F390329

General Info

Members Datasets Scaffolds Average Seq Length
291 215 583 427

Family's Representative Sequence

Representative Sequence 3300010159|Ga0099796_10000008|Ga0099796_100000084
Length 472
Sequence MASANRGPRRGGPPAPCRTGRKLASYATCAAAGAGAFLKEATMLIGTAPRRVAIVGGIRIPFARSHGAYADQSNQDLLTATLRGLVERFRLRGERLGDVIGGAVIKHSRDFNLVRESLMSTELDAQTPGLDIQRACGTGLEAAILIANKIALGQIDAGIGCGVDTVSDPPVVFPDSYRKILLRSYRGRSFGQRLTPWFGLRPRDLKPTMPEVIEPRTGLSMGQACELMVSTWNISRAEQDRAAFESHVKAAAAWKEGFYGDLVVPHAGLQRDNNVRADTTVEKLATLRPVFRTDGKGTMTAGNSTPLTDGAAAVLLASEDWARARKLPVLAYLRAGKSWAVDFASGHEGLLMAPAYAASAMLSDTQLALQDFDYYELHEAFAAQMLCTLKAWESPEFCRERLGRSAALGAIEPRRINVKGGSVALGHPFAATGGRILAALAKLLANDTGARRGLISVCTAGGMGVTAIVERA

Samples

Sample ID Description Type Environment
1 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
5 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
6 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
7 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
15 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
16 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
25 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
28 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
29 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
30 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
33 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
34 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
38 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
39 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
40 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
41 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
42 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
43 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
44 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
49 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
50 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
51 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
56 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
57 3300009979 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_126 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
60 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
61 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
62 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
63 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
64 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
69 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
70 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
71 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
72 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027543 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes) (version 2) Metagenome Rhizosphere
102 3300027552 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S AM (SPAdes) (version 2) Metagenome Rhizosphere
103 3300027617 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S AM (SPAdes) (version 2) Metagenome Rhizosphere
104 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
105 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
106 3300027717 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes) (version 2) Metagenome Rhizosphere
107 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
111 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
112 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
113 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
114 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
115 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
116 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
117 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
118 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
119 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
120 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
121 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
122 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
123 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
124 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
125 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
126 3300033527 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
127 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
128 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
129 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
130 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
131 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
132 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
133 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
134 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
135 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
136 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
137 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
138 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
139 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
140 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
141 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
142 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
143 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
144 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
145 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
146 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
147 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
148 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
149 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
150 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
151 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
152 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
153 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
154 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
155 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
156 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
157 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
158 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
159 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
160 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
161 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
162 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
163 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
164 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
165 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
166 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
167 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
171 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
173 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
175 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
176 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
177 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
178 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
179 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
180 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
181 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
182 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
183 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
184 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
185 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
186 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
187 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
188 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
189 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
190 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
191 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
192 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
193 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
194 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
195 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
196 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
197 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
198 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
199 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
200 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
201 2643221674 Devosia sp. Root436 Isolate Unclassified
202 2738543020 Pseudomonas sp. GV054 Isolate Unclassified
203 2738543021 Pseudomonas sp. GV071 Isolate Unclassified
204 2791355048 Caulobacter flavus CGMCC1 15093 Isolate Rhizosphere
205 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
206 2842805378 Pseudomonas sp. R-72599 Isolate Unclassified
207 2843744320 Caulobacter flavus RHGG3 Isolate Unclassified
208 2849560528 Caulobacter zeae 410 Isolate Unclassified
209 2849573788 Caulobacter endophyticus 774 Isolate Unclassified
210 2851153111 Caulobacter radicis 736 Isolate Unclassified
211 2867346516 Streptomyces radicis AZ1-7 Isolate Unclassified
212 2898329390 Caulobacter sp. 602-2 Isolate Rhizosphere
213 2932401849 Devosia sp. 2618 Isolate Rhizosphere
214 2941485952 Brevundimonas faecalis 2814 Isolate Rhizosphere
215 8011350971 Pseudomonas sp. 30_B Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 94.16
Metatranscriptomes 0.34
Isolates 5.5

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.72
Nodule 0
Rhizoplane 4.81
Rhizosphere 86.94
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0099796_10000008 3300010159 Bacteria 63717
2 rootH1_10113883 3300003316 Bacteria 4772
3 rootH1_10113883 3300003323 Bacteria 2167
4 Ga0065707_10081985 3300005295 Bacteria 26120
5 Ga0070676_10010293 3300005328 Bacteria 5071
6 Ga0070690_100016717 3300005330 Bacteria 4401
7 Ga0068869_100051313 3300005334 Bacteria 2993
8 Ga0070680_100004379 3300005336 Bacteria 10628
9 Ga0070680_100033141 3300005336 Bacteria 4162
10 Ga0070682_100134250 3300005337 Bacteria 1679
11 Ga0068868_100008391 3300005338 Bacteria 7395
12 Ga0070691_10002043 3300005341 Bacteria 8908
13 Ga0070668_100006772 3300005347 Bacteria 8495
14 Ga0070669_100170245 3300005353 Bacteria 1697
15 Ga0070659_100146518 3300005366 Bacteria 1924
16 Ga0070667_100000811 3300005367 Bacteria 29195
17 Ga0070667_100017985 3300005367 Bacteria 5859
18 Ga0070714_100000761 3300005435 Bacteria 22822
19 Ga0070713_100030511 3300005436 Bacteria 4282
20 Ga0070713_100105430 3300005436 Bacteria 2449
21 Ga0070711_100132914 3300005439 Bacteria 1856
22 Ga0070705_100000230 3300005440 Bacteria 33188
23 Ga0070700_100025366 3300005441 Bacteria 3490
24 Ga0070694_100008747 3300005444 Bacteria 6203
25 Ga0070708_100010142 3300005445 Bacteria 7624
26 Ga0070662_100003592 3300005457 Bacteria 9675
27 Ga0070681_10002518 3300005458 Bacteria 16793
28 Ga0070681_10004412 3300005458 Bacteria 13403
29 Ga0070681_10114531 3300005458 Bacteria 2635
30 Ga0070681_10154011 3300005458 Bacteria 2224
31 Ga0070699_100000750 3300005518 Bacteria 30008
32 Ga0070679_100002909 3300005530 Bacteria 15568
33 Ga0070679_100040110 3300005530 Bacteria 4658
34 Ga0070679_100133686 3300005530 Bacteria 2462
35 Ga0070695_100000466 3300005545 Bacteria 20996
36 Ga0070695_100002192 3300005545 Bacteria 11193
37 Ga0070696_100000987 3300005546 Bacteria 18435
38 Ga0070696_100096077 3300005546 Bacteria 2117
39 Ga0070665_100023609 3300005548 Bacteria 6193
40 Ga0068855_100004927 3300005563 Bacteria 16286
41 Ga0068855_100005820 3300005563 Bacteria 15045
42 Ga0068855_100302895 3300005563 Bacteria 1770
43 Ga0068857_100042920 3300005577 Bacteria 4012
44 Ga0068856_100011931 3300005614 Bacteria 8414
45 Ga0068856_100073176 3300005614 Bacteria 3393
46 Ga0068859_100005997 3300005617 Bacteria 12344
47 Ga0068859_100006116 3300005617 Bacteria 12226
48 Ga0068859_100413157 3300005617 Bacteria 1445
49 Ga0068864_100014745 3300005618 Bacteria 6493
50 Ga0068861_100005674 3300005719 Bacteria 8464
51 Ga0068861_100035153 3300005719 Bacteria 3710
52 Ga0068858_100007886 3300005842 Bacteria 10264
53 Ga0068860_100005939 3300005843 Bacteria 12287
54 Ga0068860_100007223 3300005843 Bacteria 11107
55 Ga0068862_100005786 3300005844 Bacteria 10309
56 Ga0081455_10000032 3300005937 Bacteria 146266
57 Ga0081539_10000007 3300005985 Bacteria 532790
58 Ga0081539_10097880 3300005985 Bacteria 1502
59 Ga0070717_10041101 3300006028 Bacteria 3769
60 Ga0070716_100081490 3300006173 Bacteria 1932
61 Ga0070712_100119032 3300006175 Bacteria 1984
62 Ga0097621_100081690 3300006237 Bacteria 2690
63 Ga0068871_100020573 3300006358 Bacteria 5058
64 Ga0075428_100004147 3300006844 Bacteria 15954
65 Ga0075428_100235543 3300006844 Bacteria 1975
66 Ga0075428_100245691 3300006844 Bacteria 1930
67 Ga0075431_100017302 3300006847 Bacteria 7327
68 Ga0075431_100048556 3300006847 Bacteria 4378
69 Ga0075434_100122358 3300006871 Bacteria 2618
70 Ga0097620_100005997 3300006931 Bacteria 12344
71 Ga0097620_100006116 3300006931 Bacteria 12226
72 Ga0097620_100413154 3300006931 Bacteria 1445
73 Ga0075435_100151825 3300007076 Bacteria 1948
74 Ga0099795_10000028 3300007788 Bacteria 41981
75 Ga0105240_10005147 3300009093 Bacteria 19564
76 Ga0105240_10047112 3300009093 Bacteria 5457
77 Ga0105240_10050493 3300009093 Bacteria 5243
78 Ga0111539_10018494 3300009094 Bacteria 8631
79 Ga0105245_10010506 3300009098 Bacteria 8058
80 Ga0114129_10248434 3300009147 Bacteria 2389
81 Ga0105238_10007189 3300009551 Bacteria 11139
82 Ga0105238_10041800 3300009551 Bacteria 4643
83 Ga0105249_10017298 3300009553 Bacteria 6401
84 Ga0105032_100507 3300009979 Bacteria 3894
85 Ga0099796_10000896 3300010159 Bacteria 5525
86 Ga0105239_10131209 3300010375 Bacteria 2787
87 Ga0105246_10043227 3300011119 Bacteria 3056
88 Ga0157371_10000648 3300013102 Bacteria 41246
89 Ga0157370_10000085 3300013104 Bacteria 103847
90 Ga0157370_10007223 3300013104 Bacteria 12124
91 Ga0157369_10004264 3300013105 Bacteria 16906
92 Ga0157369_10176397 3300013105 Bacteria 2250
93 Ga0157378_10026866 3300013297 Bacteria 5076
94 Ga0163162_10005988 3300013306 Bacteria 11774
95 Ga0157375_10028885 3300013308 Bacteria 5206
96 Ga0163163_10002017 3300014325 Bacteria 17142
97 Ga0157380_10058453 3300014326 Bacteria 3074
98 Ga0157379_10004403 3300014968 Bacteria 12066
99 Ga0157376_10000390 3300014969 Bacteria 28544
100 Ga0157376_10015038 3300014969 Bacteria 5834
101 Ga0163161_10024985 3300017792 Bacteria 4224
102 Ga0213876_10063178 3300021384 Bacteria 1955
103 Ga0207642_10089647 3300025899 Bacteria 1516
104 Ga0207699_10009668 3300025906 Bacteria 4811
105 Ga0207643_10012531 3300025908 Bacteria 4580
106 Ga0207707_10000940 3300025912 Bacteria 28134
107 Ga0207707_10001343 3300025912 Bacteria 22914
108 Ga0207707_10006849 3300025912 Bacteria 9938
109 Ga0207707_10010526 3300025912 Bacteria 8029
110 Ga0207695_10031842 3300025913 Bacteria 5777
111 Ga0207695_10125905 3300025913 Bacteria 2524
112 Ga0207693_10006671 3300025915 Bacteria 9536
113 Ga0207660_10002141 3300025917 Bacteria 13115
114 Ga0207660_10167415 3300025917 Bacteria 1699
115 Ga0207652_10009859 3300025921 Bacteria 7686
116 Ga0207652_10208943 3300025921 Bacteria 1757
117 Ga0207681_10133818 3300025923 Bacteria 1836
118 Ga0207694_10004616 3300025924 Bacteria 10729
119 Ga0207687_10023381 3300025927 Bacteria 4119
120 Ga0207700_10030523 3300025928 Bacteria 3819
121 Ga0207664_10011736 3300025929 Bacteria 6244
122 Ga0207706_10001579 3300025933 Bacteria 22595
123 Ga0207665_10028443 3300025939 Bacteria 3691
124 Ga0207691_10001752 3300025940 Bacteria 21361
125 Ga0207689_10071276 3300025942 Bacteria 2854
126 Ga0207667_10005821 3300025949 Bacteria 15027
127 Ga0207667_10043546 3300025949 Bacteria 4764
128 Ga0207667_10058364 3300025949 Bacteria 4048
129 Ga0207712_10007153 3300025961 Bacteria 7039
130 Ga0207658_10175448 3300025986 Bacteria 1769
131 Ga0207703_10024105 3300026035 Bacteria 4786
132 Ga0207708_10000424 3300026075 Bacteria 33010
133 Ga0207702_10042821 3300026078 Bacteria 3800
134 Ga0207648_10002375 3300026089 Bacteria 20285
135 Ga0207676_10060601 3300026095 Bacteria 2994
136 Ga0207674_10002162 3300026116 Bacteria 24860
137 Ga0207675_100001591 3300026118 Bacteria 22731
138 Ga0207675_100072657 3300026118 Bacteria 3218
139 Ga0207683_10109945 3300026121 Bacteria 2467
140 Ga0209179_1000002 3300027512 Bacteria 124932
141 Ga0209999_1005756 3300027543 Bacteria 2230
142 Ga0209982_1001464 3300027552 Bacteria 3238
143 Ga0210002_1000785 3300027617 Bacteria 4320
144 Ga0209983_1004051 3300027665 Bacteria 3093
145 Ga0209971_1002657 3300027682 Bacteria 4276
146 Ga0209998_10000120 3300027717 Bacteria 31024
147 Ga0268266_10034925 3300028379 Bacteria 4276
148 Ga0268265_10000787 3300028380 Bacteria 30284
149 Ga0268264_10023170 3300028381 Bacteria 5067
150 Ga0268264_10083039 3300028381 Bacteria 2743
151 Ga0265332_10062898 3300031238 Bacteria 1586
152 Ga0265328_10001376 3300031239 Bacteria 11228
153 Ga0265340_10002123 3300031247 Bacteria 11358
154 Ga0307408_100051616 3300031548 Bacteria 2963
155 Ga0307408_100084474 3300031548 Bacteria 2381
156 Ga0307408_100117533 3300031548 Bacteria 2054
157 Ga0316575_10006826 3300031665 Bacteria 4125
158 Ga0316576_10066825 3300031727 Bacteria 2645
159 Ga0316578_10000443 3300031728 Bacteria 13709
160 Ga0316577_10090228 3300031733 Bacteria 1715
161 Ga0307413_10025586 3300031824 Bacteria 3237
162 Ga0307406_10190030 3300031901 Bacteria 1502
163 Ga0307412_10047649 3300031911 Bacteria 2816
164 Ga0307416_100085753 3300032002 Bacteria 2682
165 Ga0307416_100120605 3300032002 Bacteria 2335
166 Ga0307416_100215119 3300032002 Bacteria 1837
167 Ga0307414_10019287 3300032004 Bacteria 4222
168 Ga0307415_100019764 3300032126 Bacteria 4096
169 Ga0307415_100040031 3300032126 Bacteria 3102
170 Ga0316583_10006270 3300032133 Bacteria 4274
171 Ga0316580_10038783 3300032139 Bacteria 1472
172 Ga0316586_1006160 3300033527 Bacteria 1715
173 Ga0316574_0024596 3300035398 Bacteria 3606
174 Ga0316574_0027767 3300035398 Bacteria 3410
175 Ga0316574_0041361 3300035398 Bacteria 2841
176 Ga0316574_0140222 3300035398 Bacteria 1557
177 Ga0373937_0070904 3300036401 Bacteria 3214
178 Ga0316582_0004725 3300036647 Bacteria 6933
179 Ga0316584_0047045 3300036712 Bacteria 3222
180 Ga0395898_0070621 3300037466 Bacteria 3375
181 Ga0395905_0335170 3300037471 Bacteria 1403
182 Ga0436365_0279751 3300039437 Bacteria 3530
183 Ga0436365_0749508 3300039437 Bacteria 1921
184 Ga0436360_0111342 3300039438 Bacteria 3091
185 Ga0436363_0349241 3300039450 Bacteria 1635
186 Ga0436363_1653393 3300039450 Bacteria 7398
187 Ga0436362_0042141 3300039453 Bacteria 4271
188 Ga0436362_0253826 3300039453 Bacteria 4726
189 Ga0436362_0366211 3300039453 Bacteria 2267
190 Ga0451577_0004842 3300042876 Bacteria 14041
191 Ga0451577_0009937 3300042876 Bacteria 9121
192 Ga0466972_0030818 3300044658 Bacteria 2640
193 Ga0466963_0001879 3300044694 Bacteria 11450
194 Ga0453684_0006583 3300044712 Bacteria 21976
195 Ga0453684_0077444 3300044712 Bacteria 4167
196 Ga0466957_0007988 3300044842 Bacteria 6003
197 Ga0466957_0196502 3300044842 Bacteria 1323
198 Ga0466959_0053433 3300045049 Bacteria 2953
199 Ga0466959_0068941 3300045049 Bacteria 2562
200 Ga0451576_0013009 3300045051 Bacteria 9321
201 Ga0451576_0043986 3300045051 Bacteria 4710
202 Ga0451576_0056846 3300045051 Bacteria 4090
203 Ga0466958_0015835 3300045836 Bacteria 4331
204 Ga0466967_0120264 3300045976 Bacteria 2425
205 Ga0495603_0173318 3300046455 Bacteria 1249
206 Ga0495594_0012999 3300046499 Bacteria 4342
207 Ga0495606_0000023 3300046507 Bacteria 265019
208 Ga0495606_0001114 3300046507 Bacteria 38407
209 Ga0495643_0000575 3300046522 Bacteria 45082
210 Ga0495643_0009758 3300046522 Bacteria 5937
211 Ga0495625_0053049 3300046660 Bacteria 2902
212 Ga0495671_0025415 3300046692 Bacteria 3078
213 Ga0495649_0000087 3300046694 Bacteria 79929
214 Ga0495649_0000588 3300046694 Bacteria 30503
215 Ga0496101_0034353 3300048904 Bacteria 3581
216 Ga0496102_0223539 3300048905 Bacteria 1775
217 Ga0496104_0009002 3300048907 Bacteria 8878
218 Ga0496104_0067608 3300048907 Bacteria 3395
219 Ga0496105_0034213 3300048908 Bacteria 4178
220 Ga0496106_0000415 3300048909 Bacteria 30247
221 Ga0496106_0169223 3300048909 Bacteria 1731
222 Ga0496107_0125563 3300048910 Bacteria 1892
223 Ga0496108_0000669 3300048911 Bacteria 26449
224 Ga0496109_0000717 3300048912 Bacteria 27607
225 Ga0496110_0054093 3300048913 Bacteria 3530
226 Ga0496111_0000510 3300048914 Bacteria 20086
227 Ga0496114_0021208 3300048917 Bacteria 5284
228 Ga0496114_0038691 3300048917 Bacteria 3947
229 Ga0496116_0005282 3300048919 Bacteria 12051
230 Ga0496118_0039140 3300048921 Bacteria 3788
231 Ga0496121_0019196 3300048924 Bacteria 6848
232 Ga0501032_0113588 3300049569 Bacteria 1792
233 Ga0501033_0025985 3300049570 Bacteria 4407
234 Ga0501036_0000844 3300049572 Bacteria 22816
235 Ga0501037_0029640 3300049573 Bacteria 4043
236 Ga0501038_0049218 3300049574 Bacteria 3645
237 Ga0501039_0030499 3300049575 Bacteria 4158
238 Ga0501039_0111211 3300049575 Bacteria 2141
239 Ga0501041_0007871 3300049577 Bacteria 6261
240 Ga0501042_0012142 3300049578 Bacteria 5828
241 Ga0501043_0061356 3300049579 Bacteria 2953
242 Ga0501046_0000023 3300049580 Bacteria 213965
243 Ga0501046_0014997 3300049580 Bacteria 6518
244 Ga0501048_0001043 3300049582 Bacteria 20761
245 Ga0501048_0029305 3300049582 Bacteria 3992
246 Ga0501070_0195410 3300049586 Bacteria 1662
247 Ga0501072_0029710 3300049588 Bacteria 4270
248 Ga0501072_0088842 3300049588 Bacteria 2452
249 Ga0501074_0111958 3300049590 Bacteria 1953
250 Ga0501075_0001292 3300049591 Bacteria 16229
251 Ga0501075_0021026 3300049591 Bacteria 4754
252 Ga0501076_0000177 3300049592 Bacteria 37612
253 Ga0501076_0038591 3300049592 Bacteria 3749
254 Ga0501077_0005211 3300049593 Bacteria 7898
255 Ga0501077_0007800 3300049593 Bacteria 6608
256 Ga0501079_0001638 3300049741 Bacteria 15943
257 Ga0501080_0020453 3300049742 Bacteria 6128
258 Ga0501081_0000501 3300049743 Bacteria 21960
259 Ga0501083_0091782 3300049744 Bacteria 2005
260 Ga0501035_0236548 3300049822 Bacteria 1555
261 Ga0501045_0000151 3300049824 Bacteria 37042
262 Ga0501045_0015531 3300049824 Bacteria 5401
263 Ga0501045_0092378 3300049824 Bacteria 2238
264 Ga0501045_0182550 3300049824 Bacteria 1563
265 nmdc:mga0k408_48582_c1 3300050493 Bacteria 2455
266 nmdc:mga09592_73041_c1 3300050508 Bacteria 2914
267 nmdc:mga09592_73467_c1 3300050508 Bacteria 2906
268 nmdc:mga06r32_11101_c1 3300050510 Bacteria 8106
269 nmdc:mga08y16_285489_c1 3300050511 Bacteria 1702
270 nmdc:mga0n895_117884_c1 3300050512 Bacteria 2674
271 Ga0500642_0083617 3300053130 Bacteria 1469
272 Ga0500616_0000062 3300053153 Bacteria 245744
273 Ga0500616_0012375 3300053153 Bacteria 4995
274 Ga0500634_0000065 3300053161 Bacteria 44046
275 Ga0501084_0023955 3300054114 Bacteria 5092
276 Ga0501082_0010476 3300060353 Bacteria 7977
277 2623501897 2622736605 Bacteria 4992138
278 2644412897 2643221674 Bacteria 3919126
279 2739287127 2738543020 Bacteria 5718238
280 2739292440 2738543021 Bacteria 5718241
281 2792460720 2791355048 Bacteria 5832535
282 2819427584 2818991318 Bacteria 5266538
283 2842808401 2842805378 Bacteria 5385175
284 2843748002 2843744320 Bacteria 5659202
285 2849561441 2849560528 Bacteria 5393480
286 2849574688 2849573788 Bacteria 5421256
287 2851153589 2851153111 Bacteria 5542585
288 2867352756 2867346516 Bacteria 7608576
289 2898329894 2898329390 Bacteria 5168154
290 2932401977 2932401849 Bacteria 4262978
291 2941487870 2941485952 Bacteria 3591484
292 8011352885 8011350971 Bacteria 6158957
293 Ga0099796_10000008
294 rootH1_10113883
295 Ga0065707_10081985
296 Ga0070676_10010293
297 Ga0070690_100016717
298 Ga0068869_100051313
299 Ga0070680_100004379
300 Ga0070680_100033141
301 Ga0070682_100134250
302 Ga0068868_100008391
303 Ga0070691_10002043
304 Ga0070668_100006772
305 Ga0070669_100170245
306 Ga0070659_100146518
307 Ga0070667_100000811
308 Ga0070667_100017985
309 Ga0070714_100000761
310 Ga0070713_100030511
311 Ga0070713_100105430
312 Ga0070711_100132914
313 Ga0070705_100000230
314 Ga0070700_100025366
315 Ga0070694_100008747
316 Ga0070708_100010142
317 Ga0070662_100003592
318 Ga0070681_10002518
319 Ga0070681_10004412
320 Ga0070681_10114531
321 Ga0070681_10154011
322 Ga0070699_100000750
323 Ga0070679_100002909
324 Ga0070679_100040110
325 Ga0070679_100133686
326 Ga0070695_100000466
327 Ga0070695_100002192
328 Ga0070696_100000987
329 Ga0070696_100096077
330 Ga0070665_100023609
331 Ga0068855_100004927
332 Ga0068855_100005820
333 Ga0068855_100302895
334 Ga0068857_100042920
335 Ga0068856_100011931
336 Ga0068856_100073176
337 Ga0068859_100005997
338 Ga0068859_100006116
339 Ga0068859_100413157
340 Ga0068864_100014745
341 Ga0068861_100005674
342 Ga0068861_100035153
343 Ga0068858_100007886
344 Ga0068860_100005939
345 Ga0068860_100007223
346 Ga0068862_100005786
347 Ga0081455_10000032
348 Ga0081539_10000007
349 Ga0081539_10097880
350 Ga0070717_10041101
351 Ga0070716_100081490
352 Ga0070712_100119032
353 Ga0097621_100081690
354 Ga0068871_100020573
355 Ga0075428_100004147
356 Ga0075428_100235543
357 Ga0075428_100245691
358 Ga0075431_100017302
359 Ga0075431_100048556
360 Ga0075434_100122358
361 Ga0097620_100005997
362 Ga0097620_100006116
363 Ga0097620_100413154
364 Ga0075435_100151825
365 Ga0099795_10000028
366 Ga0105240_10005147
367 Ga0105240_10047112
368 Ga0105240_10050493
369 Ga0111539_10018494
370 Ga0105245_10010506
371 Ga0114129_10248434
372 Ga0105238_10007189
373 Ga0105238_10041800
374 Ga0105249_10017298
375 Ga0105032_100507
376 Ga0099796_10000896
377 Ga0105239_10131209
378 Ga0105246_10043227
379 Ga0157371_10000648
380 Ga0157370_10000085
381 Ga0157370_10007223
382 Ga0157369_10004264
383 Ga0157369_10176397
384 Ga0157378_10026866
385 Ga0163162_10005988
386 Ga0157375_10028885
387 Ga0163163_10002017
388 Ga0157380_10058453
389 Ga0157379_10004403
390 Ga0157376_10000390
391 Ga0157376_10015038
392 Ga0163161_10024985
393 Ga0213876_10063178
394 Ga0207642_10089647
395 Ga0207699_10009668
396 Ga0207643_10012531
397 Ga0207707_10000940
398 Ga0207707_10001343
399 Ga0207707_10006849
400 Ga0207707_10010526
401 Ga0207695_10031842
402 Ga0207695_10125905
403 Ga0207693_10006671
404 Ga0207660_10002141
405 Ga0207660_10167415
406 Ga0207652_10009859
407 Ga0207652_10208943
408 Ga0207681_10133818
409 Ga0207694_10004616
410 Ga0207687_10023381
411 Ga0207700_10030523
412 Ga0207664_10011736
413 Ga0207706_10001579
414 Ga0207665_10028443
415 Ga0207691_10001752
416 Ga0207689_10071276
417 Ga0207667_10005821
418 Ga0207667_10043546
419 Ga0207667_10058364
420 Ga0207712_10007153
421 Ga0207658_10175448
422 Ga0207703_10024105
423 Ga0207708_10000424
424 Ga0207702_10042821
425 Ga0207648_10002375
426 Ga0207676_10060601
427 Ga0207674_10002162
428 Ga0207675_100001591
429 Ga0207675_100072657
430 Ga0207683_10109945
431 Ga0209179_1000002
432 Ga0209999_1005756
433 Ga0209982_1001464
434 Ga0210002_1000785
435 Ga0209983_1004051
436 Ga0209971_1002657
437 Ga0209998_10000120
438 Ga0268266_10034925
439 Ga0268265_10000787
440 Ga0268264_10023170
441 Ga0268264_10083039
442 Ga0265332_10062898
443 Ga0265328_10001376
444 Ga0265340_10002123
445 Ga0307408_100051616
446 Ga0307408_100084474
447 Ga0307408_100117533
448 Ga0316575_10006826
449 Ga0316576_10066825
450 Ga0316578_10000443
451 Ga0316577_10090228
452 Ga0307413_10025586
453 Ga0307406_10190030
454 Ga0307412_10047649
455 Ga0307416_100085753
456 Ga0307416_100120605
457 Ga0307416_100215119
458 Ga0307414_10019287
459 Ga0307415_100019764
460 Ga0307415_100040031
461 Ga0316583_10006270
462 Ga0316580_10038783
463 Ga0316586_1006160
464 Ga0316574_0024596
465 Ga0316574_0027767
466 Ga0316574_0041361
467 Ga0316574_0140222
468 Ga0373937_0070904
469 Ga0316582_0004725
470 Ga0316584_0047045
471 Ga0395898_0070621
472 Ga0395905_0335170
473 Ga0436365_0279751
474 Ga0436365_0749508
475 Ga0436360_0111342
476 Ga0436363_0349241
477 Ga0436363_1653393
478 Ga0436362_0042141
479 Ga0436362_0253826
480 Ga0436362_0366211
481 Ga0451577_0004842
482 Ga0451577_0009937
483 Ga0466972_0030818
484 Ga0466963_0001879
485 Ga0453684_0006583
486 Ga0453684_0077444
487 Ga0466957_0007988
488 Ga0466957_0196502
489 Ga0466959_0053433
490 Ga0466959_0068941
491 Ga0451576_0013009
492 Ga0451576_0043986
493 Ga0451576_0056846
494 Ga0466958_0015835
495 Ga0466967_0120264
496 Ga0495603_0173318
497 Ga0495594_0012999
498 Ga0495606_0000023
499 Ga0495606_0001114
500 Ga0495643_0000575
501 Ga0495643_0009758
502 Ga0495625_0053049
503 Ga0495671_0025415
504 Ga0495649_0000087
505 Ga0495649_0000588
506 Ga0496101_0034353
507 Ga0496102_0223539
508 Ga0496104_0009002
509 Ga0496104_0067608
510 Ga0496105_0034213
511 Ga0496106_0000415
512 Ga0496106_0169223
513 Ga0496107_0125563
514 Ga0496108_0000669
515 Ga0496109_0000717
516 Ga0496110_0054093
517 Ga0496111_0000510
518 Ga0496114_0021208
519 Ga0496114_0038691
520 Ga0496116_0005282
521 Ga0496118_0039140
522 Ga0496121_0019196
523 Ga0501032_0113588
524 Ga0501033_0025985
525 Ga0501036_0000844
526 Ga0501037_0029640
527 Ga0501038_0049218
528 Ga0501039_0030499
529 Ga0501039_0111211
530 Ga0501041_0007871
531 Ga0501042_0012142
532 Ga0501043_0061356
533 Ga0501046_0000023
534 Ga0501046_0014997
535 Ga0501048_0001043
536 Ga0501048_0029305
537 Ga0501070_0195410
538 Ga0501072_0029710
539 Ga0501072_0088842
540 Ga0501074_0111958
541 Ga0501075_0001292
542 Ga0501075_0021026
543 Ga0501076_0000177
544 Ga0501076_0038591
545 Ga0501077_0005211
546 Ga0501077_0007800
547 Ga0501079_0001638
548 Ga0501080_0020453
549 Ga0501081_0000501
550 Ga0501083_0091782
551 Ga0501035_0236548
552 Ga0501045_0000151
553 Ga0501045_0015531
554 Ga0501045_0092378
555 Ga0501045_0182550
556 nmdc:mga0k408_48582_c1
557 nmdc:mga09592_73041_c1
558 nmdc:mga09592_73467_c1
559 nmdc:mga06r32_11101_c1
560 nmdc:mga08y16_285489_c1
561 nmdc:mga0n895_117884_c1
562 Ga0500642_0083617
563 Ga0500616_0000062
564 Ga0500616_0012375
565 Ga0500634_0000065
566 Ga0501084_0023955
567 Ga0501082_0010476
568 2623501897
569 2644412897
570 2739287127
571 2739292440
572 2792460720
573 2819427584
574 2842808401
575 2843748002
576 2849561441
577 2849574688
578 2851153589
579 2867352756
580 2898329894
581 2932401977
582 2941487870
583 8011352885

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00108

Thiolase_N

Thiolase, N-terminal domain

52

320

0.92

PF02803

Thiolase_C

Thiolase, C-terminal domain

327

471

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
8bnr-assembly1.cif.gz_F escherichia coli anaerobic fatty acid beta oxidation trifunctional enzyme (anectfe) octameric complex 0.9578 6 424
8bnr-assembly1.cif.gz_F escherichia coli anaerobic fatty acid beta oxidation trifunctional enzyme (anectfe) octameric complex 0.9425 6 424
7xly-assembly1.cif.gz_D crystal structure of fada2 (rv0243) from the fatty acid metabolic pathway of mycobacterium tuberculosis 0.9346 6 425
6dv2-assembly2.cif.gz_C crystal structure of human mitochondrial trifunctional protein 0.9346 5 424
6dv2-assembly2.cif.gz_D crystal structure of human mitochondrial trifunctional protein 0.9331 5 424
ID Description Score Start End Superfamily
af_O86361_11_440_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9809 5 425 3.40.47.10
af_O86361_11_440_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9695 5 425 3.40.47.10
af_P76503_7_435_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9574 6 425 3.40.47.10
af_Q60587_46_472_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9463 1 425 3.40.47.10
af_P76503_7_435_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.9442 6 425 3.40.47.10
ID Description Score Start End GO Terms
AF-A0A0P9QYL1-F1-model_v4 Acetyl-CoA acetyltransferase 0.9939 307 425 GO:0005829
GO:0016747
AF-A0A2N1WYH2-F1-model_v4 deleted 0.9929 273 425
AF-A0A6G3XL70-F1-model_v4 Acetyl-CoA C-acyltransferase 0.9926 6 99 GO:0005829
GO:0016747
AF-A0A7Y8RLY0-F1-model_v4 Acetyl-CoA C-acyltransferase 0.9908 6 97 GO:0005829
GO:0016747
AF-A0A837B4M3-F1-model_v4 deleted 0.9881 3 122

Map