F391717

General Info

Members Datasets Scaffolds Average Seq Length
293 211 242 594

Family's Representative Sequence

Representative Sequence 3300048924|Ga0496121_0000100|Ga0496121_0000100_128793_130775
Length 660
Sequence LTPQSLRLFLSLEALRHDWNGRKPTPTNSTQPRNRATRRYCQTGSMRPEQTNTDTPTMTDPTRDNEILRYFEAEMRYLREAGKEFAQAFPDRASELDLDRIGERDPHVERLFEGFAFLMGRLRHKLDDELPELTEGLVSMLWPHYLRMIPSLAILELVPETGALQKHETLDAGLEATSDPVDTGAHSGDAAIECVYRTTQAVDLYPLSLTEAGVYAREDGRSVIRLRLAIHTQAERQRLQVPRLRLYLNADRPVALALYAALTAKPVAMQVRVPGWPEDRPGAPSPMPGLRLAPAGFAGEERLWPKADNAFGGYQLLLEYFTFPEKFMFVDLLGLDMQAIPASAEWLDVEVVLERPYPDDMRFNAANVRLYCTPVINLFTVGADPVRVTQHETEYRVRAQAQHGSAVDIYSVDAVEYFERGRRFEYVPFAAFRHRGGMLRHDMPERYYHTRMRRGPAGRFDTWIVLGGHAWEQANVLPAETLSLSVTATNGMLPRKALREAGITRMRGGFTNIGAVRNLTAPTLPVYPPTGDRFQWRVLSHLAPNYLSLLDAEILRGSLALYDWTDGELNRRRIDAITDVRHRSLQKLVKGGLMRGVEITVTLDAGRFAGEGDLELFGSMLNRFLGLYATLNLYTRLVIVTQPTGRRIEWPETKGEGAPF

Samples

Sample ID Description Type Environment
1 2501025501 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
2 2508501125 Burkholderia sp. WSM2232 Isolate Nodule
3 2510065045 Paraburkholderia sprentiae WSM5005 Isolate Nodule
4 2510917015 Paraburkholderia silvatlantica PVA5 Isolate Unclassified
5 2512047030 Paraburkholderia tuberum STM678 Isolate Nodule
6 2513237082 Paraburkholderia mimosarum STM3621 Isolate Nodule
7 2513237151 Burkholderia sp. WSM2230 Isolate Nodule
8 2515154122 Paraburkholderia atlantica JPY251 Isolate Nodule
9 2519103095 Burkholderia sp. KJ006 Isolate Nodule
10 2526164713 Paraburkholderia phenoliruptrix JPY366 Isolate Nodule
11 2547132103 Chromobacterium sp. C-61 Isolate Rhizosphere
12 2582581311 Burkholderia sp. WP42 Isolate Rhizosphere
13 2599185240 Burkholderia sp. NFPP32 Isolate Rhizoplane
14 2599185355 Burkholderia sp. NFACC33-1 Isolate Rhizoplane
15 2600255067 Paraburkholderia kururiensis thiooxydans NBRC 107107 Isolate Unclassified
16 2602042109 Klebsiella aerogenes NFIX39 Isolate Rhizoplane
17 2675903129 Burkholderia pyrrocinia NFIX32 Isolate Rhizoplane
18 2718217991 Paraburkholderia sprentiae WSM5005 Isolate Nodule
19 2744054900 Paraburkholderia ginsengiterrae DCY85-1 Isolate Unclassified
20 2744054901 Paraburkholderia ginsengiterrae DCY85 Isolate Unclassified
21 2816332253 Burkholderia vietnamiensis HI2297 Isolate Unclassified
22 2816332256 Burkholderia vietnamiensis MSMB608WGS Isolate Unclassified
23 2816332286 Burkholderia vietnamiensis HI2221 Isolate Rhizosphere
24 2842324504 Paraburkholderia fungorum SEMIA 4007 Isolate Nodule
25 2842348783 Paraburkholderia fungorum SEMIA 4013 Isolate Nodule
26 2842454564 Paraburkholderia fungorum SEMIA 4056 Isolate Nodule
27 2843690924 Chromobacterium rhizoryzae JP2-74 Isolate Rhizosphere
28 2863421361 Burkholderia cenocepacia CACua-24 Isolate Rhizosphere
29 2870068957 Burkholderia sp. JP2-270 Isolate Unclassified
30 2883087390 Paraburkholderia guartelaensis CNPSo 3008 Isolate Unclassified
31 2904564687 Burkholderia sp. 571 Isolate Unclassified
32 2904571731 Burkholderia cenocepacia 574 Isolate Unclassified
33 2928058823 Ralstonia sp. 1138 Isolate Unclassified
34 2928135762 Paraburkholderia terricola 1988 Isolate Unclassified
35 2928157003 Burkholderia ambifaria 566 Isolate Unclassified
36 2928163908 Burkholderia sp. 567 Isolate Unclassified
37 2928170801 Burkholderia sp. 572 Isolate Unclassified
38 2928536128 Burkholderia sola 565 Isolate Unclassified
39 2981990288 Burkholderia sp. PvR073 Isolate Rhizosphere
40 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
41 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
42 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
43 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
44 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
45 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
46 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
47 3300003187 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB Metagenome Endosphere
48 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
49 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
50 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
51 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
52 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
53 3300003775 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 Metagenome Endosphere
54 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
55 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
56 3300003841 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 Metagenome Endosphere
57 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
58 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
59 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
60 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
61 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
62 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
63 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
64 3300006946 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG Metagenome Nodule
65 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
66 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
67 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
68 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
69 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
70 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
71 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
72 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
73 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
74 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
75 3300015261 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG Metagenome Rhizosphere
76 3300015262 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-113_1 MetaG Metagenome Rhizosphere
77 3300016635 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A10 Metagenome Rhizosphere
78 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
79 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
80 3300025225 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
85 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
86 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
87 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
88 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
89 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
90 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
91 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
92 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
93 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
94 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
95 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027111 Root nodule microbial communities of legume samples collected from California, USA - Medicago truncatula BG (SPAdes) (version 2) Metagenome Nodule
101 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
102 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
103 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
104 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
105 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
106 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
107 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
108 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
109 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
110 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
111 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
112 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
113 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
114 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
115 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
116 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
117 3300042010 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z080117_5431 Metagenome Rhizosphere
118 3300042137 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0913F_E14_072516_1519 Metagenome Rhizosphere
119 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
120 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
121 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
122 3300044672 Roots microbial communities from millet plant in semiarid region near Thies, Senegal - COA3E Metagenome Unclassified
123 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
124 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
125 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
126 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
127 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
128 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
129 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
130 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
131 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
132 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
133 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
134 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
135 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
136 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
137 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
138 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
139 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
140 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
141 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
142 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
143 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
144 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
145 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
146 3300046474 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 rhizosphere Metagenome Rhizosphere
147 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
148 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
149 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
150 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
151 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
152 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
153 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
154 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
155 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
156 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
157 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
158 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
159 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
160 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
161 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
162 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
163 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
164 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
165 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
166 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
167 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
168 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
169 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
170 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
171 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
172 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
173 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
174 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
175 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
176 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
177 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
178 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
179 3300047447 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 rhizosphere Metagenome Rhizosphere
180 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
181 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
182 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
183 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
184 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
185 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
186 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
187 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
188 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
189 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
190 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
191 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
192 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
193 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
194 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
195 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
196 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
197 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
198 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
199 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
200 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
201 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
202 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
203 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
204 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
205 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
206 641736154 Burkholderia ambifaria IOP40-10 Isolate Rhizosphere
207 8018845410 Burkholderia reimsis BE51 Isolate Rhizosphere
208 8020807995 Burkholderia sp. B10 Isolate Rhizosphere
209 8020945358 Burkholderia sp. BE17 Isolate Rhizosphere
210 8040167225 Burkholderia vietnamiensis RS1 Isolate Unclassified
211 8040173305 Burkholderia vietnamiensis BE10 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 82.59
Metatranscriptomes 0
Isolates 17.41

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 10.92
Nodule 6.48
Rhizoplane 3.75
Rhizosphere 57.68
Stem 0
Stem Tuber 0
Unclassified 21.16

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10016318 3300001979 Bacteria 2685
2 JGI24739J22299_10000827 3300001989 Bacteria 11365
3 JGI24739J22299_10009268 3300001989 Bacteria 3674
4 JGI24735J21928_10001397 3300002067 Bacteria 8532
5 JGI24735J21928_10018156 3300002067 Bacteria 2170
6 JGI25155J39150_1000190 3300002704 Bacteria 26071
7 JGI25156J39149_1000154 3300002705 Bacteria 50528
8 JGI25156J39149_1000180 3300002705 Bacteria 46610
9 JGI25156J39149_1000796 3300002705 Bacteria 16161
10 JGI25154J39366_1000300 3300002738 Bacteria 29390
11 JGI25157J39369_1000169 3300002741 Bacteria 55047
12 JGI25157J39369_1000536 3300002741 Bacteria 22789
13 JGI25151J46595_10002017 3300003187 Bacteria 12706
14 rootH2_10018358 3300003320 Bacteria 12933
15 rootH2_10040484 3300003320 Bacteria 5056
16 rootL2_10086432 3300003322 Bacteria 10269
17 Ga0055533_1000898 3300003756 Bacteria 8953
18 Ga0055532_1000017 3300003758 Bacteria 306880
19 Ga0055532_1000312 3300003758 Bacteria 29468
20 Ga0055526_1003431 3300003771 Bacteria 10065
21 Ga0055526_1003849 3300003771 Bacteria 9309
22 Ga0055524_1000838 3300003775 Bacteria 20175
23 Ga0055536_1000380 3300003781 Bacteria 32625
24 Ga0055534_1000390 3300003784 Bacteria 27503
25 Ga0055534_1000927 3300003784 Bacteria 13207
26 Ga0055541_1000216 3300003841 Bacteria 24047
27 Ga0070658_10010531 3300005327 Bacteria 7411
28 Ga0070660_100000003 3300005339 Bacteria 176884
29 Ga0070659_100000024 3300005366 Bacteria 148685
30 Ga0068855_100002090 3300005563 Bacteria 24730
31 Ga0075432_10000025 3300006058 Bacteria 27249
32 Ga0075432_10002800 3300006058 Bacteria 5852
33 Ga0075428_100180637 3300006844 Bacteria 2284
34 Ga0075434_100043394 3300006871 Bacteria 4461
35 Ga0079104_1000083 3300006946 Bacteria 137254
36 Ga0099826_10000031 3300006948 Bacteria 124966
37 Ga0105251_10013144 3300009011 Bacteria 4643
38 Ga0105240_10048007 3300009093 Bacteria 5398
39 Ga0114129_10061356 3300009147 Bacteria 5254
40 Ga0105248_10136499 3300009177 Bacteria 2767
41 Ga0105238_10019940 3300009551 Bacteria 6825
42 Ga0105239_10049778 3300010375 Bacteria 4595
43 Ga0157369_10004616 3300013105 Bacteria 16191
44 Ga0163162_10024544 3300013306 Bacteria 5952
45 Ga0157375_10009383 3300013308 Bacteria 8591
46 Ga0182006_1032691 3300015261 Bacteria 2089
47 Ga0182007_10001998 3300015262 Bacteria 10515
48 Ga0183361_10002 3300016635 Bacteria 907642
49 Ga0163161_10000417 3300017792 Bacteria 35758
50 Ga0163161_10002931 3300017792 Bacteria 12088
51 Ga0209435_100015 3300025206 Bacteria 321177
52 Ga0209566_100487 3300025225 Bacteria 27855
53 Ga0209674_100112 3300025226 Bacteria 142700
54 Ga0209147_100004 3300025229 Bacteria 1371850
55 Ga0209147_100153 3300025229 Bacteria 97432
56 Ga0209258_100226 3300025242 Bacteria 106588
57 Ga0209646_1000040 3300025246 Bacteria 347867
58 Ga0209026_1000034 3300025250 Bacteria 306953
59 Ga0209148_1005295 3300025254 Bacteria 2989
60 Ga0209759_1000049 3300025256 Bacteria 221692
61 Ga0209759_1000125 3300025256 Bacteria 135516
62 Ga0209759_1002960 3300025256 Bacteria 7086
63 Ga0209565_1000523 3300025263 Bacteria 27280
64 Ga0209675_1000149 3300025291 Bacteria 93109
65 Ga0209675_1000552 3300025291 Bacteria 27279
66 Ga0209676_1000014 3300025292 Bacteria 793514
67 Ga0209025_1001123 3300025294 Bacteria 38329
68 Ga0209025_1001835 3300025294 Bacteria 24946
69 Ga0209025_1002094 3300025294 Bacteria 22555
70 Ga0209564_1001045 3300025295 Bacteria 33865
71 Ga0209564_1001284 3300025295 Bacteria 27513
72 Ga0209564_1001582 3300025295 Bacteria 22251
73 Ga0209564_1014433 3300025295 Bacteria 3287
74 Ga0209256_1001955 3300025299 Bacteria 18682
75 Ga0207426_1002283 3300025302 Bacteria 12647
76 Ga0207647_10003600 3300025904 Bacteria 11610
77 Ga0207657_10000002 3300025919 Bacteria 444378
78 Ga0207694_10008506 3300025924 Bacteria 7751
79 Ga0207690_10000014 3300025932 Bacteria 263016
80 Ga0207667_10000849 3300025949 Bacteria 39431
81 Ga0209281_1000130 3300027111 Bacteria 191756
82 Ga0209282_1000011 3300027666 Bacteria 217665
83 Ga0207428_10023102 3300027907 Bacteria 5234
84 Ga0265338_10000385 3300028800 Bacteria 79013
85 Ga0265338_10001292 3300028800 Bacteria 41039
86 Ga0265338_10012391 3300028800 Bacteria 9722
87 Ga0314311_1184308 3300030733 Bacteria 3706
88 Ga0265316_10076302 3300031344 Unclassified 2575
89 Ga0316575_10000642 3300031665 Bacteria 10309
90 Ga0307405_10004176 3300031731 Bacteria 6796
91 Ga0307406_10001352 3300031901 Bacteria 13746
92 Ga0307412_10000929 3300031911 Bacteria 16766
93 Ga0307411_10014140 3300032005 Bacteria 4431
94 Ga0395899_0000005 3300037312 Bacteria 772966
95 Ga0395899_0056673 3300037312 Bacteria 2896
96 Ga0395900_0000003 3300037418 Bacteria 587648
97 Ga0395898_0000003 3300037466 Bacteria 772986
98 Ga0395898_0005671 3300037466 Bacteria 13459
99 Ga0395901_0014859 3300038443 Bacteria 7909
100 Ga0436361_0428504 3300039447 Bacteria 15662
101 Ga0439438_008443 3300041405 Bacteria 3416
102 Ga0439452_000458 3300042010 Bacteria 22955
103 Ga0450902_001206 3300042137 Bacteria 3474
104 Ga0451577_0000020 3300042876 Bacteria 477488
105 Ga0466969_0006362 3300044656 Bacteria 6283
106 Ga0466969_0007809 3300044656 Bacteria 5688
107 Ga0466972_0016309 3300044658 Bacteria 3713
108 Ga0466982_0009050 3300044672 Bacteria 5068
109 Ga0453683_0018051 3300044673 Bacteria 4531
110 Ga0466965_0002604 3300044683 Bacteria 7717
111 Ga0466966_0000069 3300044684 Bacteria 67594
112 Ga0466966_0000490 3300044684 Bacteria 25414
113 Ga0466961_0001976 3300044693 Bacteria 12761
114 Ga0466961_0002219 3300044693 Bacteria 12091
115 Ga0466961_0033687 3300044693 Bacteria 3290
116 Ga0466961_0040686 3300044693 Bacteria 2979
117 Ga0466961_0052047 3300044693 Bacteria 2613
118 Ga0466963_0003615 3300044694 Bacteria 8885
119 Ga0453684_0000246 3300044712 Bacteria 233363
120 Ga0453684_0000396 3300044712 Bacteria 179548
121 Ga0453684_0000943 3300044712 Bacteria 95875
122 Ga0453684_0005141 3300044712 Bacteria 26321
123 Ga0466971_0005610 3300044719 Bacteria 5457
124 Ga0466971_0023275 3300044719 Bacteria 2760
125 Ga0466970_0029822 3300044765 Bacteria 2875
126 Ga0466957_0002080 3300044842 Bacteria 10709
127 Ga0466957_0004752 3300044842 Bacteria 7601
128 Ga0466960_0003230 3300044901 Bacteria 6253
129 Ga0466959_0022431 3300045049 Bacteria 4667
130 Ga0466959_0044926 3300045049 Bacteria 3254
131 Ga0451576_0000690 3300045051 Bacteria 68707
132 Ga0451576_0000854 3300045051 Bacteria 59031
133 Ga0466958_0072106 3300045836 Bacteria 2115
134 Ga0466967_0185746 3300045976 Bacteria 1963
135 Ga0495592_0000805 3300046454 Bacteria 21708
136 Ga0495603_0029245 3300046455 Bacteria 3323
137 Ga0495590_0007418 3300046457 Bacteria 4232
138 Ga0495591_005869 3300046458 Bacteria 5571
139 Ga0495591_006504 3300046458 Bacteria 5158
140 Ga0495629_0033535 3300046459 Bacteria 3631
141 Ga0495638_0003371 3300046460 Bacteria 12597
142 Ga0495638_0013814 3300046460 Bacteria 5482
143 Ga0495653_0000916 3300046463 Bacteria 22824
144 Ga0495650_0001147 3300046471 Bacteria 28579
145 Ga0495580_0006706 3300046472 Bacteria 9348
146 Ga0495605_0002076 3300046474 Bacteria 12634
147 Ga0495605_0003320 3300046474 Bacteria 9627
148 Ga0495605_0003441 3300046474 Bacteria 9410
149 Ga0495605_0003455 3300046474 Bacteria 9398
150 Ga0495584_0007635 3300046491 Bacteria 5638
151 Ga0495585_0027796 3300046492 Bacteria 3228
152 Ga0495596_0000260 3300046500 Bacteria 35336
153 Ga0495607_0054959 3300046501 Bacteria 2292
154 Ga0495583_0003051 3300046506 Bacteria 13311
155 Ga0495583_0013683 3300046506 Bacteria 4509
156 Ga0495606_0000032 3300046507 Bacteria 248690
157 Ga0495606_0003770 3300046507 Bacteria 15758
158 Ga0495606_0022950 3300046507 Bacteria 4533
159 Ga0495610_0000935 3300046512 Bacteria 27123
160 Ga0495616_0000971 3300046513 Bacteria 20547
161 Ga0495616_0019364 3300046513 Bacteria 3714
162 Ga0495618_0004012 3300046514 Bacteria 9077
163 Ga0495620_0001011 3300046515 Bacteria 17330
164 Ga0495628_0013775 3300046516 Bacteria 6795
165 Ga0495630_0034088 3300046517 Bacteria 3799
166 Ga0495632_0004191 3300046519 Bacteria 9863
167 Ga0495637_0001093 3300046520 Bacteria 16740
168 Ga0495643_0004266 3300046522 Bacteria 10083
169 Ga0495648_0004569 3300046524 Bacteria 11791
170 Ga0495609_0000413 3300046538 Bacteria 35804
171 Ga0495625_0022592 3300046660 Bacteria 4820
172 Ga0495661_0004626 3300046665 Bacteria 9900
173 Ga0495661_0046219 3300046665 Bacteria 2659
174 Ga0495588_0001451 3300046674 Bacteria 10162
175 Ga0495669_0003430 3300046684 Bacteria 6530
176 Ga0495670_0019096 3300046691 Bacteria 3378
177 Ga0495671_0000392 3300046692 Bacteria 36152
178 Ga0495671_0000507 3300046692 Bacteria 29891
179 Ga0495649_0001744 3300046694 Bacteria 16055
180 Ga0495649_0011715 3300046694 Bacteria 5132
181 Ga0495589_0002620 3300046794 Bacteria 9971
182 Ga0495589_0002675 3300046794 Bacteria 9853
183 Ga0495660_0006380 3300046810 Bacteria 6981
184 Ga0495674_0011949 3300047319 Bacteria 8188
185 Ga0495674_0022362 3300047319 Bacteria 5832
186 Ga0495672_0005302 3300047320 Bacteria 10263
187 Ga0495672_0005743 3300047320 Bacteria 9771
188 Ga0495672_0007181 3300047320 Bacteria 8419
189 Ga0495672_0008142 3300047320 Bacteria 7783
190 Ga0495672_0019333 3300047320 Bacteria 4495
191 Ga0495676_0000443 3300047321 Bacteria 33834
192 Ga0495680_0035049 3300047322 Bacteria 4046
193 Ga0495683_0000249 3300047323 Bacteria 48551
194 Ga0495683_0004891 3300047323 Bacteria 7505
195 Ga0495687_003113 3300047443 Bacteria 12400
196 Ga0495687_028279 3300047443 Bacteria 2610
197 Ga0495685_011918 3300047447 Bacteria 2941
198 Ga0495593_0007335 3300047673 Bacteria 6458
199 Ga0495626_0021433 3300048091 Bacteria 3207
200 Ga0496100_0011522 3300048903 Bacteria 5035
201 Ga0496101_0000498 3300048904 Bacteria 24657
202 Ga0496102_0013765 3300048905 Bacteria 7016
203 Ga0496102_0070613 3300048905 Bacteria 3207
204 Ga0496102_0138122 3300048905 Bacteria 2284
205 Ga0496107_0024184 3300048910 Bacteria 4297
206 Ga0496115_0077341 3300048918 Bacteria 2706
207 Ga0496116_0000563 3300048919 Bacteria 49675
208 Ga0496116_0006904 3300048919 Bacteria 10186
209 Ga0496117_0001836 3300048920 Bacteria 28725
210 Ga0496117_0009814 3300048920 Bacteria 8822
211 Ga0496117_0013289 3300048920 Bacteria 7194
212 Ga0496118_0001960 3300048921 Bacteria 29188
213 Ga0496118_0004686 3300048921 Bacteria 16028
214 Ga0496118_0014754 3300048921 Bacteria 7291
215 Ga0496119_0042142 3300048922 Bacteria 2898
216 Ga0496121_0000100 3300048924 Bacteria 198641
217 Ga0496121_0000303 3300048924 Bacteria 102261
218 Ga0496121_0003397 3300048924 Bacteria 22779
219 Ga0496121_0006531 3300048924 Bacteria 14419
220 Ga0496121_0009663 3300048924 Bacteria 11047
221 Ga0496121_0111912 3300048924 Bacteria 2080
222 Ga0496122_0014160 3300048925 Bacteria 7733
223 Ga0496123_0001413 3300048926 Bacteria 33550
224 Ga0496124_0000228 3300048927 Bacteria 109927
225 Ga0496124_0024209 3300048927 Bacteria 5526
226 Ga0496125_0016924 3300048928 Bacteria 6977
227 Ga0496125_0051104 3300048928 Bacteria 3413
228 Ga0496125_0068951 3300048928 Bacteria 2778
229 Ga0496126_0000050 3300048929 Bacteria 316466
230 Ga0496126_0003008 3300048929 Bacteria 21876
231 Ga0496126_0006857 3300048929 Bacteria 12626
232 Ga0495678_000072 3300049459 Bacteria 128270
233 Ga0495678_004959 3300049459 Bacteria 7503
234 Ga0495682_0000120 3300049460 Bacteria 68718
235 Ga0501032_0010482 3300049569 Bacteria 6684
236 Ga0501222_000796 3300049662 Bacteria 4539
237 nmdc:mga05p37_156249_c1 3300050507 Bacteria 2787
238 nmdc:mga0n895_7323_c1 3300050512 Bacteria 9462
239 nmdc:mga0a205_7478_c2 3300050515 Bacteria 7167
240 Ga0500618_002011 3300053125 Bacteria 8261
241 Ga0500618_004299 3300053125 Bacteria 4601
242 Ga0466962_0002184 3300061719 Bacteria 9251

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300031665 Ga0316575_10000642 Ga0316575_100006424 549
2 3300048929 Ga0496126_0006857 Ga0496126_0006857_2938_4686 549
3 3300031344 Ga0265316_10076302 Ga0265316_100763022 564
4 3300045836 Ga0466958_0072106 Ga0466958_0072106_382_2085 564
5 3300046520 Ga0495637_0001093 Ga0495637_0001093_12353_14122 564
6 3300046810 Ga0495660_0006380 Ga0495660_0006380_1456_3225 564
7 3300049459 Ga0495678_000072 Ga0495678_000072_7186_8955 564
8 3300046458 Ga0495591_006504 Ga0495591_006504_1891_3660 566
9 3300046506 Ga0495583_0003051 Ga0495583_0003051_3796_5565 566
10 3300046519 Ga0495632_0004191 Ga0495632_0004191_6512_8281 566
11 3300046522 Ga0495643_0004266 Ga0495643_0004266_7540_9309 566
12 3300046524 Ga0495648_0004569 Ga0495648_0004569_7580_9349 566
13 3300046665 Ga0495661_0004626 Ga0495661_0004626_1783_3552 566
14 3300046692 Ga0495671_0000507 Ga0495671_0000507_10378_12147 566
15 3300047320 Ga0495672_0005302 Ga0495672_0005302_456_2225 566
16 3300048922 Ga0496119_0042142 Ga0496119_0042142_1084_2883 568
17 3300002704 JGI25155J39150_1000190 JGI25155J39150_100019014 569
18 3300002705 JGI25156J39149_1000154 JGI25156J39149_10001548 569
19 3300002705 JGI25156J39149_1000796 JGI25156J39149_10007964 569
20 3300002738 JGI25154J39366_1000300 JGI25154J39366_100030017 569
21 3300002741 JGI25157J39369_1000169 JGI25157J39369_100016941 569
22 3300002741 JGI25157J39369_1000536 JGI25157J39369_10005365 569
23 3300003758 Ga0055532_1000017 Ga0055532_1000017166 569
24 3300025206 Ga0209435_100015 Ga0209435_100015181 569
25 3300025229 Ga0209147_100004 Ga0209147_1000041045 569
26 3300025242 Ga0209258_100226 Ga0209258_10022634 569
27 3300025246 Ga0209646_1000040 Ga0209646_1000040211 569
28 3300025250 Ga0209026_1000034 Ga0209026_1000034108 569
29 3300025256 Ga0209759_1000049 Ga0209759_100004995 569
30 3300042876 Ga0451577_0000020 Ga0451577_0000020_432733_434487 569
31 3300044673 Ga0453683_0018051 Ga0453683_0018051_504_2258 569
32 3300044712 Ga0453684_0000246 Ga0453684_0000246_57646_59400 569
33 3300044712 Ga0453684_0000943 Ga0453684_0000943_23097_24851 569
34 3300044712 Ga0453684_0005141 Ga0453684_0005141_977_2731 569
35 3300045051 Ga0451576_0000854 Ga0451576_0000854_43046_44800 569
36 3300049662 Ga0501222_000796 Ga0501222_000796_848_2617 569
37 3300030733 Ga0314311_1184308 Ga0314311_11843082 571
38 3300031731 Ga0307405_10004176 Ga0307405_100041766 571
39 3300031901 Ga0307406_10001352 Ga0307406_1000135212 571
40 3300031911 Ga0307412_10000929 Ga0307412_1000092913 571
41 3300032005 Ga0307411_10014140 Ga0307411_100141403 571
42 3300002067 JGI24735J21928_10001397 JGI24735J21928_100013973 572
43 3300013105 Ga0157369_10004616 Ga0157369_100046164 572
44 3300044712 Ga0453684_0000396 Ga0453684_0000396_56171_57925 572
45 3300046507 Ga0495606_0000032 Ga0495606_0000032_73117_74880 572
46 3300047443 Ga0495687_003113 Ga0495687_003113_7626_9425 572
47 3300048920 Ga0496117_0009814 Ga0496117_0009814_4751_6550 572
48 3300048921 Ga0496118_0004686 Ga0496118_0004686_11987_13786 572
49 3300048927 Ga0496124_0000228 Ga0496124_0000228_41018_42787 573
50 3300046515 Ga0495620_0001011 Ga0495620_0001011_10894_12672 574
51 3300003322 rootL2_10086432 rootL2_100864327 575
52 3300025295 Ga0209564_1014433 Ga0209564_10144332 575
53 3300046694 Ga0495649_0001744 Ga0495649_0001744_2079_3848 575
54 3300047323 Ga0495683_0000249 Ga0495683_0000249_40225_41994 575
55 iso_pu_bacteria 2928135762 2928139197 575
56 3300006844 Ga0075428_100180637 Ga0075428_1001806371 576
57 3300006871 Ga0075434_100043394 Ga0075434_1000433944 576
58 3300006948 Ga0099826_10000031 Ga0099826_10000031100 576
59 3300009147 Ga0114129_10061356 Ga0114129_100613563 576
60 3300027666 Ga0209282_1000011 Ga0209282_1000011105 576
61 3300046457 Ga0495590_0007418 Ga0495590_0007418_1291_3090 576
62 3300046474 Ga0495605_0003320 Ga0495605_0003320_5721_7520 576
63 3300046500 Ga0495596_0000260 Ga0495596_0000260_13455_15299 576
64 3300046506 Ga0495583_0013683 Ga0495583_0013683_781_2580 576
65 3300046513 Ga0495616_0019364 Ga0495616_0019364_1837_3636 576
66 3300047319 Ga0495674_0022362 Ga0495674_0022362_1912_3711 576
67 3300047320 Ga0495672_0019333 Ga0495672_0019333_816_2615 576
68 3300047323 Ga0495683_0004891 Ga0495683_0004891_5278_7077 576
69 3300050507 nmdc:mga05p37_156249_c1 nmdc:mga05p37_156249_c1_319_2064 576
70 3300050512 nmdc:mga0n895_7323_c1 nmdc:mga0n895_7323_c1_112_1857 576
71 3300050515 nmdc:mga0a205_7478_c2 nmdc:mga0a205_7478_c2_484_2229 576
72 3300046501 Ga0495607_0054959 Ga0495607_0054959_411_2255 577
73 3300046512 Ga0495610_0000935 Ga0495610_0000935_12937_14781 577
74 3300046538 Ga0495609_0000413 Ga0495609_0000413_20279_22123 577
75 3300046665 Ga0495661_0046219 Ga0495661_0046219_432_2276 577
76 3300046694 Ga0495649_0011715 Ga0495649_0011715_282_2126 577
77 3300048925 Ga0496122_0014160 Ga0496122_0014160_2061_3905 577
78 3300048926 Ga0496123_0001413 Ga0496123_0001413_19792_21636 577
79 3300048928 Ga0496125_0068951 Ga0496125_0068951_54_1898 577
80 3300046474 Ga0495605_0003455 Ga0495605_0003455_6100_7944 578
81 3300046513 Ga0495616_0000971 Ga0495616_0000971_379_2223 578
82 3300046692 Ga0495671_0000392 Ga0495671_0000392_14285_16129 578
83 3300047447 Ga0495685_011918 Ga0495685_011918_50_1894 578
84 3300048919 Ga0496116_0006904 Ga0496116_0006904_7597_9441 578
85 3300048924 Ga0496121_0003397 Ga0496121_0003397_20026_21870 578
86 3300045051 Ga0451576_0000690 Ga0451576_0000690_10177_11925 579
87 3300047443 Ga0495687_028279 Ga0495687_028279_196_1971 579
88 iso_pu_bacteria 2602042109 2603869013 579
89 3300006946 Ga0079104_1000083 Ga0079104_1000083106 583
90 3300027111 Ga0209281_1000130 Ga0209281_1000130105 583
91 3300039447 Ga0436361_0428504 Ga0436361_0428504_1467_3230 583
92 3300046474 Ga0495605_0002076 Ga0495605_0002076_8976_10736 583
93 iso_pu_bacteria 2547132103 2547372894 583
94 iso_pu_bacteria 2843690924 2843692499 583
95 3300027907 Ga0207428_10023102 Ga0207428_100231023 584
96 3300042010 Ga0439452_000458 Ga0439452_000458_19357_21120 584
97 3300042137 Ga0450902_001206 Ga0450902_001206_1129_2892 584
98 3300046460 Ga0495638_0013814 Ga0495638_0013814_1222_2985 584
99 3300047320 Ga0495672_0008142 Ga0495672_0008142_3400_5163 584
100 3300025294 Ga0209025_1002094 Ga0209025_100209413 585
101 3300006058 Ga0075432_10000025 Ga0075432_1000002516 586
102 3300006058 Ga0075432_10002800 Ga0075432_100028002 586
103 3300017792 Ga0163161_10000417 Ga0163161_100004176 586
104 3300017792 Ga0163161_10002931 Ga0163161_100029315 586
105 3300041405 Ga0439438_008443 Ga0439438_008443_276_2045 586
106 3300046455 Ga0495603_0029245 Ga0495603_0029245_572_2341 586
107 3300046458 Ga0495591_005869 Ga0495591_005869_3558_5327 586
108 3300046463 Ga0495653_0000916 Ga0495653_0000916_10223_11992 586
109 3300046491 Ga0495584_0007635 Ga0495584_0007635_111_1898 586
110 3300046507 Ga0495606_0003770 Ga0495606_0003770_10447_12216 586
111 3300046507 Ga0495606_0022950 Ga0495606_0022950_884_2653 586
112 3300046674 Ga0495588_0001451 Ga0495588_0001451_7819_9621 586
113 3300047321 Ga0495676_0000443 Ga0495676_0000443_9440_11209 586
114 3300049459 Ga0495678_004959 Ga0495678_004959_1203_2972 586
115 3300049460 Ga0495682_0000120 Ga0495682_0000120_41534_43303 586
116 3300049569 Ga0501032_0010482 Ga0501032_0010482_2928_4697 586
117 3300053125 Ga0500618_002011 Ga0500618_002011_4313_6082 586
118 iso_pu_bacteria 2501025501 2501070724 588
119 iso_pu_bacteria 2510917015 2511102163 588
120 3300009177 Ga0105248_10136499 Ga0105248_101364992 591
121 3300013306 Ga0163162_10024544 Ga0163162_100245445 591
122 3300013308 Ga0157375_10009383 Ga0157375_100093835 591
123 3300046460 Ga0495638_0003371 Ga0495638_0003371_6928_8703 591
124 3300046474 Ga0495605_0003441 Ga0495605_0003441_2780_4555 591
125 3300046492 Ga0495585_0027796 Ga0495585_0027796_937_2712 591
126 3300046516 Ga0495628_0013775 Ga0495628_0013775_3421_5196 591
127 3300046660 Ga0495625_0022592 Ga0495625_0022592_320_2095 591
128 3300046684 Ga0495669_0003430 Ga0495669_0003430_3938_5713 591
129 3300046691 Ga0495670_0019096 Ga0495670_0019096_584_2359 591
130 3300046794 Ga0495589_0002675 Ga0495589_0002675_539_2314 591
131 3300048091 Ga0495626_0021433 Ga0495626_0021433_291_2066 591
132 3300048910 Ga0496107_0024184 Ga0496107_0024184_548_2323 591
133 3300048918 Ga0496115_0077341 Ga0496115_0077341_327_2102 591
134 3300046471 Ga0495650_0001147 Ga0495650_0001147_21521_23299 592
135 iso_pu_bacteria 2508501125 2509132490 592
136 3300003320 rootH2_10040484 rootH2_100404843 593
137 3300003841 Ga0055541_1000216 Ga0055541_10002163 593
138 3300016635 Ga0183361_10002 Ga0183361_1000299 593
139 3300025225 Ga0209566_100487 Ga0209566_10048718 593
140 3300025256 Ga0209759_1002960 Ga0209759_10029602 593
141 3300028800 Ga0265338_10000385 Ga0265338_1000038562 593
142 3300046514 Ga0495618_0004012 Ga0495618_0004012_6197_8020 593
143 3300046517 Ga0495630_0034088 Ga0495630_0034088_1479_3302 593
144 3300046794 Ga0495589_0002620 Ga0495589_0002620_1243_3066 593
145 3300048920 Ga0496117_0001836 Ga0496117_0001836_5470_7269 593
146 3300048921 Ga0496118_0001960 Ga0496118_0001960_21473_23272 593
147 3300048929 Ga0496126_0000050 Ga0496126_0000050_98704_100503 593
148 3300053125 Ga0500618_004299 Ga0500618_004299_1536_3320 593
149 3300003775 Ga0055524_1000838 Ga0055524_100083815 595
150 3300003784 Ga0055534_1000390 Ga0055534_100039015 595
151 3300025263 Ga0209565_1000523 Ga0209565_100052315 595
152 3300025291 Ga0209675_1000552 Ga0209675_100055214 595
153 3300025295 Ga0209564_1001284 Ga0209564_100128414 595
154 3300025299 Ga0209256_1001955 Ga0209256_10019557 595
155 3300047320 Ga0495672_0005743 Ga0495672_0005743_2987_4801 595
156 3300047320 Ga0495672_0007181 Ga0495672_0007181_4280_6094 595
157 3300047319 Ga0495674_0011949 Ga0495674_0011949_676_2484 596
158 3300044683 Ga0466965_0002604 Ga0466965_0002604_2019_3830 597
159 3300044693 Ga0466961_0052047 Ga0466961_0052047_188_1999 597
160 3300044719 Ga0466971_0023275 Ga0466971_0023275_482_2293 597
161 3300044842 Ga0466957_0004752 Ga0466957_0004752_2267_4078 597
162 3300048924 Ga0496121_0000100 Ga0496121_0000100_128793_130775 597
163 iso_pu_bacteria 2519103095 2519461368 597
164 iso_pu_bacteria 2519103095 2519462005 597
165 iso_pu_bacteria 2582581311 2585290853 597
166 iso_pu_bacteria 2816332253 2817258272 597
167 iso_pu_bacteria 2816332256 2817281314 597
168 iso_pu_bacteria 2816332286 2817451998 597
169 iso_pu_bacteria 8020807995 8020808051 597
170 iso_pu_bacteria 8040167225 8040167366 597
171 iso_pu_bacteria 8040173305 8040175377 597
172 3300047322 Ga0495680_0035049 Ga0495680_0035049_760_2574 598
173 3300044656 Ga0466969_0006362 Ga0466969_0006362_803_2620 599
174 3300044693 Ga0466961_0040686 Ga0466961_0040686_257_2074 599
175 3300044719 Ga0466971_0005610 Ga0466971_0005610_1646_3463 599
176 iso_pu_bacteria 2883087390 2883087651 599
177 3300003771 Ga0055526_1003849 Ga0055526_10038498 600
178 3300025295 Ga0209564_1001582 Ga0209564_10015828 600
179 iso_pu_bacteria 2510065045 2510247705 600
180 iso_pu_bacteria 2512047030 2512349581 600
181 iso_pu_bacteria 2513237082 2513556681 600
182 iso_pu_bacteria 2513237151 2513962048 600
183 iso_pu_bacteria 2515154122 2515680476 600
184 iso_pu_bacteria 2519103095 2519463054 600
185 iso_pu_bacteria 2526164713 2527078686 600
186 iso_pu_bacteria 2526164713 2527080758 600
187 iso_pu_bacteria 2582581311 2585293408 600
188 iso_pu_bacteria 2599185240 2599745674 600
189 iso_pu_bacteria 2599185355 2600207582 600
190 iso_pu_bacteria 2600255067 2600815258 600
191 iso_pu_bacteria 2675903129 2676745313 600
192 iso_pu_bacteria 2718217991 2719638125 600
193 iso_pu_bacteria 2744054900 2746087945 600
194 iso_pu_bacteria 2744054901 2746098054 600
195 iso_pu_bacteria 2842324504 2842327036 600
196 iso_pu_bacteria 2842348783 2842350641 600
197 iso_pu_bacteria 2842454564 2842456618 600
198 iso_pu_bacteria 2863421361 2863423667 600
199 iso_pu_bacteria 2870068957 2870074833 600
200 iso_pu_bacteria 2904564687 2904568149 600
201 iso_pu_bacteria 2904571731 2904575126 600
202 iso_pu_bacteria 2928058823 2928063331 600
203 iso_pu_bacteria 2928058823 2928063946 600
204 iso_pu_bacteria 2928157003 2928157740 600
205 iso_pu_bacteria 2928163908 2928165493 600
206 iso_pu_bacteria 2928170801 2928174160 600
207 iso_pu_bacteria 2928536128 2928536644 600
208 iso_pu_bacteria 2981990288 2981990758 600
209 iso_pu_bacteria 641736154 642414929 600
210 iso_pu_bacteria 8018845410 8018851297 600
211 iso_pu_bacteria 8020945358 8020948820 600
212 iso_pu_bacteria 8040167225 8040170154 600
213 3300003187 JGI25151J46595_10002017 JGI25151J46595_100020175 601
214 3300003771 Ga0055526_1003431 Ga0055526_10034311 601
215 3300003781 Ga0055536_1000380 Ga0055536_10003806 601
216 3300003784 Ga0055534_1000927 Ga0055534_10009276 601
217 3300025291 Ga0209675_1000149 Ga0209675_100014976 601
218 3300025292 Ga0209676_1000014 Ga0209676_1000014729 601
219 3300025294 Ga0209025_1001123 Ga0209025_100112322 601
220 3300025294 Ga0209025_1001835 Ga0209025_100183514 601
221 3300025295 Ga0209564_1001045 Ga0209564_100104524 601
222 3300046454 Ga0495592_0000805 Ga0495592_0000805_2340_4163 601
223 3300046459 Ga0495629_0033535 Ga0495629_0033535_1244_3067 601
224 3300046472 Ga0495580_0006706 Ga0495580_0006706_6712_8535 601
225 3300048905 Ga0496102_0138122 Ga0496102_0138122_299_2122 601
226 3300048919 Ga0496116_0000563 Ga0496116_0000563_32808_34631 601
227 3300044693 Ga0466961_0002219 Ga0466961_0002219_6447_8255 602
228 3300009011 Ga0105251_10013144 Ga0105251_100131443 603
229 3300025302 Ga0207426_1002283 Ga0207426_10022835 603
230 3300044684 Ga0466966_0000069 Ga0466966_0000069_64062_65873 603
231 3300044693 Ga0466961_0001976 Ga0466961_0001976_8445_10256 603
232 3300045049 Ga0466959_0022431 Ga0466959_0022431_2036_3847 603
233 3300045976 Ga0466967_0185746 Ga0466967_0185746_38_1897 603
234 3300047673 Ga0495593_0007335 Ga0495593_0007335_2140_3999 603
235 3300048903 Ga0496100_0011522 Ga0496100_0011522_936_2783 603
236 3300048904 Ga0496101_0000498 Ga0496101_0000498_4369_6216 603
237 3300048905 Ga0496102_0013765 Ga0496102_0013765_3787_5634 603
238 3300048924 Ga0496121_0009663 Ga0496121_0009663_6861_8708 603
239 3300048928 Ga0496125_0051104 Ga0496125_0051104_1351_3198 603
240 3300001979 JGI24740J21852_10016318 JGI24740J21852_100163181 604
241 3300001989 JGI24739J22299_10000827 JGI24739J22299_100008273 604
242 3300001989 JGI24739J22299_10009268 JGI24739J22299_100092682 604
243 3300002067 JGI24735J21928_10018156 JGI24735J21928_100181562 604
244 3300002705 JGI25156J39149_1000180 JGI25156J39149_100018028 604
245 3300003320 rootH2_10018358 rootH2_100183585 604
246 3300003756 Ga0055533_1000898 Ga0055533_100089810 604
247 3300003758 Ga0055532_1000312 Ga0055532_100031218 604
248 3300005327 Ga0070658_10010531 Ga0070658_100105313 604
249 3300005339 Ga0070660_100000003 Ga0070660_10000000399 604
250 3300005366 Ga0070659_100000024 Ga0070659_10000002436 604
251 3300005563 Ga0068855_100002090 Ga0068855_1000020904 604
252 3300009093 Ga0105240_10048007 Ga0105240_100480073 604
253 3300009551 Ga0105238_10019940 Ga0105238_100199404 604
254 3300010375 Ga0105239_10049778 Ga0105239_100497782 604
255 3300015261 Ga0182006_1032691 Ga0182006_10326912 604
256 3300015262 Ga0182007_10001998 Ga0182007_100019987 604
257 3300025226 Ga0209674_100112 Ga0209674_100112105 604
258 3300025229 Ga0209147_100153 Ga0209147_10015319 604
259 3300025254 Ga0209148_1005295 Ga0209148_10052952 604
260 3300025256 Ga0209759_1000125 Ga0209759_100012514 604
261 3300025904 Ga0207647_10003600 Ga0207647_100036008 604
262 3300025919 Ga0207657_10000002 Ga0207657_10000002322 604
263 3300025924 Ga0207694_10008506 Ga0207694_100085064 604
264 3300025932 Ga0207690_10000014 Ga0207690_1000001498 604
265 3300025949 Ga0207667_10000849 Ga0207667_1000084911 604
266 3300028800 Ga0265338_10001292 Ga0265338_1000129239 604
267 3300028800 Ga0265338_10012391 Ga0265338_100123912 604
268 3300037312 Ga0395899_0000005 Ga0395899_0000005_246805_248619 604
269 3300037312 Ga0395899_0056673 Ga0395899_0056673_64_1887 604
270 3300037418 Ga0395900_0000003 Ga0395900_0000003_524348_526162 604
271 3300037466 Ga0395898_0000003 Ga0395898_0000003_246825_248639 604
272 3300037466 Ga0395898_0005671 Ga0395898_0005671_11472_13295 604
273 3300038443 Ga0395901_0014859 Ga0395901_0014859_4350_6173 604
274 3300044656 Ga0466969_0007809 Ga0466969_0007809_810_2624 604
275 3300044658 Ga0466972_0016309 Ga0466972_0016309_681_2495 604
276 3300044672 Ga0466982_0009050 Ga0466982_0009050_1752_3566 604
277 3300044684 Ga0466966_0000490 Ga0466966_0000490_20784_22598 604
278 3300044693 Ga0466961_0033687 Ga0466961_0033687_211_2025 604
279 3300044694 Ga0466963_0003615 Ga0466963_0003615_2980_4794 604
280 3300044765 Ga0466970_0029822 Ga0466970_0029822_566_2380 604
281 3300044842 Ga0466957_0002080 Ga0466957_0002080_5925_7739 604
282 3300044901 Ga0466960_0003230 Ga0466960_0003230_1994_3808 604
283 3300045049 Ga0466959_0044926 Ga0466959_0044926_215_2029 604
284 3300048905 Ga0496102_0070613 Ga0496102_0070613_1131_2945 604
285 3300048920 Ga0496117_0013289 Ga0496117_0013289_5126_6940 604
286 3300048921 Ga0496118_0014754 Ga0496118_0014754_1929_3743 604
287 3300048924 Ga0496121_0000303 Ga0496121_0000303_38197_40011 604
288 3300048924 Ga0496121_0006531 Ga0496121_0006531_2038_3852 604
289 3300048924 Ga0496121_0111912 Ga0496121_0111912_114_1928 604
290 3300048927 Ga0496124_0024209 Ga0496124_0024209_3320_5134 604
291 3300048928 Ga0496125_0016924 Ga0496125_0016924_2127_3941 604
292 3300048929 Ga0496126_0003008 Ga0496126_0003008_16348_18162 604
293 3300061719 Ga0466962_0002184 Ga0466962_0002184_5090_6904 604

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05947

T6SS_TssF

Type VI secretion system, TssF

63

657

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
6n38-assembly1.cif.gz_H structure of the type vi secretion system tssk-tssf-tssg baseplate subcomplex revealed by cryo-electron microscopy - full map sharpened 0.9037 48 604
6n38-assembly1.cif.gz_H structure of the type vi secretion system tssk-tssf-tssg baseplate subcomplex revealed by cryo-electron microscopy - full map sharpened 0.9005 48 604
6n38-assembly1.cif.gz_I structure of the type vi secretion system tssk-tssf-tssg baseplate subcomplex revealed by cryo-electron microscopy - full map sharpened 0.8852 50 604
6n38-assembly1.cif.gz_I structure of the type vi secretion system tssk-tssf-tssg baseplate subcomplex revealed by cryo-electron microscopy - full map sharpened 0.882 50 604
6gj1-assembly1.cif.gz_A the baseplate complex from the type vi secretion system 0.6933 8 594
ID Description Score Start End Superfamily
2d8bA01 Alpha Beta;3-Layer(aba) Sandwich;Severin;Severin 0.7469 523 547 3.40.20.10
af_Q8K284_174_250_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.6107 389 415 1.10.10.10
af_Q4E562_118_307_1.50.40.10 Mainly Alpha;Alpha/alpha barrel;Mitochondrial carrier fold;Mitochondrial carrier domain 0.6092 5 79 1.50.40.10
af_Q10LJ2_305_379_3.30.70.1350 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Cation efflux protein, cytoplasmic domain 0.6017 520 585 3.30.70.1350
af_K7K8J1_302_391_3.30.70.1350 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Cation efflux protein, cytoplasmic domain 0.5986 520 585 3.30.70.1350
ID Description Score Start End GO Terms
AF-A0A444JEQ0-F1-model_v4 Type VI secretion system protein 0.9751 512 590
AF-A0A381CRI1-F1-model_v4 deleted 0.9676 519 596
AF-A0A158D103-F1-model_v4 Type VI secretion protein 0.9653 79 604
AF-A0A2U3ES69-F1-model_v4 Type VI secretion system baseplate subunit TssF 0.9652 520 595 GO:0016020
AF-A0A158D103-F1-model_v4 Type VI secretion protein 0.9617 79 604

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pLDDT pTM Quality
82.91 0.8 High
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Predicted Structure (AlphaFold2)

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