408_100004717 3300031548 Bacteria 9202
234 Ga0307408_100004985 3300031548 Bacteria 8916
235 Ga0307405_10009465 3300031731 Bacteria 4996
236 Ga0307410_10006574 3300031852 Bacteria 6285
237 Ga0307410_10025201 3300031852 Bacteria 3728
238 Ga0307406_10001737 3300031901 Bacteria 11948
239 Ga0307406_10035485 3300031901 Bacteria 3067
240 Ga0307406_10037973 3300031901 Bacteria 2979
241 Ga0307412_10002055 3300031911 Bacteria 11170
242 Ga0307409_100015289 3300031995 Bacteria 5030
243 Ga0307409_100019733 3300031995 Bacteria 4574
244 Ga0307416_100023916 3300032002 Bacteria 4446
245 Ga0307414_10000418 3300032004 Bacteria 22916
246 Ga0307415_100002620 3300032126 Bacteria 8959
247 Ga0307415_100019943 3300032126 Bacteria 4082
248 Ga0307415_100036845 3300032126 Bacteria 3209
249 Ga0395900_0134792 3300037418 Unclassified 2530
250 Ga0395898_0044163 3300037466 Bacteria 4390
251 Ga0395905_0027923 3300037471 Bacteria 5321
252 Ga0242420_000279 3300038996 Bacteria 5599
253 Ga0436365_0033194 3300039437 Bacteria 3614
254 Ga0436365_0198252 3300039437 Bacteria 179679
255 Ga0436365_1008175 3300039437 Bacteria 10626
256 Ga0439464_0008558 3300042439 Bacteria 2682
257 Ga0495663_0000097 3300046525 Bacteria 36409
258 Ga0495598_0000557 3300046537 Bacteria 6985
259 Ga0495621_0003865 3300046539 Bacteria 4161
260 Ga0496102_0134936 3300048905 Bacteria 2312
261 Ga0496106_0032204 3300048909 Unclassified 3909
262 Ga0496112_0058830 3300048915 Unclassified 3786
263 Ga0496112_0062053 3300048915 Unclassified 3686
264 Ga0501292_000560 3300049515 Bacteria 4593
265 Ga0501292_000901 3300049515 Unclassified 3617
266 Ga0501296_000309 3300049519 Bacteria 5030
267 Ga0501298_000185 3300049521 Bacteria 7784
268 Ga0501038_0017560 3300049574 Bacteria 6469
269 Ga0501198_000124 3300049649 Bacteria 12109
270 Ga0501207_000049 3300049654 Bacteria 8619
271 Ga0501207_000421 3300049654 Bacteria 4718
272 Ga0501216_003266 3300049660 Unclassified 2357
273 Ga0501217_000148 3300049661 Bacteria 9659
274 Ga0501217_000177 3300049661 Bacteria 9316
275 Ga0501217_002158 3300049661 Bacteria 3819
276 Ga0501217_003010 3300049661 Unclassified 3377
277 Ga0501223_005213 3300049663 Bacteria 2741
278 Ga0501224_000816 3300049664 Bacteria 3951
279 Ga0501227_000244 3300049665 Bacteria 11097
280 Ga0501233_000038 3300049668 Bacteria 17499
281 Ga0501240_000088 3300049673 Bacteria 5671
282 Ga0501243_001919 3300049675 Bacteria 3024
283 Ga0501259_000510 3300049688 Bacteria 6236
284 Ga0501225_0000349 3300049705 Bacteria 14610
285 Ga0501225_0002715 3300049705 Bacteria 5434
286 Ga0501225_0003059 3300049705 Bacteria 5110
287 Ga0501225_0007090 3300049705 Bacteria 3258
288 Ga0501229_000347 3300049706 Bacteria 5219
289 Ga0501234_000023 3300049707 Bacteria 16657
290 Ga0501204_000298 3300049850 Bacteria 4105
291 nmdc:mga05p37_19064_c1 3300050507 Bacteria 3685
292 nmdc:mga05p37_305020_c1 3300050507 Unclassified 1890
293 nmdc:mga08y16_144716_c1 3300050511 Unclassified 2471
294 nmdc:mga08y16_255416_c1 3300050511 Unclassified 1811
295 nmdc:mga08y16_7854_c1 3300050511 Bacteria 11169
296 nmdc:mga0n895_115938_c1 3300050512 Bacteria 2697
297 nmdc:mga0a205_3680_c1 3300050515 Bacteria 13725
298 nmdc:mga0a205_92863_c1 3300050515 Unclassified 2916
299 Ga0500616_0001488 3300053153 Bacteria 22216
300 Ga0068857_100006610
301 JGI24751J29686_10000059
302 JGI25406J46586_10001861
303 rootL2_10135102
304 Ga0065714_10064422
305 Ga0065704_10072006
306 Ga0065712_10000122
307 Ga0065712_10004647
308 Ga0065712_10014381
309 Ga0065715_10004777
310 Ga0065715_10010522
311 Ga0065715_10092583
312 Ga0065707_10001816
313 Ga0065707_10091523
314 Ga0070690_100000612
315 Ga0070690_100026389
316 Ga0070670_100057371
317 Ga0068869_100006262
318 Ga0068869_100085376
319 Ga0070680_100002905
320 Ga0070680_100004986
321 Ga0070682_100000112
322 Ga0070682_100056640
323 Ga0068868_100005161
324 Ga0070689_100004627
325 Ga0070687_100007607
326 Ga0070687_100032255
327 Ga0070692_10017881
328 Ga0070669_100002338
329 Ga0070669_100003575
330 Ga0070671_100001508
331 Ga0070671_100013718
332 Ga0070673_100113228
333 Ga0070688_100031314
334 Ga0070659_100007413
335 Ga0070705_100013010
336 Ga0070700_100000065
337 Ga0070700_100011225
338 Ga0070700_100042025
339 Ga0070700_100054391
340 Ga0070694_100031092
341 Ga0070708_100032294
342 Ga0070708_100045464
343 Ga0070681_10000089
344 Ga0070681_10062732
345 Ga0068867_100016731
346 Ga0068867_100021153
347 Ga0070706_100000555
348 Ga0070706_100024076
349 Ga0070706_100068603
350 Ga0070706_100080250
351 Ga0070707_100021034
352 Ga0070698_100005868
353 Ga0070698_100007364
354 Ga0070698_100010525
355 Ga0070698_100014915
356 Ga0070699_100023796
357 Ga0070679_100000014
358 Ga0070679_100061444
359 Ga0070697_100000160
360 Ga0070697_100001279
361 Ga0070697_100078034
362 Ga0070672_100015915
363 Ga0070686_100001858
364 Ga0070696_100011468
365 Ga0070693_100004768
366 Ga0070693_100013550
367 Ga0070704_100008216
368 Ga0070664_100001972
369 Ga0068854_100049371
370 Ga0068856_100063302
371 Ga0070702_100002731
372 Ga0070702_100012835
373 Ga0070702_100027047
374 Ga0068859_100002543
375 Ga0068859_100025095
376 Ga0068859_100040476
377 Ga0068859_100059561
378 Ga0068859_100073847
379 Ga0068864_100002051
380 Ga0068864_100015940
381 Ga0068864_100041968
382 Ga0068864_100063627
383 Ga0068866_10003424
384 Ga0068861_100015537
385 Ga0068861_100018556
386 Ga0068861_100053234
387 Ga0068851_10006712
388 Ga0068870_10003712
389 Ga0068870_10017001
390 Ga0068863_100020663
391 Ga0068863_100132209
392 Ga0068858_100033653
393 Ga0068858_100071403
394 Ga0068860_100025725
395 Ga0068860_100025977
396 Ga0068860_100036795
397 Ga0068860_100075741
398 Ga0068860_100076109
399 Ga0068862_100013843
400 Ga0068862_100058037
401 Ga0081539_10000502
402 Ga0081539_10000612
403 Ga0081539_10001231
404 Ga0081539_10001333
405 Ga0097621_100002613
406 Ga0097621_100012062
407 Ga0097621_100012234
408 Ga0068871_100002843
409 Ga0068871_100044910
410 Ga0075428_100153225
411 Ga0075431_100013609
412 Ga0075433_10012319
413 Ga0075433_10022902
414 Ga0097620_100002543
415 Ga0097620_100025098
416 Ga0097620_100040475
417 Ga0097620_100059559
418 Ga0097620_100073848
419 Ga0075435_100019574
420 Ga0105240_10108533
421 Ga0111539_10002599
422 Ga0111539_10008452
423 Ga0111539_10091907
424 Ga0105247_10005727
425 Ga0114129_10003316
426 Ga0114129_10024891
427 Ga0114129_10059891
428 Ga0114129_10073606
429 Ga0114129_10082228
430 Ga0105242_10009321
431 Ga0105242_10094353
432 Ga0105248_10002665
433 Ga0105248_10015032
434 Ga0105248_10016846
435 Ga0105237_10002216
436 Ga0105237_10018174
437 Ga0105238_10004301
438 Ga0105238_10058398
439 Ga0105249_10027282
440 Ga0105249_10062665
441 Ga0105246_10072365
442 Ga0157373_10027201
443 Ga0157373_10029631
444 Ga0157378_10002548
445 Ga0157378_10014311
446 Ga0157378_10018869
447 Ga0157378_10019209
448 Ga0163162_10000734
449 Ga0163162_10009896
450 Ga0163162_10046232
451 Ga0163162_10055757
452 Ga0163162_10063181
453 Ga0157372_10058188
454 Ga0157375_10059796
455 Ga0163163_10000934
456 Ga0163163_10001951
457 Ga0163163_10022163
458 Ga0163163_10068742
459 Ga0163163_10147961
460 Ga0157380_10000207
461 Ga0157380_10021774
462 Ga0157379_10087163
463 Ga0157376_10005032
464 Ga0157376_10006987
465 Ga0213876_10000033
466 Ga0213876_10016989
467 Ga0207697_10006162
468 Ga0207642_10004861
469 Ga0207710_10001268
470 Ga0207647_10005301
471 Ga0207643_10038105
472 Ga0207684_10000085
473 Ga0207684_10009660
474 Ga0207684_10042397
475 Ga0207707_10000016
476 Ga0207707_10101790
477 Ga0207671_10010573
478 Ga0207660_10002053
479 Ga0207662_10001801
480 Ga0207662_10012695
481 Ga0207662_10052194
482 Ga0207652_10000126
483 Ga0207652_10059963
484 Ga0207646_10069830
485 Ga0207681_10000395
486 Ga0207694_10001471
487 Ga0207650_10000011
488 Ga0207687_10026837
489 Ga0207644_10014651
490 Ga0207686_10004869
491 Ga0207709_10006884
492 Ga0207670_10002328
493 Ga0207704_10007726
494 Ga0207691_10006377
495 Ga0207691_10043413
496 Ga0207711_10002600
497 Ga0207711_10002913
498 Ga0207711_10013068
499 Ga0207689_10004678
500 Ga0207689_10005863
501 Ga0207689_10008973
502 Ga0207689_10063476
503 Ga0207689_10068109
504 Ga0207679_10004321
505 Ga0207679_10011076
506 Ga0207712_10008747
507 Ga0207712_10018034
508 Ga0207712_10091104
509 Ga0207640_10071658
510 Ga0207677_10052475
511 Ga0207703_10012859
512 Ga0207703_10023303
513 Ga0207639_10050238
514 Ga0207639_10088348
515 Ga0207639_10128590
516 Ga0207708_10000091
517 Ga0207708_10017306
518 Ga0207708_10035020
519 Ga0207648_10050109
520 Ga0207676_10002182
521 Ga0207676_10005227
522 Ga0207676_10010528
523 Ga0207676_10027615
524 Ga0207674_10000169
525 Ga0207674_10105927
526 Ga0207675_100001843
527 Ga0207675_100004607
528 Ga0268265_10011170
529 Ga0268264_10026379
530 Ga0268264_10059248
531 Ga0307513_10002098
532 Ga0307408_100004717
533 Ga0307408_100004985
534 Ga0307405_10009465
535 Ga0307410_10006574
536 Ga0307410_10025201
537 Ga0307406_10001737
538 Ga0307406_10035485
539 Ga0307406_10037973
540 Ga0307412_10002055
541 Ga0307409_100015289
542 Ga0307409_100019733
543 Ga0307416_100023916
544 Ga0307414_10000418
545 Ga0307415_100002620
546 Ga0307415_100019943
547 Ga0307415_100036845
548 Ga0395900_0134792
549 Ga0395898_0044163
550 Ga0395905_0027923
551 Ga0242420_000279
552 Ga0436365_0033194
553 Ga0436365_0198252
554 Ga0436365_1008175
555 Ga0439464_0008558
556 Ga0495663_0000097
557 Ga0495598_0000557
558 Ga0495621_0003865
559 Ga0496102_0134936
560 Ga0496106_0032204
561 Ga0496112_0058830
562 Ga0496112_0062053
563 Ga0501292_000560
564 Ga0501292_000901
565 Ga0501296_000309
566 Ga0501298_000185
567 Ga0501038_0017560
568 Ga0501198_000124
569 Ga0501207_000049
570 Ga0501207_000421
571 Ga0501216_003266
572 Ga0501217_000148
573 Ga0501217_000177
574 Ga0501217_002158
575 Ga0501217_003010
576 Ga0501223_005213
577 Ga0501224_000816
578 Ga0501227_000244
579 Ga0501233_000038
580 Ga0501240_000088
581 Ga0501243_001919
582 Ga0501259_000510
583 Ga0501225_0000349
584 Ga0501225_0002715
585 Ga0501225_0003059
586 Ga0501225_0007090
587 Ga0501229_000347
588 Ga0501234_000023
589 Ga0501204_000298
590 nmdc:mga05p37_19064_c1
591 nmdc:mga05p37_305020_c1
592 nmdc:mga08y16_144716_c1
593 nmdc:mga08y16_255416_c1
594 nmdc:mga08y16_7854_c1
595 nmdc:mga0n895_115938_c1
596 nmdc:mga0a205_3680_c1
597 nmdc:mga0a205_92863_c1
598 Ga0500616_0001488

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00905

Transpeptidase

Penicillin binding protein transpeptidase domain

286

630

0.92

PF03717

PBP_dimer

Penicillin-binding Protein dimerisation domain

75

252

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
7zg8-assembly2.cif.gz_BBB crystal structure of a. baumannii penicillin-binding protein 2 0.8959 68 635
7zg8-assembly2.cif.gz_BBB crystal structure of a. baumannii penicillin-binding protein 2 0.8942 68 635
6g9p-assembly1.cif.gz_A structural basis for the inhibition of e. coli pbp2 0.8653 64 626
6g9f-assembly1.cif.gz_A structural basis for the inhibition of e. coli pbp2 0.8609 64 626
3equ-assembly2.cif.gz_B crystal structure of penicillin-binding protein 2 from neisseria gonorrhoeae 0.8601 65 636
ID Description Score Start End Superfamily
5uy7A00 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8556 258 635 3.40.710.10
af_P0AD65_248_620_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8432 255 633 3.40.710.10
5uy7A00 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8405 258 635 3.40.710.10
4u3tA00 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8322 258 636 3.40.710.10
af_P0AD65_248_620_3.40.710.10 Alpha Beta;3-Layer(aba) Sandwich;Beta-lactamase;DD-peptidase/beta-lactamase superfamily 0.8282 255 633 3.40.710.10
ID Description Score Start End GO Terms
AF-A0A2V8PMH3-F1-model_v4 Penicillin-binding protein transpeptidase domain-containing protein 0.9013 391 654 GO:0005886
GO:0008360
GO:0008658
GO:0009252
GO:0071555
GO:0071972
AF-A0A1Y0GZV3-F1-model_v4 Beta-lactamase 0.8982 146 632 GO:0005886
GO:0008360
GO:0008658
GO:0009252
GO:0071555
GO:0071972
AF-A0A0G2A0J1-F1-model_v4 Cell elongation specific D,D-transpeptidase 0.8942 35 627 GO:0005886
GO:0008360
GO:0008658
GO:0009002
GO:0009252
GO:0071555
GO:0071972
AF-A0A3M1SU62-F1-model_v4 Penicillin-binding protein 2 0.8923 14 564 GO:0005886
GO:0008360
GO:0008658
GO:0009002
GO:0009252
GO:0071555
GO:0071972
AF-A0A7V5UDW1-F1-model_v4 Penicillin-binding protein 2 0.8912 171 639 GO:0005886
GO:0008360
GO:0008658
GO:0009002
GO:0009252
GO:0071555
GO:0071972

Map