F390630

General Info

Members Datasets Scaffolds Average Seq Length
291 199 582 286

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2515154088|2515496046
Length 317
Sequence PEVETVRQGLAQWVTGRRIAEVEVRHPRAIRRHPAGAAHFADVLVGTTVRDVRRRGKYLWLPLDSGDAVIGHLGMSGQLLLQPGAAPDEAHLRVRFRFADDGPELRFVDQRTFGGLSVSAGGAEMPTEIAHIARDPLDPEFSEAAFVAALRRRRTEVKRALLDQTLLSGVGNIYADEALWRARLHGARPADGLTGPAALRLLGHVRDVLGEAIKEGGTSFDALYVNVNGESGYFDRALNVYGRADQPCRRCGTPRGVHEPVVVQLPALPAAAPQGAPGQRLKPATGCTAPRPRGRGGRGLWRRATSRRVGMAFHLLG

Samples

Sample ID Description Type Environment
1 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
2 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
3 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
6 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
7 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
8 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
9 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
10 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
11 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
12 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
13 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
14 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
15 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
16 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
17 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
18 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
19 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
20 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
21 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
22 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
23 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
24 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
25 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
26 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
27 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
28 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
29 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
30 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
31 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
32 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
33 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
34 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
35 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
36 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
37 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
38 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
39 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
40 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
41 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
42 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
43 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
44 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
47 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
48 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
62 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
70 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
71 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
72 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
73 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
74 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
75 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
76 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
77 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
78 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
79 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
80 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
81 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
82 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
83 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
84 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
85 3300035242 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_11 Metagenome Rhizosphere
86 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
87 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
88 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
89 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
90 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
91 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
92 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
93 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
94 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
95 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
96 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
97 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
98 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
99 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
100 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
101 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
102 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
103 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
104 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
105 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
106 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
107 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
108 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
109 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
110 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
111 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
112 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
113 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
114 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
115 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
116 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
117 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
118 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
119 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
120 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
121 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
122 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
124 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
125 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
126 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
127 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
131 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
132 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
133 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
134 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
135 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
136 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
137 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
138 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
139 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
140 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
141 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
142 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
143 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
144 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
145 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
146 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
147 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
148 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
149 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
150 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
151 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
152 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
153 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
154 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
155 2501939600 Micromonospora sp. L5 Isolate Unclassified
156 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
157 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
158 2515154155 Actinopolymorpha alba DSM 45243 Isolate Rhizosphere
159 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
160 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
161 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
162 2643221697 Aeromicrobium sp. Root495 Isolate Unclassified
163 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
164 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
165 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
166 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
167 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
168 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
169 2855683550 Micromonospora sp. RP3T Isolate Unclassified
170 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
171 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
172 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
173 2858868258 Micromonospora sp. MH33 Isolate Unclassified
174 2858882152 Micromonospora noduli MED15 Isolate Nodule
175 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
176 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
177 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
178 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
179 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
180 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
181 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
182 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
183 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
184 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
185 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
186 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
187 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
188 2902582711 Micromonospora sp. AP08 Isolate Unclassified
189 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
190 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
191 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
192 649633069 Micromonospora sp. L5 Isolate Unclassified
193 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
194 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
195 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
196 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
197 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
198 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
199 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 84.19
Metatranscriptomes 0
Isolates 15.81

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.34
Nodule 2.06
Rhizoplane 9.97
Rhizosphere 76.29
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24735J21928_10002537 3300002067 Bacteria 6312
2 Ga0070658_10018237 3300005327 Bacteria 5616
3 Ga0070658_10019857 3300005327 Bacteria 5382
4 Ga0070683_100007233 3300005329 Bacteria 9367
5 Ga0070683_100061961 3300005329 Bacteria 3477
6 Ga0070683_100340639 3300005329 Bacteria 1428
7 Ga0070682_100114527 3300005337 Bacteria 1802
8 Ga0070660_100018156 3300005339 Bacteria 5134
9 Ga0070660_100080715 3300005339 Bacteria 2553
10 Ga0070667_100301902 3300005367 Bacteria 1442
11 Ga0070700_100090062 3300005441 Bacteria 2000
12 Ga0070707_100105891 3300005468 Bacteria 2727
13 Ga0070679_100026806 3300005530 Bacteria 5667
14 Ga0070679_100330032 3300005530 Bacteria 1474
15 Ga0070684_100019814 3300005535 Bacteria 5571
16 Ga0070684_100019856 3300005535 Bacteria 5567
17 Ga0070684_100020067 3300005535 Bacteria 5542
18 Ga0070684_100229510 3300005535 Bacteria 1695
19 Ga0070684_100488808 3300005535 Bacteria 1140
20 Ga0070665_100008262 3300005548 Bacteria 10526
21 Ga0068855_100015645 3300005563 Bacteria 9127
22 Ga0068855_100096432 3300005563 Bacteria 3407
23 Ga0068855_100519523 3300005563 Bacteria 1292
24 Ga0070664_100025259 3300005564 Bacteria 4923
25 Ga0068857_100043905 3300005577 Bacteria 3965
26 Ga0068857_100091905 3300005577 Bacteria 2717
27 Ga0068857_100228072 3300005577 Bacteria 1703
28 Ga0068856_100112710 3300005614 Bacteria 2718
29 Ga0068859_100159855 3300005617 Bacteria 2332
30 Ga0068864_100043146 3300005618 Bacteria 3861
31 Ga0068864_100132955 3300005618 Bacteria 2237
32 Ga0068863_100057901 3300005841 Bacteria 3668
33 Ga0068860_100038516 3300005843 Bacteria 4574
34 Ga0081539_10000613 3300005985 Bacteria 72150
35 Ga0081539_10001159 3300005985 Bacteria 47725
36 Ga0081539_10002254 3300005985 Bacteria 28046
37 Ga0081539_10003630 3300005985 Bacteria 18588
38 Ga0070712_100200281 3300006175 Bacteria 1568
39 Ga0075428_100000717 3300006844 Bacteria 34354
40 Ga0075430_100001200 3300006846 Bacteria 20794
41 Ga0075430_100001505 3300006846 Bacteria 19030
42 Ga0075430_100010465 3300006846 Bacteria 7854
43 Ga0075431_100001109 3300006847 Bacteria 24130
44 Ga0075431_100003554 3300006847 Bacteria 15089
45 Ga0075431_100040518 3300006847 Bacteria 4801
46 Ga0075429_100006319 3300006880 Bacteria 10259
47 Ga0075429_100090380 3300006880 Bacteria 2670
48 Ga0068865_100016867 3300006881 Bacteria 4685
49 Ga0097620_100159865 3300006931 Bacteria 2332
50 Ga0099794_10007424 3300007265 Bacteria 4505
51 Ga0105240_10002176 3300009093 Bacteria 31973
52 Ga0105245_10021266 3300009098 Bacteria 5688
53 Ga0114129_10000007 3300009147 Bacteria 156645
54 Ga0114129_10000082 3300009147 Bacteria 88174
55 Ga0114129_10003107 3300009147 Bacteria 23285
56 Ga0114129_10050600 3300009147 Bacteria 5835
57 Ga0114129_10132245 3300009147 Bacteria 3425
58 Ga0114129_10368205 3300009147 Bacteria 1900
59 Ga0105248_10102258 3300009177 Bacteria 3230
60 Ga0105238_10185284 3300009551 Bacteria 2058
61 Ga0105239_10022564 3300010375 Bacteria 6940
62 Ga0105246_10000453 3300011119 Bacteria 22003
63 Ga0157370_10009115 3300013104 Bacteria 10643
64 Ga0157369_10003761 3300013105 Bacteria 18032
65 Ga0157369_10025676 3300013105 Bacteria 6537
66 Ga0157369_10734651 3300013105 Bacteria 1016
67 Ga0163162_10295584 3300013306 Bacteria 1751
68 Ga0157372_10036993 3300013307 Bacteria 5381
69 Ga0157375_10019157 3300013308 Bacteria 6217
70 Ga0157375_10135837 3300013308 Bacteria 2583
71 Ga0163163_10063559 3300014325 Bacteria 3660
72 Ga0163163_10098362 3300014325 Bacteria 2947
73 Ga0157377_10087314 3300014745 Bacteria 1835
74 Ga0157379_10095635 3300014968 Bacteria 2665
75 Ga0207688_10010145 3300025901 Bacteria 5124
76 Ga0207647_10045815 3300025904 Bacteria 2727
77 Ga0207705_10006953 3300025909 Bacteria 8359
78 Ga0207705_10083204 3300025909 Bacteria 2334
79 Ga0207705_10167330 3300025909 Bacteria 1654
80 Ga0207695_10317073 3300025913 Bacteria 1449
81 Ga0207693_10127056 3300025915 Bacteria 2004
82 Ga0207657_10037271 3300025919 Bacteria 4343
83 Ga0207652_10059300 3300025921 Bacteria 3299
84 Ga0207646_10051937 3300025922 Bacteria 3667
85 Ga0207646_10481377 3300025922 Bacteria 1119
86 Ga0207681_10327683 3300025923 Bacteria 1220
87 Ga0207694_10436075 3300025924 Bacteria 1092
88 Ga0207687_10012444 3300025927 Bacteria 5558
89 Ga0207706_10127688 3300025933 Bacteria 2236
90 Ga0207709_10424360 3300025935 Bacteria 1022
91 Ga0207704_10083240 3300025938 Bacteria 2076
92 Ga0207691_10169593 3300025940 Bacteria 1912
93 Ga0207711_10021176 3300025941 Bacteria 5430
94 Ga0207661_10006819 3300025944 Bacteria 8094
95 Ga0207661_10060895 3300025944 Bacteria 3048
96 Ga0207667_10079293 3300025949 Bacteria 3403
97 Ga0207667_10402833 3300025949 Bacteria 1393
98 Ga0207677_10064323 3300026023 Bacteria 2554
99 Ga0207702_10191532 3300026078 Bacteria 1890
100 Ga0207641_10023737 3300026088 Bacteria 5054
101 Ga0207676_10172558 3300026095 Bacteria 1885
102 Ga0207676_10222538 3300026095 Bacteria 1682
103 Ga0207674_10034547 3300026116 Bacteria 5283
104 Ga0207674_10063092 3300026116 Bacteria 3741
105 Ga0268266_10005397 3300028379 Bacteria 11934
106 Ga0268264_10020447 3300028381 Bacteria 5408
107 Ga0307515_10000045 3300028794 Bacteria 301029
108 Ga0307408_100101291 3300031548 Bacteria 2195
109 Ga0307508_10000774 3300031616 Bacteria 37828
110 Ga0307508_10021061 3300031616 Bacteria 5928
111 Ga0307514_10219786 3300031649 Bacteria 1167
112 Ga0307405_10146844 3300031731 Bacteria 1653
113 Ga0307405_10222261 3300031731 Bacteria 1386
114 Ga0307410_10146418 3300031852 Bacteria 1753
115 Ga0307410_10387154 3300031852 Bacteria 1126
116 Ga0326468_10000730 3300031889 Bacteria 3317
117 Ga0307406_10013260 3300031901 Bacteria 4718
118 Ga0307406_10038380 3300031901 Bacteria 2964
119 Ga0307406_10140281 3300031901 Bacteria 1710
120 Ga0307407_10104938 3300031903 Bacteria 1762
121 Ga0307407_10127702 3300031903 Bacteria 1622
122 Ga0307407_10147705 3300031903 Bacteria 1524
123 Ga0307412_10289110 3300031911 Bacteria 1290
124 Ga0307409_100006161 3300031995 Bacteria 7015
125 Ga0307409_100019904 3300031995 Bacteria 4558
126 Ga0307416_100000814 3300032002 Bacteria 16383
127 Ga0307416_100176858 3300032002 Bacteria 1995
128 Ga0307414_10139644 3300032004 Bacteria 1895
129 Ga0307415_100000231 3300032126 Bacteria 24459
130 Ga0307415_100347270 3300032126 Bacteria 1247
131 Ga0373951_0000004 3300035091 Bacteria 95240
132 Ga0373942_0001073 3300035207 Bacteria 7335
133 Ga0373962_0006808 3300035242 Bacteria 2779
134 Ga0373935_0017154 3300035692 Bacteria 4388
135 Ga0395899_0017593 3300037312 Bacteria 5445
136 Ga0395899_0032344 3300037312 Bacteria 3929
137 Ga0395900_0026948 3300037418 Bacteria 5883
138 Ga0395900_0066180 3300037418 Bacteria 3714
139 Ga0395900_0098183 3300037418 Bacteria 3009
140 Ga0395898_0019010 3300037466 Bacteria 6997
141 Ga0395898_0184182 3300037466 Bacteria 1995
142 Ga0395905_0036381 3300037471 Bacteria 4623
143 Ga0395901_0044637 3300038443 Bacteria 4597
144 Ga0395901_0164506 3300038443 Bacteria 2329
145 Ga0439463_013140 3300042016 Bacteria 2036
146 Ga0466969_0121690 3300044656 Bacteria 1214
147 Ga0466966_0099584 3300044684 Bacteria 1798
148 Ga0466961_0176704 3300044693 Bacteria 1326
149 Ga0466963_0026778 3300044694 Bacteria 3689
150 Ga0466963_0214309 3300044694 Bacteria 1348
151 Ga0466964_0013732 3300044706 Bacteria 3074
152 Ga0466964_0081478 3300044706 Bacteria 1390
153 Ga0466960_0049787 3300044901 Bacteria 2018
154 Ga0466960_0053183 3300044901 Bacteria 1961
155 Ga0466958_0024725 3300045836 Bacteria 3535
156 Ga0466967_0020408 3300045976 Bacteria 5355
157 Ga0466967_0077725 3300045976 Bacteria 2988
158 Ga0466967_0325861 3300045976 Bacteria 1482
159 Ga0495629_0379452 3300046459 Bacteria 962
160 Ga0495668_0000566 3300046616 Bacteria 45529
161 Ga0495625_0004758 3300046660 Bacteria 12700
162 Ga0495600_0061548 3300046809 Bacteria 2452
163 Ga0495626_0000129 3300048091 Bacteria 95400
164 Ga0496100_0119672 3300048903 Bacteria 1840
165 Ga0496101_0106065 3300048904 Bacteria 2109
166 Ga0496102_0022312 3300048905 Bacteria 5609
167 Ga0496103_0100920 3300048906 Bacteria 1826
168 Ga0496104_0002561 3300048907 Bacteria 15664
169 Ga0496104_0008137 3300048907 Bacteria 9303
170 Ga0496105_0013217 3300048908 Bacteria 6551
171 Ga0496105_0132263 3300048908 Bacteria 2056
172 Ga0496108_0097492 3300048911 Bacteria 2505
173 Ga0496108_0150040 3300048911 Bacteria 2011
174 Ga0496108_0204667 3300048911 Bacteria 1713
175 Ga0496109_0007982 3300048912 Bacteria 8972
176 Ga0496109_0019112 3300048912 Bacteria 6035
177 Ga0496109_0033241 3300048912 Bacteria 4639
178 Ga0496109_0049406 3300048912 Bacteria 3829
179 Ga0496109_0311694 3300048912 Bacteria 1485
180 Ga0496110_0017732 3300048913 Bacteria 5957
181 Ga0496110_0035631 3300048913 Bacteria 4318
182 Ga0496110_0122722 3300048913 Bacteria 2342
183 Ga0496110_0588953 3300048913 Bacteria 1009
184 Ga0496111_0007474 3300048914 Bacteria 7168
185 Ga0496111_0050756 3300048914 Bacteria 2993
186 Ga0496112_0039481 3300048915 Bacteria 4613
187 Ga0496112_0362260 3300048915 Bacteria 1392
188 Ga0496112_0511383 3300048915 Bacteria 1136
189 Ga0496113_0002258 3300048916 Bacteria 11107
190 Ga0496114_0175537 3300048917 Bacteria 1869
191 Ga0496114_0463584 3300048917 Bacteria 1121
192 Ga0496115_0002010 3300048918 Bacteria 14538
193 Ga0501031_0041227 3300049568 Bacteria 3014
194 Ga0501032_0075920 3300049569 Bacteria 2238
195 Ga0501032_0295043 3300049569 Bacteria 1048
196 Ga0501033_0090086 3300049570 Bacteria 2244
197 Ga0501034_0020991 3300049571 Bacteria 6666
198 Ga0501038_0066728 3300049574 Bacteria 3063
199 Ga0501038_0425577 3300049574 Bacteria 1024
200 Ga0501039_0035407 3300049575 Bacteria 3852
201 Ga0501040_0014667 3300049576 Bacteria 5168
202 Ga0501040_0082087 3300049576 Bacteria 2234
203 Ga0501041_0017656 3300049577 Bacteria 4246
204 Ga0501042_0004521 3300049578 Bacteria 8875
205 Ga0501042_0142358 3300049578 Bacteria 1729
206 Ga0501043_0033648 3300049579 Bacteria 4033
207 Ga0501067_0034456 3300049583 Bacteria 2809
208 Ga0501069_0209921 3300049585 Bacteria 1130
209 Ga0501070_0051450 3300049586 Bacteria 3420
210 Ga0501070_0129521 3300049586 Bacteria 2085
211 Ga0501071_0021765 3300049587 Bacteria 4469
212 Ga0501072_0015206 3300049588 Bacteria 5900
213 Ga0501073_0095924 3300049589 Bacteria 2060
214 Ga0501074_0044508 3300049590 Bacteria 3213
215 Ga0501074_0087322 3300049590 Bacteria 2233
216 Ga0501075_0015064 3300049591 Bacteria 5547
217 Ga0501076_0090079 3300049592 Bacteria 2466
218 Ga0501077_0005811 3300049593 Bacteria 7516
219 Ga0501077_0044816 3300049593 Bacteria 2809
220 Ga0501079_0119456 3300049741 Bacteria 2049
221 Ga0501079_0435510 3300049741 Bacteria 1029
222 Ga0501080_0002164 3300049742 Bacteria 17076
223 Ga0501083_0202220 3300049744 Bacteria 1295
224 Ga0501035_0176665 3300049822 Bacteria 1842
225 Ga0501045_0010373 3300049824 Bacteria 6524
226 nmdc:mga05p37_126_c1 3300050507 Bacteria 69639
227 nmdc:mga05p37_22275_c1 3300050507 Bacteria 7683
228 nmdc:mga05p37_43735_c1 3300050507 Bacteria 5511
229 nmdc:mga05p37_806_c1 3300050507 Bacteria 34541
230 nmdc:mga09592_12_c1 3300050508 Bacteria 104148
231 nmdc:mga09592_25853_c1 3300050508 Bacteria 4862
232 nmdc:mga0qj67_225_c1 3300050509 Bacteria 38360
233 nmdc:mga0qj67_6_c2 3300050509 Bacteria 123818
234 nmdc:mga06r32_10_c1 3300050510 Bacteria 113242
235 nmdc:mga06r32_25079_c1 3300050510 Bacteria 5541
236 nmdc:mga06r32_33970_c1 3300050510 Bacteria 4807
237 nmdc:mga06r32_379493_c1 3300050510 Bacteria 1396
238 nmdc:mga06r32_578302_c1 3300050510 Bacteria 1096
239 Ga0495619_0036517 3300053085 Bacteria 3200
240 Ga0500630_126050 3300053159 Bacteria 1126
241 Ga0501084_0059450 3300054114 Bacteria 3199
242 Ga0501084_0218879 3300054114 Bacteria 1607
243 Ga0501082_0045749 3300060353 Bacteria 3774
244 Ga0501082_0377688 3300060353 Bacteria 1236
245 Ga0530510_0023887 3300061734 Bacteria 4359
246 2515496046 2515154088 Bacteria 5526283
247 2501945337 2501939600 Bacteria 6907073
248 2515719818 2515154129 Bacteria 5584369
249 2515757884 2515154137 Bacteria 5711575
250 2515853627 2515154155 Bacteria 7985436
251 2516082368 2515154202 Bacteria 5471270
252 2516090310 2515154203 Bacteria 5458536
253 2623587188 2622736626 Bacteria 7181580
254 2644537060 2643221697 Bacteria 3575694
255 2676486408 2675903059 Bacteria 8644972
256 2772642606 2772190715 Bacteria 6959372
257 2831937857 2831935698 Bacteria 5963223
258 2832006892 2832004796 Bacteria 6538017
259 2855671095 2855670206 Bacteria 7120389
260 2855682292 2855676851 Bacteria 7063653
261 2855689479 2855683550 Bacteria 7134265
262 2856861023 2856858025 Bacteria 7255264
263 2857294526 2857288857 Bacteria 7189066
264 2858850478 2858848962 Bacteria 6963058
265 2858871562 2858868258 Bacteria 7683772
266 2858884048 2858882152 Bacteria 7230291
267 2858889798 2858888857 Bacteria 7060307
268 2858900649 2858895516 Bacteria 7378898
269 2858903748 2858902515 Bacteria 7086037
270 2866068951 2866065130 Bacteria 6518152
271 2867304892 2867302475 Bacteria 7087181
272 2867315680 2867312974 Bacteria 7058875
273 2867324354 2867319477 Bacteria 7069771
274 2867507705 2867507094 Bacteria 6506033
275 2869050611 2869048445 Bacteria 6875584
276 2869066692 2869061728 Bacteria 7112407
277 2869073923 2869068681 Bacteria 7205615
278 2880493088 2880489317 Bacteria 7096270
279 2880499221 2880495981 Bacteria 7340502
280 2902587038 2902582711 Bacteria 6187705
281 2929221208 2929219909 Bacteria 6984360
282 2929227823 2929226422 Bacteria 7248583
283 2996222743 2996221748 Bacteria 6799777
284 649811774 649633069 Bacteria 6962533
285 8001781923 8001781756 Bacteria 9586736
286 8003862777 8003856774 Bacteria 7675274
287 8003875903 8003870546 Bacteria 7396674
288 8054709105 8054704163 Bacteria 7247792
289 8054731426 8054727385 Bacteria 7558670
290 8054736235 8054734606 Bacteria 6947278
291 8055415832 8055412473 Bacteria 6257500
292 JGI24735J21928_10002537
293 Ga0070658_10018237
294 Ga0070658_10019857
295 Ga0070683_100007233
296 Ga0070683_100061961
297 Ga0070683_100340639
298 Ga0070682_100114527
299 Ga0070660_100018156
300 Ga0070660_100080715
301 Ga0070667_100301902
302 Ga0070700_100090062
303 Ga0070707_100105891
304 Ga0070679_100026806
305 Ga0070679_100330032
306 Ga0070684_100019814
307 Ga0070684_100019856
308 Ga0070684_100020067
309 Ga0070684_100229510
310 Ga0070684_100488808
311 Ga0070665_100008262
312 Ga0068855_100015645
313 Ga0068855_100096432
314 Ga0068855_100519523
315 Ga0070664_100025259
316 Ga0068857_100043905
317 Ga0068857_100091905
318 Ga0068857_100228072
319 Ga0068856_100112710
320 Ga0068859_100159855
321 Ga0068864_100043146
322 Ga0068864_100132955
323 Ga0068863_100057901
324 Ga0068860_100038516
325 Ga0081539_10000613
326 Ga0081539_10001159
327 Ga0081539_10002254
328 Ga0081539_10003630
329 Ga0070712_100200281
330 Ga0075428_100000717
331 Ga0075430_100001200
332 Ga0075430_100001505
333 Ga0075430_100010465
334 Ga0075431_100001109
335 Ga0075431_100003554
336 Ga0075431_100040518
337 Ga0075429_100006319
338 Ga0075429_100090380
339 Ga0068865_100016867
340 Ga0097620_100159865
341 Ga0099794_10007424
342 Ga0105240_10002176
343 Ga0105245_10021266
344 Ga0114129_10000007
345 Ga0114129_10000082
346 Ga0114129_10003107
347 Ga0114129_10050600
348 Ga0114129_10132245
349 Ga0114129_10368205
350 Ga0105248_10102258
351 Ga0105238_10185284
352 Ga0105239_10022564
353 Ga0105246_10000453
354 Ga0157370_10009115
355 Ga0157369_10003761
356 Ga0157369_10025676
357 Ga0157369_10734651
358 Ga0163162_10295584
359 Ga0157372_10036993
360 Ga0157375_10019157
361 Ga0157375_10135837
362 Ga0163163_10063559
363 Ga0163163_10098362
364 Ga0157377_10087314
365 Ga0157379_10095635
366 Ga0207688_10010145
367 Ga0207647_10045815
368 Ga0207705_10006953
369 Ga0207705_10083204
370 Ga0207705_10167330
371 Ga0207695_10317073
372 Ga0207693_10127056
373 Ga0207657_10037271
374 Ga0207652_10059300
375 Ga0207646_10051937
376 Ga0207646_10481377
377 Ga0207681_10327683
378 Ga0207694_10436075
379 Ga0207687_10012444
380 Ga0207706_10127688
381 Ga0207709_10424360
382 Ga0207704_10083240
383 Ga0207691_10169593
384 Ga0207711_10021176
385 Ga0207661_10006819
386 Ga0207661_10060895
387 Ga0207667_10079293
388 Ga0207667_10402833
389 Ga0207677_10064323
390 Ga0207702_10191532
391 Ga0207641_10023737
392 Ga0207676_10172558
393 Ga0207676_10222538
394 Ga0207674_10034547
395 Ga0207674_10063092
396 Ga0268266_10005397
397 Ga0268264_10020447
398 Ga0307515_10000045
399 Ga0307408_100101291
400 Ga0307508_10000774
401 Ga0307508_10021061
402 Ga0307514_10219786
403 Ga0307405_10146844
404 Ga0307405_10222261
405 Ga0307410_10146418
406 Ga0307410_10387154
407 Ga0326468_10000730
408 Ga0307406_10013260
409 Ga0307406_10038380
410 Ga0307406_10140281
411 Ga0307407_10104938
412 Ga0307407_10127702
413 Ga0307407_10147705
414 Ga0307412_10289110
415 Ga0307409_100006161
416 Ga0307409_100019904
417 Ga0307416_100000814
418 Ga0307416_100176858
419 Ga0307414_10139644
420 Ga0307415_100000231
421 Ga0307415_100347270
422 Ga0373951_0000004
423 Ga0373942_0001073
424 Ga0373962_0006808
425 Ga0373935_0017154
426 Ga0395899_0017593
427 Ga0395899_0032344
428 Ga0395900_0026948
429 Ga0395900_0066180
430 Ga0395900_0098183
431 Ga0395898_0019010
432 Ga0395898_0184182
433 Ga0395905_0036381
434 Ga0395901_0044637
435 Ga0395901_0164506
436 Ga0439463_013140
437 Ga0466969_0121690
438 Ga0466966_0099584
439 Ga0466961_0176704
440 Ga0466963_0026778
441 Ga0466963_0214309
442 Ga0466964_0013732
443 Ga0466964_0081478
444 Ga0466960_0049787
445 Ga0466960_0053183
446 Ga0466958_0024725
447 Ga0466967_0020408
448 Ga0466967_0077725
449 Ga0466967_0325861
450 Ga0495629_0379452
451 Ga0495668_0000566
452 Ga0495625_0004758
453 Ga0495600_0061548
454 Ga0495626_0000129
455 Ga0496100_0119672
456 Ga0496101_0106065
457 Ga0496102_0022312
458 Ga0496103_0100920
459 Ga0496104_0002561
460 Ga0496104_0008137
461 Ga0496105_0013217
462 Ga0496105_0132263
463 Ga0496108_0097492
464 Ga0496108_0150040
465 Ga0496108_0204667
466 Ga0496109_0007982
467 Ga0496109_0019112
468 Ga0496109_0033241
469 Ga0496109_0049406
470 Ga0496109_0311694
471 Ga0496110_0017732
472 Ga0496110_0035631
473 Ga0496110_0122722
474 Ga0496110_0588953
475 Ga0496111_0007474
476 Ga0496111_0050756
477 Ga0496112_0039481
478 Ga0496112_0362260
479 Ga0496112_0511383
480 Ga0496113_0002258
481 Ga0496114_0175537
482 Ga0496114_0463584
483 Ga0496115_0002010
484 Ga0501031_0041227
485 Ga0501032_0075920
486 Ga0501032_0295043
487 Ga0501033_0090086
488 Ga0501034_0020991
489 Ga0501038_0066728
490 Ga0501038_0425577
491 Ga0501039_0035407
492 Ga0501040_0014667
493 Ga0501040_0082087
494 Ga0501041_0017656
495 Ga0501042_0004521
496 Ga0501042_0142358
497 Ga0501043_0033648
498 Ga0501067_0034456
499 Ga0501069_0209921
500 Ga0501070_0051450
501 Ga0501070_0129521
502 Ga0501071_0021765
503 Ga0501072_0015206
504 Ga0501073_0095924
505 Ga0501074_0044508
506 Ga0501074_0087322
507 Ga0501075_0015064
508 Ga0501076_0090079
509 Ga0501077_0005811
510 Ga0501077_0044816
511 Ga0501079_0119456
512 Ga0501079_0435510
513 Ga0501080_0002164
514 Ga0501083_0202220
515 Ga0501035_0176665
516 Ga0501045_0010373
517 nmdc:mga05p37_126_c1
518 nmdc:mga05p37_22275_c1
519 nmdc:mga05p37_43735_c1
520 nmdc:mga05p37_806_c1
521 nmdc:mga09592_12_c1
522 nmdc:mga09592_25853_c1
523 nmdc:mga0qj67_225_c1
524 nmdc:mga0qj67_6_c2
525 nmdc:mga06r32_10_c1
526 nmdc:mga06r32_25079_c1
527 nmdc:mga06r32_33970_c1
528 nmdc:mga06r32_379493_c1
529 nmdc:mga06r32_578302_c1
530 Ga0495619_0036517
531 Ga0500630_126050
532 Ga0501084_0059450
533 Ga0501084_0218879
534 Ga0501082_0045749
535 Ga0501082_0377688
536 Ga0530510_0023887
537 2515496046
538 2501945337
539 2515719818
540 2515757884
541 2515853627
542 2516082368
543 2516090310
544 2623587188
545 2644537060
546 2676486408
547 2772642606
548 2831937857
549 2832006892
550 2855671095
551 2855682292
552 2855689479
553 2856861023
554 2857294526
555 2858850478
556 2858871562
557 2858884048
558 2858889798
559 2858900649
560 2858903748
561 2866068951
562 2867304892
563 2867315680
564 2867324354
565 2867507705
566 2869050611
567 2869066692
568 2869073923
569 2880493088
570 2880499221
571 2902587038
572 2929221208
573 2929227823
574 2996222743
575 649811774
576 8001781923
577 8003862777
578 8003875903
579 8054709105
580 8054731426
581 8054736235
582 8055415832

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF06831

H2TH

Formamidopyrimidine-DNA glycosylase H2TH domain

132

222

0.96

PF01149

Fapy_DNA_glyco

Formamidopyrimidine-DNA glycosylase N-terminal domain

1

116

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
3sat-assembly1.cif.gz_A mutm slanted complex 6 with r112a mutation 0.9213 2 272
3saw-assembly1.cif.gz_A mutm slanted complex 8 with r112a mutation 0.9177 2 272
3sas-assembly1.cif.gz_A mutm slanted complex 4 with r112a mutation 0.9146 2 272
3sat-assembly1.cif.gz_A mutm slanted complex 6 with r112a mutation 0.9143 2 272
3saw-assembly1.cif.gz_A mutm slanted complex 8 with r112a mutation 0.9108 2 272
ID Description Score Start End Superfamily
af_P9WNC3_146_285_1.10.8.50 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9525 135 273 1.10.8.50
af_P9WNC3_1_133_3.20.190.10 Alpha Beta;Alpha-Beta Barrel;N-terminal domain of MutM-like DNA repair proteins;MutM-like, N-terminal 0.9461 1 120 3.20.190.10
af_P9WNC3_146_285_1.10.8.50 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.9395 135 273 1.10.8.50
1kfvB01 Alpha Beta;Alpha-Beta Barrel;N-terminal domain of MutM-like DNA repair proteins;MutM-like, N-terminal 0.9322 3 119 3.20.190.10
3sarA02 Mainly Alpha;Orthogonal Bundle;Helicase, Ruva Protein; domain 3; 0.917 136 272 1.10.8.50
ID Description Score Start End GO Terms
AF-A0A165EEA7-F1-model_v4 Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18) 0.9666 1 275 GO:0003684
GO:0006284
GO:0008270
GO:0034039
GO:0140078
AF-A0A6A0AUE4-F1-model_v4 Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18) 0.9646 1 276 GO:0003684
GO:0006284
GO:0008270
GO:0034039
GO:0140078
AF-A0A2T7TPZ0-F1-model_v4 DNA-formamidopyrimidine glycosylase 0.962 1 277 GO:0003684
GO:0006284
GO:0008270
GO:0034039
GO:0140078
AF-A0A4Y3VV96-F1-model_v4 deleted 0.9607 51 258
AF-A0A246EA76-F1-model_v4 Formamidopyrimidine-DNA glycosylase (Fapy-DNA glycosylase) (EC 3.2.2.23) (DNA-(apurinic or apyrimidinic site) lyase MutM) (AP lyase MutM) (EC 4.2.99.18) 0.9571 1 273 GO:0003684
GO:0006284
GO:0008270
GO:0034039
GO:0140078

Map