F392863

General Info

Members Datasets Scaffolds Average Seq Length
295 231 204 435

Family's Representative Sequence

Representative Sequence 3300049569|Ga0501032_0112233|Ga0501032_0112233_186_1583
Length 465
Sequence MARPRRHIPLNVFLNGRLVGRLNRQSSGAIDFQYDLSWLAWEHALPVSLSLPLREDRYIGAPVIAVFDNLLPDSTPIRRRMAERVHAQGIDAYDLLAAVGRDCVGALQFLPDGVEPGVAGAIDGKPIDDKEIARLLGDLASAPLGLGEDEDFRISIAGAQEKTALLFWKERWYKPLATTATTHILKPQIGRLPNGIDLSYSVENEFFCLKLTAALGLPSAAVAIEEFEGNRVLVVERFDRRWTSDNRLLRLPQEDCCQALSVPPILKYESDGGPSIPAILNLLKGSDQPEADQTTFIKAVIAFWLLGATDGHAKNFSVFLSPGGRFRMTPLYDVISAQPSLDASQIKRNKMKLAMAVGNSRHYVVDSVMPRHFVQTAAKAGIGAGLVTAIFDELRAQAPAAIKQVTASLPKAFPVEVADSISNGLQLRRSQHHRLGCSVLVELFGAVAFDDFSRRHVFSYDRIIV

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
3 2511231035 Pantoea sp. GM01 Isolate Rhizosphere
4 2513237098 Bradyrhizobium elkanii WSM2783 Isolate Nodule
5 2513237305 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
6 2599185169 Klebsiella quasipneumoniae NFPP35 Isolate Rhizoplane
7 2600255254 Klebsiella quasipneumoniae NFIX15 Isolate Rhizoplane
8 2600255255 Klebsiella quasipneumoniae NFIX23 Isolate Rhizoplane
9 2600255280 Klebsiella quasipneumoniae NFIX42 Isolate Rhizoplane
10 2600255281 Klebsiella quasipneumoniae NFIX43 Isolate Rhizoplane
11 2600255287 Klebsiella quasipneumoniae NFIX11 Isolate Rhizoplane
12 2600255288 Klebsiella quasipneumoniae NFIX14 Isolate Rhizoplane
13 2600255289 Klebsiella quasipneumoniae NFIX16 Isolate Rhizoplane
14 2600255290 Klebsiella quasipneumoniae NFIX17 Isolate Rhizoplane
15 2600255291 Klebsiella quasipneumoniae NFIX19 Isolate Rhizoplane
16 2600255298 Klebsiella quasipneumoniae NFIX21 Isolate Rhizoplane
17 2600255299 Klebsiella quasipneumoniae NFIX22 Isolate Rhizoplane
18 2600255300 Klebsiella quasipneumoniae NFIX30 Isolate Rhizoplane
19 2600255301 Klebsiella quasipneumoniae NFIX33 Isolate Rhizoplane
20 2600255302 Klebsiella quasipneumoniae NFIX35 Isolate Rhizoplane
21 2600255303 Klebsiella quasipneumoniae NFIX36 Isolate Rhizoplane
22 2600255304 Klebsiella quasipneumoniae NFIX37 Isolate Rhizoplane
23 2600255305 Klebsiella quasipneumoniae NFIX41 Isolate Rhizoplane
24 2600255306 Klebsiella quasipneumoniae NFIX44 Isolate Rhizoplane
25 2600255307 Klebsiella quasipneumoniae NFIX56 Isolate Rhizoplane
26 2600255309 Klebsiella sp. NFIX53 Isolate Rhizoplane
27 2600255392 Klebsiella quasipneumoniae NFIX54 Isolate Rhizoplane
28 2602042052 Klebsiella quasipneumoniae NFIX18 Isolate Rhizoplane
29 2602042053 Klebsiella quasipneumoniae NFIX12 Isolate Rhizoplane
30 2602042103 Klebsiella quasipneumoniae NFIX29 Isolate Rhizoplane
31 2602042104 Klebsiella quasipneumoniae NFIX26 Isolate Rhizoplane
32 2602042105 Klebsiella quasipneumoniae NFIX25 Isolate Rhizoplane
33 2602042106 Klebsiella quasipneumoniae NFIX13 Isolate Rhizoplane
34 2602042110 Klebsiella quasipneumoniae NFIX40 Isolate Rhizoplane
35 2602042111 Klebsiella quasipneumoniae NFIX20 Isolate Rhizoplane
36 2603880178 Klebsiella quasipneumoniae NFIX34 Isolate Rhizoplane
37 2603880184 Klebsiella quasipneumoniae NFIX27 Isolate Rhizoplane
38 2603880202 Klebsiella quasipneumoniae NFIX38 Isolate Rhizoplane
39 2603880211 Klebsiella quasipneumoniae NFIX24 Isolate Rhizoplane
40 2636415599 Klebsiella variicola DX120E Isolate Unclassified
41 2643221603 Noviherbaspirillum sp. Root189 Isolate Unclassified
42 2667528172 Enterobacteriaceae bacterium NFIX31 Isolate Rhizoplane
43 2675903046 Klebsiella quasipneumoniae NFIX52 Isolate Rhizoplane
44 2681812869 Enterobacter ludwigii NFPP41 Isolate Rhizoplane
45 2721755523 Delftia sp. HK171 Isolate Unclassified
46 2721755686 Mesorhizobium amorphae CCNWGS0123 Isolate Nodule
47 2775507074 Klebsiella sp. D5A Isolate Unclassified
48 2786546548 Spartobacteria bacterium LR76 Isolate Unclassified
49 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
50 2844528606 Pantoea sp. R-72498 v. 2 Isolate Unclassified
51 2865014394 Pantoea sp. R-71966 Isolate Unclassified
52 2871474448 Mesorhizobium sp. M6A.T.Cr.TU.017.01.1.1 Isolate Nodule
53 2876369609 Mesorhizobium sp. USDA-HM6 Isolate Unclassified
54 2878788777 Mesorhizobium sp. M6A.T.Ca.TU.002.02.2.1 Isolate Nodule
55 2881147464 Mesorhizobium sp. M1B.F.Ca.ET.045.04.1.1 Isolate Nodule
56 2881609920 Pantoea sp. ARC607 Isolate Rhizosphere
57 2882632389 Mesorhizobium waimense ICMP19557 Isolate Unclassified
58 2883291878 Hypericibacter terrae R5913 Isolate Rhizosphere
59 2885305155 Mesorhizobium sp. M1E.F.Ca.ET.045.02.1.1 Isolate Nodule
60 2885334103 Mesorhizobium sp. M1E.F.Ca.ET.063.01.1.1 Isolate Nodule
61 2885383462 Bradyrhizobium sp. Leo170 Isolate Unclassified
62 2888378607 Bradyrhizobium sp. LCT2 Isolate Unclassified
63 2889914905 Chelativorans alearense UJN715 Isolate Rhizosphere
64 2903768456 Bradyrhizobium sp. Leo121 Isolate Unclassified
65 2904513164 Klebsiella variicola 1431 Isolate Rhizosphere
66 2932406140 Serratia sp. 2723 Isolate Rhizosphere
67 2932410948 Janthinobacterium lividum 2829 Isolate Rhizosphere
68 2932416698 Janthinobacterium lividum 2830 Isolate Rhizosphere
69 2935630451 Bradyrhizobium sp. I1.14.4 Isolate Nodule
70 2937836603 Mesorhizobium sp. M6A.T.Cr.TU.014.01.1.1 Isolate Nodule
71 2939577877 Serratia sp. 509 Isolate Rhizosphere
72 2939617950 Kosakonia cowanii 2056 Isolate Rhizosphere
73 2941507105 Bradyrhizobium sp. i1.12.3 Isolate Nodule
74 2941515067 Bradyrhizobium sp. i1.14.1 Isolate Nodule
75 2941523033 Bradyrhizobium sp. i1.8.4 Isolate Nodule
76 2945951305 Pantoea agglomerans W2I1 Isolate Rhizosphere
77 2958071322 Mesorhizobium sp. M6A.T.Ce.TU.016.01.1.1 Isolate Nodule
78 2968117919 Mesorhizobium atlanticum CNPSo 3140 Isolate Unclassified
79 2969079654 Klebsiella variicola E57-7 Isolate Unclassified
80 2974310843 Enterobacter sp. SORGH_AS 287 Isolate Unclassified
81 2977922695 Mesorhizobium sp. WSM4305 Isolate Unclassified
82 2978975091 Pantoea anthophila SORGH_AS 797 Isolate Unclassified
83 2984559226 Klebsiella variicola SORGH_AS834 Isolate Aerial Root
84 2984595703 Klebsiella variicola SORGH_AS1070 Isolate Aerial Root
85 2996310559 Mesorhizobium zhangyense CGMCC 1.15528 Isolate Unclassified
86 3004211236 Mesorhizobium sp. WSM4307 Isolate Unclassified
87 3004218560 Mesorhizobium sp. WSM4315 Isolate Unclassified
88 3005474847 Bradyrhizobium sp. CCBAU 53421 Isolate Nodule
89 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
90 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
91 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
92 3300003856 Agave microbial communities from Guanajuato, Mexico - At.Am.rz Metagenome Rhizosphere
93 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
94 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
95 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
96 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
97 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
98 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
99 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
100 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
101 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
102 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
103 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
104 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
105 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
106 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
107 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
108 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
109 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
110 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
111 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
112 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
113 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
114 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
115 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
116 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
117 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
118 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
119 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
120 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
121 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
122 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
123 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
124 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
125 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
126 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
127 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
128 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
129 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
130 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
131 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
132 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
133 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
134 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
135 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
136 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
137 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
138 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
139 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
140 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
141 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
142 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
143 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
144 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
145 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
146 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
147 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
148 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
149 3300027312 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (SPAdes) (version 2) Metagenome Rhizosphere
150 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
151 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
152 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
153 3300030500 Agave microbial communities from Guanajuato, Mexico - At.Am.rz (v2) (version 3) Metagenome Rhizosphere
154 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
155 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
156 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
157 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
158 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
159 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
160 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
161 3300038741 Seagrass microbial communities from Seahorse Key, FL, USA - SV0818 Metagenome Unclassified
162 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
163 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
164 3300041507 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_10 MetaG Metagenome Unclassified
165 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
166 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
167 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
168 3300046452 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 rhizosphere Metagenome Rhizosphere
169 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
170 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
171 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
172 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
173 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
174 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
175 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
176 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
177 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
178 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
179 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
180 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
181 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
182 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
183 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
184 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
185 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
186 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
187 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
188 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
189 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
190 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
191 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
192 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
193 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
194 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
195 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
196 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
197 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
198 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
199 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
200 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
201 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
202 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
203 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
204 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
205 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
206 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
207 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
208 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
209 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
210 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
211 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
212 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
213 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
214 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
215 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
216 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
217 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
218 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
219 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
220 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
221 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
222 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
223 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
224 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
225 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
226 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
227 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
228 8004633249 Mesorhizobium sp. M6A.T.Ce.TU.002.03.1.1 Isolate Nodule
229 8019504834 Atlantibacter hermannii 1903 Isolate Rhizosphere
230 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
231 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 69.15
Metatranscriptomes 0
Isolates 30.85

Biome Distribution

Category Percentage (%)
Aerial Root 0.68
Bulb 0
Endosphere 7.46
Nodule 8.81
Rhizoplane 13.9
Rhizosphere 47.8
Stem 0
Stem Tuber 0
Unclassified 21.36

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_1567849 2162886007 Bacteria 113293
2 JGI24739J22299_10016437 3300001989 Bacteria 2678
3 JGI25155J39150_1000063 3300002704 Bacteria 70637
4 rootH1_10006378 3300003316 Bacteria 14178
5 Ga0058692_1000055 3300003856 Bacteria 105550
6 Ga0058692_1016395 3300003856 Bacteria 1647
7 Ga0065704_10070156 3300005289 Bacteria 213945
8 Ga0065707_10127801 3300005295 Bacteria 1977
9 Ga0070666_10000281 3300005335 Bacteria 33725
10 Ga0070668_100000788 3300005347 Bacteria 21828
11 Ga0070668_100079655 3300005347 Bacteria 2565
12 Ga0070667_100000147 3300005367 Bacteria 88345
13 Ga0070713_100004896 3300005436 Bacteria 9087
14 Ga0070662_100011485 3300005457 Bacteria 5844
15 Ga0068853_100036009 3300005539 Bacteria 4206
16 Ga0070665_100000165 3300005548 Bacteria 120411
17 Ga0068855_100037739 3300005563 Bacteria 5743
18 Ga0068855_100084765 3300005563 Bacteria 3667
19 Ga0068856_100098558 3300005614 Bacteria 2913
20 Ga0068852_100248540 3300005616 Bacteria 1703
21 Ga0068863_100000117 3300005841 Bacteria 83006
22 Ga0068860_100012784 3300005843 Bacteria 8253
23 Ga0070717_10006239 3300006028 Bacteria 8757
24 Ga0075368_10014135 3300006042 Bacteria 2944
25 Ga0075363_100014682 3300006048 Bacteria 3835
26 Ga0075364_10000453 3300006051 Bacteria 20674
27 Ga0075364_10076789 3300006051 Bacteria 2204
28 Ga0075367_10011748 3300006178 Bacteria 4647
29 Ga0075431_100082623 3300006847 Unclassified 3316
30 Ga0079104_1000034 3300006946 Bacteria 199368
31 Ga0079104_1000106 3300006946 Bacteria 122792
32 Ga0079104_1000160 3300006946 Bacteria 95415
33 Ga0079104_1003730 3300006946 Bacteria 6887
34 Ga0105251_10000145 3300009011 Bacteria 72430
35 Ga0105251_10001514 3300009011 Bacteria 19969
36 Ga0105251_10045908 3300009011 Bacteria 2104
37 Ga0105244_10000026 3300009036 Bacteria 216056
38 Ga0105244_10000118 3300009036 Bacteria 83868
39 Ga0105244_10000774 3300009036 Bacteria 27309
40 Ga0105250_10000009 3300009092 Bacteria 330307
41 Ga0105240_10151711 3300009093 Bacteria 2759
42 Ga0105240_10166148 3300009093 Bacteria 2617
43 Ga0105243_10009390 3300009148 Bacteria 7453
44 Ga0105243_10014837 3300009148 Bacteria 5895
45 Ga0105237_10018826 3300009545 Bacteria 7141
46 Ga0105237_10084118 3300009545 Bacteria 3172
47 Ga0105239_10025778 3300010375 Bacteria 6475
48 Ga0105246_10038588 3300011119 Bacteria 3213
49 Ga0105246_10057749 3300011119 Bacteria 2686
50 Ga0157373_10000247 3300013100 Bacteria 44227
51 Ga0157370_10000111 3300013104 Bacteria 94446
52 Ga0157370_10147474 3300013104 Bacteria 2190
53 Ga0157374_10010473 3300013296 Bacteria 7976
54 Ga0157372_10004043 3300013307 Bacteria 15719
55 Ga0157372_10074523 3300013307 Bacteria 3827
56 Ga0182008_10000035 3300014497 Bacteria 136502
57 Ga0157376_10173692 3300014969 Bacteria 1964
58 Ga0182006_1012070 3300015261 Bacteria 3784
59 Ga0182007_10047911 3300015262 Bacteria 1413
60 Ga0209564_1000718 3300025295 Bacteria 47576
61 Ga0207696_1000005 3300025711 Bacteria 642078
62 Ga0207696_1001912 3300025711 Bacteria 10606
63 Ga0207655_1000057 3300025728 Bacteria 273598
64 Ga0207655_1000427 3300025728 Bacteria 56657
65 Ga0207655_1002808 3300025728 Bacteria 13506
66 Ga0207655_1032834 3300025728 Bacteria 2365
67 Ga0207713_1000002 3300025735 Bacteria 1061749
68 Ga0207713_1002050 3300025735 Bacteria 15083
69 Ga0207680_10004665 3300025903 Bacteria 6508
70 Ga0207647_10001109 3300025904 Bacteria 20713
71 Ga0207695_10035873 3300025913 Bacteria 5368
72 Ga0207681_10017243 3300025923 Bacteria 4532
73 Ga0207700_10009248 3300025928 Bacteria 6148
74 Ga0207700_10062882 3300025928 Bacteria 2821
75 Ga0207664_10110387 3300025929 Bacteria 2287
76 Ga0207706_10001035 3300025933 Bacteria 28246
77 Ga0207709_10000200 3300025935 Bacteria 79228
78 Ga0207709_10000529 3300025935 Bacteria 33218
79 Ga0207667_10046327 3300025949 Bacteria 4604
80 Ga0207667_10078111 3300025949 Bacteria 3431
81 Ga0207668_10001098 3300025972 Bacteria 16110
82 Ga0207668_10085951 3300025972 Bacteria 2296
83 Ga0207658_10000117 3300025986 Bacteria 88361
84 Ga0207639_10044617 3300026041 Bacteria 3335
85 Ga0207702_10065373 3300026078 Bacteria 3115
86 Ga0207641_10000085 3300026088 Bacteria 133497
87 Ga0209281_1000005 3300027111 Bacteria 1242284
88 Ga0209281_1000024 3300027111 Bacteria 499062
89 Ga0209281_1000038 3300027111 Bacteria 361154
90 Ga0209281_1000161 3300027111 Bacteria 159827
91 Ga0209371_1000075 3300027312 Bacteria 196676
92 Ga0209371_1002598 3300027312 Bacteria 9907
93 Ga0209371_1002994 3300027312 Bacteria 8758
94 Ga0209813_10011926 3300027866 Bacteria 2284
95 Ga0268266_10000154 3300028379 Bacteria 129538
96 Ga0307515_10225095 3300028794 Bacteria 1683
97 Ga0268256_1000068 3300030500 Bacteria 196676
98 Ga0268256_1002309 3300030500 Bacteria 9877
99 Ga0307508_10003798 3300031616 Bacteria 15078
100 Ga0316577_10056014 3300031733 Unclassified 2200
101 Ga0316574_0018465 3300035398 Bacteria 4098
102 Ga0316582_0007442 3300036647 Bacteria 5829
103 Ga0316584_0026368 3300036712 Bacteria 4271
104 Ga0395900_0056100 3300037418 Bacteria 4056
105 Ga0395905_0001719 3300037471 Bacteria 25705
106 Ga0400488_18667 3300038741 Bacteria 2831
107 Ga0439447_011580 3300041407 Bacteria 2567
108 Ga0439466_0000009 3300041411 Bacteria 232657
109 Ga0451851_0909960 3300041507 Bacteria 1859
110 Ga0450907_000919 3300042146 Bacteria 7026
111 Ga0466972_0000637 3300044658 Bacteria 16995
112 Ga0466957_0063614 3300044842 Bacteria 2268
113 Ga0495617_058198 3300046452 Unclassified 1281
114 Ga0495627_004226 3300046453 Bacteria 6072
115 Ga0495591_000012 3300046458 Bacteria 274403
116 Ga0495650_0005457 3300046471 Bacteria 8253
117 Ga0495584_0000013 3300046491 Bacteria 185735
118 Ga0495585_0001052 3300046492 Bacteria 22828
119 Ga0495607_0000050 3300046501 Bacteria 120052
120 Ga0495620_0009237 3300046515 Bacteria 5251
121 Ga0495648_0002293 3300046524 Bacteria 17855
122 Ga0495654_0000021 3300046530 Bacteria 270163
123 Ga0495633_0010364 3300046558 Bacteria 5091
124 Ga0495668_0086638 3300046616 Bacteria 1718
125 Ga0495671_0035811 3300046692 Bacteria 2519
126 Ga0495660_0027726 3300046810 Bacteria 3202
127 Ga0495672_0000053 3300047320 Bacteria 233823
128 Ga0495679_003002 3300047446 Bacteria 8308
129 Ga0495679_004861 3300047446 Bacteria 6068
130 Ga0495686_0000047 3300047472 Bacteria 280086
131 Ga0496103_0038233 3300048906 Bacteria 2943
132 Ga0496105_0004613 3300048908 Bacteria 10383
133 Ga0496106_0054627 3300048909 Bacteria 3018
134 Ga0496111_0020435 3300048914 Bacteria 4610
135 Ga0496116_0015778 3300048919 Bacteria 5951
136 Ga0496117_0000172 3300048920 Bacteria 134425
137 Ga0496117_0000268 3300048920 Bacteria 98537
138 Ga0496117_0013027 3300048920 Bacteria 7282
139 Ga0496118_0000774 3300048921 Bacteria 51332
140 Ga0496118_0001097 3300048921 Bacteria 42117
141 Ga0496118_0003126 3300048921 Bacteria 21206
142 Ga0496119_0000015 3300048922 Bacteria 312979
143 Ga0496119_0000162 3300048922 Bacteria 92734
144 Ga0496119_0000307 3300048922 Bacteria 68310
145 Ga0496119_0000348 3300048922 Bacteria 64966
146 Ga0496119_0000402 3300048922 Bacteria 59398
147 Ga0496120_0000004 3300048923 Bacteria 534793
148 Ga0496120_0000029 3300048923 Bacteria 229859
149 Ga0496120_0000107 3300048923 Bacteria 139739
150 Ga0496120_0000323 3300048923 Bacteria 79339
151 Ga0496120_0000452 3300048923 Bacteria 64992
152 Ga0496121_0000273 3300048924 Bacteria 107207
153 Ga0496121_0002972 3300048924 Bacteria 24695
154 Ga0496122_0000069 3300048925 Bacteria 223795
155 Ga0496122_0058718 3300048925 Bacteria 2845
156 Ga0496123_0000071 3300048926 Bacteria 199821
157 Ga0496123_0024157 3300048926 Bacteria 4628
158 Ga0496123_0043287 3300048926 Bacteria 3095
159 Ga0496124_0000216 3300048927 Bacteria 112485
160 Ga0496124_0020320 3300048927 Bacteria 6142
161 Ga0496124_0031424 3300048927 Bacteria 4700
162 Ga0496124_0038386 3300048927 Bacteria 4159
163 Ga0496125_0004114 3300048928 Bacteria 16993
164 Ga0496125_0016228 3300048928 Bacteria 7159
165 Ga0496125_0027629 3300048928 Bacteria 5140
166 Ga0496126_0019862 3300048929 Bacteria 6606
167 Ga0496126_0020091 3300048929 Bacteria 6558
168 Ga0496126_0066902 3300048929 Bacteria 3212
169 Ga0496126_0131800 3300048929 Bacteria 2159
170 Ga0496126_0149137 3300048929 Bacteria 2006
171 Ga0496126_0199987 3300048929 Bacteria 1688
172 Ga0501032_0112233 3300049569 Bacteria 1803
173 Ga0501033_0077365 3300049570 Bacteria 2441
174 Ga0501034_0007579 3300049571 Bacteria 11549
175 Ga0501037_0059996 3300049573 Bacteria 2774
176 Ga0501038_0001243 3300049574 Bacteria 23113
177 Ga0501038_0002220 3300049574 Bacteria 18066
178 Ga0501047_0036684 3300049581 Bacteria 4739
179 Ga0501047_0079510 3300049581 Bacteria 3152
180 Ga0501069_0036371 3300049585 Bacteria 2715
181 Ga0501070_0003580 3300049586 Bacteria 13431
182 Ga0501072_0238085 3300049588 Bacteria 1449
183 Ga0501080_0251750 3300049742 Bacteria 1611
184 Ga0501035_0011935 3300049822 Bacteria 8040
185 Ga0501035_0072183 3300049822 Bacteria 3056
186 Ga0501044_0017030 3300049823 Bacteria 7798
187 Ga0501044_0021733 3300049823 Bacteria 6841
188 nmdc:mga03683_4432_c1 3300050489 Bacteria 4658
189 nmdc:mga03n38_7509_c1 3300050490 Bacteria 3860
190 nmdc:mga00v17_2716_c1 3300050491 Bacteria 9085
191 nmdc:mga06z11_1234_c1 3300050494 Bacteria 9446
192 nmdc:mga06z11_18047_c1 3300050494 Bacteria 3216
193 nmdc:mga07m45_82437_c1 3300050496 Bacteria 1837
194 nmdc:mga09592_67300_c1 3300050508 Bacteria 3037
195 nmdc:mga06r32_60742_c1 3300050510 Unclassified 3638
196 Ga0500610_0008268 3300053079 Bacteria 4520
197 Ga0500578_0019808 3300053086 Bacteria 4322
198 Ga0500651_0008438 3300053093 Bacteria 6064
199 Ga0500650_0027015 3300053098 Bacteria 2580
200 Ga0500593_005093 3300053117 Bacteria 5143
201 Ga0500618_011398 3300053125 Bacteria 2358
202 Ga0500652_000544 3300053131 Bacteria 13166
203 Ga0500634_0003019 3300053161 Bacteria 7346
204 Ga0500645_008189 3300053730 Bacteria 3587

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005457 Ga0070662_100011485 Ga0070662_1000114856 374
2 3300025933 Ga0207706_10001035 Ga0207706_100010352 374
3 iso_pu_bacteria 8019555841 8019564357 377
4 iso_pu_bacteria 8019565922 8019574437 377
5 3300041407 Ga0439447_011580 Ga0439447_011580_1389_2534 378
6 iso_pu_bacteria 2882632389 2882634506 380
7 3300049588 Ga0501072_0238085 Ga0501072_0238085_202_1380 382
8 3300046452 Ga0495617_058198 Ga0495617_058198_55_1230 390
9 iso_pu_bacteria 2885334103 2885339115 399
10 3300031733 Ga0316577_10056014 Ga0316577_100560141 402
11 3300035398 Ga0316574_0018465 Ga0316574_0018465_2231_3493 402
12 3300036647 Ga0316582_0007442 Ga0316582_0007442_829_2091 402
13 3300036712 Ga0316584_0026368 Ga0316584_0026368_2471_3733 402
14 iso_pu_bacteria 2885305155 2885311923 410
15 3300048909 Ga0496106_0054627 Ga0496106_0054627_498_1805 411
16 3300037471 Ga0395905_0001719 Ga0395905_0001719_4599_5903 413
17 3300049585 Ga0501069_0036371 Ga0501069_0036371_920_2233 414
18 3300049586 Ga0501070_0003580 Ga0501070_0003580_7485_8798 414
19 3300049822 Ga0501035_0072183 Ga0501035_0072183_1508_2821 414
20 3300044842 Ga0466957_0063614 Ga0466957_0063614_573_1853 416
21 3300046501 Ga0495607_0000050 Ga0495607_0000050_66703_68046 421
22 3300050494 nmdc:mga06z11_18047_c1 nmdc:mga06z11_18047_c1_103_1389 421
23 3300050496 nmdc:mga07m45_82437_c1 nmdc:mga07m45_82437_c1_200_1486 421
24 iso_pu_bacteria 2786546548 2787506295 421
25 3300028794 Ga0307515_10225095 Ga0307515_102250952 422
26 3300046453 Ga0495627_004226 Ga0495627_004226_3596_4918 422
27 3300046515 Ga0495620_0009237 Ga0495620_0009237_2494_3816 422
28 3300046616 Ga0495668_0086638 Ga0495668_0086638_117_1439 422
29 3300046692 Ga0495671_0035811 Ga0495671_0035811_246_1568 422
30 3300053079 Ga0500610_0008268 Ga0500610_0008268_2231_3553 422
31 3300053117 Ga0500593_005093 Ga0500593_005093_3177_4499 422
32 3300053161 Ga0500634_0003019 Ga0500634_0003019_836_2158 422
33 iso_pu_bacteria 2721755523 2722884719 422
34 iso_pu_bacteria 2839138175 2839139074 422
35 3300046558 Ga0495633_0010364 Ga0495633_0010364_2565_3887 423
36 3300048922 Ga0496119_0000015 Ga0496119_0000015_124276_125589 423
37 3300048923 Ga0496120_0000029 Ga0496120_0000029_104271_105584 423
38 iso_pu_bacteria 2510917020 2511121357 423
39 iso_pu_bacteria 2513237098 2513671743 423
40 iso_pu_bacteria 2513237305 2514421059 423
41 iso_pu_bacteria 2721755686 2723572239 423
42 iso_pu_bacteria 2871474448 2871476710 423
43 iso_pu_bacteria 2876369609 2876377029 423
44 iso_pu_bacteria 2878788777 2878790497 423
45 iso_pu_bacteria 2881147464 2881153918 423
46 iso_pu_bacteria 2883291878 2883292043 423
47 iso_pu_bacteria 2885383462 2885389116 423
48 iso_pu_bacteria 2888378607 2888380887 423
49 iso_pu_bacteria 2889914905 2889916012 423
50 iso_pu_bacteria 2903768456 2903776247 423
51 iso_pu_bacteria 2935630451 2935637771 423
52 iso_pu_bacteria 2937836603 2937838500 423
53 iso_pu_bacteria 2941507105 2941514444 423
54 iso_pu_bacteria 2941515067 2941522340 423
55 iso_pu_bacteria 2941523033 2941530211 423
56 iso_pu_bacteria 2958071322 2958074653 423
57 iso_pu_bacteria 2968117919 2968120041 423
58 iso_pu_bacteria 2977922695 2977924880 423
59 iso_pu_bacteria 2996310559 2996311506 423
60 iso_pu_bacteria 3004211236 3004212380 423
61 iso_pu_bacteria 3004218560 3004224265 423
62 iso_pu_bacteria 3005474847 3005476514 423
63 iso_pu_bacteria 8004633249 8004634571 423
64 3300037418 Ga0395900_0056100 Ga0395900_0056100_2575_3891 424
65 3300005335 Ga0070666_10000281 Ga0070666_1000028118 425
66 3300005347 Ga0070668_100000788 Ga0070668_10000078816 425
67 3300005367 Ga0070667_100000147 Ga0070667_10000014712 425
68 3300005563 Ga0068855_100084765 Ga0068855_1000847653 425
69 3300005616 Ga0068852_100248540 Ga0068852_1002485402 425
70 3300005841 Ga0068863_100000117 Ga0068863_10000011723 425
71 3300005843 Ga0068860_100012784 Ga0068860_1000127843 425
72 3300009093 Ga0105240_10166148 Ga0105240_101661484 425
73 3300013104 Ga0157370_10147474 Ga0157370_101474742 425
74 3300013296 Ga0157374_10010473 Ga0157374_100104735 425
75 3300014969 Ga0157376_10173692 Ga0157376_101736922 425
76 3300025295 Ga0209564_1000718 Ga0209564_10007187 425
77 3300025903 Ga0207680_10004665 Ga0207680_100046652 425
78 3300025913 Ga0207695_10035873 Ga0207695_100358732 425
79 3300025923 Ga0207681_10017243 Ga0207681_100172431 425
80 3300025949 Ga0207667_10078111 Ga0207667_100781114 425
81 3300025972 Ga0207668_10001098 Ga0207668_1000109819 425
82 3300025986 Ga0207658_10000117 Ga0207658_1000011710 425
83 3300026088 Ga0207641_10000085 Ga0207641_1000008571 425
84 3300001989 JGI24739J22299_10016437 JGI24739J22299_100164372 426
85 3300005295 Ga0065707_10127801 Ga0065707_101278011 426
86 3300005436 Ga0070713_100004896 Ga0070713_1000048967 426
87 3300005539 Ga0068853_100036009 Ga0068853_1000360095 426
88 3300005563 Ga0068855_100037739 Ga0068855_1000377396 426
89 3300005614 Ga0068856_100098558 Ga0068856_1000985582 426
90 3300006028 Ga0070717_10006239 Ga0070717_100062392 426
91 3300006042 Ga0075368_10014135 Ga0075368_100141356 426
92 3300006048 Ga0075363_100014682 Ga0075363_1000146823 426
93 3300006051 Ga0075364_10000453 Ga0075364_100004536 426
94 3300006051 Ga0075364_10076789 Ga0075364_100767892 426
95 3300006178 Ga0075367_10011748 Ga0075367_100117482 426
96 3300006847 Ga0075431_100082623 Ga0075431_1000826232 426
97 3300006946 Ga0079104_1000034 Ga0079104_100003480 426
98 3300009093 Ga0105240_10151711 Ga0105240_101517112 426
99 3300009148 Ga0105243_10014837 Ga0105243_100148372 426
100 3300009545 Ga0105237_10018826 Ga0105237_100188262 426
101 3300009545 Ga0105237_10084118 Ga0105237_100841184 426
102 3300010375 Ga0105239_10025778 Ga0105239_100257782 426
103 3300025904 Ga0207647_10001109 Ga0207647_1000110930 426
104 3300025928 Ga0207700_10009248 Ga0207700_100092486 426
105 3300025928 Ga0207700_10062882 Ga0207700_100628822 426
106 3300025929 Ga0207664_10110387 Ga0207664_101103873 426
107 3300025935 Ga0207709_10000200 Ga0207709_1000020070 426
108 3300025949 Ga0207667_10046327 Ga0207667_100463276 426
109 3300026041 Ga0207639_10044617 Ga0207639_100446172 426
110 3300026078 Ga0207702_10065373 Ga0207702_100653732 426
111 3300027111 Ga0209281_1000005 Ga0209281_100000579 426
112 3300027866 Ga0209813_10011926 Ga0209813_100119263 426
113 3300038741 Ga0400488_18667 Ga0400488_18667_1036_2358 426
114 3300048914 Ga0496111_0020435 Ga0496111_0020435_3270_4595 426
115 3300048925 Ga0496122_0058718 Ga0496122_0058718_1108_2448 426
116 3300048927 Ga0496124_0038386 Ga0496124_0038386_791_2104 426
117 3300048928 Ga0496125_0004114 Ga0496125_0004114_9568_10893 426
118 3300048928 Ga0496125_0016228 Ga0496125_0016228_1699_3039 426
119 3300048929 Ga0496126_0149137 Ga0496126_0149137_397_1716 426
120 3300049569 Ga0501032_0112233 Ga0501032_0112233_186_1583 426
121 3300049570 Ga0501033_0077365 Ga0501033_0077365_219_1544 426
122 3300049571 Ga0501034_0007579 Ga0501034_0007579_3831_5159 426
123 3300049573 Ga0501037_0059996 Ga0501037_0059996_1373_2680 426
124 3300049574 Ga0501038_0001243 Ga0501038_0001243_16909_18216 426
125 3300049574 Ga0501038_0002220 Ga0501038_0002220_15872_17197 426
126 3300049581 Ga0501047_0036684 Ga0501047_0036684_926_2251 426
127 3300049581 Ga0501047_0079510 Ga0501047_0079510_1290_2597 426
128 3300049742 Ga0501080_0251750 Ga0501080_0251750_256_1563 426
129 3300049822 Ga0501035_0011935 Ga0501035_0011935_903_2228 426
130 3300049823 Ga0501044_0017030 Ga0501044_0017030_2043_3350 426
131 3300049823 Ga0501044_0021733 Ga0501044_0021733_4591_5916 426
132 3300050489 nmdc:mga03683_4432_c1 nmdc:mga03683_4432_c1_2535_3857 426
133 3300050490 nmdc:mga03n38_7509_c1 nmdc:mga03n38_7509_c1_1038_2342 426
134 3300050491 nmdc:mga00v17_2716_c1 nmdc:mga00v17_2716_c1_2056_3378 426
135 3300050494 nmdc:mga06z11_1234_c1 nmdc:mga06z11_1234_c1_667_1971 426
136 3300050508 nmdc:mga09592_67300_c1 nmdc:mga09592_67300_c1_1552_2871 426
137 3300050510 nmdc:mga06r32_60742_c1 nmdc:mga06r32_60742_c1_1821_3140 426
138 3300053098 Ga0500650_0027015 Ga0500650_0027015_1125_2432 426
139 3300002704 JGI25155J39150_1000063 JGI25155J39150_100006344 427
140 3300048929 Ga0496126_0131800 Ga0496126_0131800_287_1597 427
141 3300048929 Ga0496126_0199987 Ga0496126_0199987_315_1625 427
142 3300053093 Ga0500651_0008438 Ga0500651_0008438_10_1368 427
143 3300053131 Ga0500652_000544 Ga0500652_000544_2847_4169 427
144 iso_pu_bacteria 2643221603 2644026397 427
145 iso_pu_bacteria 2932410948 2932411891 427
146 iso_pu_bacteria 2932416698 2932418542 427
147 3300009148 Ga0105243_10009390 Ga0105243_100093906 429
148 3300025935 Ga0207709_10000529 Ga0207709_100005298 429
149 3300044658 Ga0466972_0000637 Ga0466972_0000637_1379_2710 429
150 3300048906 Ga0496103_0038233 Ga0496103_0038233_1183_2520 429
151 3300053086 Ga0500578_0019808 Ga0500578_0019808_583_1923 429
152 3300053730 Ga0500645_008189 Ga0500645_008189_592_1932 429
153 iso_pu_bacteria 2932406140 2932406995 429
154 iso_pu_bacteria 2939577877 2939579596 429
155 3300003316 rootH1_10006378 rootH1_1000637811 430
156 3300014497 Ga0182008_10000035 Ga0182008_1000003597 430
157 3300031616 Ga0307508_10003798 Ga0307508_100037982 430
158 3300046491 Ga0495584_0000013 Ga0495584_0000013_6324_7655 430
159 3300046492 Ga0495585_0001052 Ga0495585_0001052_7590_8921 430
160 3300047472 Ga0495686_0000047 Ga0495686_0000047_27230_28576 430
161 3300053125 Ga0500618_011398 Ga0500618_011398_975_2324 430
162 iso_pu_bacteria 2599185169 2599409447 430
163 iso_pu_bacteria 2600255254 2601522059 430
164 iso_pu_bacteria 2600255255 2601527084 430
165 iso_pu_bacteria 2600255280 2601613914 430
166 iso_pu_bacteria 2600255281 2601618637 430
167 iso_pu_bacteria 2600255287 2601642735 430
168 iso_pu_bacteria 2600255288 2601647606 430
169 iso_pu_bacteria 2600255289 2601652062 430
170 iso_pu_bacteria 2600255290 2601657389 430
171 iso_pu_bacteria 2600255291 2601662556 430
172 iso_pu_bacteria 2600255298 2601695513 430
173 iso_pu_bacteria 2600255299 2601700189 430
174 iso_pu_bacteria 2600255300 2601705186 430
175 iso_pu_bacteria 2600255301 2601710215 430
176 iso_pu_bacteria 2600255302 2601715227 430
177 iso_pu_bacteria 2600255303 2601720540 430
178 iso_pu_bacteria 2600255304 2601725633 430
179 iso_pu_bacteria 2600255305 2601730175 430
180 iso_pu_bacteria 2600255306 2601735192 430
181 iso_pu_bacteria 2600255307 2601739877 430
182 iso_pu_bacteria 2600255309 2601750366 430
183 iso_pu_bacteria 2600255392 2602017619 430
184 iso_pu_bacteria 2602042052 2603659930 430
185 iso_pu_bacteria 2602042053 2603665206 430
186 iso_pu_bacteria 2602042103 2603837559 430
187 iso_pu_bacteria 2602042104 2603842635 430
188 iso_pu_bacteria 2602042105 2603847708 430
189 iso_pu_bacteria 2602042106 2603852779 430
190 iso_pu_bacteria 2602042110 2603870832 430
191 iso_pu_bacteria 2602042111 2603875769 430
192 iso_pu_bacteria 2603880178 2606048024 430
193 iso_pu_bacteria 2603880184 2606069636 430
194 iso_pu_bacteria 2603880202 2606145470 430
195 iso_pu_bacteria 2603880211 2606175427 430
196 iso_pu_bacteria 2636415599 2637225350 430
197 iso_pu_bacteria 2667528172 2671105166 430
198 iso_pu_bacteria 2675903046 2676406592 430
199 iso_pu_bacteria 2681812869 2682009172 430
200 iso_pu_bacteria 2775507074 2777022676 430
201 iso_pu_bacteria 2844528606 2844530938 430
202 iso_pu_bacteria 2865014394 2865015311 430
203 iso_pu_bacteria 2881609920 2881612616 430
204 iso_pu_bacteria 2904513164 2904513792 430
205 iso_pu_bacteria 2939617950 2939621578 430
206 iso_pu_bacteria 2945951305 2945952938 430
207 iso_pu_bacteria 2969079654 2969082342 430
208 iso_pu_bacteria 2974310843 2974315670 430
209 iso_pu_bacteria 2978975091 2978979503 430
210 iso_pu_bacteria 2984559226 2984564757 430
211 iso_pu_bacteria 2984595703 2984597485 430
212 iso_pu_bacteria 8019504834 8019508280 430
213 iso_pu_bacteria 2511231035 2511434811 431
214 3300009036 Ga0105244_10000026 Ga0105244_10000026135 433
215 3300025728 Ga0207655_1000057 Ga0207655_1000057165 433
216 3300041507 Ga0451851_0909960 Ga0451851_0909960_137_1438 433
217 3300048922 Ga0496119_0000402 Ga0496119_0000402_41837_43138 433
218 3300048923 Ga0496120_0000004 Ga0496120_0000004_491517_492818 433
219 2162886007 SwRhRL2b_contig_1567849 SwRhRL2b_0526.00006550 434
220 3300003856 Ga0058692_1000055 Ga0058692_100005527 434
221 3300003856 Ga0058692_1016395 Ga0058692_10163952 434
222 3300005289 Ga0065704_10070156 Ga0065704_1007015675 434
223 3300005347 Ga0070668_100079655 Ga0070668_1000796552 434
224 3300005548 Ga0070665_100000165 Ga0070665_10000016574 434
225 3300006946 Ga0079104_1000106 Ga0079104_100010615 434
226 3300006946 Ga0079104_1000160 Ga0079104_100016068 434
227 3300006946 Ga0079104_1003730 Ga0079104_10037304 434
228 3300009011 Ga0105251_10000145 Ga0105251_1000014521 434
229 3300009011 Ga0105251_10001514 Ga0105251_1000151412 434
230 3300009011 Ga0105251_10045908 Ga0105251_100459083 434
231 3300009036 Ga0105244_10000118 Ga0105244_1000011852 434
232 3300009036 Ga0105244_10000774 Ga0105244_1000077423 434
233 3300009092 Ga0105250_10000009 Ga0105250_10000009172 434
234 3300011119 Ga0105246_10038588 Ga0105246_100385883 434
235 3300011119 Ga0105246_10057749 Ga0105246_100577493 434
236 3300013100 Ga0157373_10000247 Ga0157373_1000024727 434
237 3300013104 Ga0157370_10000111 Ga0157370_1000011141 434
238 3300013307 Ga0157372_10004043 Ga0157372_100040433 434
239 3300013307 Ga0157372_10074523 Ga0157372_100745233 434
240 3300015261 Ga0182006_1012070 Ga0182006_10120703 434
241 3300015262 Ga0182007_10047911 Ga0182007_100479111 434
242 3300025711 Ga0207696_1000005 Ga0207696_1000005292 434
243 3300025711 Ga0207696_1001912 Ga0207696_10019128 434
244 3300025728 Ga0207655_1000427 Ga0207655_100042732 434
245 3300025728 Ga0207655_1002808 Ga0207655_10028084 434
246 3300025728 Ga0207655_1032834 Ga0207655_10328342 434
247 3300025735 Ga0207713_1000002 Ga0207713_1000002543 434
248 3300025735 Ga0207713_1002050 Ga0207713_100205013 434
249 3300025972 Ga0207668_10085951 Ga0207668_100859513 434
250 3300027111 Ga0209281_1000024 Ga0209281_1000024253 434
251 3300027111 Ga0209281_1000038 Ga0209281_100003826 434
252 3300027111 Ga0209281_1000161 Ga0209281_1000161114 434
253 3300027312 Ga0209371_1000075 Ga0209371_1000075113 434
254 3300027312 Ga0209371_1002598 Ga0209371_10025983 434
255 3300027312 Ga0209371_1002994 Ga0209371_10029946 434
256 3300028379 Ga0268266_10000154 Ga0268266_1000015461 434
257 3300030500 Ga0268256_1000068 Ga0268256_100006884 434
258 3300030500 Ga0268256_1002309 Ga0268256_10023099 434
259 3300041411 Ga0439466_0000009 Ga0439466_0000009_112457_113770 434
260 3300042146 Ga0450907_000919 Ga0450907_000919_3837_5150 434
261 3300046458 Ga0495591_000012 Ga0495591_000012_135148_136458 434
262 3300046471 Ga0495650_0005457 Ga0495650_0005457_6492_7811 434
263 3300046524 Ga0495648_0002293 Ga0495648_0002293_15134_16447 434
264 3300046530 Ga0495654_0000021 Ga0495654_0000021_140012_141322 434
265 3300046810 Ga0495660_0027726 Ga0495660_0027726_328_1641 434
266 3300047320 Ga0495672_0000053 Ga0495672_0000053_97259_98572 434
267 3300047446 Ga0495679_003002 Ga0495679_003002_1317_2630 434
268 3300047446 Ga0495679_004861 Ga0495679_004861_1910_3229 434
269 3300048908 Ga0496105_0004613 Ga0496105_0004613_5612_6919 434
270 3300048919 Ga0496116_0015778 Ga0496116_0015778_3167_4471 434
271 3300048920 Ga0496117_0000172 Ga0496117_0000172_99022_100326 434
272 3300048920 Ga0496117_0000268 Ga0496117_0000268_58125_59438 434
273 3300048920 Ga0496117_0013027 Ga0496117_0013027_113_1432 434
274 3300048921 Ga0496118_0000774 Ga0496118_0000774_45731_47044 434
275 3300048921 Ga0496118_0001097 Ga0496118_0001097_32904_34208 434
276 3300048921 Ga0496118_0003126 Ga0496118_0003126_8225_9544 434
277 3300048922 Ga0496119_0000162 Ga0496119_0000162_6493_7806 434
278 3300048922 Ga0496119_0000307 Ga0496119_0000307_47576_48880 434
279 3300048922 Ga0496119_0000348 Ga0496119_0000348_11573_12892 434
280 3300048923 Ga0496120_0000107 Ga0496120_0000107_82765_84072 434
281 3300048923 Ga0496120_0000323 Ga0496120_0000323_30532_31836 434
282 3300048923 Ga0496120_0000452 Ga0496120_0000452_52048_53367 434
283 3300048924 Ga0496121_0000273 Ga0496121_0000273_74329_75633 434
284 3300048924 Ga0496121_0002972 Ga0496121_0002972_2753_4066 434
285 3300048925 Ga0496122_0000069 Ga0496122_0000069_62435_63739 434
286 3300048926 Ga0496123_0000071 Ga0496123_0000071_160057_161361 434
287 3300048926 Ga0496123_0024157 Ga0496123_0024157_3101_4420 434
288 3300048926 Ga0496123_0043287 Ga0496123_0043287_551_1864 434
289 3300048927 Ga0496124_0000216 Ga0496124_0000216_31194_32519 434
290 3300048927 Ga0496124_0020320 Ga0496124_0020320_4789_6093 434
291 3300048927 Ga0496124_0031424 Ga0496124_0031424_2156_3469 434
292 3300048928 Ga0496125_0027629 Ga0496125_0027629_548_1861 434
293 3300048929 Ga0496126_0019862 Ga0496126_0019862_166_1479 434
294 3300048929 Ga0496126_0020091 Ga0496126_0020091_5060_6364 434
295 3300048929 Ga0496126_0066902 Ga0496126_0066902_850_2160 434

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF13657

Couple_hipA

HipA N-terminal domain

10

110

0.99

PF07804

HipA_C

HipA-like C-terminal domain

154

402

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
4yg7-assembly1.cif.gz_K structure of fl autorepression promoter complex 0.9709 2 433
2wiu-assembly1.cif.gz_A mercury-modified bacterial persistence regulator hipba 0.967 2 433
3hzi-assembly1.cif.gz_A-2 structure of mdt protein 0.9664 2 433
4yg7-assembly1.cif.gz_D structure of fl autorepression promoter complex 0.9664 2 433
3dnt-assembly1.cif.gz_A structures of mdt proteins 0.9648 2 433
ID Description Score Start End Superfamily
3akjB01 Alpha Beta;2-Layer Sandwich;Phosphorylase Kinase; domain 1; 0.8218 155 236 3.30.200.120
3aklB01 Alpha Beta;2-Layer Sandwich;Phosphorylase Kinase; domain 1; 0.7324 147 236 3.30.200.120
2wmoA03 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;DOCK DHR2 domain, lobe C 0.7196 386 433 1.20.58.740
af_Q9VX80_16_124_2.60.200.20 Mainly Beta;Sandwich;Tumour Suppressor Smad4; 0.6638 12 54 2.60.200.20
af_B0R034_1918_2038_1.20.58.740 Mainly Alpha;Up-down Bundle;Methane Monooxygenase Hydroxylase; Chain G, domain 1;DOCK DHR2 domain, lobe C 0.6617 379 433 1.20.58.740
ID Description Score Start End GO Terms
AF-A0A2E2IBC5-F1-model_v4 deleted 0.9901 248 338
AF-A0A3P8JVH6-F1-model_v4 Serine/threonine-protein kinase HipA (EC 2.7.11.1) 0.9877 163 338 GO:0004676
GO:0004677
GO:0004679
GO:0004711
GO:0005829
GO:0035175
GO:0035402
GO:0035403
GO:0035979
GO:0044022
GO:0044023
GO:0044024
GO:0044025
GO:0072354
GO:0072371
GO:0072518
GO:0140823
GO:0140855
GO:0140857
GO:1990244
AF-A0A6D0F3Q7-F1-model_v4 deleted 0.9874 162 433
AF-A0A810TMA9-F1-model_v4 deleted 0.9848 1 97
AF-A0A847M296-F1-model_v4 Type II toxin-antitoxin system HipA family toxin 0.9834 210 322 GO:0004674
GO:0005829

Feature Viewer

pLDDT pTM Quality
87.3 0.9 High
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Predicted Structure (AlphaFold2)

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