F390348

General Info

Members Datasets Scaffolds Average Seq Length
291 201 582 214

Family's Representative Sequence

Representative Sequence 3300013308|Ga0157375_10442008|Ga0157375_104420081
Length 258
Sequence MSKVRVAGFGVSLDGFSAGTTQSLNDPLGKRGPEIFQWFFHTKTFLAMQGQEGGSVDVDDEFARRAMENFGAFILGRNMFGPVRGPWLDSSWKGWWGDNPPYHSPTFVLTHYEREPIVMEGGTTFHFVTGGIEEALNLAKQVASDKDIKIGGGVSTVRQYLQAGLIDSLHLVLAPVVLGQGESLFSGIDLHALGFSVTEHKATERATHLVLEKGYAAHTNAAIFPINGSYFANWVTIFVPEVTESSGCCIIRLYPASW

Samples

Sample ID Description Type Environment
1 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
2 3300000546 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - LJN_Illumina_Assembled Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
5 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
6 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
7 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
8 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
9 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
10 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
11 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
12 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
19 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
20 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
32 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
36 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
37 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
38 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
39 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
40 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
41 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
42 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
43 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
49 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
50 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
51 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
52 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
53 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
54 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
55 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
56 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
57 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
58 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
64 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
65 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300021377 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 Metagenome Unclassified
68 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
69 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
70 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
71 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
72 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
111 3300030763 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
112 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
113 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
114 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
115 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
116 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
117 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
118 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
119 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
120 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
121 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
122 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
123 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
124 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
125 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
126 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
127 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
128 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
129 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
130 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
131 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
132 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
133 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
134 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
135 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
136 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
137 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
138 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
139 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
140 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
141 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
142 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
143 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
144 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
145 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
146 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
147 3300046538 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co1_12_7 rhizosphere Metagenome Rhizosphere
148 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
149 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
150 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
151 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
152 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
153 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
154 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
155 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
156 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
157 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
158 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
159 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
160 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
161 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
162 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
163 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
164 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
165 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
166 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
167 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
168 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
169 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
170 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
171 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
172 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
173 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
174 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
175 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
176 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
179 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
180 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
181 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
182 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
183 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
184 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
185 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
186 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
187 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
188 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
189 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
190 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
191 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
192 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
193 3300053725 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 endosphere Metagenome Endosphere
194 3300053729 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 endosphere Metagenome Endosphere
195 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
196 2519899620 Rhizobium sp. Pop5 Isolate Nodule
197 2643221552 Caulobacter sp. Root1472 Isolate Unclassified
198 2791355261 Rhizobium sp. J15 Isolate Nodule
199 2842395702 Rhizobium ecuadorense SEMIA 4029 Isolate Nodule
200 8005395548 Rhizobium sp. R339 Isolate Nodule
201 8005695170 Rhizobium sp. RMa-01 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.59
Metatranscriptomes 0.34
Isolates 2.06

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.9
Nodule 1.37
Rhizoplane 2.75
Rhizosphere 83.51
Stem 0
Stem Tuber 0
Unclassified 2.06

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157375_10442008 3300013308 Bacteria 1466
2 LJNas_1000062 3300000546 Bacteria 14495
3 JGI24739J22299_10019299 3300001989 Bacteria 2441
4 JGI24744J21845_10001562 3300002077 Bacteria 4570
5 JGI25406J46586_10002245 3300003203 Bacteria 9114
6 Ga0055526_1001022 3300003771 Bacteria 20465
7 Ga0055528_1000044 3300003790 Bacteria 102325
8 Ga0070658_10000004 3300005327 Bacteria 402230
9 Ga0070658_10056134 3300005327 Bacteria 3200
10 Ga0070683_100143572 3300005329 Bacteria 2262
11 Ga0070683_100356643 3300005329 Bacteria 1393
12 Ga0068869_100007504 3300005334 Bacteria 6976
13 Ga0070666_10224732 3300005335 Bacteria 1325
14 Ga0070680_100118178 3300005336 Bacteria 2211
15 Ga0070660_100026956 3300005339 Bacteria 4283
16 Ga0070668_100001657 3300005347 Bacteria 16162
17 Ga0070671_100061122 3300005355 Bacteria 3137
18 Ga0070709_10386534 3300005434 Bacteria 1042
19 Ga0070713_100020202 3300005436 Bacteria 5101
20 Ga0070713_100030577 3300005436 Bacteria 4278
21 Ga0070663_100094427 3300005455 Bacteria 2221
22 Ga0070662_100027377 3300005457 Bacteria 3956
23 Ga0070662_100038422 3300005457 Bacteria 3400
24 Ga0070681_10324311 3300005458 Bacteria 1450
25 Ga0070681_10548384 3300005458 Unclassified 1070
26 Ga0070698_100054753 3300005471 Bacteria 4050
27 Ga0070698_100816910 3300005471 Unclassified 876
28 Ga0070679_100077624 3300005530 Bacteria 3310
29 Ga0070684_100037130 3300005535 Bacteria 4177
30 Ga0070684_100367844 3300005535 Bacteria 1324
31 Ga0068853_100036420 3300005539 Bacteria 4184
32 Ga0070665_100091373 3300005548 Bacteria 3049
33 Ga0070665_100996314 3300005548 Bacteria 850
34 Ga0068855_100001721 3300005563 Bacteria 27348
35 Ga0068855_100038852 3300005563 Bacteria 5653
36 Ga0068855_100166604 3300005563 Bacteria 2497
37 Ga0068855_100733379 3300005563 Bacteria 1055
38 Ga0070664_100309094 3300005564 Bacteria 1430
39 Ga0070664_100474173 3300005564 Bacteria 1151
40 Ga0068857_100040917 3300005577 Bacteria 4108
41 Ga0068856_100001367 3300005614 Bacteria 25662
42 Ga0068856_100012960 3300005614 Bacteria 8072
43 Ga0068864_100006099 3300005618 Bacteria 9885
44 Ga0068861_100784476 3300005719 Bacteria 893
45 Ga0068851_10012172 3300005834 Bacteria 4052
46 Ga0068863_100080497 3300005841 Bacteria 3085
47 Ga0068863_100299044 3300005841 Bacteria 1561
48 Ga0068862_100000633 3300005844 Bacteria 36441
49 Ga0081539_10000172 3300005985 Bacteria 151505
50 Ga0070715_10301928 3300006163 Bacteria 857
51 Ga0070716_100048077 3300006173 Bacteria 2410
52 Ga0070712_100038690 3300006175 Bacteria 3261
53 Ga0068871_100064627 3300006358 Bacteria 2996
54 Ga0075436_100304493 3300006914 Bacteria 1143
55 Ga0099794_10013911 3300007265 Bacteria 3514
56 Ga0099795_10008136 3300007788 Bacteria 2971
57 Ga0099795_10061845 3300007788 Bacteria 1391
58 Ga0105240_10000485 3300009093 Bacteria 73513
59 Ga0105240_10020789 3300009093 Bacteria 8743
60 Ga0105240_10277343 3300009093 Bacteria 1927
61 Ga0111539_10023303 3300009094 Bacteria 7605
62 Ga0105245_10003461 3300009098 Bacteria 14140
63 Ga0105245_10114468 3300009098 Bacteria 2512
64 Ga0105247_10138862 3300009101 Bacteria 1591
65 Ga0114129_10329646 3300009147 Bacteria 2027
66 Ga0114129_10544925 3300009147 Bacteria 1509
67 Ga0105243_10075065 3300009148 Bacteria 2744
68 Ga0105243_10332958 3300009148 Bacteria 1387
69 Ga0105243_11132623 3300009148 Bacteria 792
70 Ga0105241_10005528 3300009174 Bacteria 9337
71 Ga0105241_10065399 3300009174 Bacteria 2810
72 Ga0105241_10139522 3300009174 Bacteria 1972
73 Ga0105241_10955385 3300009174 Bacteria 799
74 Ga0105242_10099500 3300009176 Bacteria 2461
75 Ga0105242_10119085 3300009176 Bacteria 2263
76 Ga0105248_10113375 3300009177 Bacteria 3057
77 Ga0105248_10323064 3300009177 Bacteria 1738
78 Ga0105237_10134647 3300009545 Bacteria 2465
79 Ga0105237_10450103 3300009545 Bacteria 1293
80 Ga0105237_10558039 3300009545 Bacteria 1152
81 Ga0105238_10066399 3300009551 Bacteria 3609
82 Ga0105238_10067573 3300009551 Bacteria 3575
83 Ga0105238_10166224 3300009551 Bacteria 2182
84 Ga0105238_10192256 3300009551 Bacteria 2017
85 Ga0105239_10015143 3300010375 Bacteria 8547
86 Ga0105239_10064616 3300010375 Bacteria 4017
87 Ga0105239_10692450 3300010375 Bacteria 1165
88 Ga0105246_10049243 3300011119 Bacteria 2885
89 Ga0105246_10112528 3300011119 Bacteria 2002
90 Ga0157373_10065798 3300013100 Bacteria 2565
91 Ga0157373_10163362 3300013100 Bacteria 1567
92 Ga0157371_10081425 3300013102 Bacteria 2292
93 Ga0157370_10002363 3300013104 Bacteria 22757
94 Ga0157370_10035502 3300013104 Bacteria 4844
95 Ga0157369_10004206 3300013105 Bacteria 17041
96 Ga0157369_10012868 3300013105 Bacteria 9485
97 Ga0157369_10346689 3300013105 Bacteria 1543
98 Ga0157369_10635117 3300013105 Bacteria 1101
99 Ga0157374_10415977 3300013296 Bacteria 1343
100 Ga0157378_10020571 3300013297 Bacteria 5803
101 Ga0157378_10840604 3300013297 Bacteria 946
102 Ga0163162_10004698 3300013306 Bacteria 13173
103 Ga0163162_10461045 3300013306 Bacteria 1402
104 Ga0163162_10906576 3300013306 Bacteria 994
105 Ga0157372_10076140 3300013307 Bacteria 3788
106 Ga0157372_10094920 3300013307 Bacteria 3397
107 Ga0157372_10095333 3300013307 Bacteria 3390
108 Ga0157372_10683856 3300013307 Bacteria 1194
109 Ga0157375_10012000 3300013308 Bacteria 7671
110 Ga0163163_10004583 3300014325 Bacteria 11801
111 Ga0163163_10487179 3300014325 Bacteria 1294
112 Ga0157379_10015523 3300014968 Bacteria 6684
113 Ga0157376_10199158 3300014969 Bacteria 1841
114 Ga0157376_11377919 3300014969 Bacteria 736
115 Ga0213874_10006137 3300021377 Bacteria 2832
116 Ga0209455_1003161 3300025272 Bacteria 5983
117 Ga0209673_1000013 3300025273 Bacteria 571633
118 Ga0209564_1000167 3300025295 Bacteria 159653
119 Ga0209256_1000258 3300025299 Bacteria 94293
120 Ga0207656_10217297 3300025321 Bacteria 928
121 Ga0207647_10001101 3300025904 Bacteria 20847
122 Ga0207647_10121481 3300025904 Bacteria 1540
123 Ga0207645_10142430 3300025907 Bacteria 1562
124 Ga0207705_10000077 3300025909 Bacteria 122309
125 Ga0207684_10350873 3300025910 Unclassified 1270
126 Ga0207654_10198370 3300025911 Bacteria 1320
127 Ga0207654_10321916 3300025911 Bacteria 1057
128 Ga0207707_10098771 3300025912 Bacteria 2552
129 Ga0207695_10005404 3300025913 Bacteria 16963
130 Ga0207695_10014085 3300025913 Bacteria 9496
131 Ga0207695_10219170 3300025913 Bacteria 1811
132 Ga0207671_10093703 3300025914 Bacteria 2265
133 Ga0207671_10207667 3300025914 Bacteria 1531
134 Ga0207693_10062544 3300025915 Bacteria 2916
135 Ga0207663_10187792 3300025916 Bacteria 1482
136 Ga0207660_10143047 3300025917 Bacteria 1830
137 Ga0207660_10154930 3300025917 Bacteria 1763
138 Ga0207657_10160100 3300025919 Bacteria 1829
139 Ga0207652_10123955 3300025921 Bacteria 2301
140 Ga0207652_10143508 3300025921 Bacteria 2136
141 Ga0207694_10037083 3300025924 Bacteria 3742
142 Ga0207694_10110359 3300025924 Bacteria 2188
143 Ga0207650_10409534 3300025925 Bacteria 1124
144 Ga0207687_10089163 3300025927 Bacteria 2245
145 Ga0207687_10093027 3300025927 Bacteria 2203
146 Ga0207687_10323521 3300025927 Bacteria 1249
147 Ga0207687_10818824 3300025927 Bacteria 795
148 Ga0207700_10032171 3300025928 Bacteria 3738
149 Ga0207700_10404082 3300025928 Bacteria 1197
150 Ga0207664_10261337 3300025929 Bacteria 1514
151 Ga0207644_10068002 3300025931 Bacteria 2598
152 Ga0207690_10636065 3300025932 Bacteria 873
153 Ga0207706_10041495 3300025933 Bacteria 4079
154 Ga0207686_10066230 3300025934 Bacteria 2306
155 Ga0207686_10353453 3300025934 Bacteria 1107
156 Ga0207670_11040873 3300025936 Bacteria 690
157 Ga0207665_10031015 3300025939 Bacteria 3536
158 Ga0207665_10177781 3300025939 Bacteria 1540
159 Ga0207665_10266758 3300025939 Bacteria 1270
160 Ga0207689_10051048 3300025942 Bacteria 3409
161 Ga0207661_10058715 3300025944 Bacteria 3097
162 Ga0207679_10065953 3300025945 Bacteria 2711
163 Ga0207667_10001166 3300025949 Bacteria 32987
164 Ga0207667_10038251 3300025949 Bacteria 5125
165 Ga0207668_10001697 3300025972 Bacteria 12886
166 Ga0207639_10964072 3300026041 Bacteria 798
167 Ga0207678_10216838 3300026067 Bacteria 1638
168 Ga0207702_10000761 3300026078 Bacteria 34283
169 Ga0207702_10025256 3300026078 Bacteria 4930
170 Ga0207641_10008868 3300026088 Bacteria 8304
171 Ga0207641_10273257 3300026088 Bacteria 1586
172 Ga0207676_10038202 3300026095 Bacteria 3662
173 Ga0207674_10030741 3300026116 Bacteria 5644
174 Ga0207674_10050518 3300026116 Bacteria 4247
175 Ga0268266_10029306 3300028379 Bacteria 4679
176 Ga0268266_10657986 3300028379 Bacteria 1008
177 Ga0268266_10809063 3300028379 Bacteria 905
178 Ga0268265_10020983 3300028380 Bacteria 4567
179 Ga0265338_10298112 3300028800 Bacteria 1173
180 Ga0265763_1000197 3300030763 Bacteria 3271
181 Ga0265325_10034605 3300031241 Bacteria 2687
182 Ga0307414_10320148 3300032004 Unclassified 1320
183 Ga0307510_10058716 3300033180 Bacteria 3980
184 Ga0373943_0034259 3300035170 Bacteria 2422
185 Ga0373927_0006914 3300035695 Bacteria 7708
186 Ga0373947_0006834 3300035725 Bacteria 6615
187 Ga0373937_0001561 3300036401 Bacteria 19236
188 Ga0373937_0020901 3300036401 Bacteria 5871
189 Ga0373937_0346115 3300036401 Bacteria 1408
190 Ga0373937_0438529 3300036401 Bacteria 1240
191 Ga0373925_0000905 3300037068 Bacteria 27102
192 Ga0373925_0005154 3300037068 Bacteria 9791
193 Ga0395900_0170009 3300037418 Bacteria 2219
194 Ga0395900_0513663 3300037418 Bacteria 1147
195 Ga0436364_1093518 3300037853 Bacteria 2214
196 Ga0436365_0064248 3300039437 Unclassified 895
197 Ga0436365_1266965 3300039437 Bacteria 1055
198 Ga0436360_0817588 3300039438 Bacteria 1244
199 Ga0436360_1204876 3300039438 Bacteria 3598
200 Ga0436361_1116340 3300039447 Bacteria 1091
201 Ga0436362_0697166 3300039453 Bacteria 1273
202 Ga0439448_0001961 3300042005 Bacteria 5499
203 Ga0439448_0003201 3300042005 Bacteria 4519
204 Ga0439455_0000424 3300042012 Bacteria 5681
205 Ga0439458_0002719 3300042157 Bacteria 4270
206 Ga0466963_0179723 3300044694 Bacteria 1477
207 Ga0466963_0451822 3300044694 Bacteria 907
208 Ga0466958_0078200 3300045836 Bacteria 2033
209 Ga0466967_0916781 3300045976 Bacteria 872
210 Ga0495651_0001269 3300046462 Bacteria 19545
211 Ga0495653_0170005 3300046463 Bacteria 1505
212 Ga0495650_0000302 3300046471 Bacteria 89516
213 Ga0495650_0099214 3300046471 Bacteria 1096
214 Ga0495580_0091998 3300046472 Bacteria 2111
215 Ga0495664_0080603 3300046477 Bacteria 1951
216 Ga0495664_0163215 3300046477 Bacteria 1352
217 Ga0495584_0105692 3300046491 Bacteria 1423
218 Ga0495585_0131667 3300046492 Bacteria 1316
219 Ga0495583_0001345 3300046506 Bacteria 25472
220 Ga0495583_0069540 3300046506 Bacteria 1550
221 Ga0495583_0143996 3300046506 Bacteria 991
222 Ga0495620_0074545 3300046515 Bacteria 1382
223 Ga0495630_0012583 3300046517 Bacteria 6148
224 Ga0495631_0048229 3300046518 Bacteria 1868
225 Ga0495643_0009838 3300046522 Bacteria 5914
226 Ga0495643_0016758 3300046522 Bacteria 4301
227 Ga0495665_0106479 3300046531 Bacteria 1471
228 Ga0495665_0163247 3300046531 Bacteria 1161
229 Ga0495640_0059860 3300046533 Bacteria 2592
230 Ga0495640_0346960 3300046533 Bacteria 917
231 Ga0495587_0378318 3300046536 Bacteria 788
232 Ga0495609_0026345 3300046538 Bacteria 2663
233 Ga0495645_0178193 3300046543 Bacteria 1458
234 Ga0495622_0063694 3300046557 Bacteria 1705
235 Ga0495633_0035870 3300046558 Bacteria 2379
236 Ga0495667_0005331 3300046559 Bacteria 8689
237 Ga0495634_0082695 3300046642 Bacteria 2098
238 Ga0495625_0069730 3300046660 Bacteria 2469
239 Ga0495625_0133589 3300046660 Bacteria 1679
240 Ga0495635_0665979 3300046663 Bacteria 676
241 Ga0495661_0047103 3300046665 Bacteria 2627
242 Ga0495624_0167939 3300046690 Bacteria 1339
243 Ga0495600_0001875 3300046809 Bacteria 11796
244 Ga0495674_0161294 3300047319 Bacteria 1876
245 Ga0495680_0003471 3300047322 Bacteria 15500
246 Ga0495687_001300 3300047443 Bacteria 23447
247 Ga0495675_0001076 3300047444 Bacteria 16568
248 Ga0495684_0359675 3300047471 Bacteria 1031
249 Ga0496102_0298895 3300048905 Bacteria 1517
250 Ga0496104_0204157 3300048907 Bacteria 1888
251 Ga0496104_0584342 3300048907 Bacteria 1027
252 Ga0496105_0089494 3300048908 Bacteria 2543
253 Ga0496108_0197132 3300048911 Bacteria 1747
254 Ga0496110_0187250 3300048913 Bacteria 1880
255 Ga0496112_0183280 3300048915 Bacteria 2057
256 Ga0496115_0078457 3300048918 Bacteria 2687
257 Ga0496116_0167577 3300048919 Bacteria 1195
258 Ga0496117_0086762 3300048920 Bacteria 2032
259 Ga0496118_0014451 3300048921 Bacteria 7391
260 Ga0496121_0255396 3300048924 Bacteria 1213
261 Ga0496126_0164546 3300048929 Bacteria 1894
262 Ga0496126_0374641 3300048929 Bacteria 1160
263 Ga0495682_0061151 3300049460 Bacteria 1360
264 Ga0501032_0590691 3300049569 Bacteria 707
265 Ga0501034_0057154 3300049571 Bacteria 3923
266 Ga0501037_0472990 3300049573 Bacteria 853
267 Ga0501047_0081737 3300049581 Bacteria 3106
268 Ga0501080_0884709 3300049742 Bacteria 779
269 nmdc:mga0k408_146181_c1 3300050493 Bacteria 1407
270 Ga0500643_010131 3300053087 Bacteria 3536
271 Ga0500583_0079941 3300053092 Bacteria 1578
272 Ga0500651_0380608 3300053093 Bacteria 796
273 Ga0500569_073981 3300053109 Bacteria 1077
274 Ga0500572_069832 3300053111 Bacteria 1084
275 Ga0500595_038769 3300053119 Bacteria 1546
276 Ga0500595_057065 3300053119 Unclassified 1191
277 Ga0500608_000817 3300053122 Bacteria 11284
278 Ga0500559_0002839 3300053136 Bacteria 8752
279 Ga0500590_009983 3300053148 Bacteria 4785
280 Ga0500619_016525 3300053154 Bacteria 2032
281 Ga0500619_022004 3300053154 Bacteria 1845
282 Ga0500637_0092098 3300053178 Bacteria 1756
283 Ga0500576_090436 3300053725 Bacteria 1272
284 Ga0500625_025495 3300053729 Bacteria 2797
285 Ga0500645_000221 3300053730 Bacteria 43327
286 2520382051 2519899620 Bacteria 6499161
287 2643779866 2643221552 Bacteria 5708754
288 2793329076 2791355261 Bacteria 6661293
289 2842398959 2842395702 Bacteria 6780583
290 8005396468 8005395548 Bacteria 6806915
291 8005696576 8005695170 Bacteria 6912330
292 Ga0157375_10442008
293 LJNas_1000062
294 JGI24739J22299_10019299
295 JGI24744J21845_10001562
296 JGI25406J46586_10002245
297 Ga0055526_1001022
298 Ga0055528_1000044
299 Ga0070658_10000004
300 Ga0070658_10056134
301 Ga0070683_100143572
302 Ga0070683_100356643
303 Ga0068869_100007504
304 Ga0070666_10224732
305 Ga0070680_100118178
306 Ga0070660_100026956
307 Ga0070668_100001657
308 Ga0070671_100061122
309 Ga0070709_10386534
310 Ga0070713_100020202
311 Ga0070713_100030577
312 Ga0070663_100094427
313 Ga0070662_100027377
314 Ga0070662_100038422
315 Ga0070681_10324311
316 Ga0070681_10548384
317 Ga0070698_100054753
318 Ga0070698_100816910
319 Ga0070679_100077624
320 Ga0070684_100037130
321 Ga0070684_100367844
322 Ga0068853_100036420
323 Ga0070665_100091373
324 Ga0070665_100996314
325 Ga0068855_100001721
326 Ga0068855_100038852
327 Ga0068855_100166604
328 Ga0068855_100733379
329 Ga0070664_100309094
330 Ga0070664_100474173
331 Ga0068857_100040917
332 Ga0068856_100001367
333 Ga0068856_100012960
334 Ga0068864_100006099
335 Ga0068861_100784476
336 Ga0068851_10012172
337 Ga0068863_100080497
338 Ga0068863_100299044
339 Ga0068862_100000633
340 Ga0081539_10000172
341 Ga0070715_10301928
342 Ga0070716_100048077
343 Ga0070712_100038690
344 Ga0068871_100064627
345 Ga0075436_100304493
346 Ga0099794_10013911
347 Ga0099795_10008136
348 Ga0099795_10061845
349 Ga0105240_10000485
350 Ga0105240_10020789
351 Ga0105240_10277343
352 Ga0111539_10023303
353 Ga0105245_10003461
354 Ga0105245_10114468
355 Ga0105247_10138862
356 Ga0114129_10329646
357 Ga0114129_10544925
358 Ga0105243_10075065
359 Ga0105243_10332958
360 Ga0105243_11132623
361 Ga0105241_10005528
362 Ga0105241_10065399
363 Ga0105241_10139522
364 Ga0105241_10955385
365 Ga0105242_10099500
366 Ga0105242_10119085
367 Ga0105248_10113375
368 Ga0105248_10323064
369 Ga0105237_10134647
370 Ga0105237_10450103
371 Ga0105237_10558039
372 Ga0105238_10066399
373 Ga0105238_10067573
374 Ga0105238_10166224
375 Ga0105238_10192256
376 Ga0105239_10015143
377 Ga0105239_10064616
378 Ga0105239_10692450
379 Ga0105246_10049243
380 Ga0105246_10112528
381 Ga0157373_10065798
382 Ga0157373_10163362
383 Ga0157371_10081425
384 Ga0157370_10002363
385 Ga0157370_10035502
386 Ga0157369_10004206
387 Ga0157369_10012868
388 Ga0157369_10346689
389 Ga0157369_10635117
390 Ga0157374_10415977
391 Ga0157378_10020571
392 Ga0157378_10840604
393 Ga0163162_10004698
394 Ga0163162_10461045
395 Ga0163162_10906576
396 Ga0157372_10076140
397 Ga0157372_10094920
398 Ga0157372_10095333
399 Ga0157372_10683856
400 Ga0157375_10012000
401 Ga0163163_10004583
402 Ga0163163_10487179
403 Ga0157379_10015523
404 Ga0157376_10199158
405 Ga0157376_11377919
406 Ga0213874_10006137
407 Ga0209455_1003161
408 Ga0209673_1000013
409 Ga0209564_1000167
410 Ga0209256_1000258
411 Ga0207656_10217297
412 Ga0207647_10001101
413 Ga0207647_10121481
414 Ga0207645_10142430
415 Ga0207705_10000077
416 Ga0207684_10350873
417 Ga0207654_10198370
418 Ga0207654_10321916
419 Ga0207707_10098771
420 Ga0207695_10005404
421 Ga0207695_10014085
422 Ga0207695_10219170
423 Ga0207671_10093703
424 Ga0207671_10207667
425 Ga0207693_10062544
426 Ga0207663_10187792
427 Ga0207660_10143047
428 Ga0207660_10154930
429 Ga0207657_10160100
430 Ga0207652_10123955
431 Ga0207652_10143508
432 Ga0207694_10037083
433 Ga0207694_10110359
434 Ga0207650_10409534
435 Ga0207687_10089163
436 Ga0207687_10093027
437 Ga0207687_10323521
438 Ga0207687_10818824
439 Ga0207700_10032171
440 Ga0207700_10404082
441 Ga0207664_10261337
442 Ga0207644_10068002
443 Ga0207690_10636065
444 Ga0207706_10041495
445 Ga0207686_10066230
446 Ga0207686_10353453
447 Ga0207670_11040873
448 Ga0207665_10031015
449 Ga0207665_10177781
450 Ga0207665_10266758
451 Ga0207689_10051048
452 Ga0207661_10058715
453 Ga0207679_10065953
454 Ga0207667_10001166
455 Ga0207667_10038251
456 Ga0207668_10001697
457 Ga0207639_10964072
458 Ga0207678_10216838
459 Ga0207702_10000761
460 Ga0207702_10025256
461 Ga0207641_10008868
462 Ga0207641_10273257
463 Ga0207676_10038202
464 Ga0207674_10030741
465 Ga0207674_10050518
466 Ga0268266_10029306
467 Ga0268266_10657986
468 Ga0268266_10809063
469 Ga0268265_10020983
470 Ga0265338_10298112
471 Ga0265763_1000197
472 Ga0265325_10034605
473 Ga0307414_10320148
474 Ga0307510_10058716
475 Ga0373943_0034259
476 Ga0373927_0006914
477 Ga0373947_0006834
478 Ga0373937_0001561
479 Ga0373937_0020901
480 Ga0373937_0346115
481 Ga0373937_0438529
482 Ga0373925_0000905
483 Ga0373925_0005154
484 Ga0395900_0170009
485 Ga0395900_0513663
486 Ga0436364_1093518
487 Ga0436365_0064248
488 Ga0436365_1266965
489 Ga0436360_0817588
490 Ga0436360_1204876
491 Ga0436361_1116340
492 Ga0436362_0697166
493 Ga0439448_0001961
494 Ga0439448_0003201
495 Ga0439455_0000424
496 Ga0439458_0002719
497 Ga0466963_0179723
498 Ga0466963_0451822
499 Ga0466958_0078200
500 Ga0466967_0916781
501 Ga0495651_0001269
502 Ga0495653_0170005
503 Ga0495650_0000302
504 Ga0495650_0099214
505 Ga0495580_0091998
506 Ga0495664_0080603
507 Ga0495664_0163215
508 Ga0495584_0105692
509 Ga0495585_0131667
510 Ga0495583_0001345
511 Ga0495583_0069540
512 Ga0495583_0143996
513 Ga0495620_0074545
514 Ga0495630_0012583
515 Ga0495631_0048229
516 Ga0495643_0009838
517 Ga0495643_0016758
518 Ga0495665_0106479
519 Ga0495665_0163247
520 Ga0495640_0059860
521 Ga0495640_0346960
522 Ga0495587_0378318
523 Ga0495609_0026345
524 Ga0495645_0178193
525 Ga0495622_0063694
526 Ga0495633_0035870
527 Ga0495667_0005331
528 Ga0495634_0082695
529 Ga0495625_0069730
530 Ga0495625_0133589
531 Ga0495635_0665979
532 Ga0495661_0047103
533 Ga0495624_0167939
534 Ga0495600_0001875
535 Ga0495674_0161294
536 Ga0495680_0003471
537 Ga0495687_001300
538 Ga0495675_0001076
539 Ga0495684_0359675
540 Ga0496102_0298895
541 Ga0496104_0204157
542 Ga0496104_0584342
543 Ga0496105_0089494
544 Ga0496108_0197132
545 Ga0496110_0187250
546 Ga0496112_0183280
547 Ga0496115_0078457
548 Ga0496116_0167577
549 Ga0496117_0086762
550 Ga0496118_0014451
551 Ga0496121_0255396
552 Ga0496126_0164546
553 Ga0496126_0374641
554 Ga0495682_0061151
555 Ga0501032_0590691
556 Ga0501034_0057154
557 Ga0501037_0472990
558 Ga0501047_0081737
559 Ga0501080_0884709
560 nmdc:mga0k408_146181_c1
561 Ga0500643_010131
562 Ga0500583_0079941
563 Ga0500651_0380608
564 Ga0500569_073981
565 Ga0500572_069832
566 Ga0500595_038769
567 Ga0500595_057065
568 Ga0500608_000817
569 Ga0500559_0002839
570 Ga0500590_009983
571 Ga0500619_016525
572 Ga0500619_022004
573 Ga0500637_0092098
574 Ga0500576_090436
575 Ga0500625_025495
576 Ga0500645_000221
577 2520382051
578 2643779866
579 2793329076
580 2842398959
581 8005396468
582 8005696576

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01872

RibD_C

RibD C-terminal domain

4

210

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3kgy-assembly1.cif.gz_B crystal structure of putative dihydrofolate reductase (yp_001636057.1) from chloroflexus aurantiacus j-10-fl at 1.50 a resolution 0.8544 1 214
3kgy-assembly1.cif.gz_B crystal structure of putative dihydrofolate reductase (yp_001636057.1) from chloroflexus aurantiacus j-10-fl at 1.50 a resolution 0.8435 1 214
3jtw-assembly2.cif.gz_B-3 crystal structure of putative dihydrofolate reductase (yp_805003.1) from pediococcus pentosaceus atcc 25745 at 1.90 a resolution 0.7635 1 214
3jtw-assembly2.cif.gz_B-3 crystal structure of putative dihydrofolate reductase (yp_805003.1) from pediococcus pentosaceus atcc 25745 at 1.90 a resolution 0.7594 1 214
3tq8-assembly1.cif.gz_A structure of the dihydrofolate reductase (fola) from coxiella burnetii in complex with trimethoprim 0.7482 1 214
ID Description Score Start End Superfamily
3kgyB00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8593 2 214 3.40.430.10
3kgyB00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.8336 2 214 3.40.430.10
2xw7B00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.7479 1 214 3.40.430.10
3jtwB00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.7372 1 214 3.40.430.10
1vdrA00 Alpha Beta;3-Layer(aba) Sandwich;Dihydrofolate Reductase, subunit A;Dihydrofolate Reductase, subunit A 0.7362 2 214 3.40.430.10
ID Description Score Start End GO Terms
AF-A0A839XBY1-F1-model_v4 deleted 0.9795 26 213
AF-A0A3S2DEI3-F1-model_v4 Dihydrofolate reductase 0.9778 42 214 GO:0008703
GO:0009231
AF-A0A1M7JXC2-F1-model_v4 RibD C-terminal domain-containing protein 0.9764 53 213 GO:0008703
GO:0009231
AF-A0A527X732-F1-model_v4 Dihydrofolate reductase 0.9737 73 214 GO:0008703
GO:0009231
AF-A0A3S1R6B5-F1-model_v4 Dihydrofolate reductase 0.9732 57 199 GO:0008703
GO:0009231

Map