F393883

General Info

Members Datasets Scaffolds Average Seq Length
297 182 594 449

Family's Representative Sequence

Representative Sequence 3300048088|Ga0495602_0051849|Ga0495602_0051849_275_1840
Length 521
Sequence MSTEVVEQVPLPAALSELRDSESSLRARQPPVDERIWPARPREPRAPVATRYTGEPMNDTLATAAADQNALSRSLRPRHVAMITIGGIIGAGLFVGSSVAIAAAGPAIIVSYALTGLLVLLVMRMLGEMAVDMPQVRSFTEFTRSALGNWAGFSVGWLYWYFWVVVIPVEAIAGAGIIQRWLPLPMWQIGTVLMLLMTCVNLMSARAYGEFEFWFSSIKVAAILSFIVVVGAHALGYRSPGGSTFSTLVAYGGFAPRGAFAVLAAVTTVIWSMMGAEVVTIAAAESPEPARAVARMTSTIITRILLFYVGSIFVIVSTVPWTHVVSGQSPFTLALDGIRFPYASEFMAAVILTAVLSCLNSSFYVASRVLFVLGSHGDAPRWLVRTNRRHVPARAVLLASAVGFAGVIAAILSPSVVFAFLVNASGAIIAVIYLAIAVSQVRSRRARERAGGPPPTLPMWLFPWLSYVAIAGMILVLVAMALTPSHRAEFWTSTISIAVALLAYVAFRRRATALPTTREAR

Samples

Sample ID Description Type Environment
1 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
5 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
6 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
13 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
14 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
22 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
23 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
24 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
25 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
30 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
31 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
32 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
33 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
34 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
35 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
36 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
39 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
40 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
41 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
42 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
50 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
51 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300009987 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_213 metaG Metagenome Rhizosphere
54 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
55 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
56 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
60 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
63 3300021441 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 Metagenome Rhizosphere
64 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028016 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE1 Metagenome Rhizosphere
92 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
96 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
97 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
98 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
99 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
100 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
101 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
102 3300031240 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-27 metaG Metagenome Rhizosphere
103 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
104 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
105 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
106 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
107 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
108 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
109 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
110 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
111 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
112 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
113 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
114 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
115 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
116 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
117 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
118 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
119 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
120 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
121 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
122 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
123 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
124 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
125 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
126 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
127 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
128 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
129 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
130 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
131 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
132 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
133 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
134 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
135 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
136 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
137 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
138 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
139 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
140 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
141 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
142 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
143 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
144 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
145 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
146 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
147 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
148 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
149 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
150 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
151 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
152 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
153 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
154 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
155 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
156 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
157 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
158 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
159 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
160 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
161 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
162 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
163 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
164 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
165 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
166 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
167 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
168 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
169 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
170 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
171 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
172 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
173 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
174 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
175 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
176 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
177 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
178 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
179 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
180 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
181 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
182 2919138771 Novosphingobium sp. 1748 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.99
Metatranscriptomes 0.67
Isolates 0.34

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.01
Nodule 0
Rhizoplane 7.41
Rhizosphere 82.49
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0495602_0051849 3300048088 Bacteria 3650
2 rootL2_10133122 3300003322 Bacteria 5517
3 rootH1_10049140 3300003323 Bacteria 5954
4 Ga0070666_10053485 3300005335 Bacteria 2723
5 Ga0070680_100119753 3300005336 Bacteria 2197
6 Ga0068868_100004771 3300005338 Bacteria 9519
7 Ga0070671_100046856 3300005355 Bacteria 3595
8 Ga0070671_100060650 3300005355 Bacteria 3149
9 Ga0070667_100013936 3300005367 Bacteria 6648
10 Ga0070667_100138616 3300005367 Bacteria 2128
11 Ga0070709_10002892 3300005434 Bacteria 9255
12 Ga0070709_10031243 3300005434 Bacteria 3203
13 Ga0070714_100029680 3300005435 Bacteria 4547
14 Ga0070714_100078592 3300005435 Bacteria 2868
15 Ga0070714_100119141 3300005435 Bacteria 2346
16 Ga0070713_100002413 3300005436 Bacteria 12196
17 Ga0070713_100144556 3300005436 Bacteria 2110
18 Ga0070710_10020103 3300005437 Bacteria 3460
19 Ga0070711_100000730 3300005439 Bacteria 17126
20 Ga0070705_100045645 3300005440 Bacteria 2522
21 Ga0070694_100142652 3300005444 Bacteria 1741
22 Ga0070678_100011390 3300005456 Bacteria 5484
23 Ga0070681_10009471 3300005458 Bacteria 9583
24 Ga0070681_10063028 3300005458 Bacteria 3680
25 Ga0070679_100139865 3300005530 Bacteria 2401
26 Ga0070679_100223778 3300005530 Bacteria 1842
27 Ga0070696_100001782 3300005546 Bacteria 14114
28 Ga0070665_100003750 3300005548 Bacteria 16091
29 Ga0070665_100017681 3300005548 Bacteria 7160
30 Ga0070665_100021659 3300005548 Bacteria 6464
31 Ga0070665_100029709 3300005548 Bacteria 5500
32 Ga0068855_100000869 3300005563 Bacteria 37546
33 Ga0068855_100000938 3300005563 Bacteria 36318
34 Ga0068856_100007667 3300005614 Bacteria 10531
35 Ga0068859_100002382 3300005617 Bacteria 19151
36 Ga0068859_100024067 3300005617 Bacteria 6111
37 Ga0068859_100190023 3300005617 Bacteria 2138
38 Ga0068866_10001546 3300005718 Bacteria 9772
39 Ga0068863_100002955 3300005841 Bacteria 16795
40 Ga0068863_100008471 3300005841 Bacteria 10043
41 Ga0068863_100015651 3300005841 Bacteria 7284
42 Ga0068863_100032862 3300005841 Bacteria 4943
43 Ga0068863_100107023 3300005841 Bacteria 2661
44 Ga0068858_100000100 3300005842 Bacteria 89377
45 Ga0068858_100003274 3300005842 Bacteria 16136
46 Ga0068858_100025622 3300005842 Bacteria 5487
47 Ga0068860_100000098 3300005843 Bacteria 145516
48 Ga0068862_100072446 3300005844 Bacteria 2976
49 Ga0070717_10024984 3300006028 Bacteria 4746
50 Ga0070715_10017686 3300006163 Bacteria 2703
51 Ga0070715_10046599 3300006163 Bacteria 1844
52 Ga0070716_100038092 3300006173 Bacteria 2660
53 Ga0070716_100050903 3300006173 Bacteria 2353
54 Ga0070712_100016796 3300006175 Bacteria 4733
55 Ga0070712_100100977 3300006175 Bacteria 2133
56 Ga0097621_100036727 3300006237 Bacteria 3920
57 Ga0097621_100173877 3300006237 Bacteria 1858
58 Ga0068871_100144166 3300006358 Bacteria 2027
59 Ga0075428_100107499 3300006844 Bacteria 3041
60 Ga0075433_10000419 3300006852 Bacteria 27125
61 Ga0075434_100003251 3300006871 Bacteria 14513
62 Ga0068865_100007247 3300006881 Bacteria 6813
63 Ga0097620_100002382 3300006931 Bacteria 19151
64 Ga0097620_100024068 3300006931 Bacteria 6111
65 Ga0097620_100190009 3300006931 Bacteria 2138
66 Ga0099794_10006769 3300007265 Bacteria 4663
67 Ga0099794_10024396 3300007265 Bacteria 2776
68 Ga0099795_10000040 3300007788 Bacteria 32398
69 Ga0099795_10000334 3300007788 Bacteria 8457
70 Ga0105250_10020905 3300009092 Bacteria 2643
71 Ga0105240_10001826 3300009093 Bacteria 35711
72 Ga0105240_10004983 3300009093 Bacteria 19949
73 Ga0105240_10036362 3300009093 Bacteria 6337
74 Ga0105240_10036471 3300009093 Bacteria 6324
75 Ga0105240_10080318 3300009093 Bacteria 4011
76 Ga0105240_10214914 3300009093 Bacteria 2244
77 Ga0105240_10236478 3300009093 Bacteria 2120
78 Ga0111539_10004649 3300009094 Bacteria 17936
79 Ga0105245_10004317 3300009098 Bacteria 12583
80 Ga0105247_10000144 3300009101 Bacteria 69830
81 Ga0105247_10029173 3300009101 Bacteria 3342
82 Ga0105247_10045401 3300009101 Bacteria 2695
83 Ga0114129_10537413 3300009147 Bacteria 1522
84 Ga0105242_10005469 3300009176 Bacteria 9810
85 Ga0105248_10009482 3300009177 Bacteria 10714
86 Ga0105248_10010029 3300009177 Bacteria 10430
87 Ga0105248_10119709 3300009177 Bacteria 2970
88 Ga0105248_10269667 3300009177 Bacteria 1917
89 Ga0105237_10019325 3300009545 Bacteria 7038
90 Ga0105237_10020616 3300009545 Bacteria 6792
91 Ga0105237_10039713 3300009545 Bacteria 4749
92 Ga0105237_10222431 3300009545 Bacteria 1888
93 Ga0105238_10103139 3300009551 Bacteria 2834
94 Ga0105238_10327603 3300009551 Bacteria 1518
95 Ga0105249_10036208 3300009553 Bacteria 4478
96 Ga0105249_10144446 3300009553 Bacteria 2285
97 Ga0105030_100793 3300009987 Bacteria 2815
98 Ga0099796_10000069 3300010159 Bacteria 18280
99 Ga0105239_10003663 3300010375 Bacteria 18768
100 Ga0105239_10028631 3300010375 Bacteria 6125
101 Ga0105239_10050745 3300010375 Bacteria 4549
102 Ga0157369_10003825 3300013105 Bacteria 17878
103 Ga0157369_10014075 3300013105 Bacteria 9039
104 Ga0163162_10028616 3300013306 Bacteria 5515
105 Ga0163162_10059009 3300013306 Bacteria 3868
106 Ga0163162_10108892 3300013306 Bacteria 2867
107 Ga0163162_10223760 3300013306 Bacteria 2011
108 Ga0157375_10004411 3300013308 Bacteria 12217
109 Ga0163163_10003916 3300014325 Bacteria 12699
110 Ga0163163_10067536 3300014325 Bacteria 3555
111 Ga0157380_10021104 3300014326 Bacteria 4881
112 Ga0157380_10031173 3300014326 Bacteria 4091
113 Ga0157379_10009792 3300014968 Bacteria 8350
114 Ga0157379_10067953 3300014968 Bacteria 3186
115 Ga0157376_10009966 3300014969 Bacteria 6933
116 Ga0213871_10001758 3300021441 Bacteria 3765
117 Ga0207696_1035701 3300025711 Bacteria 1478
118 Ga0207692_10028534 3300025898 Bacteria 2641
119 Ga0207710_10000269 3300025900 Bacteria 42868
120 Ga0207710_10008126 3300025900 Bacteria 4430
121 Ga0207685_10002246 3300025905 Bacteria 4376
122 Ga0207699_10004143 3300025906 Bacteria 6942
123 Ga0207707_10053004 3300025912 Bacteria 3531
124 Ga0207707_10056235 3300025912 Bacteria 3423
125 Ga0207695_10046411 3300025913 Bacteria 4605
126 Ga0207695_10053721 3300025913 Bacteria 4211
127 Ga0207695_10092258 3300025913 Bacteria 3039
128 Ga0207695_10106713 3300025913 Bacteria 2787
129 Ga0207671_10010961 3300025914 Bacteria 7427
130 Ga0207671_10056767 3300025914 Bacteria 2901
131 Ga0207693_10000059 3300025915 Bacteria 94053
132 Ga0207693_10048787 3300025915 Bacteria 3325
133 Ga0207693_10145089 3300025915 Bacteria 1866
134 Ga0207663_10031002 3300025916 Bacteria 3159
135 Ga0207652_10088161 3300025921 Bacteria 2722
136 Ga0207694_10049357 3300025924 Bacteria 3258
137 Ga0207700_10055199 3300025928 Bacteria 2985
138 Ga0207664_10103009 3300025929 Bacteria 2361
139 Ga0207644_10001192 3300025931 Bacteria 16735
140 Ga0207644_10080983 3300025931 Bacteria 2398
141 Ga0207644_10085356 3300025931 Bacteria 2342
142 Ga0207665_10010766 3300025939 Bacteria 6004
143 Ga0207665_10070070 3300025939 Bacteria 2392
144 Ga0207711_10017759 3300025941 Bacteria 5910
145 Ga0207667_10002555 3300025949 Bacteria 22643
146 Ga0207667_10008663 3300025949 Bacteria 12060
147 Ga0207712_10007356 3300025961 Bacteria 6952
148 Ga0207658_10003380 3300025986 Bacteria 11292
149 Ga0207677_10027174 3300026023 Bacteria 3599
150 Ga0207703_10000801 3300026035 Bacteria 30991
151 Ga0207703_10001680 3300026035 Bacteria 19905
152 Ga0207639_10049768 3300026041 Bacteria 3179
153 Ga0207678_10009682 3300026067 Bacteria 8477
154 Ga0207641_10000076 3300026088 Bacteria 145031
155 Ga0207641_10000273 3300026088 Bacteria 65757
156 Ga0207641_10011361 3300026088 Bacteria 7307
157 Ga0207683_10008035 3300026121 Bacteria 9021
158 Ga0209179_1000049 3300027512 Bacteria 23231
159 Ga0209179_1002456 3300027512 Bacteria 2510
160 Ga0265354_1000553 3300028016 Bacteria 6407
161 Ga0268266_10001411 3300028379 Bacteria 28670
162 Ga0268266_10004135 3300028379 Bacteria 14017
163 Ga0268266_10097197 3300028379 Bacteria 2589
164 Ga0268265_10010221 3300028380 Bacteria 6337
165 Ga0268264_10000129 3300028381 Bacteria 182988
166 Ga0268264_10000151 3300028381 Bacteria 158241
167 Ga0268264_10002976 3300028381 Bacteria 14708
168 Ga0268264_10090653 3300028381 Bacteria 2635
169 Ga0265318_10002965 3300028577 Bacteria 8782
170 Ga0265338_10011883 3300028800 Bacteria 9998
171 Ga0265338_10114119 3300028800 Bacteria 2168
172 Ga0307511_10000013 3300030521 Bacteria 127687
173 Ga0265760_10000321 3300031090 Bacteria 13333
174 Ga0265760_10016351 3300031090 Bacteria 2129
175 Ga0265330_10021285 3300031235 Bacteria 2961
176 Ga0265332_10030466 3300031238 Bacteria 2357
177 Ga0265328_10007046 3300031239 Bacteria 4714
178 Ga0265328_10024740 3300031239 Bacteria 2265
179 Ga0265320_10009471 3300031240 Bacteria 5873
180 Ga0265329_10007980 3300031242 Bacteria 4052
181 Ga0265331_10037857 3300031250 Bacteria 2360
182 Ga0265316_10103708 3300031344 Bacteria 2159
183 Ga0307509_10000002 3300031507 Bacteria 607551
184 Ga0307516_10000641 3300031730 Bacteria 47311
185 Ga0307413_10025640 3300031824 Bacteria 3235
186 Ga0307407_10004164 3300031903 Bacteria 6094
187 Ga0307510_10000003 3300033180 Bacteria 756654
188 Ga0307510_10015386 3300033180 Bacteria 9045
189 Ga0373954_0095092 3300035118 Bacteria 1434
190 Ga0373956_0081841 3300035119 Bacteria 1482
191 Ga0373946_0050013 3300035171 Bacteria 1745
192 Ga0373927_0004888 3300035695 Bacteria 9314
193 Ga0373927_0102526 3300035695 Bacteria 1862
194 Ga0373933_0040319 3300035724 Bacteria 2751
195 Ga0373937_0014797 3300036401 Bacteria 6889
196 Ga0373937_0043244 3300036401 Bacteria 4111
197 Ga0373925_0055955 3300037068 Bacteria 2954
198 Ga0395900_0362732 3300037418 Bacteria 1420
199 Ga0395898_0128625 3300037466 Bacteria 2426
200 Ga0395905_0130298 3300037471 Bacteria 2366
201 Ga0436360_0469727 3300039438 Bacteria 15598
202 Ga0436360_1110506 3300039438 Bacteria 2941
203 Ga0436360_1192169 3300039438 Bacteria 1814
204 Ga0436361_0478129 3300039447 Bacteria 2542
205 Ga0436361_0747210 3300039447 Bacteria 3382
206 Ga0436363_1094787 3300039450 Bacteria 11247
207 Ga0436363_1258320 3300039450 Bacteria 3899
208 Ga0436363_1297975 3300039450 Bacteria 5743
209 Ga0436362_0285325 3300039453 Bacteria 2287
210 Ga0451577_0009546 3300042876 Bacteria 9333
211 Ga0451577_0051979 3300042876 Bacteria 3658
212 Ga0466969_0000848 3300044656 Bacteria 16567
213 Ga0466969_0001331 3300044656 Bacteria 13339
214 Ga0466969_0072064 3300044656 Bacteria 1660
215 Ga0466972_0034861 3300044658 Bacteria 2464
216 Ga0466966_0002077 3300044684 Bacteria 12990
217 Ga0466963_0177133 3300044694 Bacteria 1488
218 Ga0466964_0000149 3300044706 Bacteria 18838
219 Ga0453684_0021261 3300044712 Bacteria 9709
220 Ga0453684_0051694 3300044712 Bacteria 5383
221 Ga0453684_0092678 3300044712 Bacteria 3723
222 Ga0466971_0000098 3300044719 Bacteria 31871
223 Ga0466970_0001148 3300044765 Bacteria 12837
224 Ga0466970_0008202 3300044765 Bacteria 5246
225 Ga0466957_0013870 3300044842 Bacteria 4685
226 Ga0466957_0095589 3300044842 Bacteria 1866
227 Ga0466959_0005925 3300045049 Bacteria 8421
228 Ga0466959_0007469 3300045049 Bacteria 7671
229 Ga0466959_0025779 3300045049 Bacteria 4360
230 Ga0466959_0051900 3300045049 Bacteria 3005
231 Ga0451576_0013217 3300045051 Bacteria 9238
232 Ga0451576_0262734 3300045051 Bacteria 1804
233 Ga0495629_0127247 3300046459 Bacteria 1775
234 Ga0495580_0000664 3300046472 Bacteria 29287
235 Ga0495582_0037729 3300046473 Bacteria 2658
236 Ga0495630_0153685 3300046517 Bacteria 1751
237 Ga0495586_0097165 3300046535 Bacteria 1632
238 Ga0495671_0049805 3300046692 Bacteria 2087
239 Ga0495649_0088127 3300046694 Bacteria 1656
240 Ga0495672_0069400 3300047320 Bacteria 2001
241 Ga0495687_018947 3300047443 Bacteria 3389
242 Ga0496100_0029101 3300048903 Bacteria 3414
243 Ga0496100_0049115 3300048903 Bacteria 2726
244 Ga0496101_0051721 3300048904 Bacteria 2961
245 Ga0496102_0007990 3300048905 Bacteria 9040
246 Ga0496102_0011756 3300048905 Bacteria 7555
247 Ga0496102_0013641 3300048905 Bacteria 7043
248 Ga0496102_0023989 3300048905 Bacteria 5422
249 Ga0496102_0024522 3300048905 Bacteria 5364
250 Ga0496104_0001547 3300048907 Bacteria 19822
251 Ga0496104_0062764 3300048907 Bacteria 3523
252 Ga0496105_0005832 3300048908 Bacteria 9394
253 Ga0496107_0002714 3300048910 Bacteria 11607
254 Ga0496108_0166079 3300048911 Bacteria 1908
255 Ga0496109_0012400 3300048912 Bacteria 7359
256 Ga0496110_0012033 3300048913 Bacteria 7108
257 Ga0496110_0030137 3300048913 Bacteria 4675
258 Ga0496111_0000693 3300048914 Bacteria 17777
259 Ga0496111_0015543 3300048914 Bacteria 5227
260 Ga0496114_0023084 3300048917 Bacteria 5071
261 Ga0496114_0029910 3300048917 Bacteria 4478
262 Ga0496115_0005665 3300048918 Bacteria 9088
263 Ga0496115_0016029 3300048918 Bacteria 5698
264 Ga0496117_0000186 3300048920 Bacteria 127231
265 Ga0496118_0000003 3300048921 Bacteria 773148
266 Ga0496119_0000260 3300048922 Bacteria 74908
267 Ga0496119_0005689 3300048922 Bacteria 11822
268 Ga0496120_0000061 3300048923 Bacteria 172817
269 Ga0496120_0046426 3300048923 Bacteria 2510
270 Ga0496121_0000405 3300048924 Bacteria 85880
271 Ga0496121_0010359 3300048924 Bacteria 10529
272 Ga0496121_0015797 3300048924 Bacteria 7861
273 Ga0496124_0010417 3300048927 Bacteria 9411
274 Ga0496125_0001701 3300048928 Bacteria 30700
275 Ga0496125_0014370 3300048928 Bacteria 7714
276 Ga0496125_0029143 3300048928 Bacteria 4967
277 Ga0496126_0005917 3300048929 Bacteria 13788
278 Ga0496126_0017211 3300048929 Bacteria 7206
279 Ga0496126_0021122 3300048929 Bacteria 6366
280 Ga0496126_0029285 3300048929 Bacteria 5232
281 Ga0501067_0054218 3300049583 Bacteria 2221
282 Ga0501073_0004378 3300049589 Bacteria 10604
283 Ga0501076_0155689 3300049592 Bacteria 1860
284 Ga0501077_0021344 3300049593 Bacteria 4097
285 Ga0501079_0046824 3300049741 Bacteria 3337
286 Ga0501045_0070471 3300049824 Bacteria 2572
287 nmdc:mga05p37_435560_c1 3300050507 Bacteria 1522
288 nmdc:mga08y16_14080_c1 3300050511 Bacteria 8420
289 nmdc:mga0n895_3225_c1 3300050512 Bacteria 13069
290 nmdc:mga0a205_14094_c1 3300050515 Bacteria 7460
291 Ga0500641_0028556 3300053096 Bacteria 2180
292 Ga0500559_0034189 3300053136 Bacteria 2192
293 Ga0500645_011692 3300053730 Bacteria 2857
294 Ga0501084_0035447 3300054114 Bacteria 4171
295 Ga0501082_0001120 3300060353 Bacteria 23668
296 Ga0466962_0003733 3300061719 Bacteria 7266
297 2919139777 2919138771 Bacteria 5281312
298 Ga0495602_0051849
299 rootL2_10133122
300 rootH1_10049140
301 Ga0070666_10053485
302 Ga0070680_100119753
303 Ga0068868_100004771
304 Ga0070671_100046856
305 Ga0070671_100060650
306 Ga0070667_100013936
307 Ga0070667_100138616
308 Ga0070709_10002892
309 Ga0070709_10031243
310 Ga0070714_100029680
311 Ga0070714_100078592
312 Ga0070714_100119141
313 Ga0070713_100002413
314 Ga0070713_100144556
315 Ga0070710_10020103
316 Ga0070711_100000730
317 Ga0070705_100045645
318 Ga0070694_100142652
319 Ga0070678_100011390
320 Ga0070681_10009471
321 Ga0070681_10063028
322 Ga0070679_100139865
323 Ga0070679_100223778
324 Ga0070696_100001782
325 Ga0070665_100003750
326 Ga0070665_100017681
327 Ga0070665_100021659
328 Ga0070665_100029709
329 Ga0068855_100000869
330 Ga0068855_100000938
331 Ga0068856_100007667
332 Ga0068859_100002382
333 Ga0068859_100024067
334 Ga0068859_100190023
335 Ga0068866_10001546
336 Ga0068863_100002955
337 Ga0068863_100008471
338 Ga0068863_100015651
339 Ga0068863_100032862
340 Ga0068863_100107023
341 Ga0068858_100000100
342 Ga0068858_100003274
343 Ga0068858_100025622
344 Ga0068860_100000098
345 Ga0068862_100072446
346 Ga0070717_10024984
347 Ga0070715_10017686
348 Ga0070715_10046599
349 Ga0070716_100038092
350 Ga0070716_100050903
351 Ga0070712_100016796
352 Ga0070712_100100977
353 Ga0097621_100036727
354 Ga0097621_100173877
355 Ga0068871_100144166
356 Ga0075428_100107499
357 Ga0075433_10000419
358 Ga0075434_100003251
359 Ga0068865_100007247
360 Ga0097620_100002382
361 Ga0097620_100024068
362 Ga0097620_100190009
363 Ga0099794_10006769
364 Ga0099794_10024396
365 Ga0099795_10000040
366 Ga0099795_10000334
367 Ga0105250_10020905
368 Ga0105240_10001826
369 Ga0105240_10004983
370 Ga0105240_10036362
371 Ga0105240_10036471
372 Ga0105240_10080318
373 Ga0105240_10214914
374 Ga0105240_10236478
375 Ga0111539_10004649
376 Ga0105245_10004317
377 Ga0105247_10000144
378 Ga0105247_10029173
379 Ga0105247_10045401
380 Ga0114129_10537413
381 Ga0105242_10005469
382 Ga0105248_10009482
383 Ga0105248_10010029
384 Ga0105248_10119709
385 Ga0105248_10269667
386 Ga0105237_10019325
387 Ga0105237_10020616
388 Ga0105237_10039713
389 Ga0105237_10222431
390 Ga0105238_10103139
391 Ga0105238_10327603
392 Ga0105249_10036208
393 Ga0105249_10144446
394 Ga0105030_100793
395 Ga0099796_10000069
396 Ga0105239_10003663
397 Ga0105239_10028631
398 Ga0105239_10050745
399 Ga0157369_10003825
400 Ga0157369_10014075
401 Ga0163162_10028616
402 Ga0163162_10059009
403 Ga0163162_10108892
404 Ga0163162_10223760
405 Ga0157375_10004411
406 Ga0163163_10003916
407 Ga0163163_10067536
408 Ga0157380_10021104
409 Ga0157380_10031173
410 Ga0157379_10009792
411 Ga0157379_10067953
412 Ga0157376_10009966
413 Ga0213871_10001758
414 Ga0207696_1035701
415 Ga0207692_10028534
416 Ga0207710_10000269
417 Ga0207710_10008126
418 Ga0207685_10002246
419 Ga0207699_10004143
420 Ga0207707_10053004
421 Ga0207707_10056235
422 Ga0207695_10046411
423 Ga0207695_10053721
424 Ga0207695_10092258
425 Ga0207695_10106713
426 Ga0207671_10010961
427 Ga0207671_10056767
428 Ga0207693_10000059
429 Ga0207693_10048787
430 Ga0207693_10145089
431 Ga0207663_10031002
432 Ga0207652_10088161
433 Ga0207694_10049357
434 Ga0207700_10055199
435 Ga0207664_10103009
436 Ga0207644_10001192
437 Ga0207644_10080983
438 Ga0207644_10085356
439 Ga0207665_10010766
440 Ga0207665_10070070
441 Ga0207711_10017759
442 Ga0207667_10002555
443 Ga0207667_10008663
444 Ga0207712_10007356
445 Ga0207658_10003380
446 Ga0207677_10027174
447 Ga0207703_10000801
448 Ga0207703_10001680
449 Ga0207639_10049768
450 Ga0207678_10009682
451 Ga0207641_10000076
452 Ga0207641_10000273
453 Ga0207641_10011361
454 Ga0207683_10008035
455 Ga0209179_1000049
456 Ga0209179_1002456
457 Ga0265354_1000553
458 Ga0268266_10001411
459 Ga0268266_10004135
460 Ga0268266_10097197
461 Ga0268265_10010221
462 Ga0268264_10000129
463 Ga0268264_10000151
464 Ga0268264_10002976
465 Ga0268264_10090653
466 Ga0265318_10002965
467 Ga0265338_10011883
468 Ga0265338_10114119
469 Ga0307511_10000013
470 Ga0265760_10000321
471 Ga0265760_10016351
472 Ga0265330_10021285
473 Ga0265332_10030466
474 Ga0265328_10007046
475 Ga0265328_10024740
476 Ga0265320_10009471
477 Ga0265329_10007980
478 Ga0265331_10037857
479 Ga0265316_10103708
480 Ga0307509_10000002
481 Ga0307516_10000641
482 Ga0307413_10025640
483 Ga0307407_10004164
484 Ga0307510_10000003
485 Ga0307510_10015386
486 Ga0373954_0095092
487 Ga0373956_0081841
488 Ga0373946_0050013
489 Ga0373927_0004888
490 Ga0373927_0102526
491 Ga0373933_0040319
492 Ga0373937_0014797
493 Ga0373937_0043244
494 Ga0373925_0055955
495 Ga0395900_0362732
496 Ga0395898_0128625
497 Ga0395905_0130298
498 Ga0436360_0469727
499 Ga0436360_1110506
500 Ga0436360_1192169
501 Ga0436361_0478129
502 Ga0436361_0747210
503 Ga0436363_1094787
504 Ga0436363_1258320
505 Ga0436363_1297975
506 Ga0436362_0285325
507 Ga0451577_0009546
508 Ga0451577_0051979
509 Ga0466969_0000848
510 Ga0466969_0001331
511 Ga0466969_0072064
512 Ga0466972_0034861
513 Ga0466966_0002077
514 Ga0466963_0177133
515 Ga0466964_0000149
516 Ga0453684_0021261
517 Ga0453684_0051694
518 Ga0453684_0092678
519 Ga0466971_0000098
520 Ga0466970_0001148
521 Ga0466970_0008202
522 Ga0466957_0013870
523 Ga0466957_0095589
524 Ga0466959_0005925
525 Ga0466959_0007469
526 Ga0466959_0025779
527 Ga0466959_0051900
528 Ga0451576_0013217
529 Ga0451576_0262734
530 Ga0495629_0127247
531 Ga0495580_0000664
532 Ga0495582_0037729
533 Ga0495630_0153685
534 Ga0495586_0097165
535 Ga0495671_0049805
536 Ga0495649_0088127
537 Ga0495672_0069400
538 Ga0495687_018947
539 Ga0496100_0029101
540 Ga0496100_0049115
541 Ga0496101_0051721
542 Ga0496102_0007990
543 Ga0496102_0011756
544 Ga0496102_0013641
545 Ga0496102_0023989
546 Ga0496102_0024522
547 Ga0496104_0001547
548 Ga0496104_0062764
549 Ga0496105_0005832
550 Ga0496107_0002714
551 Ga0496108_0166079
552 Ga0496109_0012400
553 Ga0496110_0012033
554 Ga0496110_0030137
555 Ga0496111_0000693
556 Ga0496111_0015543
557 Ga0496114_0023084
558 Ga0496114_0029910
559 Ga0496115_0005665
560 Ga0496115_0016029
561 Ga0496117_0000186
562 Ga0496118_0000003
563 Ga0496119_0000260
564 Ga0496119_0005689
565 Ga0496120_0000061
566 Ga0496120_0046426
567 Ga0496121_0000405
568 Ga0496121_0010359
569 Ga0496121_0015797
570 Ga0496124_0010417
571 Ga0496125_0001701
572 Ga0496125_0014370
573 Ga0496125_0029143
574 Ga0496126_0005917
575 Ga0496126_0017211
576 Ga0496126_0021122
577 Ga0496126_0029285
578 Ga0501067_0054218
579 Ga0501073_0004378
580 Ga0501076_0155689
581 Ga0501077_0021344
582 Ga0501079_0046824
583 Ga0501045_0070471
584 nmdc:mga05p37_435560_c1
585 nmdc:mga08y16_14080_c1
586 nmdc:mga0n895_3225_c1
587 nmdc:mga0a205_14094_c1
588 Ga0500641_0028556
589 Ga0500559_0034189
590 Ga0500645_011692
591 Ga0501084_0035447
592 Ga0501082_0001120
593 Ga0466962_0003733
594 2919139777

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00324

AA_permease

Amino acid permease

79

512

0.93

PF13520

AA_permease_2

Amino acid permease

75

507

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
6f2g-assembly1.cif.gz_A bacterial asc transporter crystal structure in open to in conformation 0.8578 42 471
6f34-assembly1.cif.gz_A crystal structure of a bacterial cationic amino acid transporter (cat) homologue bound to arginine. 0.8562 40 468
5oqt-assembly1.cif.gz_A crystal structure of a bacterial cationic amino acid transporter (cat) homologue 0.8469 40 468
7p9v-assembly1.cif.gz_B cryo em structure of system xc- 0.8449 40 469
7nf6-assembly1.cif.gz_B ovine b0,+at-rbat heterodimer 0.8403 42 468
ID Description Score Start End Superfamily
af_Q47689_10_465_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9366 35 469 1.20.1740.10
af_P24207_19_458_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9273 40 471 1.20.1740.10
af_L7N6B9_1_429_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9213 45 473 1.20.1740.10
af_L7N6B9_1_429_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9131 45 473 1.20.1740.10
af_P24207_19_458_1.20.1740.10 Mainly Alpha;Up-down Bundle;Amino acid/polyamine transporter I;Amino acid/polyamine transporter I 0.9093 40 471 1.20.1740.10
ID Description Score Start End GO Terms
AF-A0A117UXF9-F1-model_v4 GABA permease 0.9697 45 474 GO:0016020
GO:0055085
AF-A0A117UXF9-F1-model_v4 GABA permease 0.9609 45 474 GO:0016020
GO:0055085
AF-A0A6L3W3C9-F1-model_v4 deleted 0.9309 47 476
AF-A0A6G4TTH4-F1-model_v4 Amino acid permease 0.9269 45 478 GO:0006865
GO:0016020
GO:0055085
AF-A0A2S9BZT4-F1-model_v4 deleted 0.9183 46 476

Map