F391228

General Info

Members Datasets Scaffolds Average Seq Length
292 222 584 785

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2565956761|2566996942
Length 836
Sequence VKPAKRNGAKHPASDHSTADHSVADDGKFFGKPIPREEDTRLLSGQGRYLDDLGHNALIAAFVRSPHAHARIIDIDIDQALEVPGVHAIYTYEDLLADTPEMAENLPLLIPHPGIIAPRNGYPLAKDEVKHVGEAIAMVVADNRYIAEDACAKIDVTYEALKPVVGIDVARTAANAVHADVPDNVAAHLQHGFGDLDDELAAAPHRLTLDLEIERSASMPMEGKGVYARWDGDENTLTFWTSTQTSTSARAAIAARLGMALNKVHCIAPDVGGGFGVKIVHPWPEEVMITWAARRLGQAGISCEVKWVEDRREHFISSAHERGQIQKVDIGFDDEGRLLAFDFTFWHDNGAYLPYGIIVMINTATQVLGPYKPKSFRVNAYSLYTNTVIVTPYRGAGRPQAVFAMERSMDAIAKYLKKDKIAVREANFIRPEDMPYDFGLMFQDGRPLIYDTGDYQAGIDKLKKLIDWDGFPEYQRKARAEGRSVGIGIGAYVEGTGPGPYEGAHVVVETSGKVKAATGLTTQGQGHQTAFAQIVADDLGVKVSDVEIVTGDTRRFGYAVGTFASRGAVMSGSAFHVAAQMVAEKAKKIASGILDLPETELELREGHVCKIGTEAGVEGTSVPLSVVAVLSNPLRYAFDRESKLATGFAKTDTDMSKPPIPEGEQPGLEATGYYSPPSSTFASGVHAAIVETDPVTAEITVRRYVVIHDCGNVINPRIVEGQVMGAVAQGIGGALYERIVYDEHGQMLNASYMDFLMPFVTEMPDSLEMDHTVTPSGLNPLGMKGAGEAGVIPTSAVIAAAIEDAEGISITSMPISPSELFELRLAHAGSSSEENA

Samples

Sample ID Description Type Environment
1 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
2 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
3 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
4 3300003756 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 Metagenome Endosphere
5 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
6 3300003760 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 Metagenome Endosphere
7 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
8 3300003762 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 Metagenome Endosphere
9 3300003763 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 Metagenome Endosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
14 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
15 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
16 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
20 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
21 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
22 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
23 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
24 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
25 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
27 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
28 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
29 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
30 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
31 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
32 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
37 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
38 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
39 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
40 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
41 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
42 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
43 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
44 3300016635 Rizhosphere microbial communities from mature sugarcane plants Campinas, Sao Paulo, Brazil - 001.1_A10 Metagenome Rhizosphere
45 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
46 3300025226 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
47 3300025228 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
48 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
49 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
50 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
51 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
53 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
54 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
55 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
56 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
83 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
84 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
85 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
86 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
87 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
88 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
89 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
90 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
91 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
92 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
93 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
94 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
95 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
96 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
97 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
98 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
99 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
100 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
101 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
102 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
103 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
104 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
105 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
106 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
107 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
108 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
109 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
110 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
111 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
112 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
113 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
114 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
115 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
116 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
117 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
118 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
119 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
120 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
121 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
122 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
123 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
124 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
125 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
126 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
127 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
128 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
129 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
130 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
131 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
132 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
133 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
134 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
135 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
136 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
137 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
138 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
139 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
140 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
141 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
142 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
143 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
144 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
145 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
146 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
147 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
148 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
149 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
150 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
151 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
152 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
153 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
154 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
155 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
156 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
157 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
158 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
159 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
160 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
161 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
162 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
163 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
164 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
165 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
166 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
167 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
168 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
169 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
170 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
171 3300049459 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 rhizosphere Metagenome Rhizosphere
172 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
174 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
175 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
176 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
177 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
178 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
180 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
181 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
182 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
183 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
184 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
185 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
186 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
187 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
188 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
189 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
190 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
191 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
192 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
193 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
194 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
195 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
196 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
197 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
198 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
199 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
200 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
201 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
202 2643221711 Terrabacter sp. Root85 Isolate Unclassified
203 2791355137 Paraburkholderia piptadeniae STM7183 Isolate Unclassified
204 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
205 2808606365 Phycicoccus sp. SLBN-51 Isolate Unclassified
206 2811994882 Terrabacter sp. SLBN-196 Isolate Unclassified
207 2828305725 Xanthobacter tagetidis DSM 11105 Isolate Unclassified
208 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
209 2904483920 Paraburkholderia caledonica 575 Isolate Unclassified
210 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
211 2904615490 Paraburkholderia franconis CNPSo 3157 Isolate Unclassified
212 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
213 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
214 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
215 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
216 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
217 2919527303 Paraburkholderia strydomiana 3827 Isolate Unclassified
218 2922554459 Rhodococcus sp. 66b Isolate Unclassified
219 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
220 2929199973 Roseomonas sp. R-73070 Hybrid assembly Isolate Unclassified
221 8055909800 Plastoroseomonas hellenica LMG 31523 Isolate Unclassified
222 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 92.47
Metatranscriptomes 0
Isolates 7.53

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 8.9
Nodule 0
Rhizoplane 7.88
Rhizosphere 72.6
Stem 0
Stem Tuber 0.34
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10004025 3300002459 Bacteria 2975
2 JGI25156J39149_1002142 3300002705 Bacteria 7431
3 JGI25153J46596_10002966 3300003215 Bacteria 9614
4 Ga0055533_1000072 3300003756 Bacteria 144571
5 Ga0055532_1000013 3300003758 Bacteria 380677
6 Ga0055527_1000010 3300003760 Bacteria 380677
7 Ga0055535_1000010 3300003761 Bacteria 380677
8 Ga0055542_1000016 3300003762 Bacteria 380677
9 Ga0055529_1000012 3300003763 Bacteria 380677
10 Ga0070687_100003704 3300005343 Bacteria 5982
11 Ga0070661_100057932 3300005344 Bacteria 2839
12 Ga0070668_100024158 3300005347 Bacteria 4603
13 Ga0070671_100012122 3300005355 Bacteria 6937
14 Ga0070671_100023730 3300005355 Bacteria 5020
15 Ga0070714_100002944 3300005435 Bacteria 12609
16 Ga0070714_100037874 3300005435 Bacteria 4054
17 Ga0070713_100022077 3300005436 Bacteria 4912
18 Ga0070710_10010309 3300005437 Bacteria 4589
19 Ga0070710_10031557 3300005437 Bacteria 2862
20 Ga0070681_10002613 3300005458 Bacteria 16532
21 Ga0070699_100060676 3300005518 Bacteria 3277
22 Ga0070672_100004225 3300005543 Bacteria 9390
23 Ga0070702_100001213 3300005615 Bacteria 10437
24 Ga0068859_100024330 3300005617 Bacteria 6077
25 Ga0068864_100019093 3300005618 Bacteria 5729
26 Ga0068858_100009856 3300005842 Bacteria 9079
27 Ga0068862_100015217 3300005844 Bacteria 6388
28 Ga0081455_10010698 3300005937 Bacteria 9280
29 Ga0081455_10022331 3300005937 Bacteria 5917
30 Ga0081455_10051284 3300005937 Bacteria 3540
31 Ga0081538_10001953 3300005981 Bacteria 20648
32 Ga0081540_1002396 3300005983 Bacteria 15290
33 Ga0081540_1004700 3300005983 Bacteria 10333
34 Ga0081540_1022545 3300005983 Bacteria 3717
35 Ga0081539_10000423 3300005985 Bacteria 89970
36 Ga0070717_10002258 3300006028 Bacteria 13509
37 Ga0075365_10001784 3300006038 Bacteria 10036
38 Ga0075365_10016826 3300006038 Bacteria 4460
39 Ga0070715_10004339 3300006163 Bacteria 4638
40 Ga0070712_100018097 3300006175 Bacteria 4570
41 Ga0075428_100001479 3300006844 Bacteria 25140
42 Ga0075428_100061151 3300006844 Bacteria 4124
43 Ga0075430_100001668 3300006846 Bacteria 18143
44 Ga0075430_100044767 3300006846 Bacteria 3741
45 Ga0075431_100001451 3300006847 Bacteria 21857
46 Ga0075431_100005769 3300006847 Bacteria 12247
47 Ga0075431_100054294 3300006847 Bacteria 4131
48 Ga0075429_100024042 3300006880 Bacteria 5285
49 Ga0097620_100024330 3300006931 Bacteria 6077
50 Ga0111539_10018100 3300009094 Bacteria 8726
51 Ga0111539_10070208 3300009094 Bacteria 4135
52 Ga0105247_10004399 3300009101 Bacteria 8992
53 Ga0114129_10003043 3300009147 Bacteria 23503
54 Ga0114129_10003493 3300009147 Bacteria 22096
55 Ga0114129_10006042 3300009147 Bacteria 17168
56 Ga0114129_10032659 3300009147 Bacteria 7354
57 Ga0105248_10011788 3300009177 Bacteria 9645
58 Ga0105248_10056328 3300009177 Bacteria 4411
59 Ga0157374_10015406 3300013296 Bacteria 6706
60 Ga0163163_10076894 3300014325 Bacteria 3333
61 Ga0183361_10005 3300016635 Bacteria 413599
62 Ga0213872_10004628 3300021361 Bacteria 7250
63 Ga0209674_100011 3300025226 Bacteria 997175
64 Ga0209672_100002 3300025228 Bacteria 1733325
65 Ga0209147_100003 3300025229 Bacteria 1733325
66 Ga0207427_100472 3300025231 Bacteria 21964
67 Ga0209258_100042 3300025242 Bacteria 380729
68 Ga0209148_1000006 3300025254 Bacteria 1733325
69 Ga0209759_1000051 3300025256 Bacteria 214016
70 Ga0209233_1000033 3300025261 Bacteria 596094
71 Ga0209455_1000003 3300025272 Bacteria 1471893
72 Ga0209758_1000302 3300025297 Bacteria 96619
73 Ga0207692_10014909 3300025898 Bacteria 3407
74 Ga0207688_10000033 3300025901 Bacteria 46898
75 Ga0207643_10006216 3300025908 Bacteria 6390
76 Ga0207707_10031578 3300025912 Bacteria 4635
77 Ga0207693_10009432 3300025915 Bacteria 7955
78 Ga0207663_10012514 3300025916 Bacteria 4589
79 Ga0207662_10003898 3300025918 Bacteria 7771
80 Ga0207657_10054361 3300025919 Bacteria 3463
81 Ga0207650_10013240 3300025925 Bacteria 5706
82 Ga0207700_10019724 3300025928 Bacteria 4560
83 Ga0207664_10009504 3300025929 Bacteria 6825
84 Ga0207644_10043783 3300025931 Bacteria 3178
85 Ga0207706_10003167 3300025933 Bacteria 15802
86 Ga0207709_10031498 3300025935 Bacteria 3098
87 Ga0207670_10009701 3300025936 Bacteria 5508
88 Ga0207665_10000597 3300025939 Bacteria 24250
89 Ga0207691_10009323 3300025940 Bacteria 9419
90 Ga0207711_10003319 3300025941 Bacteria 13959
91 Ga0207711_10015857 3300025941 Bacteria 6252
92 Ga0207711_10069738 3300025941 Bacteria 3048
93 Ga0207689_10027065 3300025942 Bacteria 4800
94 Ga0207712_10043823 3300025961 Bacteria 3089
95 Ga0207639_10018940 3300026041 Bacteria 4901
96 Ga0207678_10014774 3300026067 Bacteria 6871
97 Ga0207708_10000124 3300026075 Bacteria 59953
98 Ga0207648_10001663 3300026089 Bacteria 24358
99 Ga0207676_10008256 3300026095 Bacteria 7408
100 Ga0207676_10027247 3300026095 Bacteria 4255
101 Ga0207683_10009531 3300026121 Bacteria 8276
102 Ga0207683_10085624 3300026121 Bacteria 2801
103 Ga0265338_10013422 3300028800 Bacteria 9256
104 Ga0265332_10001347 3300031238 Bacteria 13912
105 Ga0265325_10000599 3300031241 Bacteria 26290
106 Ga0265340_10001163 3300031247 Bacteria 15063
107 Ga0265339_10000143 3300031249 Bacteria 59799
108 Ga0265339_10006199 3300031249 Bacteria 7873
109 Ga0265313_10000514 3300031595 Bacteria 40569
110 Ga0265314_10004980 3300031711 Bacteria 12111
111 Ga0265314_10026238 3300031711 Bacteria 4379
112 Ga0265342_10000766 3300031712 Bacteria 32726
113 Ga0307410_10017441 3300031852 Bacteria 4312
114 Ga0307412_10000249 3300031911 Bacteria 34960
115 Ga0307412_10006006 3300031911 Bacteria 6843
116 Ga0307409_100000210 3300031995 Bacteria 23319
117 Ga0307416_100000328 3300032002 Bacteria 24539
118 Ga0307415_100001433 3300032126 Bacteria 11404
119 Ga0307415_100014852 3300032126 Bacteria 4593
120 Ga0373943_0012087 3300035170 Bacteria 3888
121 Ga0373931_0005417 3300035691 Bacteria 5897
122 Ga0373935_0010957 3300035692 Bacteria 5445
123 Ga0373927_0023062 3300035695 Bacteria 4076
124 Ga0373947_0037957 3300035725 Bacteria 2859
125 Ga0373925_0023856 3300037068 Bacteria 4462
126 Ga0373925_0032096 3300037068 Bacteria 3864
127 Ga0395900_0051076 3300037418 Bacteria 4259
128 Ga0395898_0039916 3300037466 Bacteria 4644
129 Ga0395901_0005351 3300038443 Bacteria 12972
130 Ga0436365_1805825 3300039437 Bacteria 6266
131 Ga0436360_0139436 3300039438 Bacteria 2703
132 Ga0436361_1189806 3300039447 Bacteria 31675
133 Ga0451577_0045351 3300042876 Bacteria 3936
134 Ga0495592_0012203 3300046454 Bacteria 6519
135 Ga0495592_0017649 3300046454 Bacteria 5424
136 Ga0495590_0000954 3300046457 Bacteria 12763
137 Ga0495591_000951 3300046458 Bacteria 19801
138 Ga0495629_0009789 3300046459 Bacteria 6996
139 Ga0495629_0025988 3300046459 Bacteria 4160
140 Ga0495629_0037336 3300046459 Bacteria 3425
141 Ga0495638_0001976 3300046460 Bacteria 17521
142 Ga0495651_0001374 3300046462 Bacteria 18858
143 Ga0495651_0006408 3300046462 Bacteria 9007
144 Ga0495653_0025830 3300046463 Bacteria 4712
145 Ga0495650_0001868 3300046471 Bacteria 18826
146 Ga0495650_0002308 3300046471 Bacteria 15817
147 Ga0495650_0028070 3300046471 Bacteria 2590
148 Ga0495580_0003226 3300046472 Bacteria 13955
149 Ga0495582_0002779 3300046473 Bacteria 9769
150 Ga0495582_0009531 3300046473 Bacteria 5349
151 Ga0495584_0030042 3300046491 Bacteria 2754
152 Ga0495596_0002001 3300046500 Bacteria 11220
153 Ga0495606_0005848 3300046507 Bacteria 11599
154 Ga0495606_0006822 3300046507 Bacteria 10425
155 Ga0495608_0003138 3300046511 Bacteria 11803
156 Ga0495608_0033804 3300046511 Bacteria 3453
157 Ga0495618_0001368 3300046514 Bacteria 16411
158 Ga0495618_0010094 3300046514 Bacteria 5710
159 Ga0495620_0005727 3300046515 Bacteria 6911
160 Ga0495630_0005349 3300046517 Bacteria 9055
161 Ga0495630_0006277 3300046517 Bacteria 8442
162 Ga0495630_0012382 3300046517 Bacteria 6192
163 Ga0495666_0003781 3300046526 Bacteria 7655
164 Ga0495665_0019427 3300046531 Bacteria 3654
165 Ga0495640_0023674 3300046533 Bacteria 4469
166 Ga0495587_0004045 3300046536 Bacteria 9709
167 Ga0495598_0001925 3300046537 Bacteria 4206
168 Ga0495668_0000305 3300046616 Bacteria 67781
169 Ga0495611_0004443 3300046648 Bacteria 6070
170 Ga0495625_0022239 3300046660 Bacteria 4865
171 Ga0495661_0017772 3300046665 Bacteria 4687
172 Ga0495661_0030074 3300046665 Bacteria 3461
173 Ga0495588_0026960 3300046674 Bacteria 2870
174 Ga0495623_0002140 3300046679 Bacteria 13193
175 Ga0495646_0009189 3300046680 Bacteria 6272
176 Ga0495646_0014464 3300046680 Bacteria 5018
177 Ga0495647_0005607 3300046681 Bacteria 4122
178 Ga0495613_0015302 3300046689 Bacteria 5701
179 Ga0495624_0000829 3300046690 Bacteria 24439
180 Ga0495589_0003553 3300046794 Bacteria 8431
181 Ga0495600_0000472 3300046809 Bacteria 20941
182 Ga0495600_0000688 3300046809 Bacteria 17669
183 Ga0495581_0009530 3300047315 Bacteria 5620
184 Ga0495604_0000684 3300047317 Bacteria 28709
185 Ga0495674_0001033 3300047319 Bacteria 26729
186 Ga0495672_0023963 3300047320 Bacteria 3939
187 Ga0495680_0016509 3300047322 Bacteria 6338
188 Ga0495683_0004419 3300047323 Bacteria 7981
189 Ga0495683_0009639 3300047323 Bacteria 5140
190 Ga0495687_000125 3300047443 Bacteria 118053
191 Ga0495675_0001021 3300047444 Bacteria 17002
192 Ga0495679_000459 3300047446 Bacteria 29986
193 Ga0495593_0004521 3300047673 Bacteria 8263
194 Ga0495593_0017886 3300047673 Bacteria 3991
195 Ga0495602_0004142 3300048088 Bacteria 15107
196 Ga0495614_0003344 3300048089 Bacteria 7170
197 Ga0495614_0007570 3300048089 Bacteria 4832
198 Ga0496100_0003947 3300048903 Bacteria 7794
199 Ga0496101_0008106 3300048904 Bacteria 6853
200 Ga0496102_0012676 3300048905 Bacteria 7301
201 Ga0496103_0018516 3300048906 Bacteria 4178
202 Ga0496104_0001327 3300048907 Bacteria 21357
203 Ga0496104_0004650 3300048907 Bacteria 11943
204 Ga0496104_0010558 3300048907 Bacteria 8248
205 Ga0496104_0063324 3300048907 Bacteria 3507
206 Ga0496105_0001601 3300048908 Bacteria 16034
207 Ga0496105_0024674 3300048908 Bacteria 4886
208 Ga0496105_0088308 3300048908 Bacteria 2561
209 Ga0496106_0004769 3300048909 Bacteria 10023
210 Ga0496106_0014780 3300048909 Bacteria 5772
211 Ga0496106_0039828 3300048909 Bacteria 3519
212 Ga0496106_0045960 3300048909 Bacteria 3281
213 Ga0496107_0021901 3300048910 Bacteria 4516
214 Ga0496109_0006401 3300048912 Bacteria 9912
215 Ga0496109_0033157 3300048912 Bacteria 4645
216 Ga0496110_0017419 3300048913 Bacteria 6010
217 Ga0496110_0060174 3300048913 Bacteria 3349
218 Ga0496111_0001913 3300048914 Bacteria 12326
219 Ga0496111_0009631 3300048914 Bacteria 6453
220 Ga0496112_0018119 3300048915 Bacteria 6625
221 Ga0496117_0001690 3300048920 Bacteria 30620
222 Ga0496117_0010596 3300048920 Bacteria 8376
223 Ga0496117_0015472 3300048920 Bacteria 6503
224 Ga0496118_0000120 3300048921 Bacteria 142952
225 Ga0496118_0015336 3300048921 Bacteria 7099
226 Ga0496121_0000392 3300048924 Bacteria 88848
227 Ga0496125_0040210 3300048928 Bacteria 4013
228 Ga0496126_0000032 3300048929 Bacteria 372456
229 Ga0496126_0004667 3300048929 Bacteria 16201
230 Ga0496126_0008658 3300048929 Bacteria 10933
231 Ga0496126_0022561 3300048929 Bacteria 6121
232 Ga0496126_0030739 3300048929 Bacteria 5085
233 Ga0496126_0072153 3300048929 Bacteria 3072
234 Ga0495678_010446 3300049459 Bacteria 4513
235 Ga0501032_0009052 3300049569 Bacteria 7234
236 Ga0501034_0003661 3300049571 Bacteria 17379
237 Ga0501036_0035109 3300049572 Bacteria 4241
238 Ga0501038_0004791 3300049574 Bacteria 12574
239 Ga0501038_0009696 3300049574 Bacteria 8828
240 Ga0501039_0006979 3300049575 Bacteria 8602
241 Ga0501039_0015007 3300049575 Bacteria 5927
242 Ga0501042_0011912 3300049578 Bacteria 5877
243 Ga0501043_0052421 3300049579 Bacteria 3204
244 Ga0501046_0034543 3300049580 Bacteria 4079
245 Ga0501048_0004726 3300049582 Bacteria 10365
246 Ga0501048_0026086 3300049582 Bacteria 4256
247 Ga0501068_0030593 3300049584 Bacteria 3194
248 Ga0501069_0001760 3300049585 Bacteria 10809
249 Ga0501071_0002297 3300049587 Bacteria 11532
250 Ga0501074_0002882 3300049590 Bacteria 12058
251 Ga0501035_0070005 3300049822 Bacteria 3108
252 Ga0501045_0002774 3300049824 Bacteria 11965
253 nmdc:mga0yw44_17195_c1 3300050492 Bacteria 3930
254 nmdc:mga0yw44_28581_c1 3300050492 Bacteria 3209
255 nmdc:mga05p37_1435_c1 3300050507 Bacteria 27688
256 nmdc:mga05p37_5180_c1 3300050507 Bacteria 15295
257 nmdc:mga09592_16488_c1 3300050508 Bacteria 6044
258 nmdc:mga0qj67_19470_c1 3300050509 Bacteria 5185
259 nmdc:mga0qj67_4698_c1 3300050509 Bacteria 9916
260 nmdc:mga06r32_1010_c2 3300050510 Bacteria 22775
261 nmdc:mga06r32_61570_c1 3300050510 Bacteria 3613
262 nmdc:mga08y16_138346_c1 3300050511 Bacteria 2532
263 nmdc:mga0sz30_6981_c1 3300050516 Bacteria 4221
264 Ga0495601_0028600 3300053077 Bacteria 3453
265 Ga0495619_0013381 3300053085 Bacteria 5169
266 Ga0500646_0000224 3300053090 Bacteria 17049
267 Ga0500562_007395 3300053108 Bacteria 2770
268 Ga0500595_002463 3300053119 Bacteria 9175
269 Ga0500559_0014797 3300053136 Bacteria 3295
270 Ga0500590_008429 3300053148 Bacteria 5145
271 2566996942 2565956761 Bacteria 6601618
272 2644610870 2643221711 Bacteria 4865335
273 2792837802 2791355137 Bacteria 9654227
274 2795783065 2795385470 Bacteria 8317180
275 2808875380 2808606365 Bacteria 4301966
276 2812375717 2811994882 Bacteria 4688362
277 2828305993 2828305725 Bacteria 4916900
278 2899372322 2899370129 Bacteria 6781179
279 2904486009 2904483920 Bacteria 7545285
280 2904536544 2904535858 Bacteria 6308016
281 2904623642 2904615490 Bacteria 10047340
282 2904770633 2904765812 Bacteria 5369154
283 2904775613 2904770941 Bacteria 5580202
284 2908816707 2908811453 Bacteria 5478616
285 2919424794 2919420072 Bacteria 5390363
286 2919437336 2919432681 Bacteria 5390474
287 2919527355 2919527303 Bacteria 7718827
288 2922556536 2922554459 Bacteria 6683962
289 2928142625 2928142448 Bacteria 5288925
290 2929205192 2929199973 Bacteria 7260745
291 8055913372 8055909800 Bacteria 7278581
292 8056213087 8056207758 Bacteria 8639239
293 JGI24751J29686_10004025
294 JGI25156J39149_1002142
295 JGI25153J46596_10002966
296 Ga0055533_1000072
297 Ga0055532_1000013
298 Ga0055527_1000010
299 Ga0055535_1000010
300 Ga0055542_1000016
301 Ga0055529_1000012
302 Ga0070687_100003704
303 Ga0070661_100057932
304 Ga0070668_100024158
305 Ga0070671_100012122
306 Ga0070671_100023730
307 Ga0070714_100002944
308 Ga0070714_100037874
309 Ga0070713_100022077
310 Ga0070710_10010309
311 Ga0070710_10031557
312 Ga0070681_10002613
313 Ga0070699_100060676
314 Ga0070672_100004225
315 Ga0070702_100001213
316 Ga0068859_100024330
317 Ga0068864_100019093
318 Ga0068858_100009856
319 Ga0068862_100015217
320 Ga0081455_10010698
321 Ga0081455_10022331
322 Ga0081455_10051284
323 Ga0081538_10001953
324 Ga0081540_1002396
325 Ga0081540_1004700
326 Ga0081540_1022545
327 Ga0081539_10000423
328 Ga0070717_10002258
329 Ga0075365_10001784
330 Ga0075365_10016826
331 Ga0070715_10004339
332 Ga0070712_100018097
333 Ga0075428_100001479
334 Ga0075428_100061151
335 Ga0075430_100001668
336 Ga0075430_100044767
337 Ga0075431_100001451
338 Ga0075431_100005769
339 Ga0075431_100054294
340 Ga0075429_100024042
341 Ga0097620_100024330
342 Ga0111539_10018100
343 Ga0111539_10070208
344 Ga0105247_10004399
345 Ga0114129_10003043
346 Ga0114129_10003493
347 Ga0114129_10006042
348 Ga0114129_10032659
349 Ga0105248_10011788
350 Ga0105248_10056328
351 Ga0157374_10015406
352 Ga0163163_10076894
353 Ga0183361_10005
354 Ga0213872_10004628
355 Ga0209674_100011
356 Ga0209672_100002
357 Ga0209147_100003
358 Ga0207427_100472
359 Ga0209258_100042
360 Ga0209148_1000006
361 Ga0209759_1000051
362 Ga0209233_1000033
363 Ga0209455_1000003
364 Ga0209758_1000302
365 Ga0207692_10014909
366 Ga0207688_10000033
367 Ga0207643_10006216
368 Ga0207707_10031578
369 Ga0207693_10009432
370 Ga0207663_10012514
371 Ga0207662_10003898
372 Ga0207657_10054361
373 Ga0207650_10013240
374 Ga0207700_10019724
375 Ga0207664_10009504
376 Ga0207644_10043783
377 Ga0207706_10003167
378 Ga0207709_10031498
379 Ga0207670_10009701
380 Ga0207665_10000597
381 Ga0207691_10009323
382 Ga0207711_10003319
383 Ga0207711_10015857
384 Ga0207711_10069738
385 Ga0207689_10027065
386 Ga0207712_10043823
387 Ga0207639_10018940
388 Ga0207678_10014774
389 Ga0207708_10000124
390 Ga0207648_10001663
391 Ga0207676_10008256
392 Ga0207676_10027247
393 Ga0207683_10009531
394 Ga0207683_10085624
395 Ga0265338_10013422
396 Ga0265332_10001347
397 Ga0265325_10000599
398 Ga0265340_10001163
399 Ga0265339_10000143
400 Ga0265339_10006199
401 Ga0265313_10000514
402 Ga0265314_10004980
403 Ga0265314_10026238
404 Ga0265342_10000766
405 Ga0307410_10017441
406 Ga0307412_10000249
407 Ga0307412_10006006
408 Ga0307409_100000210
409 Ga0307416_100000328
410 Ga0307415_100001433
411 Ga0307415_100014852
412 Ga0373943_0012087
413 Ga0373931_0005417
414 Ga0373935_0010957
415 Ga0373927_0023062
416 Ga0373947_0037957
417 Ga0373925_0023856
418 Ga0373925_0032096
419 Ga0395900_0051076
420 Ga0395898_0039916
421 Ga0395901_0005351
422 Ga0436365_1805825
423 Ga0436360_0139436
424 Ga0436361_1189806
425 Ga0451577_0045351
426 Ga0495592_0012203
427 Ga0495592_0017649
428 Ga0495590_0000954
429 Ga0495591_000951
430 Ga0495629_0009789
431 Ga0495629_0025988
432 Ga0495629_0037336
433 Ga0495638_0001976
434 Ga0495651_0001374
435 Ga0495651_0006408
436 Ga0495653_0025830
437 Ga0495650_0001868
438 Ga0495650_0002308
439 Ga0495650_0028070
440 Ga0495580_0003226
441 Ga0495582_0002779
442 Ga0495582_0009531
443 Ga0495584_0030042
444 Ga0495596_0002001
445 Ga0495606_0005848
446 Ga0495606_0006822
447 Ga0495608_0003138
448 Ga0495608_0033804
449 Ga0495618_0001368
450 Ga0495618_0010094
451 Ga0495620_0005727
452 Ga0495630_0005349
453 Ga0495630_0006277
454 Ga0495630_0012382
455 Ga0495666_0003781
456 Ga0495665_0019427
457 Ga0495640_0023674
458 Ga0495587_0004045
459 Ga0495598_0001925
460 Ga0495668_0000305
461 Ga0495611_0004443
462 Ga0495625_0022239
463 Ga0495661_0017772
464 Ga0495661_0030074
465 Ga0495588_0026960
466 Ga0495623_0002140
467 Ga0495646_0009189
468 Ga0495646_0014464
469 Ga0495647_0005607
470 Ga0495613_0015302
471 Ga0495624_0000829
472 Ga0495589_0003553
473 Ga0495600_0000472
474 Ga0495600_0000688
475 Ga0495581_0009530
476 Ga0495604_0000684
477 Ga0495674_0001033
478 Ga0495672_0023963
479 Ga0495680_0016509
480 Ga0495683_0004419
481 Ga0495683_0009639
482 Ga0495687_000125
483 Ga0495675_0001021
484 Ga0495679_000459
485 Ga0495593_0004521
486 Ga0495593_0017886
487 Ga0495602_0004142
488 Ga0495614_0003344
489 Ga0495614_0007570
490 Ga0496100_0003947
491 Ga0496101_0008106
492 Ga0496102_0012676
493 Ga0496103_0018516
494 Ga0496104_0001327
495 Ga0496104_0004650
496 Ga0496104_0010558
497 Ga0496104_0063324
498 Ga0496105_0001601
499 Ga0496105_0024674
500 Ga0496105_0088308
501 Ga0496106_0004769
502 Ga0496106_0014780
503 Ga0496106_0039828
504 Ga0496106_0045960
505 Ga0496107_0021901
506 Ga0496109_0006401
507 Ga0496109_0033157
508 Ga0496110_0017419
509 Ga0496110_0060174
510 Ga0496111_0001913
511 Ga0496111_0009631
512 Ga0496112_0018119
513 Ga0496117_0001690
514 Ga0496117_0010596
515 Ga0496117_0015472
516 Ga0496118_0000120
517 Ga0496118_0015336
518 Ga0496121_0000392
519 Ga0496125_0040210
520 Ga0496126_0000032
521 Ga0496126_0004667
522 Ga0496126_0008658
523 Ga0496126_0022561
524 Ga0496126_0030739
525 Ga0496126_0072153
526 Ga0495678_010446
527 Ga0501032_0009052
528 Ga0501034_0003661
529 Ga0501036_0035109
530 Ga0501038_0004791
531 Ga0501038_0009696
532 Ga0501039_0006979
533 Ga0501039_0015007
534 Ga0501042_0011912
535 Ga0501043_0052421
536 Ga0501046_0034543
537 Ga0501048_0004726
538 Ga0501048_0026086
539 Ga0501068_0030593
540 Ga0501069_0001760
541 Ga0501071_0002297
542 Ga0501074_0002882
543 Ga0501035_0070005
544 Ga0501045_0002774
545 nmdc:mga0yw44_17195_c1
546 nmdc:mga0yw44_28581_c1
547 nmdc:mga05p37_1435_c1
548 nmdc:mga05p37_5180_c1
549 nmdc:mga09592_16488_c1
550 nmdc:mga0qj67_19470_c1
551 nmdc:mga0qj67_4698_c1
552 nmdc:mga06r32_1010_c2
553 nmdc:mga06r32_61570_c1
554 nmdc:mga08y16_138346_c1
555 nmdc:mga0sz30_6981_c1
556 Ga0495601_0028600
557 Ga0495619_0013381
558 Ga0500646_0000224
559 Ga0500562_007395
560 Ga0500595_002463
561 Ga0500559_0014797
562 Ga0500590_008429
563 2566996942
564 2644610870
565 2792837802
566 2795783065
567 2808875380
568 2812375717
569 2828305993
570 2899372322
571 2904486009
572 2904536544
573 2904623642
574 2904770633
575 2904775613
576 2908816707
577 2919424794
578 2919437336
579 2919527355
580 2922556536
581 2928142625
582 2929205192
583 8055913372
584 8056213087

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02738

MoCoBD_1

Molybdopterin cofactor-binding domain

177

428

0.96

PF20256

MoCoBD_2

Molybdopterin cofactor-binding domain

461

764

0.92

PF01315

Ald_Xan_dh_C

Aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead domain

44

162

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
4zoh-assembly1.cif.gz_A crystal structure of glyceraldehyde oxidoreductase 0.9268 5 766
3hrd-assembly1.cif.gz_E crystal structure of nicotinate dehydrogenase 0.9248 7 435
4zoh-assembly1.cif.gz_A crystal structure of glyceraldehyde oxidoreductase 0.9243 5 766
1t3q-assembly1.cif.gz_E crystal structure of quinoline 2-oxidoreductase from pseudomonas putida 86 0.9114 5 771
1n5w-assembly1.cif.gz_B crystal structure of the cu,mo-co dehydrogenase (codh); oxidized form 0.9095 6 775
ID Description Score Start End Superfamily
1t3qB03 Alpha Beta;2-Layer Sandwich;Aldehyde Oxidoreductase; domain 4;Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.9339 194 288 3.30.365.10
1n5wB05 Alpha Beta;2-Layer Sandwich;Aldehyde Oxidoreductase; domain 4;Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.9294 196 282 3.30.365.10
1t3qB04 Alpha Beta;2-Layer Sandwich;Aldehyde Oxidoreductase; domain 4;Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.9277 422 771 3.30.365.10
1t3qB04 Alpha Beta;2-Layer Sandwich;Aldehyde Oxidoreductase; domain 4;Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.914 422 771 3.30.365.10
4zohA03 Alpha Beta;2-Layer Sandwich;Aldehyde Oxidoreductase; domain 4;Aldehyde oxidase/xanthine dehydrogenase, molybdopterin binding domain 0.9101 194 284 3.30.365.10
ID Description Score Start End GO Terms
AF-A0A2V7IAI4-F1-model_v4 Xanthine dehydrogenase 0.9804 1 692 GO:0005506
GO:0016491
AF-A0A2V7IAI4-F1-model_v4 Xanthine dehydrogenase 0.979 1 692 GO:0005506
GO:0016491
AF-A0A2V6U9Z0-F1-model_v4 Xanthine dehydrogenase 0.975 7 403 GO:0005506
GO:0016491
AF-A0A2V6ZY62-F1-model_v4 Aldehyde oxidase/xanthine dehydrogenase a/b hammerhead domain-containing protein 0.9743 1 735 GO:0005506
GO:0016491
AF-A0A2V7SGE1-F1-model_v4 Xanthine dehydrogenase 0.9731 26 772 GO:0005506
GO:0016491

Map