F392340

General Info

Members Datasets Scaffolds Average Seq Length
294 191 588 206

Family's Representative Sequence

Representative Sequence 3300049592|Ga0501076_0553393|Ga0501076_0553393_21_707
Length 228
Sequence MSHVVAPRPRTVSDEEILIAAHRTIARLGPARVTLADVANEARLAPATLVQRFGSKRGLLLALVELGVNGVDACFADMRAAHQSPLAALVAAATEMTRQVKSPQELANGLAFLQLDVSDPDFHRLAVKNSRRLHAGYKALLDEAVAAGELAPCDTAHLARTVGAVSGGSLIAWAIMREGPAEHWVREDLMMLLAPYRPRADAPAVASPRATAKRPRRQAARRATERRD

Samples

Sample ID Description Type Environment
1 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
2 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
11 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
14 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
15 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
16 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
19 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
20 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
21 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
22 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
23 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
24 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
25 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
26 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
27 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
28 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
29 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
30 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
31 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
32 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
33 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
34 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
35 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
36 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
39 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
40 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
41 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
42 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
43 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
44 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
45 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
46 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
47 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
48 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
49 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
50 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
51 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
52 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
53 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
54 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
55 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
56 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
57 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
58 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
61 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
63 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
65 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
66 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
67 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
68 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
69 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
70 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
71 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
72 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
73 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
74 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
75 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
76 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
77 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
78 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
110 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
114 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
115 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
116 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
117 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
118 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
119 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
120 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
121 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
122 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
123 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
124 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
125 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
126 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
127 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
128 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
129 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
130 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
131 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
132 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
133 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
134 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
135 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
136 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
137 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
138 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
139 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
140 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
141 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
142 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
143 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
144 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
145 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
146 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
147 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
148 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
149 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
150 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
151 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
152 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
153 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
154 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
155 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
156 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
157 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
158 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
160 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
165 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
166 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
167 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
168 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
169 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
170 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
171 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
172 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
173 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
174 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
175 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
176 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
177 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
178 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
179 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
180 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
181 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
182 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
183 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
184 3300059423 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 8_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
185 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
186 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
187 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
188 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
189 3002998708 Actinomadura barringtoniae GKU 128 Isolate Unclassified
190 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
191 8025478263 Streptomyces telluris AA8 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.98
Metatranscriptomes 0
Isolates 1.02

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 2.38
Rhizosphere 97.28
Stem 0
Stem Tuber 0
Unclassified 21.77

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0501076_0553393 3300049592 Bacteria 949
2 Ga0065712_10000829 3300005290 Bacteria 8014
3 Ga0065707_10231720 3300005295 Unclassified 1186
4 Ga0070676_10004586 3300005328 Bacteria 7283
5 Ga0070683_100026020 3300005329 Bacteria 5263
6 Ga0070690_100037390 3300005330 Bacteria 3059
7 Ga0070690_100047778 3300005330 Unclassified 2723
8 Ga0070690_100066604 3300005330 Bacteria 2332
9 Ga0070690_100671540 3300005330 Unclassified 793
10 Ga0068869_100035145 3300005334 Bacteria 3550
11 Ga0070666_10030058 3300005335 Bacteria 3576
12 Ga0070666_10173189 3300005335 Bacteria 1512
13 Ga0070660_100350030 3300005339 Unclassified 1216
14 Ga0070689_100086772 3300005340 Bacteria 2461
15 Ga0070687_100010208 3300005343 Bacteria 4051
16 Ga0070687_100216929 3300005343 Bacteria 1169
17 Ga0070692_10014961 3300005345 Bacteria 3658
18 Ga0070668_100002746 3300005347 Bacteria 12954
19 Ga0070669_100002709 3300005353 Bacteria 12781
20 Ga0070669_100008735 3300005353 Bacteria 7227
21 Ga0070675_100005900 3300005354 Bacteria 9381
22 Ga0070675_100163575 3300005354 Unclassified 1915
23 Ga0070675_100570363 3300005354 Bacteria 1025
24 Ga0070671_100498384 3300005355 Bacteria 1047
25 Ga0070673_100015429 3300005364 Bacteria 5365
26 Ga0070673_100587290 3300005364 Bacteria 1015
27 Ga0070688_100047885 3300005365 Bacteria 2654
28 Ga0070688_100078243 3300005365 Unclassified 2133
29 Ga0070659_100028438 3300005366 Bacteria 4317
30 Ga0070701_10062891 3300005438 Bacteria 1962
31 Ga0070701_10458110 3300005438 Bacteria 820
32 Ga0070711_100088520 3300005439 Bacteria 2225
33 Ga0070700_100031211 3300005441 Unclassified 3190
34 Ga0070700_100147293 3300005441 Bacteria 1606
35 Ga0070694_100001553 3300005444 Bacteria 13498
36 Ga0070694_100085977 3300005444 Unclassified 2197
37 Ga0070694_100249382 3300005444 Bacteria 1342
38 Ga0070708_100142108 3300005445 Bacteria 2226
39 Ga0070663_100035747 3300005455 Unclassified 3448
40 Ga0070662_100121091 3300005457 Bacteria 2006
41 Ga0070662_100166279 3300005457 Unclassified 1729
42 Ga0068867_100040258 3300005459 Bacteria 3409
43 Ga0068867_100384178 3300005459 Unclassified 1180
44 Ga0070707_100141339 3300005468 Bacteria 2343
45 Ga0070699_100006094 3300005518 Bacteria 10553
46 Ga0070679_100863640 3300005530 Bacteria 848
47 Ga0070684_100041288 3300005535 Unclassified 3976
48 Ga0070684_100413228 3300005535 Bacteria 1245
49 Ga0070697_100454682 3300005536 Unclassified 1116
50 Ga0068853_100472949 3300005539 Unclassified 1181
51 Ga0070686_100004338 3300005544 Bacteria 7813
52 Ga0070686_100088106 3300005544 Bacteria 2071
53 Ga0070695_100383419 3300005545 Bacteria 1061
54 Ga0070695_100509840 3300005545 Bacteria 932
55 Ga0070696_100167084 3300005546 Bacteria 1624
56 Ga0070665_100179092 3300005548 Bacteria 2121
57 Ga0070665_100441079 3300005548 Unclassified 1311
58 Ga0070704_100561648 3300005549 Unclassified 998
59 Ga0068857_100015696 3300005577 Bacteria 6624
60 Ga0068854_100021977 3300005578 Bacteria 4337
61 Ga0068859_100012705 3300005617 Bacteria 8464
62 Ga0068859_100295919 3300005617 Bacteria 1712
63 Ga0068859_101303565 3300005617 Bacteria 800
64 Ga0068861_100000547 3300005719 Bacteria 22140
65 Ga0068861_100007775 3300005719 Bacteria 7365
66 Ga0068851_10154202 3300005834 Unclassified 1258
67 Ga0068870_10009165 3300005840 Bacteria 4488
68 Ga0068863_100043490 3300005841 Bacteria 4263
69 Ga0068863_100534832 3300005841 Unclassified 1156
70 Ga0068858_100707472 3300005842 Unclassified 980
71 Ga0068858_100735391 3300005842 Unclassified 961
72 Ga0068862_100001058 3300005844 Bacteria 26381
73 Ga0068862_100082489 3300005844 Bacteria 2790
74 Ga0068862_100663706 3300005844 Bacteria 1007
75 Ga0081538_10000813 3300005981 Bacteria 33853
76 Ga0081538_10246073 3300005981 Bacteria 685
77 Ga0070717_10066699 3300006028 Bacteria 2993
78 Ga0070717_10218018 3300006028 Bacteria 1676
79 Ga0070716_100037056 3300006173 Bacteria 2693
80 Ga0075428_100099023 3300006844 Bacteria 3179
81 Ga0075430_100026538 3300006846 Bacteria 4926
82 Ga0075430_100051494 3300006846 Bacteria 3470
83 Ga0075430_100168536 3300006846 Unclassified 1822
84 Ga0075430_100303506 3300006846 Bacteria 1320
85 Ga0075431_100059694 3300006847 Bacteria 3935
86 Ga0075431_100181298 3300006847 Bacteria 2161
87 Ga0075431_100291291 3300006847 Bacteria 1651
88 Ga0075431_100325645 3300006847 Unclassified 1549
89 Ga0075433_10139345 3300006852 Bacteria 2156
90 Ga0075434_100206704 3300006871 Bacteria 1984
91 Ga0075434_100960174 3300006871 Bacteria 869
92 Ga0075429_100011947 3300006880 Bacteria 7528
93 Ga0075429_100350965 3300006880 Unclassified 1291
94 Ga0068865_100024236 3300006881 Unclassified 3978
95 Ga0075436_100041737 3300006914 Bacteria 3165
96 Ga0075436_100128864 3300006914 Unclassified 1774
97 Ga0075436_100238303 3300006914 Unclassified 1293
98 Ga0097620_100012707 3300006931 Bacteria 8464
99 Ga0097620_100295916 3300006931 Bacteria 1712
100 Ga0097620_101303186 3300006931 Bacteria 800
101 Ga0075435_100167363 3300007076 Bacteria 1854
102 Ga0075435_100207781 3300007076 Unclassified 1660
103 Ga0075435_100214247 3300007076 Unclassified 1634
104 Ga0111539_10037183 3300009094 Bacteria 5881
105 Ga0111539_10117128 3300009094 Bacteria 3123
106 Ga0105245_10113476 3300009098 Bacteria 2523
107 Ga0105245_10743463 3300009098 Bacteria 1016
108 Ga0114129_10034610 3300009147 Bacteria 7135
109 Ga0114129_10094460 3300009147 Bacteria 4141
110 Ga0114129_10220622 3300009147 Bacteria 2558
111 Ga0114129_10272029 3300009147 Unclassified 2266
112 Ga0114129_10484555 3300009147 Bacteria 1618
113 Ga0114129_10866983 3300009147 Bacteria 1147
114 Ga0114129_11066871 3300009147 Bacteria 1013
115 Ga0105241_10109589 3300009174 Bacteria 2208
116 Ga0105241_11193998 3300009174 Unclassified 720
117 Ga0105242_10127875 3300009176 Bacteria 2189
118 Ga0105242_10144630 3300009176 Unclassified 2067
119 Ga0105248_10020639 3300009177 Bacteria 7301
120 Ga0105248_10514002 3300009177 Bacteria 1350
121 Ga0105248_10752407 3300009177 Bacteria 1100
122 Ga0105237_10374015 3300009545 Unclassified 1429
123 Ga0105249_10001249 3300009553 Bacteria 22324
124 Ga0105249_10002937 3300009553 Bacteria 14709
125 Ga0105249_10416054 3300009553 Unclassified 1377
126 Ga0157371_10023374 3300013102 Bacteria 4520
127 Ga0157371_10047655 3300013102 Bacteria 3047
128 Ga0157374_10549283 3300013296 Unclassified 1163
129 Ga0163162_10006051 3300013306 Bacteria 11712
130 Ga0163162_10113908 3300013306 Bacteria 2803
131 Ga0157375_11363797 3300013308 Bacteria 835
132 Ga0163163_10840845 3300014325 Bacteria 981
133 Ga0157380_10004084 3300014326 Bacteria 10080
134 Ga0157380_10044612 3300014326 Bacteria 3476
135 Ga0157380_10060105 3300014326 Unclassified 3035
136 Ga0157380_10457440 3300014326 Bacteria 1228
137 Ga0157377_10013373 3300014745 Bacteria 4152
138 Ga0157377_10025579 3300014745 Unclassified 3149
139 Ga0157379_10003676 3300014968 Bacteria 13039
140 Ga0163161_10047350 3300017792 Bacteria 3105
141 Ga0207697_10004108 3300025315 Bacteria 7029
142 Ga0207680_10014930 3300025903 Bacteria 4038
143 Ga0207680_10238687 3300025903 Bacteria 1252
144 Ga0207685_10021502 3300025905 Unclassified 2163
145 Ga0207645_10000220 3300025907 Bacteria 47303
146 Ga0207643_10003312 3300025908 Bacteria 8695
147 Ga0207643_10013925 3300025908 Bacteria 4364
148 Ga0207693_10143005 3300025915 Unclassified 1881
149 Ga0207663_10244811 3300025916 Bacteria 1317
150 Ga0207662_10001626 3300025918 Bacteria 10987
151 Ga0207662_10237162 3300025918 Bacteria 1193
152 Ga0207657_10724720 3300025919 Bacteria 771
153 Ga0207646_10117838 3300025922 Bacteria 2385
154 Ga0207681_10019478 3300025923 Bacteria 4287
155 Ga0207659_10017261 3300025926 Bacteria 4712
156 Ga0207687_11096116 3300025927 Bacteria 684
157 Ga0207644_10350201 3300025931 Bacteria 1199
158 Ga0207690_10085299 3300025932 Unclassified 2216
159 Ga0207706_10000402 3300025933 Bacteria 46603
160 Ga0207706_10118880 3300025933 Bacteria 2324
161 Ga0207670_10143498 3300025936 Bacteria 1763
162 Ga0207665_10024802 3300025939 Bacteria 3955
163 Ga0207689_10006513 3300025942 Bacteria 10311
164 Ga0207679_10966625 3300025945 Bacteria 780
165 Ga0207667_10216235 3300025949 Bacteria 1964
166 Ga0207651_10006535 3300025960 Bacteria 6117
167 Ga0207651_10626718 3300025960 Bacteria 942
168 Ga0207712_10000836 3300025961 Bacteria 22606
169 Ga0207703_10028971 3300026035 Bacteria 4369
170 Ga0207678_10016323 3300026067 Bacteria 6519
171 Ga0207678_10134483 3300026067 Bacteria 2110
172 Ga0207708_10103497 3300026075 Bacteria 2205
173 Ga0207641_11140938 3300026088 Bacteria 778
174 Ga0207648_10056978 3300026089 Bacteria 3410
175 Ga0207676_10493877 3300026095 Bacteria 1161
176 Ga0207674_10003101 3300026116 Bacteria 20519
177 Ga0207674_10025054 3300026116 Bacteria 6366
178 Ga0207674_10800053 3300026116 Bacteria 910
179 Ga0207675_100003121 3300026118 Bacteria 16253
180 Ga0207675_100004126 3300026118 Bacteria 14064
181 Ga0207675_100154780 3300026118 Bacteria 2184
182 Ga0207428_10054410 3300027907 Unclassified 3188
183 Ga0268266_10120904 3300028379 Bacteria 2331
184 Ga0268265_10003843 3300028380 Bacteria 10625
185 Ga0268265_11089675 3300028380 Unclassified 792
186 Ga0268264_10043398 3300028381 Unclassified 3726
187 Ga0307408_100008866 3300031548 Bacteria 6644
188 Ga0307413_10064195 3300031824 Bacteria 2280
189 Ga0307410_10003354 3300031852 Bacteria 8023
190 Ga0307406_10027443 3300031901 Bacteria 3431
191 Ga0307407_10005749 3300031903 Bacteria 5421
192 Ga0307412_10024301 3300031911 Bacteria 3740
193 Ga0307409_100009349 3300031995 Bacteria 6017
194 Ga0307409_100198408 3300031995 Unclassified 1793
195 Ga0307409_101582726 3300031995 Bacteria 683
196 Ga0307416_100001134 3300032002 Bacteria 14305
197 Ga0307416_100069923 3300032002 Unclassified 2908
198 Ga0307416_100751092 3300032002 Bacteria 1068
199 Ga0307414_10234963 3300032004 Unclassified 1514
200 Ga0307411_10000483 3300032005 Bacteria 13881
201 Ga0307415_100001635 3300032126 Bacteria 10842
202 Ga0307415_101046153 3300032126 Bacteria 761
203 Ga0373923_0088312 3300035111 Bacteria 1353
204 Ga0373936_0060650 3300035113 Bacteria 1543
205 Ga0373956_0179545 3300035119 Bacteria 1000
206 Ga0373943_0005439 3300035170 Bacteria 5730
207 Ga0373946_0018625 3300035171 Bacteria 2668
208 Ga0373931_0195483 3300035691 Bacteria 1206
209 Ga0373931_0455210 3300035691 Bacteria 819
210 Ga0373935_0033819 3300035692 Bacteria 3184
211 Ga0373927_0316718 3300035695 Bacteria 1027
212 Ga0373947_0032072 3300035725 Bacteria 3095
213 Ga0373925_0033230 3300037068 Bacteria 3802
214 Ga0395901_1481655 3300038443 Bacteria 635
215 Ga0451789_0505059 3300041443 Bacteria 1061
216 Ga0439451_029145 3300042009 Bacteria 1112
217 Ga0439455_0030803 3300042012 Unclassified 1333
218 Ga0450923_001964 3300042125 Bacteria 2853
219 Ga0450896_005154 3300042133 Bacteria 1781
220 Ga0450906_035179 3300042145 Unclassified 884
221 Ga0450918_005139 3300042531 Bacteria 2357
222 Ga0451576_0149459 3300045051 Bacteria 2436
223 Ga0495629_0138756 3300046459 Bacteria 1692
224 Ga0495641_0261830 3300046461 Unclassified 778
225 Ga0495582_0382487 3300046473 Unclassified 811
226 Ga0495643_0001409 3300046522 Bacteria 22295
227 Ga0495598_0141821 3300046537 Bacteria 832
228 Ga0495621_0012641 3300046539 Unclassified 2635
229 Ga0495656_0015919 3300046615 Plasmid 2847
230 Ga0495613_0384602 3300046689 Unclassified 959
231 Ga0495624_0241882 3300046690 Bacteria 1092
232 Ga0495636_0297940 3300047318 Bacteria 754
233 Ga0496104_0577407 3300048907 Bacteria 1035
234 Ga0496106_0243182 3300048909 Unclassified 1438
235 Ga0496106_0315653 3300048909 Bacteria 1254
236 Ga0496111_0278691 3300048914 Bacteria 1240
237 Ga0496112_0953469 3300048915 Bacteria 779
238 Ga0496113_0080980 3300048916 Bacteria 2488
239 Ga0501031_0261753 3300049568 Bacteria 1124
240 Ga0501038_0736114 3300049574 Unclassified 736
241 Ga0501040_0108678 3300049576 Bacteria 1939
242 Ga0501040_0293867 3300049576 Bacteria 1161
243 Ga0501041_0147212 3300049577 Unclassified 1470
244 Ga0501042_0252431 3300049578 Bacteria 1273
245 Ga0501048_0057164 3300049582 Bacteria 2767
246 Ga0501048_0404194 3300049582 Bacteria 976
247 Ga0501068_0323310 3300049584 Bacteria 989
248 Ga0501071_0020759 3300049587 Bacteria 4567
249 Ga0501072_0030572 3300049588 Bacteria 4213
250 Ga0501075_0160083 3300049591 Unclassified 1717
251 Ga0501075_0195215 3300049591 Bacteria 1544
252 Ga0501076_0102891 3300049592 Bacteria 2303
253 Ga0501225_0053634 3300049705 Unclassified 1126
254 Ga0501079_0492873 3300049741 Bacteria 963
255 Ga0501080_0288970 3300049742 Bacteria 1489
256 Ga0501081_0159998 3300049743 Unclassified 1622
257 Ga0501045_0711167 3300049824 Bacteria 741
258 nmdc:mga05p37_15891_c1 3300050507 Bacteria 9054
259 nmdc:mga05p37_241473_c1 3300050507 Bacteria 2172
260 nmdc:mga05p37_568200_c1 3300050507 Unclassified 1287
261 nmdc:mga05p37_721520_c1 3300050507 Bacteria 1104
262 nmdc:mga09592_13290_c1 3300050508 Bacteria 6723
263 nmdc:mga09592_307498_c1 3300050508 Unclassified 1374
264 nmdc:mga09592_42643_c1 3300050508 Bacteria 3816
265 nmdc:mga0qj67_13386_c1 3300050509 Bacteria 6189
266 nmdc:mga0qj67_15700_c1 3300050509 Bacteria 5736
267 nmdc:mga0qj67_237690_c1 3300050509 Bacteria 1478
268 nmdc:mga0qj67_29885_c1 3300050509 Bacteria 4235
269 nmdc:mga0qj67_77829_c1 3300050509 Bacteria 2654
270 nmdc:mga06r32_152384_c1 3300050510 Bacteria 2291
271 nmdc:mga06r32_161327_c1 3300050510 Unclassified 2224
272 nmdc:mga06r32_204171_c1 3300050510 Bacteria 1964
273 nmdc:mga06r32_5259_c1 3300050510 Bacteria 11644
274 nmdc:mga08y16_15088_c1 3300050511 Bacteria 8124
275 nmdc:mga0n895_116731_c1 3300050512 Unclassified 2688
276 nmdc:mga0n895_198907_c1 3300050512 Bacteria 2035
277 nmdc:mga0rr50_169907_c1 3300050513 Unclassified 1776
278 nmdc:mga0rr50_185621_c1 3300050513 Bacteria 1702
279 nmdc:mga08x19_161328_c1 3300050514 Bacteria 1523
280 nmdc:mga08x19_324570_c1 3300050514 Unclassified 1072
281 nmdc:mga08x19_85668_c1 3300050514 Bacteria 2074
282 nmdc:mga0a205_59079_c1 3300050515 Bacteria 3704
283 nmdc:mga0a205_662794_c1 3300050515 Bacteria 894
284 nmdc:mga0a205_72637_c1 3300050515 Bacteria 3324
285 Ga0501084_0094663 3300054114 Bacteria 2508
286 Ga0590071_000017 3300059421 Bacteria 43985
287 Ga0590074_001224 3300059423 Bacteria 4064
288 Ga0590075_000326 3300059424 Bacteria 13233
289 Ga0590077_000494 3300059426 Bacteria 11023
290 Ga0501082_0231987 3300060353 Bacteria 1606
291 Ga0530510_0424798 3300061734 Unclassified 1003
292 3003004780 3002998708 Bacteria 11715108
293 3006491517 3006486233 Bacteria 8157040
294 8025483687 8025478263 Bacteria 8209203
295 Ga0501076_0553393
296 Ga0065712_10000829
297 Ga0065707_10231720
298 Ga0070676_10004586
299 Ga0070683_100026020
300 Ga0070690_100037390
301 Ga0070690_100047778
302 Ga0070690_100066604
303 Ga0070690_100671540
304 Ga0068869_100035145
305 Ga0070666_10030058
306 Ga0070666_10173189
307 Ga0070660_100350030
308 Ga0070689_100086772
309 Ga0070687_100010208
310 Ga0070687_100216929
311 Ga0070692_10014961
312 Ga0070668_100002746
313 Ga0070669_100002709
314 Ga0070669_100008735
315 Ga0070675_100005900
316 Ga0070675_100163575
317 Ga0070675_100570363
318 Ga0070671_100498384
319 Ga0070673_100015429
320 Ga0070673_100587290
321 Ga0070688_100047885
322 Ga0070688_100078243
323 Ga0070659_100028438
324 Ga0070701_10062891
325 Ga0070701_10458110
326 Ga0070711_100088520
327 Ga0070700_100031211
328 Ga0070700_100147293
329 Ga0070694_100001553
330 Ga0070694_100085977
331 Ga0070694_100249382
332 Ga0070708_100142108
333 Ga0070663_100035747
334 Ga0070662_100121091
335 Ga0070662_100166279
336 Ga0068867_100040258
337 Ga0068867_100384178
338 Ga0070707_100141339
339 Ga0070699_100006094
340 Ga0070679_100863640
341 Ga0070684_100041288
342 Ga0070684_100413228
343 Ga0070697_100454682
344 Ga0068853_100472949
345 Ga0070686_100004338
346 Ga0070686_100088106
347 Ga0070695_100383419
348 Ga0070695_100509840
349 Ga0070696_100167084
350 Ga0070665_100179092
351 Ga0070665_100441079
352 Ga0070704_100561648
353 Ga0068857_100015696
354 Ga0068854_100021977
355 Ga0068859_100012705
356 Ga0068859_100295919
357 Ga0068859_101303565
358 Ga0068861_100000547
359 Ga0068861_100007775
360 Ga0068851_10154202
361 Ga0068870_10009165
362 Ga0068863_100043490
363 Ga0068863_100534832
364 Ga0068858_100707472
365 Ga0068858_100735391
366 Ga0068862_100001058
367 Ga0068862_100082489
368 Ga0068862_100663706
369 Ga0081538_10000813
370 Ga0081538_10246073
371 Ga0070717_10066699
372 Ga0070717_10218018
373 Ga0070716_100037056
374 Ga0075428_100099023
375 Ga0075430_100026538
376 Ga0075430_100051494
377 Ga0075430_100168536
378 Ga0075430_100303506
379 Ga0075431_100059694
380 Ga0075431_100181298
381 Ga0075431_100291291
382 Ga0075431_100325645
383 Ga0075433_10139345
384 Ga0075434_100206704
385 Ga0075434_100960174
386 Ga0075429_100011947
387 Ga0075429_100350965
388 Ga0068865_100024236
389 Ga0075436_100041737
390 Ga0075436_100128864
391 Ga0075436_100238303
392 Ga0097620_100012707
393 Ga0097620_100295916
394 Ga0097620_101303186
395 Ga0075435_100167363
396 Ga0075435_100207781
397 Ga0075435_100214247
398 Ga0111539_10037183
399 Ga0111539_10117128
400 Ga0105245_10113476
401 Ga0105245_10743463
402 Ga0114129_10034610
403 Ga0114129_10094460
404 Ga0114129_10220622
405 Ga0114129_10272029
406 Ga0114129_10484555
407 Ga0114129_10866983
408 Ga0114129_11066871
409 Ga0105241_10109589
410 Ga0105241_11193998
411 Ga0105242_10127875
412 Ga0105242_10144630
413 Ga0105248_10020639
414 Ga0105248_10514002
415 Ga0105248_10752407
416 Ga0105237_10374015
417 Ga0105249_10001249
418 Ga0105249_10002937
419 Ga0105249_10416054
420 Ga0157371_10023374
421 Ga0157371_10047655
422 Ga0157374_10549283
423 Ga0163162_10006051
424 Ga0163162_10113908
425 Ga0157375_11363797
426 Ga0163163_10840845
427 Ga0157380_10004084
428 Ga0157380_10044612
429 Ga0157380_10060105
430 Ga0157380_10457440
431 Ga0157377_10013373
432 Ga0157377_10025579
433 Ga0157379_10003676
434 Ga0163161_10047350
435 Ga0207697_10004108
436 Ga0207680_10014930
437 Ga0207680_10238687
438 Ga0207685_10021502
439 Ga0207645_10000220
440 Ga0207643_10003312
441 Ga0207643_10013925
442 Ga0207693_10143005
443 Ga0207663_10244811
444 Ga0207662_10001626
445 Ga0207662_10237162
446 Ga0207657_10724720
447 Ga0207646_10117838
448 Ga0207681_10019478
449 Ga0207659_10017261
450 Ga0207687_11096116
451 Ga0207644_10350201
452 Ga0207690_10085299
453 Ga0207706_10000402
454 Ga0207706_10118880
455 Ga0207670_10143498
456 Ga0207665_10024802
457 Ga0207689_10006513
458 Ga0207679_10966625
459 Ga0207667_10216235
460 Ga0207651_10006535
461 Ga0207651_10626718
462 Ga0207712_10000836
463 Ga0207703_10028971
464 Ga0207678_10016323
465 Ga0207678_10134483
466 Ga0207708_10103497
467 Ga0207641_11140938
468 Ga0207648_10056978
469 Ga0207676_10493877
470 Ga0207674_10003101
471 Ga0207674_10025054
472 Ga0207674_10800053
473 Ga0207675_100003121
474 Ga0207675_100004126
475 Ga0207675_100154780
476 Ga0207428_10054410
477 Ga0268266_10120904
478 Ga0268265_10003843
479 Ga0268265_11089675
480 Ga0268264_10043398
481 Ga0307408_100008866
482 Ga0307413_10064195
483 Ga0307410_10003354
484 Ga0307406_10027443
485 Ga0307407_10005749
486 Ga0307412_10024301
487 Ga0307409_100009349
488 Ga0307409_100198408
489 Ga0307409_101582726
490 Ga0307416_100001134
491 Ga0307416_100069923
492 Ga0307416_100751092
493 Ga0307414_10234963
494 Ga0307411_10000483
495 Ga0307415_100001635
496 Ga0307415_101046153
497 Ga0373923_0088312
498 Ga0373936_0060650
499 Ga0373956_0179545
500 Ga0373943_0005439
501 Ga0373946_0018625
502 Ga0373931_0195483
503 Ga0373931_0455210
504 Ga0373935_0033819
505 Ga0373927_0316718
506 Ga0373947_0032072
507 Ga0373925_0033230
508 Ga0395901_1481655
509 Ga0451789_0505059
510 Ga0439451_029145
511 Ga0439455_0030803
512 Ga0450923_001964
513 Ga0450896_005154
514 Ga0450906_035179
515 Ga0450918_005139
516 Ga0451576_0149459
517 Ga0495629_0138756
518 Ga0495641_0261830
519 Ga0495582_0382487
520 Ga0495643_0001409
521 Ga0495598_0141821
522 Ga0495621_0012641
523 Ga0495656_0015919
524 Ga0495613_0384602
525 Ga0495624_0241882
526 Ga0495636_0297940
527 Ga0496104_0577407
528 Ga0496106_0243182
529 Ga0496106_0315653
530 Ga0496111_0278691
531 Ga0496112_0953469
532 Ga0496113_0080980
533 Ga0501031_0261753
534 Ga0501038_0736114
535 Ga0501040_0108678
536 Ga0501040_0293867
537 Ga0501041_0147212
538 Ga0501042_0252431
539 Ga0501048_0057164
540 Ga0501048_0404194
541 Ga0501068_0323310
542 Ga0501071_0020759
543 Ga0501072_0030572
544 Ga0501075_0160083
545 Ga0501075_0195215
546 Ga0501076_0102891
547 Ga0501225_0053634
548 Ga0501079_0492873
549 Ga0501080_0288970
550 Ga0501081_0159998
551 Ga0501045_0711167
552 nmdc:mga05p37_15891_c1
553 nmdc:mga05p37_241473_c1
554 nmdc:mga05p37_568200_c1
555 nmdc:mga05p37_721520_c1
556 nmdc:mga09592_13290_c1
557 nmdc:mga09592_307498_c1
558 nmdc:mga09592_42643_c1
559 nmdc:mga0qj67_13386_c1
560 nmdc:mga0qj67_15700_c1
561 nmdc:mga0qj67_237690_c1
562 nmdc:mga0qj67_29885_c1
563 nmdc:mga0qj67_77829_c1
564 nmdc:mga06r32_152384_c1
565 nmdc:mga06r32_161327_c1
566 nmdc:mga06r32_204171_c1
567 nmdc:mga06r32_5259_c1
568 nmdc:mga08y16_15088_c1
569 nmdc:mga0n895_116731_c1
570 nmdc:mga0n895_198907_c1
571 nmdc:mga0rr50_169907_c1
572 nmdc:mga0rr50_185621_c1
573 nmdc:mga08x19_161328_c1
574 nmdc:mga08x19_324570_c1
575 nmdc:mga08x19_85668_c1
576 nmdc:mga0a205_59079_c1
577 nmdc:mga0a205_662794_c1
578 nmdc:mga0a205_72637_c1
579 Ga0501084_0094663
580 Ga0590071_000017
581 Ga0590074_001224
582 Ga0590075_000326
583 Ga0590077_000494
584 Ga0501082_0231987
585 Ga0530510_0424798
586 3003004780
587 3006491517
588 8025483687

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00440

TetR_N

Bacterial regulatory proteins, tetR family

17

63

0.97

PF13977

TetR_C_6

BetI-type transcriptional repressor, C-terminal

83

195

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
3g56-assembly1.cif.gz_A structure of the macrolide biosensor protein, mphr(a) 0.8197 9 192
3frq-assembly1.cif.gz_B structure of the macrolide biosensor protein, mphr(a), with erythromcyin 0.8112 7 192
4l62-assembly1.cif.gz_C crystal structure of pseudomonas aeruginosa transcriptional regulator pa2196 bound to its operator dna 0.8071 10 188
6u18-assembly1.cif.gz_B directed evolution of a biosensor selective for the macrolide antibiotic clarithromycin 0.8041 8 192
3knw-assembly1.cif.gz_A crystal structure of a putative transcriptional regulator (tetr/acrr family member) from putative transcriptional regulator (tetr/acrr family) 0.8013 10 189
ID Description Score Start End Superfamily
3whcE01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9316 11 51 1.10.10.60
3whbA01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.93 11 51 1.10.10.60
1pb6B01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9207 11 58 1.10.10.60
3whcC01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9203 10 49 1.10.10.60
4xk4A01 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Homeodomain-like 0.9143 11 58 1.10.10.60
ID Description Score Start End GO Terms
AF-L7Y6Q0-F1-model_v4 Transcriptional regulator 0.9962 8 193 GO:0000976
GO:0003700
AF-A0A2U2YZI2-F1-model_v4 TetR/AcrR family transcriptional regulator 0.9811 7 196 GO:0003677
GO:0006355
AF-L7Y6Q0-F1-model_v4 Transcriptional regulator 0.9753 8 193 GO:0000976
GO:0003700
AF-A8M308-F1-model_v4 Transcriptional regulator, TetR family 0.9735 4 193 GO:0000976
GO:0003700
GO:0045892
AF-A0A7W9U7Q4-F1-model_v4 deleted 0.9725 13 196

Map