F392926

General Info

Members Datasets Scaffolds Average Seq Length
295 240 590 299

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2862507626|2862512955
Length 351
Sequence KAGKPVRVVGFDGTPDGRKAVGEGTLYASTAQQPAGRPPGTTLWGAMEHQSVYDYDLLIVGSANADLVIGVERRPGAGETVLGSDLAVHPGGKGANQAVAAARLGARTALLARVGDDAHGRLLLDSQREAGVDTANVLVGGAPTGVALITVDPSGDNSIVVSPGANGRLTPADVRAAGSIFHAARVVSTQLEIPLETVAEVARTLAPGSRLVLNPSPPQPLPSEVLAACDPLILNEHEAKVILGEARVGEEPEDWARLLLAKGPRSVVVTLGGEGSLVASSDGVARVPSVPVRAVDTTGAGDSFTAALAWRLGLGDSLADAASYAARVGAVTVTKEGAQVSFPTAEEVAAL

Samples

Sample ID Description Type Environment
1 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
4 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
11 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
12 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
13 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
14 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
15 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
16 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
17 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
18 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
19 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
20 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
21 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
22 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
23 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
24 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
25 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
26 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
27 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
28 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
29 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
30 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
31 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
32 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
33 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
38 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
39 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
40 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
41 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
42 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
43 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
44 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
45 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
46 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
47 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
48 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
49 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
50 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
51 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
52 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
53 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
54 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
55 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
56 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
57 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
58 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
59 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
60 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
61 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
62 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
63 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
64 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
65 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
66 3300042011 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z062817_5204 Metagenome Rhizosphere
67 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
68 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
69 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
70 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
71 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
72 3300042138 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0624L_E14_072516_1379 Metagenome Rhizosphere
73 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
74 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
75 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
76 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
77 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
78 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
79 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
80 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
81 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
82 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
83 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
84 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
85 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
86 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
87 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
88 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
89 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
90 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
91 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
92 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
93 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
94 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
95 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
96 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
97 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
98 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
99 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
100 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
101 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
102 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
103 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
104 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
105 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
106 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
107 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
108 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
109 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
110 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
111 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
112 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
113 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
114 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
115 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
116 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
117 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
118 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
119 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
120 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
121 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
122 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
123 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
124 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
125 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
126 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
127 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
128 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
129 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
130 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
131 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
132 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
133 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
134 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
135 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
136 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
137 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
138 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
139 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
140 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
150 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
152 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
153 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
154 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
155 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
157 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
158 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
159 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
160 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
161 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
162 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
163 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
164 3300053149 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 endosphere Metagenome Endosphere
165 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
166 2862507626 Streptomyces sp. NWU339 Isolate Unclassified
167 2547132111 Streptomyces sp. TOR3209 Isolate Rhizosphere
168 2582581313 Streptomyces mirabilis OV308 Isolate Rhizosphere
169 2616644941 Streptomyces atratus OK807 Isolate Rhizosphere
170 2643221548 Streptomyces sp. Root55 Isolate Unclassified
171 2643221578 Streptomyces sp. Root63 Isolate Unclassified
172 2643221647 Streptomyces sp. Root369 Isolate Unclassified
173 2643221673 Streptomyces sp. Root1295 Isolate Unclassified
174 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
175 2643221682 Streptomyces sp. Root1319 Isolate Unclassified
176 2643221699 Brevundimonas sp. Root1423 Isolate Unclassified
177 2643221714 Streptomyces sp. Root264 Isolate Unclassified
178 2784132148 Streptomyces sp. E5N91 SAI-083 Isolate Unclassified
179 2784746768 Streptomyces griseorubiginosus SAI-142 Isolate Unclassified
180 2786546132 Streptomyces sp. W SAI-097 Isolate Unclassified
181 2791355406 Streptomyces rhizosphaericus NRRL B-24304 Isolate Unclassified
182 2802429296 Streptomyces sampsonii KJ40 Isolate Rhizosphere
183 2808606359 Streptomyces sp. RJA2910 Isolate Unclassified
184 2808606375 Streptomyces sp. SLBN-31 Isolate Unclassified
185 2808606448 Streptomyces sp. 193411 Isolate Unclassified
186 2811994879 Streptomyces sp. 4-17 Isolate Unclassified
187 2811994917 Streptomyces sp. SLBN-134 Isolate Unclassified
188 2818991463 Streptomyces argenteolus 3259 Isolate Rhizosphere
189 2837183177 Egibacter rhizosphaerae EGI 80759 Isolate Unclassified
190 2852635781 Streptomyces sp. AK010 Isolate Rhizosphere
191 2862178590 Streptomyces sp. SDr-06 Isolate Rhizosphere
192 2862281513 Streptomyces sp. Act143 Isolate Rhizosphere
193 2862290372 Streptomyces triticagri NEAU-YY421 Isolate Rhizosphere
194 2862382967 Streptomyces scabiei NRRL B-2795 Isolate Nodule
195 2862574272 Streptomyces sp. AcE210 Isolate Nodule
196 2863404153 Streptomyces scabiei SAI-025 (Annotation) (version 2) Isolate Unclassified
197 2867475112 Streptomyces sp. TM32 Isolate Unclassified
198 2873151551 Streptomyces silaceus ACCC40021 Isolate Rhizosphere
199 2875391855 Streptomyces cavourensis 1AS2a Isolate Rhizosphere
200 2877676314 Streptomyces griseorubiginosus 3E-1 Isolate Unclassified
201 2912715099 Streptomyces sp. Z423-1 Isolate Rhizosphere
202 2912723979 Streptomyces sp. NEAU-sy36 Isolate Rhizosphere
203 2917554339 Chthonobacter rhizosphaerae yh7-1 Isolate Rhizosphere
204 2919051321 Sinomonas atrocyanea 1003 Isolate Rhizosphere
205 2919468124 Streptomyces sp. 3330 Isolate Rhizosphere
206 2946045630 Streptomyces sp. W4I9-2 Isolate Rhizosphere
207 2946064051 Streptomyces luteogriseus W4I19-1 Isolate Rhizosphere
208 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
209 2947224130 Streptomyces afghaniensis W1I20 Isolate Rhizosphere
210 2954380949 Streptomyces ciscaucasicus W1I15 Isolate Rhizosphere
211 2954673503 Streptomyces sp. SAI-119 Isolate Rhizosphere
212 2954682443 Streptomyces sp. SAI-149 Isolate Rhizosphere
213 2954701450 Streptomyces sp. SAI-144 Isolate Rhizosphere
214 2954711539 Streptomyces sp. SAI-090 Isolate Rhizosphere
215 2954721474 Streptomyces sp. SAI-117 Isolate Rhizosphere
216 2954731030 Streptomyces sp. SAI-133 Isolate Rhizosphere
217 2954740390 Streptomyces sp. SAI-041 Isolate Rhizosphere
218 2954749733 Streptomyces sp. SAI-135 Isolate Rhizosphere
219 2954759201 Streptomyces sp. SAI-208 Isolate Rhizosphere
220 2966598605 Kitasatospora papulosa SLBN-177 Isolate Rhizosphere
221 2990059506 Streptomyces sp. CAP261 Isolate Unclassified
222 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
223 2997600082 Streptomyces coffeae CA1R205 Isolate Unclassified
224 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
225 3006425503 Streptomyces zingiberis PLAI1-29 Isolate Unclassified
226 3006493962 Streptomyces grisecoloratus TRM S81-3 Isolate Rhizosphere
227 8008558824 Streptomyces scabiei NRRL B-2795 Isolate Nodule
228 8008574985 Streptomyces sp. Jing01 Isolate Rhizosphere
229 8023623736 Streptomyces sp. 111WW2 Isolate Unclassified
230 8025413630 Streptomyces sp. CAI-17 Isolate Rhizosphere
231 8047893842 Streptomyces cangkringensis DSM 41769 Isolate Rhizosphere
232 8048127548 Streptomyces samsunensis DSM 42010 Isolate Rhizosphere
233 8048356638 Streptomyces rhizosphaericus DSM 41760 Isolate Rhizosphere
234 8048369669 Streptomyces indonesiensis DSM 41759 Isolate Rhizoplane
235 8048379754 Streptomyces asiaticus DSM 41761 Isolate Rhizosphere
236 8054160619 Streptomyces rhizoryzae RS10V-4 Isolate Rhizosphere
237 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
238 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
239 8056447290 Streptomyces huiliensis SCA2-4 Isolate Rhizosphere
240 8056667051 Streptomyces sichuanensis SCA3-4 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 73.9
Metatranscriptomes 0.34
Isolates 25.76

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.08
Nodule 1.02
Rhizoplane 0.34
Rhizosphere 76.61
Stem 0
Stem Tuber 0
Unclassified 1.02

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 rootH1_10032377 3300003316 Bacteria 3311
2 rootH1_10015361 3300003323 Bacteria 6062
3 JGI25160J50197_1008902 3300003354 Bacteria 3773
4 JGI25160J50197_1025164 3300003354 Bacteria 1671
5 Ga0055526_1000463 3300003771 Bacteria 32265
6 Ga0070658_10005026 3300005327 Bacteria 10768
7 Ga0070683_100019809 3300005329 Bacteria 5980
8 Ga0070689_100150771 3300005340 Bacteria 1875
9 Ga0070661_100075467 3300005344 Bacteria 2484
10 Ga0070714_100020615 3300005435 Bacteria 5387
11 Ga0070714_100060603 3300005435 Bacteria 3248
12 Ga0070705_100213285 3300005440 Bacteria 1332
13 Ga0070685_10116098 3300005466 Bacteria 1656
14 Ga0070684_100106917 3300005535 Bacteria 2506
15 Ga0068864_100327312 3300005618 Bacteria 1441
16 Ga0075363_100010456 3300006048 Bacteria 4410
17 Ga0070712_100176430 3300006175 Bacteria 1662
18 Ga0075436_100089333 3300006914 Bacteria 2141
19 Ga0111539_10526434 3300009094 Bacteria 1377
20 Ga0114129_10000977 3300009147 Bacteria 37424
21 Ga0157369_10020767 3300013105 Bacteria 7340
22 Ga0182008_10005624 3300014497 Bacteria 7103
23 Ga0182007_10002128 3300015262 Bacteria 10112
24 Ga0206353_10788804 3300020082 Bacteria 1356
25 Ga0213875_10086717 3300021388 Bacteria 1460
26 Ga0209564_1000043 3300025295 Bacteria 388153
27 Ga0209758_1016418 3300025297 Bacteria 3763
28 Ga0209256_1000374 3300025299 Bacteria 71875
29 Ga0207426_1001749 3300025302 Bacteria 16525
30 Ga0207426_1010839 3300025302 Bacteria 3513
31 Ga0207426_1040694 3300025302 Bacteria 1446
32 Ga0207647_10018789 3300025904 Bacteria 4663
33 Ga0207705_10270240 3300025909 Bacteria 1300
34 Ga0207707_10203675 3300025912 Bacteria 1725
35 Ga0207693_10032008 3300025915 Unclassified 4154
36 Ga0207693_10277629 3300025915 Bacteria 1313
37 Ga0207709_10068524 3300025935 Bacteria 2243
38 Ga0207665_10080143 3300025939 Bacteria 2245
39 Ga0207661_10073561 3300025944 Bacteria 2799
40 Ga0207679_10354124 3300025945 Bacteria 1280
41 Ga0207678_10095528 3300026067 Bacteria 2540
42 Ga0307517_10088716 3300028786 Bacteria 2553
43 Ga0307515_10000541 3300028794 Bacteria 88944
44 Ga0307511_10005628 3300030521 Bacteria 12715
45 Ga0307513_10265802 3300031456 Bacteria 1502
46 Ga0307509_10020123 3300031507 Bacteria 7583
47 Ga0307509_10021348 3300031507 Bacteria 7321
48 Ga0307508_10010039 3300031616 Bacteria 8676
49 Ga0307508_10020962 3300031616 Bacteria 5939
50 Ga0307508_10094344 3300031616 Bacteria 2583
51 Ga0307514_10080015 3300031649 Bacteria 2420
52 Ga0307516_10126650 3300031730 Bacteria 2338
53 Ga0307405_10018562 3300031731 Bacteria 3840
54 Ga0307413_10294849 3300031824 Bacteria 1227
55 Ga0307410_10079820 3300031852 Bacteria 2294
56 Ga0307410_10394082 3300031852 Bacteria 1117
57 Ga0307407_10181341 3300031903 Bacteria 1396
58 Ga0307409_100001500 3300031995 Bacteria 11531
59 Ga0307416_100050222 3300032002 Unclassified 3323
60 Ga0307414_10070410 3300032004 Bacteria 2518
61 Ga0307415_100001942 3300032126 Bacteria 10171
62 Ga0307415_100186410 3300032126 Bacteria 1633
63 Ga0307507_10021084 3300033179 Bacteria 7270
64 Ga0307507_10030364 3300033179 Bacteria 5702
65 Ga0307510_10054625 3300033180 Bacteria 4180
66 Ga0307510_10086040 3300033180 Bacteria 3017
67 Ga0395899_0001150 3300037312 Bacteria 23385
68 Ga0395900_0053852 3300037418 Bacteria 4142
69 Ga0395898_0013633 3300037466 Bacteria 8362
70 Ga0395905_0109225 3300037471 Bacteria 2597
71 Ga0395905_0157482 3300037471 Bacteria 2136
72 Ga0436364_0220764 3300037853 Bacteria 2185
73 Ga0395901_0028943 3300038443 Bacteria 5700
74 Ga0395901_0096940 3300038443 Bacteria 3090
75 Ga0395901_0549058 3300038443 Bacteria 1171
76 Ga0439433_0000374 3300041999 Bacteria 7964
77 Ga0439442_022691 3300042002 Bacteria 1303
78 Ga0439448_0001250 3300042005 Bacteria 6498
79 Ga0439448_0028790 3300042005 Bacteria 1756
80 Ga0439449_0008214 3300042007 Bacteria 3968
81 Ga0439449_0009303 3300042007 Bacteria 3725
82 Ga0439449_0015193 3300042007 Bacteria 2892
83 Ga0439450_000126 3300042008 Bacteria 8111
84 Ga0439454_021712 3300042011 Bacteria 951
85 Ga0439455_0029827 3300042012 Bacteria 1350
86 Ga0439457_000938 3300042014 Bacteria 8756
87 Ga0439462_0007297 3300042015 Bacteria 2763
88 Ga0439463_001441 3300042016 Bacteria 6316
89 Ga0450902_002248 3300042137 Bacteria 2728
90 Ga0450902_010567 3300042137 Bacteria 1461
91 Ga0450903_000720 3300042138 Bacteria 6569
92 Ga0439444_0000010 3300042437 Bacteria 15553
93 Ga0439464_0008321 3300042439 Bacteria 2719
94 Ga0439460_0000965 3300042461 Bacteria 6605
95 Ga0466972_0029193 3300044658 Bacteria 2715
96 Ga0466972_0032749 3300044658 Bacteria 2551
97 Ga0466972_0047546 3300044658 Bacteria 2075
98 Ga0466965_0006945 3300044683 Bacteria 5180
99 Ga0466965_0125239 3300044683 Bacteria 1329
100 Ga0466966_0004137 3300044684 Bacteria 9578
101 Ga0466966_0009137 3300044684 Bacteria 6563
102 Ga0466966_0126837 3300044684 Bacteria 1565
103 Ga0466961_0002837 3300044693 Bacteria 10763
104 Ga0466961_0005533 3300044693 Bacteria 7968
105 Ga0466964_0022499 3300044706 Bacteria 2446
106 Ga0466971_0009115 3300044719 Bacteria 4337
107 Ga0466970_0001488 3300044765 Bacteria 11266
108 Ga0466970_0003950 3300044765 Bacteria 7267
109 Ga0466957_0076957 3300044842 Bacteria 2072
110 Ga0466960_0008432 3300044901 Bacteria 4221
111 Ga0466959_0004028 3300045049 Bacteria 9764
112 Ga0451576_0007914 3300045051 Bacteria 12586
113 Ga0466958_0004295 3300045836 Bacteria 7504
114 Ga0466967_0104595 3300045976 Bacteria 2592
115 Ga0466967_0200345 3300045976 Bacteria 1890
116 Ga0495617_021479 3300046452 Bacteria 2179
117 Ga0495629_0000707 3300046459 Bacteria 27008
118 Ga0495629_0006011 3300046459 Bacteria 9028
119 Ga0495629_0106226 3300046459 Bacteria 1958
120 Ga0495638_0046410 3300046460 Bacteria 2729
121 Ga0495638_0071651 3300046460 Bacteria 2120
122 Ga0495651_0012456 3300046462 Bacteria 6558
123 Ga0495605_0092814 3300046474 Bacteria 1397
124 Ga0495662_0003473 3300046476 Bacteria 7984
125 Ga0495664_0097180 3300046477 Bacteria 1772
126 Ga0495585_0029855 3300046492 Bacteria 3102
127 Ga0495594_0000260 3300046499 Bacteria 25795
128 Ga0495594_0057735 3300046499 Bacteria 2143
129 Ga0495594_0064073 3300046499 Bacteria 2037
130 Ga0495594_0155856 3300046499 Bacteria 1297
131 Ga0495607_0038172 3300046501 Bacteria 2879
132 Ga0495607_0074666 3300046501 Bacteria 1881
133 Ga0495583_0008860 3300046506 Bacteria 6086
134 Ga0495606_0129139 3300046507 Unclassified 1504
135 Ga0495618_0015177 3300046514 Bacteria 4700
136 Ga0495628_0032171 3300046516 Bacteria 4237
137 Ga0495630_0050733 3300046517 Bacteria 3105
138 Ga0495631_0047853 3300046518 Bacteria 1876
139 Ga0495644_0007976 3300046523 Bacteria 4074
140 Ga0495642_0067683 3300046528 Bacteria 1490
141 Ga0495652_0017915 3300046529 Bacteria 6320
142 Ga0495587_0004766 3300046536 Bacteria 8907
143 Ga0495609_0101534 3300046538 Bacteria 1246
144 Ga0495645_0025262 3300046543 Bacteria 4311
145 Ga0495622_0003092 3300046557 Bacteria 7893
146 Ga0495622_0009499 3300046557 Bacteria 4499
147 Ga0495634_0001005 3300046642 Bacteria 26553
148 Ga0495611_0003229 3300046648 Bacteria 7212
149 Ga0495625_0020564 3300046660 Bacteria 5093
150 Ga0495625_0058688 3300046660 Bacteria 2733
151 Ga0495635_0024236 3300046663 Bacteria 4230
152 Ga0495588_0002109 3300046674 Bacteria 8533
153 Ga0495588_0009466 3300046674 Bacteria 4503
154 Ga0495657_0001985 3300046675 Bacteria 17443
155 Ga0495646_0029076 3300046680 Bacteria 3455
156 Ga0495658_0005733 3300046683 Bacteria 6101
157 Ga0495613_0025670 3300046689 Bacteria 4390
158 Ga0495671_0001899 3300046692 Bacteria 13419
159 Ga0495649_0000165 3300046694 Bacteria 57643
160 Ga0495649_0034524 3300046694 Bacteria 2783
161 Ga0495589_0004123 3300046794 Bacteria 7775
162 Ga0495600_0053776 3300046809 Bacteria 2629
163 Ga0495660_0003952 3300046810 Bacteria 9055
164 Ga0495604_0000237 3300047317 Bacteria 49264
165 Ga0495636_0003544 3300047318 Bacteria 6052
166 Ga0495672_0001895 3300047320 Bacteria 19902
167 Ga0495676_0004323 3300047321 Bacteria 12982
168 Ga0495676_0009988 3300047321 Bacteria 8624
169 Ga0495683_0003480 3300047323 Bacteria 9177
170 Ga0495687_000551 3300047443 Bacteria 44454
171 Ga0495687_003518 3300047443 Bacteria 11288
172 Ga0495687_015321 3300047443 Bacteria 3904
173 Ga0495685_009358 3300047447 Bacteria 3272
174 Ga0495681_0000405 3300047470 Bacteria 33516
175 Ga0495684_0143070 3300047471 Bacteria 1792
176 Ga0495686_0003458 3300047472 Bacteria 13684
177 Ga0495686_0181004 3300047472 Bacteria 1221
178 Ga0495602_0049382 3300048088 Bacteria 3769
179 Ga0495614_0004229 3300048089 Bacteria 6468
180 Ga0496126_0008926 3300048929 Bacteria 10735
181 Ga0495682_0002305 3300049460 Bacteria 9105
182 Ga0501033_0045225 3300049570 Bacteria 3276
183 Ga0501033_0071235 3300049570 Bacteria 2553
184 Ga0501033_0154006 3300049570 Bacteria 1657
185 Ga0501034_0013957 3300049571 Bacteria 8270
186 Ga0501034_0019007 3300049571 Bacteria 7038
187 Ga0501034_0144701 3300049571 Bacteria 2355
188 Ga0501036_0002033 3300049572 Bacteria 15755
189 Ga0501036_0064527 3300049572 Bacteria 3099
190 Ga0501036_0077854 3300049572 Bacteria 2805
191 Ga0501037_0011540 3300049573 Bacteria 6504
192 Ga0501038_0087773 3300049574 Bacteria 2612
193 Ga0501039_0013134 3300049575 Bacteria 6330
194 Ga0501039_0027164 3300049575 Bacteria 4401
195 Ga0501042_0021303 3300049578 Bacteria 4515
196 Ga0501043_0003111 3300049579 Bacteria 13757
197 Ga0501043_0010991 3300049579 Bacteria 7089
198 Ga0501046_0298926 3300049580 Bacteria 1176
199 Ga0501047_0026276 3300049581 Bacteria 5600
200 Ga0501048_0021577 3300049582 Bacteria 4715
201 Ga0501068_0105969 3300049584 Bacteria 1745
202 Ga0501070_0011738 3300049586 Bacteria 7399
203 Ga0501073_0013483 3300049589 Bacteria 5945
204 Ga0501074_0001433 3300049590 Bacteria 15931
205 Ga0501074_0007271 3300049590 Bacteria 8003
206 Ga0501035_0002152 3300049822 Bacteria 19561
207 Ga0501044_0003227 3300049823 Bacteria 18356
208 Ga0501044_0038860 3300049823 Bacteria 4969
209 Ga0501044_0404575 3300049823 Bacteria 1277
210 nmdc:mga05p37_318_c1 3300050507 Bacteria 51124
211 nmdc:mga0n895_113900_c1 3300050512 Bacteria 2722
212 nmdc:mga0n895_77382_c1 3300050512 Bacteria 3309
213 nmdc:mga0a205_7714_c1 3300050515 Bacteria 9765
214 Ga0500651_0059215 3300053093 Bacteria 2395
215 Ga0500572_024459 3300053111 Bacteria 1630
216 Ga0500595_000011 3300053119 Bacteria 268589
217 Ga0500573_0016580 3300053140 Bacteria 4182
218 Ga0500600_0110318 3300053149 Bacteria 1436
219 Ga0466962_0007455 3300061719 Bacteria 5249
220 2862512955 2862507626 Bacteria 9425308
221 2547406961 2547132111 Bacteria 8013147
222 2585309217 2582581313 Bacteria 10042643
223 2616901402 2616644941 Bacteria 8510691
224 2643762147 2643221548 Bacteria 8053412
225 2643901857 2643221578 Bacteria 9213798
226 2644263231 2643221647 Bacteria 10741251
227 2644408003 2643221673 Bacteria 9196637
228 2644436534 2643221678 Bacteria 9540101
229 2644459075 2643221682 Bacteria 6743283
230 2644550505 2643221699 Bacteria 5731501
231 2644625623 2643221714 Bacteria 9015452
232 2784587995 2784132148 Bacteria 8627943
233 2785368754 2784746768 Bacteria 10036182
234 2786669860 2786546132 Bacteria 10419719
235 2793978127 2791355406 Bacteria 11364898
236 2804849033 2802429296 Bacteria 7227771
237 2808841426 2808606359 Bacteria 9866990
238 2808919991 2808606375 Bacteria 9466072
239 2809231600 2808606448 Bacteria 8656184
240 2812358820 2811994879 Bacteria 9313447
241 2812481108 2811994917 Bacteria 7761064
242 2819699449 2818991463 Bacteria 7948711
243 2837184340 2837183177 Bacteria 4637169
244 2852641893 2852635781 Bacteria 8251373
245 2862184164 2862178590 Bacteria 8583590
246 2862287961 2862281513 Bacteria 9621493
247 2862291037 2862290372 Bacteria 7471434
248 2862392967 2862382967 Bacteria 10317375
249 2862579853 2862574272 Bacteria 10567477
250 2863405399 2863404153 Bacteria 9672205
251 2867479633 2867475112 Bacteria 6909112
252 2873153394 2873151551 Bacteria 8625867
253 2875397776 2875391855 Bacteria 7600475
254 2877681759 2877676314 Bacteria 9512378
255 2912720739 2912715099 Bacteria 9460473
256 2912724880 2912723979 Bacteria 8557534
257 2917554539 2917554339 Bacteria 4987857
258 2919055003 2919051321 Bacteria 4210889
259 2919473565 2919468124 Bacteria 9133025
260 2946046736 2946045630 Bacteria 8527308
261 2946067051 2946064051 Bacteria 8957905
262 2946075354 2946072368 Bacteria 8999607
263 2947230180 2947224130 Bacteria 9938529
264 2954386907 2954380949 Bacteria 10050426
265 2954676289 2954673503 Bacteria 9685905
266 2954687880 2954682443 Bacteria 9862841
267 2954704499 2954701450 Bacteria 10834262
268 2954716852 2954711539 Bacteria 10867210
269 2954726800 2954721474 Bacteria 10456478
270 2954734995 2954731030 Bacteria 10243860
271 2954745723 2954740390 Bacteria 10229294
272 2954753867 2954749733 Bacteria 10366972
273 2954764697 2954759201 Bacteria 9358192
274 2966599752 2966598605 Bacteria 7676064
275 2990065798 2990059506 Bacteria 9321252
276 2997456374 2997451912 Bacteria 8492419
277 2997608055 2997600082 Bacteria 9896405
278 3003000317 3002998708 Bacteria 11715108
279 3006426831 3006425503 Bacteria 6491253
280 3006501492 3006493962 Bacteria 8825450
281 8008559678 8008558824 Bacteria 10610750
282 8008579421 8008574985 Bacteria 7815457
283 8023631007 8023623736 Bacteria 8593882
284 8025418450 8025413630 Bacteria 7014048
285 8047898767 8047893842 Bacteria 11723082
286 8048131553 8048127548 Bacteria 11053136
287 8048360153 8048356638 Bacteria 11044339
288 8048375727 8048369669 Bacteria 11666822
289 8048382478 8048379754 Bacteria 11877923
290 8054164935 8054160619 Bacteria 7783213
291 8055067440 8055066027 Bacteria 9479577
292 8055176051 8055172936 Bacteria 9305943
293 8055179346 8055172936 Bacteria 9305943
294 8056447440 8056447290 Bacteria 7680491
295 8056668877 8056667051 Bacteria 6953971
296 rootH1_10032377
297 rootH1_10015361
298 JGI25160J50197_1008902
299 JGI25160J50197_1025164
300 Ga0055526_1000463
301 Ga0070658_10005026
302 Ga0070683_100019809
303 Ga0070689_100150771
304 Ga0070661_100075467
305 Ga0070714_100020615
306 Ga0070714_100060603
307 Ga0070705_100213285
308 Ga0070685_10116098
309 Ga0070684_100106917
310 Ga0068864_100327312
311 Ga0075363_100010456
312 Ga0070712_100176430
313 Ga0075436_100089333
314 Ga0111539_10526434
315 Ga0114129_10000977
316 Ga0157369_10020767
317 Ga0182008_10005624
318 Ga0182007_10002128
319 Ga0206353_10788804
320 Ga0213875_10086717
321 Ga0209564_1000043
322 Ga0209758_1016418
323 Ga0209256_1000374
324 Ga0207426_1001749
325 Ga0207426_1010839
326 Ga0207426_1040694
327 Ga0207647_10018789
328 Ga0207705_10270240
329 Ga0207707_10203675
330 Ga0207693_10032008
331 Ga0207693_10277629
332 Ga0207709_10068524
333 Ga0207665_10080143
334 Ga0207661_10073561
335 Ga0207679_10354124
336 Ga0207678_10095528
337 Ga0307517_10088716
338 Ga0307515_10000541
339 Ga0307511_10005628
340 Ga0307513_10265802
341 Ga0307509_10020123
342 Ga0307509_10021348
343 Ga0307508_10010039
344 Ga0307508_10020962
345 Ga0307508_10094344
346 Ga0307514_10080015
347 Ga0307516_10126650
348 Ga0307405_10018562
349 Ga0307413_10294849
350 Ga0307410_10079820
351 Ga0307410_10394082
352 Ga0307407_10181341
353 Ga0307409_100001500
354 Ga0307416_100050222
355 Ga0307414_10070410
356 Ga0307415_100001942
357 Ga0307415_100186410
358 Ga0307507_10021084
359 Ga0307507_10030364
360 Ga0307510_10054625
361 Ga0307510_10086040
362 Ga0395899_0001150
363 Ga0395900_0053852
364 Ga0395898_0013633
365 Ga0395905_0109225
366 Ga0395905_0157482
367 Ga0436364_0220764
368 Ga0395901_0028943
369 Ga0395901_0096940
370 Ga0395901_0549058
371 Ga0439433_0000374
372 Ga0439442_022691
373 Ga0439448_0001250
374 Ga0439448_0028790
375 Ga0439449_0008214
376 Ga0439449_0009303
377 Ga0439449_0015193
378 Ga0439450_000126
379 Ga0439454_021712
380 Ga0439455_0029827
381 Ga0439457_000938
382 Ga0439462_0007297
383 Ga0439463_001441
384 Ga0450902_002248
385 Ga0450902_010567
386 Ga0450903_000720
387 Ga0439444_0000010
388 Ga0439464_0008321
389 Ga0439460_0000965
390 Ga0466972_0029193
391 Ga0466972_0032749
392 Ga0466972_0047546
393 Ga0466965_0006945
394 Ga0466965_0125239
395 Ga0466966_0004137
396 Ga0466966_0009137
397 Ga0466966_0126837
398 Ga0466961_0002837
399 Ga0466961_0005533
400 Ga0466964_0022499
401 Ga0466971_0009115
402 Ga0466970_0001488
403 Ga0466970_0003950
404 Ga0466957_0076957
405 Ga0466960_0008432
406 Ga0466959_0004028
407 Ga0451576_0007914
408 Ga0466958_0004295
409 Ga0466967_0104595
410 Ga0466967_0200345
411 Ga0495617_021479
412 Ga0495629_0000707
413 Ga0495629_0006011
414 Ga0495629_0106226
415 Ga0495638_0046410
416 Ga0495638_0071651
417 Ga0495651_0012456
418 Ga0495605_0092814
419 Ga0495662_0003473
420 Ga0495664_0097180
421 Ga0495585_0029855
422 Ga0495594_0000260
423 Ga0495594_0057735
424 Ga0495594_0064073
425 Ga0495594_0155856
426 Ga0495607_0038172
427 Ga0495607_0074666
428 Ga0495583_0008860
429 Ga0495606_0129139
430 Ga0495618_0015177
431 Ga0495628_0032171
432 Ga0495630_0050733
433 Ga0495631_0047853
434 Ga0495644_0007976
435 Ga0495642_0067683
436 Ga0495652_0017915
437 Ga0495587_0004766
438 Ga0495609_0101534
439 Ga0495645_0025262
440 Ga0495622_0003092
441 Ga0495622_0009499
442 Ga0495634_0001005
443 Ga0495611_0003229
444 Ga0495625_0020564
445 Ga0495625_0058688
446 Ga0495635_0024236
447 Ga0495588_0002109
448 Ga0495588_0009466
449 Ga0495657_0001985
450 Ga0495646_0029076
451 Ga0495658_0005733
452 Ga0495613_0025670
453 Ga0495671_0001899
454 Ga0495649_0000165
455 Ga0495649_0034524
456 Ga0495589_0004123
457 Ga0495600_0053776
458 Ga0495660_0003952
459 Ga0495604_0000237
460 Ga0495636_0003544
461 Ga0495672_0001895
462 Ga0495676_0004323
463 Ga0495676_0009988
464 Ga0495683_0003480
465 Ga0495687_000551
466 Ga0495687_003518
467 Ga0495687_015321
468 Ga0495685_009358
469 Ga0495681_0000405
470 Ga0495684_0143070
471 Ga0495686_0003458
472 Ga0495686_0181004
473 Ga0495602_0049382
474 Ga0495614_0004229
475 Ga0496126_0008926
476 Ga0495682_0002305
477 Ga0501033_0045225
478 Ga0501033_0071235
479 Ga0501033_0154006
480 Ga0501034_0013957
481 Ga0501034_0019007
482 Ga0501034_0144701
483 Ga0501036_0002033
484 Ga0501036_0064527
485 Ga0501036_0077854
486 Ga0501037_0011540
487 Ga0501038_0087773
488 Ga0501039_0013134
489 Ga0501039_0027164
490 Ga0501042_0021303
491 Ga0501043_0003111
492 Ga0501043_0010991
493 Ga0501046_0298926
494 Ga0501047_0026276
495 Ga0501048_0021577
496 Ga0501068_0105969
497 Ga0501070_0011738
498 Ga0501073_0013483
499 Ga0501074_0001433
500 Ga0501074_0007271
501 Ga0501035_0002152
502 Ga0501044_0003227
503 Ga0501044_0038860
504 Ga0501044_0404575
505 nmdc:mga05p37_318_c1
506 nmdc:mga0n895_113900_c1
507 nmdc:mga0n895_77382_c1
508 nmdc:mga0a205_7714_c1
509 Ga0500651_0059215
510 Ga0500572_024459
511 Ga0500595_000011
512 Ga0500573_0016580
513 Ga0500600_0110318
514 Ga0466962_0007455
515 2862512955
516 2547406961
517 2585309217
518 2616901402
519 2643762147
520 2643901857
521 2644263231
522 2644408003
523 2644436534
524 2644459075
525 2644550505
526 2644625623
527 2784587995
528 2785368754
529 2786669860
530 2793978127
531 2804849033
532 2808841426
533 2808919991
534 2809231600
535 2812358820
536 2812481108
537 2819699449
538 2837184340
539 2852641893
540 2862184164
541 2862287961
542 2862291037
543 2862392967
544 2862579853
545 2863405399
546 2867479633
547 2873153394
548 2875397776
549 2877681759
550 2912720739
551 2912724880
552 2917554539
553 2919055003
554 2919473565
555 2946046736
556 2946067051
557 2946075354
558 2947230180
559 2954386907
560 2954676289
561 2954687880
562 2954704499
563 2954716852
564 2954726800
565 2954734995
566 2954745723
567 2954753867
568 2954764697
569 2966599752
570 2990065798
571 2997456374
572 2997608055
573 3003000317
574 3006426831
575 3006501492
576 8008559678
577 8008579421
578 8023631007
579 8025418450
580 8047898767
581 8048131553
582 8048360153
583 8048375727
584 8048382478
585 8054164935
586 8055067440
587 8055176051
588 8055179346
589 8056447440
590 8056668877

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00294

PfkB

pfkB family carbohydrate kinase

55

345

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3ces-assembly1.cif.gz_B crystal structure of e.coli mnmg (gida), a highly-conserved trna modifying enzyme 0.8894 4 60
3ces-assembly1.cif.gz_A crystal structure of e.coli mnmg (gida), a highly-conserved trna modifying enzyme 0.8887 4 60
3ces-assembly2.cif.gz_C crystal structure of e.coli mnmg (gida), a highly-conserved trna modifying enzyme 0.8872 4 60
3ces-assembly2.cif.gz_D crystal structure of e.coli mnmg (gida), a highly-conserved trna modifying enzyme 0.8852 4 60
6aio-assembly2.cif.gz_B crystal structure of p-nitrophenol 4-monooxygenase pnpa from pseudomonas putida dll-e4 0.8753 5 60
ID Description Score Start End Superfamily
4yshB01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8757 4 61 3.50.50.60
af_Q19133_1_311_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8626 5 270 3.40.1190.20
af_O77425_1_304_3.40.1190.20 Alpha Beta;3-Layer(aba) Sandwich;UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase;Ribokinase 0.8564 1 266 3.40.1190.20
2e57B01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8552 4 61 3.50.50.60
2hqmB01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.8535 4 60 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A7K2M6P5-F1-model_v4 Ribokinase 0.9628 60 199 GO:0005829
GO:0006796
GO:0016301
AF-D9XZC6-F1-model_v4 Ribokinase 0.948 1 225 GO:0004747
GO:0005524
GO:0005829
GO:0006014
GO:0046872
AF-A0A6P0WMR4-F1-model_v4 Ribokinase 0.9201 6 88 GO:0006796
GO:0016301
AF-A0A6P0QT27-F1-model_v4 deleted 0.9148 5 249
AF-A0A4R2TKD1-F1-model_v4 Ribokinase (EC 2.7.1.15) 0.913 4 252 GO:0004747
GO:0005524
GO:0005829
GO:0006014
GO:0046872

Map