F393105

General Info

Members Datasets Scaffolds Average Seq Length
296 169 592 362

Family's Representative Sequence

Representative Sequence 3300006051|Ga0075364_10080643|Ga0075364_100806432
Length 350
Sequence MFDRHDLAEMELTELEQALEAMGHARFHGRQVFQWLHKRGVTGFSEMTDLGRDLRTALDAAFRVSTPDVVRRETSSDGTTKFLLRLEDGHLIESVYIPDTPAQTFCVSTQVGCAMKCGFCLTGKMGIVRNLTAGEIAGQVRVLARELGMLHSRFNIVLMGMGEPLHNYDGVMKALRMLADEHGLAVSPRRVTLSTVGVLPNLERLAISLHATTEEQRDLLVPINRKYGLKELLDACRRFPVKRRERITFEYVMLKDVNDSDEDARRLVRLLNGIKAKVNLLPLNEAPGIPYERPSDARVNRFAQIVAERGVVISVRKSRGRDIRAACGQLITESTRQSPGQRLASLMPIA

Samples

Sample ID Description Type Environment
1 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
22 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
23 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
24 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
31 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
38 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
41 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
42 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
43 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
46 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
47 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
48 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
55 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
56 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
57 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
58 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
59 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
60 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
90 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
91 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
92 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
93 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
94 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
95 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
96 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
97 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
98 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
99 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
100 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
101 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
102 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
103 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
104 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
105 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
106 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
107 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
108 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
109 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
110 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
111 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
112 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
113 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
114 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
115 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
116 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
117 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
118 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
119 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
120 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
121 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
122 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
123 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
124 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
125 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
126 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
127 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
128 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
129 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
130 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
132 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
138 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
139 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
140 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
141 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
142 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
143 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
144 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
145 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
146 3300049655 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J5_B_0_drought Metagenome Rhizosphere
147 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
148 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
149 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
150 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
151 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
152 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
153 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
154 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
155 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
156 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
157 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
158 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
159 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
160 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
161 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
162 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
163 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
164 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
165 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
166 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
167 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
168 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
169 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.72
Nodule 0
Rhizoplane 7.77
Rhizosphere 88.51
Stem 0
Stem Tuber 0
Unclassified 0.68

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0075364_10080643 3300006051 Bacteria 2151
2 Ga0065712_10082382 3300005290 Bacteria 2921
3 Ga0065712_10086966 3300005290 Bacteria 2595
4 Ga0065715_10120289 3300005293 Bacteria 2262
5 Ga0065715_10208127 3300005293 Bacteria 1327
6 Ga0065707_10083231 3300005295 Bacteria 9906
7 Ga0065707_10136066 3300005295 Bacteria 1840
8 Ga0070676_10095595 3300005328 Bacteria 1827
9 Ga0070683_100000219 3300005329 Bacteria 39225
10 Ga0070683_100126288 3300005329 Bacteria 2418
11 Ga0070670_100007985 3300005331 Bacteria 9001
12 Ga0070670_100090660 3300005331 Bacteria 2627
13 Ga0070677_10038647 3300005333 Bacteria 1869
14 Ga0070666_10101720 3300005335 Bacteria 1981
15 Ga0070689_100056543 3300005340 Bacteria 3042
16 Ga0070661_100012651 3300005344 Bacteria 5904
17 Ga0070669_100001575 3300005353 Bacteria 16532
18 Ga0070669_100034398 3300005353 Bacteria 3668
19 Ga0070675_100085337 3300005354 Bacteria 2638
20 Ga0070674_100002028 3300005356 Bacteria 11106
21 Ga0070674_100016244 3300005356 Bacteria 4664
22 Ga0070673_100011496 3300005364 Bacteria 6043
23 Ga0070713_100146914 3300005436 Bacteria 2094
24 Ga0070700_100068668 3300005441 Bacteria 2254
25 Ga0070681_10251951 3300005458 Bacteria 1678
26 Ga0070699_100092809 3300005518 Bacteria 2641
27 Ga0070684_100000296 3300005535 Bacteria 34560
28 Ga0070684_100021845 3300005535 Bacteria 5331
29 Ga0070672_100035337 3300005543 Bacteria 3799
30 Ga0070672_100198776 3300005543 Bacteria 1676
31 Ga0070672_100279065 3300005543 Bacteria 1412
32 Ga0070695_100042650 3300005545 Bacteria 2881
33 Ga0070693_100083130 3300005547 Bacteria 1913
34 Ga0070665_100178435 3300005548 Bacteria 2125
35 Ga0070704_100053212 3300005549 Bacteria 2860
36 Ga0070664_100002951 3300005564 Bacteria 13754
37 Ga0070664_100252894 3300005564 Bacteria 1584
38 Ga0068857_100004591 3300005577 Bacteria 11694
39 Ga0068854_100055726 3300005578 Bacteria 2847
40 Ga0068856_100076424 3300005614 Bacteria 3318
41 Ga0070702_100081578 3300005615 Bacteria 1938
42 Ga0068852_100333934 3300005616 Bacteria 1475
43 Ga0068859_100184180 3300005617 Bacteria 2171
44 Ga0068859_100337198 3300005617 Bacteria 1602
45 Ga0068864_100060995 3300005618 Bacteria 3266
46 Ga0068861_100254999 3300005719 Bacteria 1499
47 Ga0068863_100332488 3300005841 Bacteria 1477
48 Ga0068860_100134897 3300005843 Bacteria 2370
49 Ga0075367_10004900 3300006178 Bacteria 6593
50 Ga0075367_10029198 3300006178 Bacteria 3152
51 Ga0075370_10040829 3300006353 Bacteria 2618
52 Ga0075428_100002264 3300006844 Bacteria 20843
53 Ga0075428_100006623 3300006844 Bacteria 12884
54 Ga0075428_100034119 3300006844 Bacteria 5614
55 Ga0075428_100042042 3300006844 Bacteria 5027
56 Ga0075428_100072908 3300006844 Bacteria 3750
57 Ga0075430_100006932 3300006846 Bacteria 9550
58 Ga0075430_100072313 3300006846 Bacteria 2892
59 Ga0075430_100076903 3300006846 Bacteria 2797
60 Ga0075430_100215150 3300006846 Bacteria 1594
61 Ga0075431_100002079 3300006847 Bacteria 19113
62 Ga0075431_100004561 3300006847 Bacteria 13608
63 Ga0075431_100020338 3300006847 Bacteria 6781
64 Ga0075431_100025722 3300006847 Bacteria 6032
65 Ga0075433_10017993 3300006852 Bacteria 5864
66 Ga0075433_10032021 3300006852 Bacteria 4500
67 Ga0075433_10044319 3300006852 Bacteria 3864
68 Ga0075434_100288576 3300006871 Bacteria 1661
69 Ga0075434_100326139 3300006871 Bacteria 1556
70 Ga0075429_100009166 3300006880 Bacteria 8593
71 Ga0075429_100165061 3300006880 Bacteria 1940
72 Ga0097620_100050107 3300006931 Bacteria 4195
73 Ga0097620_100184183 3300006931 Bacteria 2171
74 Ga0097620_100337221 3300006931 Bacteria 1602
75 Ga0075435_100000860 3300007076 Bacteria 19005
76 Ga0105240_10049033 3300009093 Bacteria 5334
77 Ga0105240_10054422 3300009093 Bacteria 5015
78 Ga0111539_10000341 3300009094 Bacteria 57424
79 Ga0111539_10000364 3300009094 Bacteria 55762
80 Ga0111539_10004093 3300009094 Bacteria 19136
81 Ga0111539_10036833 3300009094 Bacteria 5911
82 Ga0111539_10085074 3300009094 Bacteria 3718
83 Ga0111539_10316989 3300009094 Bacteria 1815
84 Ga0114129_10004836 3300009147 Bacteria 19019
85 Ga0114129_10007529 3300009147 Bacteria 15511
86 Ga0114129_10008087 3300009147 Bacteria 14984
87 Ga0114129_10013593 3300009147 Bacteria 11600
88 Ga0114129_10015466 3300009147 Bacteria 10852
89 Ga0114129_10039384 3300009147 Bacteria 6663
90 Ga0114129_10103585 3300009147 Bacteria 3934
91 Ga0114129_10144789 3300009147 Bacteria 3255
92 Ga0114129_10152157 3300009147 Bacteria 3165
93 Ga0114129_10542349 3300009147 Bacteria 1514
94 Ga0105242_10045081 3300009176 Bacteria 3573
95 Ga0105248_10020327 3300009177 Bacteria 7356
96 Ga0105248_10062977 3300009177 Bacteria 4163
97 Ga0105248_10081134 3300009177 Bacteria 3646
98 Ga0105249_10000725 3300009553 Bacteria 30019
99 Ga0105249_10259994 3300009553 Bacteria 1724
100 Ga0105239_10077058 3300010375 Bacteria 3668
101 Ga0105246_10101083 3300011119 Bacteria 2099
102 Ga0157370_10354364 3300013104 Bacteria 1352
103 Ga0157374_10022382 3300013296 Bacteria 5638
104 Ga0163162_10015980 3300013306 Bacteria 7336
105 Ga0157375_10205305 3300013308 Bacteria 2127
106 Ga0157380_10003709 3300014326 Bacteria 10500
107 Ga0157380_10004600 3300014326 Bacteria 9582
108 Ga0157380_10096417 3300014326 Bacteria 2452
109 Ga0207697_10032189 3300025315 Bacteria 2146
110 Ga0207688_10081884 3300025901 Bacteria 1844
111 Ga0207680_10065198 3300025903 Bacteria 2235
112 Ga0207695_10177620 3300025913 Bacteria 2051
113 Ga0207663_10063723 3300025916 Bacteria 2349
114 Ga0207660_10288423 3300025917 Bacteria 1304
115 Ga0207662_10019659 3300025918 Bacteria 3847
116 Ga0207649_10011793 3300025920 Bacteria 4833
117 Ga0207650_10002937 3300025925 Bacteria 11756
118 Ga0207650_10006861 3300025925 Bacteria 7765
119 Ga0207650_10010239 3300025925 Bacteria 6427
120 Ga0207700_10011780 3300025928 Bacteria 5597
121 Ga0207644_10054914 3300025931 Bacteria 2869
122 Ga0207706_10010904 3300025933 Bacteria 8294
123 Ga0207709_10226227 3300025935 Bacteria 1352
124 Ga0207670_10116810 3300025936 Bacteria 1932
125 Ga0207669_10003893 3300025937 Bacteria 6512
126 Ga0207691_10011560 3300025940 Bacteria 8476
127 Ga0207711_10006333 3300025941 Bacteria 9981
128 Ga0207711_10028752 3300025941 Bacteria 4682
129 Ga0207711_10070555 3300025941 Bacteria 3030
130 Ga0207689_10003976 3300025942 Bacteria 13446
131 Ga0207651_10004848 3300025960 Bacteria 6853
132 Ga0207712_10213174 3300025961 Bacteria 1539
133 Ga0207668_10043528 3300025972 Bacteria 3048
134 Ga0207677_10188459 3300026023 Bacteria 1629
135 Ga0207678_10094183 3300026067 Bacteria 2559
136 Ga0207708_10071674 3300026075 Bacteria 2655
137 Ga0207641_10237111 3300026088 Bacteria 1698
138 Ga0207676_10059163 3300026095 Bacteria 3025
139 Ga0207674_10024517 3300026116 Bacteria 6444
140 Ga0207674_10029040 3300026116 Bacteria 5829
141 Ga0207675_100017425 3300026118 Bacteria 6705
142 Ga0207675_100308533 3300026118 Bacteria 1543
143 Ga0207683_10097526 3300026121 Bacteria 2622
144 Ga0207683_10109724 3300026121 Bacteria 2470
145 Ga0207428_10000816 3300027907 Bacteria 35146
146 Ga0207428_10001099 3300027907 Bacteria 29427
147 Ga0207428_10055244 3300027907 Bacteria 3158
148 Ga0207428_10276023 3300027907 Bacteria 1249
149 Ga0307408_100052418 3300031548 Bacteria 2942
150 Ga0307408_100113763 3300031548 Bacteria 2083
151 Ga0307408_100128618 3300031548 Bacteria 1973
152 Ga0307405_10047888 3300031731 Bacteria 2634
153 Ga0307413_10026497 3300031824 Bacteria 3196
154 Ga0307413_10027086 3300031824 Bacteria 3170
155 Ga0307413_10029288 3300031824 Bacteria 3078
156 Ga0307406_10106222 3300031901 Bacteria 1923
157 Ga0307412_10007131 3300031911 Bacteria 6344
158 Ga0307409_100038034 3300031995 Bacteria 3555
159 Ga0307416_100033940 3300032002 Bacteria 3876
160 Ga0307416_100053454 3300032002 Bacteria 3240
161 Ga0307416_100060228 3300032002 Bacteria 3090
162 Ga0307416_100099251 3300032002 Bacteria 2528
163 Ga0307416_100155723 3300032002 Bacteria 2103
164 Ga0307416_100205226 3300032002 Bacteria 1874
165 Ga0307414_10078559 3300032004 Bacteria 2406
166 Ga0307411_10100633 3300032005 Bacteria 2043
167 Ga0307415_100036414 3300032126 Bacteria 3224
168 Ga0307415_100157532 3300032126 Bacteria 1756
169 Ga0373955_0127285 3300035172 Bacteria 1485
170 Ga0373931_0058173 3300035691 Bacteria 2076
171 Ga0373937_0006773 3300036401 Bacteria 9892
172 Ga0373925_0002450 3300037068 Bacteria 14859
173 Ga0395900_0118332 3300037418 Bacteria 2719
174 Ga0450920_014843 3300042122 Unclassified 1478
175 Ga0450894_002765 3300042131 Bacteria 2327
176 Ga0450896_000273 3300042133 Bacteria 4768
177 Ga0439435_0005997 3300042436 Unclassified 2709
178 Ga0439435_0007724 3300042436 Bacteria 2472
179 Ga0439435_0011258 3300042436 Bacteria 2144
180 Ga0439435_0029730 3300042436 Bacteria 1477
181 Ga0439464_0002475 3300042439 Bacteria 4549
182 Ga0450918_008075 3300042531 Bacteria 1852
183 Ga0451577_0197584 3300042876 Bacteria 1815
184 Ga0453684_0247034 3300044712 Bacteria 2051
185 Ga0451576_0005595 3300045051 Bacteria 15701
186 Ga0451576_0206446 3300045051 Bacteria 2051
187 Ga0495592_0050338 3300046454 Bacteria 3095
188 Ga0495664_0193498 3300046477 Bacteria 1233
189 Ga0495645_0194040 3300046543 Bacteria 1382
190 Ga0495599_0034326 3300046678 Bacteria 3187
191 Ga0495674_0091444 3300047319 Bacteria 2599
192 Ga0496104_0005396 3300048907 Bacteria 11185
193 Ga0496104_0015061 3300048907 Bacteria 6999
194 Ga0496104_0112432 3300048907 Bacteria 2612
195 Ga0496105_0068783 3300048908 Bacteria 2926
196 Ga0496105_0108166 3300048908 Bacteria 2295
197 Ga0496106_0185916 3300048909 Bacteria 1651
198 Ga0496108_0001066 3300048911 Bacteria 21388
199 Ga0496108_0158222 3300048911 Bacteria 1957
200 Ga0496109_0000525 3300048912 Bacteria 32426
201 Ga0496109_0192921 3300048912 Bacteria 1914
202 Ga0496109_0281072 3300048912 Bacteria 1568
203 Ga0496110_0001750 3300048913 Bacteria 16012
204 Ga0496110_0006981 3300048913 Bacteria 8986
205 Ga0496110_0135002 3300048913 Bacteria 2229
206 Ga0496111_0000267 3300048914 Bacteria 25489
207 Ga0496112_0000413 3300048915 Bacteria 28135
208 Ga0496112_0006486 3300048915 Bacteria 10284
209 Ga0496112_0193292 3300048915 Bacteria 1996
210 Ga0496112_0216056 3300048915 Bacteria 1874
211 Ga0496112_0372462 3300048915 Bacteria 1370
212 Ga0496113_0118004 3300048916 Bacteria 2072
213 Ga0496114_0015708 3300048917 Bacteria 6091
214 Ga0496115_0056141 3300048918 Bacteria 3165
215 Ga0501034_0263326 3300049571 Bacteria 1666
216 Ga0501036_0044831 3300049572 Bacteria 3747
217 Ga0501036_0125018 3300049572 Bacteria 2172
218 Ga0501038_0028676 3300049574 Bacteria 4944
219 Ga0501040_0017329 3300049576 Bacteria 4779
220 Ga0501040_0043178 3300049576 Bacteria 3072
221 Ga0501040_0067835 3300049576 Bacteria 2459
222 Ga0501041_0053600 3300049577 Bacteria 2460
223 Ga0501042_0117653 3300049578 Bacteria 1913
224 Ga0501046_0016645 3300049580 Bacteria 6153
225 Ga0501046_0066948 3300049580 Bacteria 2798
226 Ga0501046_0141169 3300049580 Bacteria 1823
227 Ga0501048_0032184 3300049582 Bacteria 3791
228 Ga0501067_0044171 3300049583 Bacteria 2476
229 Ga0501069_0008625 3300049585 Bacteria 5366
230 Ga0501069_0154698 3300049585 Bacteria 1319
231 Ga0501071_0025991 3300049587 Bacteria 4105
232 Ga0501071_0029206 3300049587 Bacteria 3890
233 Ga0501072_0033066 3300049588 Bacteria 4051
234 Ga0501072_0212099 3300049588 Bacteria 1543
235 Ga0501073_0012795 3300049589 Bacteria 6120
236 Ga0501074_0053651 3300049590 Bacteria 2908
237 Ga0501075_0028759 3300049591 Bacteria 4105
238 Ga0501075_0067548 3300049591 Bacteria 2699
239 Ga0501075_0100351 3300049591 Bacteria 2198
240 Ga0501075_0107164 3300049591 Bacteria 2124
241 Ga0501076_0008007 3300049592 Bacteria 7718
242 Ga0501076_0052342 3300049592 Bacteria 3234
243 Ga0501076_0113242 3300049592 Bacteria 2194
244 Ga0501076_0390982 3300049592 Bacteria 1143
245 Ga0501208_008653 3300049655 Bacteria 1381
246 Ga0501079_0023866 3300049741 Bacteria 4692
247 Ga0501079_0033535 3300049741 Bacteria 3950
248 Ga0501080_0066985 3300049742 Bacteria 3340
249 Ga0501081_0023288 3300049743 Bacteria 4150
250 Ga0501081_0041850 3300049743 Bacteria 3139
251 Ga0501081_0051737 3300049743 Bacteria 2833
252 Ga0501081_0064292 3300049743 Bacteria 2548
253 Ga0501081_0090054 3300049743 Bacteria 2156
254 Ga0501081_0189240 3300049743 Bacteria 1490
255 Ga0501045_0057649 3300049824 Bacteria 2842
256 Ga0501045_0106750 3300049824 Bacteria 2075
257 Ga0501045_0342375 3300049824 Bacteria 1113
258 nmdc:mga03n38_77527_c1 3300050490 Bacteria 1553
259 nmdc:mga00v17_68570_c1 3300050491 Bacteria 2193
260 nmdc:mga0yw44_33542_c1 3300050492 Bacteria 3000
261 nmdc:mga0yw44_99547_c1 3300050492 Bacteria 1850
262 nmdc:mga06z11_3634_c1 3300050494 Bacteria 5983
263 nmdc:mga07m45_11323_c1 3300050496 Bacteria 4684
264 nmdc:mga05p37_110399_c1 3300050507 Bacteria 3383
265 nmdc:mga05p37_2484_c1 3300050507 Bacteria 15882
266 nmdc:mga05p37_30674_c1 3300050507 Bacteria 6560
267 nmdc:mga05p37_3104_c1 3300050507 Bacteria 19302
268 nmdc:mga05p37_364022_c1 3300050507 Bacteria 1699
269 nmdc:mga09592_17103_c1 3300050508 Bacteria 5937
270 nmdc:mga09592_417017_c1 3300050508 Bacteria 1160
271 nmdc:mga0qj67_189691_c1 3300050509 Bacteria 1670
272 nmdc:mga0qj67_65266_c1 3300050509 Bacteria 2898
273 nmdc:mga06r32_1125_c1 3300050510 Bacteria 23961
274 nmdc:mga06r32_2439_c1 3300050510 Bacteria 16633
275 nmdc:mga06r32_31226_c1 3300050510 Bacteria 5002
276 nmdc:mga08y16_1686_c1 3300050511 Bacteria 22422
277 nmdc:mga08y16_19525_c1 3300050511 Bacteria 7146
278 nmdc:mga08y16_2429_c1 3300050511 Bacteria 19134
279 nmdc:mga08y16_253028_c1 3300050511 Bacteria 1820
280 nmdc:mga08y16_56027_c1 3300050511 Bacteria 4120
281 nmdc:mga0rr50_17346_c1 3300050513 Bacteria 4805
282 nmdc:mga0rr50_47839_c1 3300050513 Bacteria 3158
283 nmdc:mga0a205_122373_c1 3300050515 Bacteria 2502
284 nmdc:mga0a205_15213_c1 3300050515 Bacteria 7188
285 nmdc:mga0a205_48196_c1 3300050515 Bacteria 4112
286 nmdc:mga0a205_70627_c1 3300050515 Bacteria 3371
287 Ga0500645_001440 3300053730 Bacteria 12060
288 Ga0501084_0015076 3300054114 Bacteria 6410
289 Ga0501084_0159530 3300054114 Bacteria 1903
290 Ga0590071_001692 3300059421 Bacteria 5720
291 Ga0590075_000125 3300059424 Bacteria 19823
292 Ga0590075_009847 3300059424 Bacteria 2294
293 Ga0590077_000080 3300059426 Bacteria 24623
294 Ga0501082_0109420 3300060353 Bacteria 2392
295 Ga0530510_0001595 3300061734 Bacteria 15301
296 Ga0530510_0166418 3300061734 Bacteria 1632
297 Ga0075364_10080643
298 Ga0065712_10082382
299 Ga0065712_10086966
300 Ga0065715_10120289
301 Ga0065715_10208127
302 Ga0065707_10083231
303 Ga0065707_10136066
304 Ga0070676_10095595
305 Ga0070683_100000219
306 Ga0070683_100126288
307 Ga0070670_100007985
308 Ga0070670_100090660
309 Ga0070677_10038647
310 Ga0070666_10101720
311 Ga0070689_100056543
312 Ga0070661_100012651
313 Ga0070669_100001575
314 Ga0070669_100034398
315 Ga0070675_100085337
316 Ga0070674_100002028
317 Ga0070674_100016244
318 Ga0070673_100011496
319 Ga0070713_100146914
320 Ga0070700_100068668
321 Ga0070681_10251951
322 Ga0070699_100092809
323 Ga0070684_100000296
324 Ga0070684_100021845
325 Ga0070672_100035337
326 Ga0070672_100198776
327 Ga0070672_100279065
328 Ga0070695_100042650
329 Ga0070693_100083130
330 Ga0070665_100178435
331 Ga0070704_100053212
332 Ga0070664_100002951
333 Ga0070664_100252894
334 Ga0068857_100004591
335 Ga0068854_100055726
336 Ga0068856_100076424
337 Ga0070702_100081578
338 Ga0068852_100333934
339 Ga0068859_100184180
340 Ga0068859_100337198
341 Ga0068864_100060995
342 Ga0068861_100254999
343 Ga0068863_100332488
344 Ga0068860_100134897
345 Ga0075367_10004900
346 Ga0075367_10029198
347 Ga0075370_10040829
348 Ga0075428_100002264
349 Ga0075428_100006623
350 Ga0075428_100034119
351 Ga0075428_100042042
352 Ga0075428_100072908
353 Ga0075430_100006932
354 Ga0075430_100072313
355 Ga0075430_100076903
356 Ga0075430_100215150
357 Ga0075431_100002079
358 Ga0075431_100004561
359 Ga0075431_100020338
360 Ga0075431_100025722
361 Ga0075433_10017993
362 Ga0075433_10032021
363 Ga0075433_10044319
364 Ga0075434_100288576
365 Ga0075434_100326139
366 Ga0075429_100009166
367 Ga0075429_100165061
368 Ga0097620_100050107
369 Ga0097620_100184183
370 Ga0097620_100337221
371 Ga0075435_100000860
372 Ga0105240_10049033
373 Ga0105240_10054422
374 Ga0111539_10000341
375 Ga0111539_10000364
376 Ga0111539_10004093
377 Ga0111539_10036833
378 Ga0111539_10085074
379 Ga0111539_10316989
380 Ga0114129_10004836
381 Ga0114129_10007529
382 Ga0114129_10008087
383 Ga0114129_10013593
384 Ga0114129_10015466
385 Ga0114129_10039384
386 Ga0114129_10103585
387 Ga0114129_10144789
388 Ga0114129_10152157
389 Ga0114129_10542349
390 Ga0105242_10045081
391 Ga0105248_10020327
392 Ga0105248_10062977
393 Ga0105248_10081134
394 Ga0105249_10000725
395 Ga0105249_10259994
396 Ga0105239_10077058
397 Ga0105246_10101083
398 Ga0157370_10354364
399 Ga0157374_10022382
400 Ga0163162_10015980
401 Ga0157375_10205305
402 Ga0157380_10003709
403 Ga0157380_10004600
404 Ga0157380_10096417
405 Ga0207697_10032189
406 Ga0207688_10081884
407 Ga0207680_10065198
408 Ga0207695_10177620
409 Ga0207663_10063723
410 Ga0207660_10288423
411 Ga0207662_10019659
412 Ga0207649_10011793
413 Ga0207650_10002937
414 Ga0207650_10006861
415 Ga0207650_10010239
416 Ga0207700_10011780
417 Ga0207644_10054914
418 Ga0207706_10010904
419 Ga0207709_10226227
420 Ga0207670_10116810
421 Ga0207669_10003893
422 Ga0207691_10011560
423 Ga0207711_10006333
424 Ga0207711_10028752
425 Ga0207711_10070555
426 Ga0207689_10003976
427 Ga0207651_10004848
428 Ga0207712_10213174
429 Ga0207668_10043528
430 Ga0207677_10188459
431 Ga0207678_10094183
432 Ga0207708_10071674
433 Ga0207641_10237111
434 Ga0207676_10059163
435 Ga0207674_10024517
436 Ga0207674_10029040
437 Ga0207675_100017425
438 Ga0207675_100308533
439 Ga0207683_10097526
440 Ga0207683_10109724
441 Ga0207428_10000816
442 Ga0207428_10001099
443 Ga0207428_10055244
444 Ga0207428_10276023
445 Ga0307408_100052418
446 Ga0307408_100113763
447 Ga0307408_100128618
448 Ga0307405_10047888
449 Ga0307413_10026497
450 Ga0307413_10027086
451 Ga0307413_10029288
452 Ga0307406_10106222
453 Ga0307412_10007131
454 Ga0307409_100038034
455 Ga0307416_100033940
456 Ga0307416_100053454
457 Ga0307416_100060228
458 Ga0307416_100099251
459 Ga0307416_100155723
460 Ga0307416_100205226
461 Ga0307414_10078559
462 Ga0307411_10100633
463 Ga0307415_100036414
464 Ga0307415_100157532
465 Ga0373955_0127285
466 Ga0373931_0058173
467 Ga0373937_0006773
468 Ga0373925_0002450
469 Ga0395900_0118332
470 Ga0450920_014843
471 Ga0450894_002765
472 Ga0450896_000273
473 Ga0439435_0005997
474 Ga0439435_0007724
475 Ga0439435_0011258
476 Ga0439435_0029730
477 Ga0439464_0002475
478 Ga0450918_008075
479 Ga0451577_0197584
480 Ga0453684_0247034
481 Ga0451576_0005595
482 Ga0451576_0206446
483 Ga0495592_0050338
484 Ga0495664_0193498
485 Ga0495645_0194040
486 Ga0495599_0034326
487 Ga0495674_0091444
488 Ga0496104_0005396
489 Ga0496104_0015061
490 Ga0496104_0112432
491 Ga0496105_0068783
492 Ga0496105_0108166
493 Ga0496106_0185916
494 Ga0496108_0001066
495 Ga0496108_0158222
496 Ga0496109_0000525
497 Ga0496109_0192921
498 Ga0496109_0281072
499 Ga0496110_0001750
500 Ga0496110_0006981
501 Ga0496110_0135002
502 Ga0496111_0000267
503 Ga0496112_0000413
504 Ga0496112_0006486
505 Ga0496112_0193292
506 Ga0496112_0216056
507 Ga0496112_0372462
508 Ga0496113_0118004
509 Ga0496114_0015708
510 Ga0496115_0056141
511 Ga0501034_0263326
512 Ga0501036_0044831
513 Ga0501036_0125018
514 Ga0501038_0028676
515 Ga0501040_0017329
516 Ga0501040_0043178
517 Ga0501040_0067835
518 Ga0501041_0053600
519 Ga0501042_0117653
520 Ga0501046_0016645
521 Ga0501046_0066948
522 Ga0501046_0141169
523 Ga0501048_0032184
524 Ga0501067_0044171
525 Ga0501069_0008625
526 Ga0501069_0154698
527 Ga0501071_0025991
528 Ga0501071_0029206
529 Ga0501072_0033066
530 Ga0501072_0212099
531 Ga0501073_0012795
532 Ga0501074_0053651
533 Ga0501075_0028759
534 Ga0501075_0067548
535 Ga0501075_0100351
536 Ga0501075_0107164
537 Ga0501076_0008007
538 Ga0501076_0052342
539 Ga0501076_0113242
540 Ga0501076_0390982
541 Ga0501208_008653
542 Ga0501079_0023866
543 Ga0501079_0033535
544 Ga0501080_0066985
545 Ga0501081_0023288
546 Ga0501081_0041850
547 Ga0501081_0051737
548 Ga0501081_0064292
549 Ga0501081_0090054
550 Ga0501081_0189240
551 Ga0501045_0057649
552 Ga0501045_0106750
553 Ga0501045_0342375
554 nmdc:mga03n38_77527_c1
555 nmdc:mga00v17_68570_c1
556 nmdc:mga0yw44_33542_c1
557 nmdc:mga0yw44_99547_c1
558 nmdc:mga06z11_3634_c1
559 nmdc:mga07m45_11323_c1
560 nmdc:mga05p37_110399_c1
561 nmdc:mga05p37_2484_c1
562 nmdc:mga05p37_30674_c1
563 nmdc:mga05p37_3104_c1
564 nmdc:mga05p37_364022_c1
565 nmdc:mga09592_17103_c1
566 nmdc:mga09592_417017_c1
567 nmdc:mga0qj67_189691_c1
568 nmdc:mga0qj67_65266_c1
569 nmdc:mga06r32_1125_c1
570 nmdc:mga06r32_2439_c1
571 nmdc:mga06r32_31226_c1
572 nmdc:mga08y16_1686_c1
573 nmdc:mga08y16_19525_c1
574 nmdc:mga08y16_2429_c1
575 nmdc:mga08y16_253028_c1
576 nmdc:mga08y16_56027_c1
577 nmdc:mga0rr50_17346_c1
578 nmdc:mga0rr50_47839_c1
579 nmdc:mga0a205_122373_c1
580 nmdc:mga0a205_15213_c1
581 nmdc:mga0a205_48196_c1
582 nmdc:mga0a205_70627_c1
583 Ga0500645_001440
584 Ga0501084_0015076
585 Ga0501084_0159530
586 Ga0590071_001692
587 Ga0590075_000125
588 Ga0590075_009847
589 Ga0590077_000080
590 Ga0501082_0109420
591 Ga0530510_0001595
592 Ga0530510_0166418

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF21016

RlmN_N

Ribosomal RNA large subunit methyltransferase N-terminal domain

5

64

0.94

PF04055

Radical_SAM

Radical SAM superfamily

107

268

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
6fz6-assembly2.cif.gz_B crystal structure of a radical sam methyltransferase from sphaerobacter thermophilus 0.9341 8 341
3rf9-assembly1.cif.gz_B x-ray structure of rlmn from escherichia coli 0.9301 7 334
4pl1-assembly2.cif.gz_A x-ray crystal structure of c118a rlmn from escherichia coli with s-adenosylmethionine 0.9284 7 332
4pl2-assembly2.cif.gz_A x-ray crystal structure of c118a rlmn from escherichia coli 0.9272 7 335
3rfa-assembly1.cif.gz_B x-ray structure of rlmn from escherichia coli in complex with s-adenosylmethionine 0.9262 7 339
ID Description Score Start End Superfamily
3rfaB01 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1; 0.9911 7 67 1.10.150.530
3rfaA01 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1; 0.9882 7 67 1.10.150.530
3rf9A01 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1; 0.988 7 67 1.10.150.530
4pl1B01 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1; 0.9878 7 67 1.10.150.530
af_Q54J76_48_109_1.10.150.530 Mainly Alpha;Orthogonal Bundle;DNA polymerase; domain 1; 0.9632 7 67 1.10.150.530
ID Description Score Start End GO Terms
AF-A0A3D4FTC5-F1-model_v4 23S rRNA (Adenine(2503)-C(2))-methyltransferase RlmN 0.9702 6 243 GO:0008168
GO:0030488
GO:0046872
GO:0051539
GO:0070475
AF-A0A2V8BQF0-F1-model_v4 23S rRNA (Adenine(2503)-C(2))-methyltransferase RlmN 0.9683 1 326 GO:0005737
GO:0008173
GO:0030488
GO:0046872
GO:0051539
GO:0070475
AF-A0A3N5MXD7-F1-model_v4 23S rRNA (Adenine(2503)-C(2))-methyltransferase RlmN 0.9663 9 142 GO:0008168
GO:0030488
GO:0046872
GO:0051539
GO:0070475
AF-A0A7C1DAB6-F1-model_v4 23S rRNA (Adenine(2503)-C(2))-methyltransferase RlmN 0.9658 5 110 GO:0030488
GO:0051539
GO:0070475
AF-A0A2V8BQF0-F1-model_v4 23S rRNA (Adenine(2503)-C(2))-methyltransferase RlmN 0.9654 1 326 GO:0005737
GO:0008173
GO:0030488
GO:0046872
GO:0051539
GO:0070475

Map