F390070

General Info

Members Datasets Scaffolds Average Seq Length
290 210 580 312

Family's Representative Sequence

Representative Sequence 3300053160|Ga0500633_0000538|Ga0500633_0000538_2628_3620
Length 330
Sequence MPADFLHNHRDFPSLLRIVADERRVQPVLVEKDYWIMHCLYGLQQMGMAFELKGGTSLSKGYRIINRFSEDIDIRIEPPAEMDVKTGPNHEKPAHREGRKKFYDWLAATIAINGIQSIERDPDFDNESYRSGGIRLFYPETTGTKSDLKAGVLLEAGFDTVAPNIAKDISSWAYDFASSRVELIDNRALAVLCYEPGYTLVEKLQTISTKYLKQQNTGQFPANFLRHNYDVYCLLDVPDVQDFIGSEAYLAHKARRFPKADNPYIADNPAFSLADAKILAVYVRAYERTAALYYHGRPSLRRSSRVSRRSHPASSGPHCSASTWPLGLDL

Samples

Sample ID Description Type Environment
1 3300053160 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 endosphere Metagenome Endosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
4 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
5 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
6 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
7 3300003215 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF Metagenome Endosphere
8 3300003300 Avena fatua rhizosphere microbial communities - H1_Rhizo_Litter_1 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
9 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
10 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
11 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
12 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
13 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
14 3300003374 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF Metagenome Endosphere
15 3300003693 Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
16 3300003735 Avena fatua rhizosphere microbial communities - H4_Bulk_Litter_23 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
17 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
18 3300003771 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 Metagenome Endosphere
19 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
20 3300004625 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMF_r2 Metagenome Endosphere
21 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
22 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
23 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
24 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
25 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
26 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
27 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
28 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
29 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
30 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
31 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
32 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
33 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
34 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
35 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
36 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
37 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
38 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
41 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
42 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
43 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
44 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
45 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
46 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
47 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
48 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
49 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
50 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
51 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
52 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
53 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
54 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
57 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
58 3300009092 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG Metagenome Rhizosphere
59 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
60 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
61 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
64 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
65 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
66 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
67 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
68 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
69 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
70 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
71 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
72 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
73 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
74 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
75 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
76 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
77 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
78 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
79 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
80 3300024227 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU4 Metagenome Rhizosphere
81 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
85 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
86 3300025295 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMF_r2 (SPAdes) (version 3) Metagenome Endosphere
87 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
88 3300025299 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mCL_r2 (SPAdes) (version 3) Metagenome Endosphere
89 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
90 3300025711 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
117 3300028017 Rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE4 Metagenome Rhizosphere
118 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
122 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
123 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
124 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
125 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
126 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
127 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
128 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
129 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
130 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
131 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
132 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
133 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
134 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
135 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
136 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
137 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
138 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
139 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
140 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
141 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
142 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
143 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
144 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
145 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
146 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
147 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
148 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
149 3300041503 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_8 MetaG Metagenome Unclassified
150 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
151 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
152 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
153 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
154 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
155 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
156 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
157 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
158 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
159 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
160 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
161 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
162 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
163 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
164 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
165 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
166 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
167 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
168 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
169 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
170 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
171 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
173 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
174 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
175 3300049703 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_A_2_control Metagenome Rhizosphere
176 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
177 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
178 3300050005 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E22_A_7_drought Metagenome Rhizosphere
179 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
180 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
181 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
182 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
183 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
184 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
185 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
186 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
187 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
188 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
189 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
190 3300053161 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 endosphere Metagenome Endosphere
191 3300053162 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 endosphere Metagenome Endosphere
192 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
193 3300053178 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 endosphere Metagenome Endosphere
194 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
195 2508501123 Mesorhizobium sp. WSM3626 Isolate Nodule
196 2510917020 Caulobacter sp. AP07 Isolate Rhizosphere
197 2516653077 Rhizobium acaciae WSM1481 Isolate Nodule
198 2582581294 Rhizobium sp. CF394 Isolate Rhizosphere
199 2643221627 Mesorhizobium sp. Root102 Isolate Unclassified
200 2643221634 Rhizobium sp. Root1203 Isolate Unclassified
201 2643221636 Rhizobium sp. Root1204 Isolate Unclassified
202 2821123053 Rhizobium cellulosilyticum 1193 Isolate Unclassified
203 2838661181 Rhizobium mongolense SEMIA 402 Isolate Nodule
204 2839138175 Delftia acidovorans B15 Isolate Rhizosphere
205 2857516855 Rhizobium sp. R-72456 Isolate Unclassified
206 2885374607 Bradyrhizobium sp. NAS96.2 Isolate Unclassified
207 2904456579 Variovorax sp. 2002 Isolate Unclassified
208 2919171160 Neorhizobium sp. 2083 Isolate Unclassified
209 2923556063 Rhizobium tibeticum 3740 Isolate Unclassified
210 8024486573 Rhizobium tubonense CCBAU 85046 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 93.1
Metatranscriptomes 1.38
Isolates 5.52

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 16.21
Nodule 1.38
Rhizoplane 1.03
Rhizosphere 67.24
Stem 0
Stem Tuber 0
Unclassified 2.41

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0500633_0000538 3300053160 Bacteria 6120
2 SwRhRL2b_contig_1732653 2162886007 Bacteria 6513
3 JGI24736J21556_1000877 3300001904 Bacteria 5563
4 JGI24741J21665_1001493 3300001915 Bacteria 6673
5 JGI24741J21665_1002660 3300001915 Bacteria 4558
6 JGI24740J21852_10006506 3300001979 Bacteria 4831
7 JGI24740J21852_10008726 3300001979 Bacteria 4023
8 JGI24740J21852_10055303 3300001979 Bacteria 1117
9 JGI24739J22299_10002533 3300001989 Bacteria 7043
10 JGI24739J22299_10023625 3300001989 Bacteria 2171
11 JGI25153J46596_10012865 3300003215 Bacteria 3577
12 Ga0006758J48902_1012953 3300003300 Bacteria 1712
13 rootH1_10046283 3300003316 Bacteria 5603
14 rootH2_10013071 3300003320 Bacteria 7495
15 rootH2_10140180 3300003320 Bacteria 1349
16 rootL2_10258982 3300003322 Bacteria 2813
17 rootL2_10342260 3300003322 Bacteria 1915
18 rootH1_10054292 3300003323 Bacteria 7664
19 JGI25160J50197_1006816 3300003354 Bacteria 4573
20 JGI25161J50226_1006278 3300003374 Bacteria 2175
21 Ga0032354_1036922 3300003693 Bacteria 2119
22 Ga0006780_1045773 3300003735 Bacteria 1191
23 Ga0055535_1007483 3300003761 Bacteria 2081
24 Ga0055526_1006960 3300003771 Bacteria 6002
25 Ga0055528_1000508 3300003790 Bacteria 30628
26 Ga0055543_1003490 3300004625 Bacteria 4611
27 Ga0058863_11859603 3300004799 Bacteria 1777
28 Ga0065165_1003570 3300005262 Bacteria 10748
29 Ga0065165_1008879 3300005262 Bacteria 4611
30 Ga0065714_10064913 3300005288 Bacteria 15566
31 Ga0065714_10108460 3300005288 Bacteria 1512
32 Ga0065714_10110835 3300005288 Bacteria 1480
33 Ga0065704_10070878 3300005289 Bacteria 15119
34 Ga0070658_10013915 3300005327 Bacteria 6459
35 Ga0070658_10080853 3300005327 Bacteria 2669
36 Ga0070680_100037511 3300005336 Bacteria 3916
37 Ga0070660_100254612 3300005339 Bacteria 1432
38 Ga0070692_10138557 3300005345 Bacteria 1375
39 Ga0070669_100331887 3300005353 Bacteria 1230
40 Ga0070673_100311214 3300005364 Bacteria 1389
41 Ga0070710_10020005 3300005437 Bacteria 3468
42 Ga0070662_100009366 3300005457 Bacteria 6401
43 Ga0070681_10119346 3300005458 Bacteria 2573
44 Ga0070707_100350434 3300005468 Bacteria 1434
45 Ga0070679_100000545 3300005530 Bacteria 31920
46 Ga0070679_100088201 3300005530 Bacteria 3089
47 Ga0068853_100171646 3300005539 Bacteria 1962
48 Ga0070672_100159159 3300005543 Bacteria 1872
49 Ga0070665_100228174 3300005548 Bacteria 1862
50 Ga0070665_100263360 3300005548 Bacteria 1725
51 Ga0068855_100009937 3300005563 Bacteria 11478
52 Ga0068855_100118203 3300005563 Bacteria 3036
53 Ga0068855_100223373 3300005563 Bacteria 2111
54 Ga0070664_100078791 3300005564 Bacteria 2834
55 Ga0068857_100051969 3300005577 Bacteria 3637
56 Ga0068857_100206146 3300005577 Bacteria 1793
57 Ga0068854_100055669 3300005578 Bacteria 2848
58 Ga0068856_100012492 3300005614 Bacteria 8220
59 Ga0068856_100073903 3300005614 Bacteria 3375
60 Ga0068852_100020527 3300005616 Bacteria 5255
61 Ga0068852_100068086 3300005616 Bacteria 3114
62 Ga0068859_100010215 3300005617 Bacteria 9448
63 Ga0068863_100000680 3300005841 Bacteria 34407
64 Ga0068860_100000479 3300005843 Bacteria 49770
65 Ga0068860_100363997 3300005843 Bacteria 1425
66 Ga0068862_100000118 3300005844 Bacteria 92548
67 Ga0075368_10020513 3300006042 Bacteria 2504
68 Ga0070716_100264606 3300006173 Bacteria 1178
69 Ga0075367_10008402 3300006178 Bacteria 5347
70 Ga0075366_10000551 3300006195 Bacteria 17465
71 Ga0075370_10000153 3300006353 Bacteria 23504
72 Ga0075370_10169014 3300006353 Bacteria 1285
73 Ga0068871_100370984 3300006358 Bacteria 1269
74 Ga0097620_100010215 3300006931 Bacteria 9448
75 Ga0099795_10020924 3300007788 Bacteria 2138
76 Ga0105251_10002291 3300009011 Bacteria 15173
77 Ga0105250_10004513 3300009092 Bacteria 6393
78 Ga0105240_10006481 3300009093 Bacteria 17191
79 Ga0105240_10040017 3300009093 Bacteria 6001
80 Ga0105240_10449108 3300009093 Bacteria 1443
81 Ga0105247_10005971 3300009101 Bacteria 7586
82 Ga0105243_10002421 3300009148 Bacteria 15622
83 Ga0105248_10340941 3300009177 Bacteria 1687
84 Ga0105237_10441547 3300009545 Bacteria 1307
85 Ga0105238_10093055 3300009551 Bacteria 3002
86 Ga0105238_10669921 3300009551 Bacteria 1048
87 Ga0105249_10000119 3300009553 Bacteria 107840
88 Ga0105249_10060169 3300009553 Bacteria 3484
89 Ga0099796_10013223 3300010159 Bacteria 2352
90 Ga0105239_10031883 3300010375 Bacteria 5791
91 Ga0157373_10006272 3300013100 Bacteria 8885
92 Ga0157371_10000119 3300013102 Bacteria 120350
93 Ga0157371_10047914 3300013102 Bacteria 3038
94 Ga0157371_10152205 3300013102 Bacteria 1650
95 Ga0157370_10019097 3300013104 Bacteria 6890
96 Ga0157370_10152548 3300013104 Bacteria 2149
97 Ga0157370_10225398 3300013104 Bacteria 1735
98 Ga0157370_10311450 3300013104 Bacteria 1453
99 Ga0157370_10482658 3300013104 Bacteria 1139
100 Ga0157369_10004027 3300013105 Bacteria 17418
101 Ga0157369_10082831 3300013105 Bacteria 3432
102 Ga0157369_10098014 3300013105 Bacteria 3127
103 Ga0157369_10245617 3300013105 Bacteria 1869
104 Ga0157374_10189124 3300013296 Bacteria 2013
105 Ga0163162_10186923 3300013306 Bacteria 2199
106 Ga0157372_10000157 3300013307 Bacteria 73930
107 Ga0157372_10009294 3300013307 Bacteria 10457
108 Ga0157380_10335177 3300014326 Bacteria 1408
109 Ga0182008_10000038 3300014497 Bacteria 129386
110 Ga0182008_10000044 3300014497 Bacteria 115149
111 Ga0163161_10002393 3300017792 Bacteria 13438
112 Ga0213872_10010467 3300021361 Bacteria 4414
113 Ga0213876_10010113 3300021384 Bacteria 5069
114 Ga0228598_1003551 3300024227 Bacteria 3352
115 Ga0209147_100281 3300025229 Bacteria 43878
116 Ga0209258_100354 3300025242 Bacteria 63709
117 Ga0209148_1000336 3300025254 Bacteria 63669
118 Ga0209565_1021811 3300025263 Bacteria 1333
119 Ga0209673_1000991 3300025273 Bacteria 34671
120 Ga0209673_1008902 3300025273 Bacteria 4415
121 Ga0209564_1002967 3300025295 Bacteria 12208
122 Ga0209758_1000589 3300025297 Bacteria 56586
123 Ga0209758_1003255 3300025297 Bacteria 15062
124 Ga0209256_1000966 3300025299 Bacteria 34661
125 Ga0207426_1007339 3300025302 Bacteria 4627
126 Ga0207696_1004086 3300025711 Bacteria 6393
127 Ga0207692_10043282 3300025898 Bacteria 2240
128 Ga0207710_10005614 3300025900 Bacteria 5395
129 Ga0207705_10024910 3300025909 Bacteria 4270
130 Ga0207705_10076329 3300025909 Bacteria 2436
131 Ga0207707_10097131 3300025912 Bacteria 2574
132 Ga0207695_10024598 3300025913 Bacteria 6768
133 Ga0207695_10087699 3300025913 Bacteria 3134
134 Ga0207695_10558360 3300025913 Bacteria 1026
135 Ga0207671_10042823 3300025914 Bacteria 3350
136 Ga0207693_10150209 3300025915 Bacteria 1832
137 Ga0207660_10035417 3300025917 Bacteria 3466
138 Ga0207660_10058143 3300025917 Bacteria 2771
139 Ga0207657_10005274 3300025919 Bacteria 13545
140 Ga0207657_10091309 3300025919 Bacteria 2540
141 Ga0207649_10247226 3300025920 Bacteria 1283
142 Ga0207652_10000428 3300025921 Bacteria 43769
143 Ga0207652_10033216 3300025921 Unclassified 4343
144 Ga0207652_10039053 3300025921 Bacteria 4027
145 Ga0207646_10304151 3300025922 Bacteria 1441
146 Ga0207694_10001098 3300025924 Bacteria 23443
147 Ga0207700_10106478 3300025928 Unclassified 2248
148 Ga0207706_10001208 3300025933 Bacteria 26106
149 Ga0207709_10000032 3300025935 Bacteria 324478
150 Ga0207691_10293927 3300025940 Bacteria 1397
151 Ga0207711_10384850 3300025941 Bacteria 1302
152 Ga0207679_10137589 3300025945 Bacteria 1969
153 Ga0207667_10017285 3300025949 Bacteria 8124
154 Ga0207667_10132238 3300025949 Bacteria 2570
155 Ga0207712_10000048 3300025961 Bacteria 160050
156 Ga0207712_10068724 3300025961 Bacteria 2539
157 Ga0207639_10053965 3300026041 Bacteria 3070
158 Ga0207702_10000716 3300026078 Bacteria 35620
159 Ga0207674_10014166 3300026116 Bacteria 8812
160 Ga0207674_10054983 3300026116 Bacteria 4050
161 Ga0207674_10184704 3300026116 Bacteria 2036
162 Ga0207698_10025169 3300026142 Bacteria 4188
163 Ga0207698_10042514 3300026142 Bacteria 3396
164 Ga0207698_10322092 3300026142 Bacteria 1448
165 Ga0209813_10009819 3300027866 Bacteria 2460
166 Ga0265356_1002785 3300028017 Bacteria 2265
167 Ga0268266_10093519 3300028379 Bacteria 2638
168 Ga0268266_10133092 3300028379 Bacteria 2226
169 Ga0268265_10000139 3300028380 Bacteria 92561
170 Ga0268264_10000585 3300028381 Bacteria 44270
171 Ga0307515_10049170 3300028794 Bacteria 6354
172 Ga0265338_10087630 3300028800 Unclassified 2586
173 Ga0265338_10147218 3300028800 Bacteria 1836
174 Ga0265330_10000306 3300031235 Bacteria 35320
175 Ga0265332_10000001 3300031238 Bacteria 863783
176 Ga0265325_10012480 3300031241 Bacteria 4858
177 Ga0265331_10025264 3300031250 Bacteria 3000
178 Ga0265331_10090090 3300031250 Bacteria 1418
179 Ga0265327_10000480 3300031251 Bacteria 70378
180 Ga0265327_10001881 3300031251 Bacteria 24292
181 Ga0265327_10002007 3300031251 Bacteria 22985
182 Ga0265316_10058096 3300031344 Bacteria 3015
183 Ga0307509_10006072 3300031507 Bacteria 16451
184 Ga0307408_100000230 3300031548 Bacteria 58926
185 Ga0307508_10010417 3300031616 Bacteria 8509
186 Ga0265314_10000022 3300031711 Bacteria 297299
187 Ga0307516_10000217 3300031730 Bacteria 74380
188 Ga0307406_10000956 3300031901 Bacteria 16157
189 Ga0307407_10000011 3300031903 Bacteria 174454
190 Ga0307412_10003910 3300031911 Bacteria 8296
191 Ga0307412_10007604 3300031911 Bacteria 6152
192 Ga0307414_10001101 3300032004 Bacteria 13814
193 Ga0307414_10128290 3300032004 Bacteria 1964
194 Ga0307414_10158970 3300032004 Bacteria 1792
195 Ga0307414_10303318 3300032004 Bacteria 1352
196 Ga0307510_10000044 3300033180 Bacteria 99994
197 Ga0373943_0163171 3300035170 Bacteria 1215
198 Ga0373935_0017731 3300035692 Bacteria 4325
199 Ga0373933_0212826 3300035724 Bacteria 1239
200 Ga0395899_0000837 3300037312 Bacteria 29680
201 Ga0395899_0033263 3300037312 Bacteria 3872
202 Ga0395900_0000243 3300037418 Bacteria 85908
203 Ga0395900_0053056 3300037418 Bacteria 4173
204 Ga0395898_0030475 3300037466 Bacteria 5397
205 Ga0395905_0088922 3300037471 Bacteria 2894
206 Ga0395901_0000636 3300038443 Bacteria 40673
207 Ga0395901_0062055 3300038443 Bacteria 3889
208 Ga0436365_0821311 3300039437 Bacteria 49389
209 Ga0436361_0248098 3300039447 Bacteria 14431
210 Ga0451847_0033751 3300041503 Bacteria 2415
211 Ga0453683_0028205 3300044673 Plasmid 3555
212 Ga0453683_0142207 3300044673 Unclassified 1515
213 Ga0466965_0180404 3300044683 Bacteria 1114
214 Ga0495606_0001215 3300046507 Bacteria 36112
215 Ga0495621_0059590 3300046539 Unclassified 1383
216 Ga0495622_0008216 3300046557 Bacteria 4836
217 Ga0495656_0000006 3300046615 Bacteria 237497
218 Ga0495611_0082275 3300046648 Bacteria 1482
219 Ga0495625_0000321 3300046660 Bacteria 72983
220 Ga0495625_0001499 3300046660 Bacteria 28047
221 Ga0495625_0038548 3300046660 Bacteria 3497
222 Ga0495659_0000453 3300046664 Bacteria 15269
223 Ga0495674_0062563 3300047319 Unclassified 3240
224 Ga0495687_018107 3300047443 Bacteria 3490
225 Ga0495681_0034471 3300047470 Bacteria 2522
226 Ga0496104_0073956 3300048907 Bacteria 3243
227 Ga0496105_0031278 3300048908 Bacteria 4364
228 Ga0496112_0005196 3300048915 Bacteria 11196
229 Ga0496117_0001278 3300048920 Bacteria 37300
230 Ga0496121_0010943 3300048924 Bacteria 10133
231 Ga0496121_0038995 3300048924 Bacteria 4195
232 Ga0496122_0089981 3300048925 Bacteria 2096
233 Ga0496122_0143161 3300048925 Bacteria 1491
234 Ga0496122_0177293 3300048925 Bacteria 1276
235 Ga0496124_0002530 3300048927 Bacteria 23729
236 Ga0496124_0004028 3300048927 Bacteria 17475
237 Ga0496124_0030170 3300048927 Bacteria 4816
238 Ga0496124_0199399 3300048927 Bacteria 1523
239 Ga0496125_0000034 3300048928 Bacteria 348231
240 Ga0496125_0000525 3300048928 Bacteria 66539
241 Ga0496125_0012463 3300048928 Bacteria 8438
242 Ga0496125_0087558 3300048928 Bacteria 2351
243 Ga0496125_0101483 3300048928 Bacteria 2117
244 Ga0496126_0021132 3300048929 Bacteria 6364
245 Ga0496126_0044541 3300048929 Bacteria 4085
246 Ga0496126_0060359 3300048929 Bacteria 3411
247 Ga0501032_0000011 3300049569 Bacteria 198158
248 Ga0501038_0000080 3300049574 Bacteria 81378
249 Ga0501039_0000281 3300049575 Bacteria 36334
250 Ga0501069_0074249 3300049585 Bacteria 1908
251 Ga0501219_002480 3300049703 Bacteria 1411
252 Ga0501241_002155 3300049758 Bacteria 3845
253 Ga0501044_0003601 3300049823 Bacteria 17438
254 Ga0501284_00050 3300050005 Bacteria 43535
255 nmdc:mga0k408_733_c1 3300050493 Bacteria 17979
256 nmdc:mga04h51_5008_c1 3300050495 Bacteria 2503
257 nmdc:mga07m45_104_c1 3300050496 Bacteria 33217
258 nmdc:mga07m45_136881_c1 3300050496 Bacteria 1418
259 nmdc:mga07m45_165779_c1 3300050496 Bacteria 1283
260 Ga0500578_0282698 3300053086 Bacteria 989
261 Ga0500643_004975 3300053087 Bacteria 5839
262 Ga0500651_0005003 3300053093 Bacteria 7515
263 Ga0500641_0053771 3300053096 Bacteria 1663
264 Ga0500608_066147 3300053122 Bacteria 1723
265 Ga0500618_000527 3300053125 Bacteria 23980
266 Ga0500618_022682 3300053125 Bacteria 1524
267 Ga0500618_023136 3300053125 Bacteria 1506
268 Ga0500559_0000544 3300053136 Bacteria 26083
269 Ga0500604_0042647 3300053151 Unclassified 1376
270 Ga0500634_0121718 3300053161 Bacteria 1268
271 Ga0500638_068600 3300053162 Bacteria 1697
272 Ga0500636_0002344 3300053177 Bacteria 10506
273 Ga0500637_0046340 3300053178 Bacteria 2468
274 Ga0500645_005159 3300053730 Bacteria 4867
275 2509118291 2508501123 Bacteria 6283661
276 2511124049 2510917020 Bacteria 5657507
277 2517042867 2516653077 Bacteria 7555578
278 2585203208 2582581294 Bacteria 6626667
279 2644153835 2643221627 Bacteria 6761570
280 2644193950 2643221634 Bacteria 6705461
281 2644203740 2643221636 Bacteria 6583769
282 2821130382 2821123053 Bacteria 7836056
283 2838667463 2838661181 Bacteria 7385261
284 2839144626 2839138175 Bacteria 6549354
285 2857522861 2857516855 Bacteria 7787325
286 2885381263 2885374607 Bacteria 8927485
287 2904457273 2904456579 Bacteria 6819253
288 2919177351 2919171160 Bacteria 6499771
289 2923560357 2923556063 Bacteria 6793593
290 8024487342 8024486573 Bacteria 6540512
291 Ga0500633_0000538
292 SwRhRL2b_contig_1732653
293 JGI24736J21556_1000877
294 JGI24741J21665_1001493
295 JGI24741J21665_1002660
296 JGI24740J21852_10006506
297 JGI24740J21852_10008726
298 JGI24740J21852_10055303
299 JGI24739J22299_10002533
300 JGI24739J22299_10023625
301 JGI25153J46596_10012865
302 Ga0006758J48902_1012953
303 rootH1_10046283
304 rootH2_10013071
305 rootH2_10140180
306 rootL2_10258982
307 rootL2_10342260
308 rootH1_10054292
309 JGI25160J50197_1006816
310 JGI25161J50226_1006278
311 Ga0032354_1036922
312 Ga0006780_1045773
313 Ga0055535_1007483
314 Ga0055526_1006960
315 Ga0055528_1000508
316 Ga0055543_1003490
317 Ga0058863_11859603
318 Ga0065165_1003570
319 Ga0065165_1008879
320 Ga0065714_10064913
321 Ga0065714_10108460
322 Ga0065714_10110835
323 Ga0065704_10070878
324 Ga0070658_10013915
325 Ga0070658_10080853
326 Ga0070680_100037511
327 Ga0070660_100254612
328 Ga0070692_10138557
329 Ga0070669_100331887
330 Ga0070673_100311214
331 Ga0070710_10020005
332 Ga0070662_100009366
333 Ga0070681_10119346
334 Ga0070707_100350434
335 Ga0070679_100000545
336 Ga0070679_100088201
337 Ga0068853_100171646
338 Ga0070672_100159159
339 Ga0070665_100228174
340 Ga0070665_100263360
341 Ga0068855_100009937
342 Ga0068855_100118203
343 Ga0068855_100223373
344 Ga0070664_100078791
345 Ga0068857_100051969
346 Ga0068857_100206146
347 Ga0068854_100055669
348 Ga0068856_100012492
349 Ga0068856_100073903
350 Ga0068852_100020527
351 Ga0068852_100068086
352 Ga0068859_100010215
353 Ga0068863_100000680
354 Ga0068860_100000479
355 Ga0068860_100363997
356 Ga0068862_100000118
357 Ga0075368_10020513
358 Ga0070716_100264606
359 Ga0075367_10008402
360 Ga0075366_10000551
361 Ga0075370_10000153
362 Ga0075370_10169014
363 Ga0068871_100370984
364 Ga0097620_100010215
365 Ga0099795_10020924
366 Ga0105251_10002291
367 Ga0105250_10004513
368 Ga0105240_10006481
369 Ga0105240_10040017
370 Ga0105240_10449108
371 Ga0105247_10005971
372 Ga0105243_10002421
373 Ga0105248_10340941
374 Ga0105237_10441547
375 Ga0105238_10093055
376 Ga0105238_10669921
377 Ga0105249_10000119
378 Ga0105249_10060169
379 Ga0099796_10013223
380 Ga0105239_10031883
381 Ga0157373_10006272
382 Ga0157371_10000119
383 Ga0157371_10047914
384 Ga0157371_10152205
385 Ga0157370_10019097
386 Ga0157370_10152548
387 Ga0157370_10225398
388 Ga0157370_10311450
389 Ga0157370_10482658
390 Ga0157369_10004027
391 Ga0157369_10082831
392 Ga0157369_10098014
393 Ga0157369_10245617
394 Ga0157374_10189124
395 Ga0163162_10186923
396 Ga0157372_10000157
397 Ga0157372_10009294
398 Ga0157380_10335177
399 Ga0182008_10000038
400 Ga0182008_10000044
401 Ga0163161_10002393
402 Ga0213872_10010467
403 Ga0213876_10010113
404 Ga0228598_1003551
405 Ga0209147_100281
406 Ga0209258_100354
407 Ga0209148_1000336
408 Ga0209565_1021811
409 Ga0209673_1000991
410 Ga0209673_1008902
411 Ga0209564_1002967
412 Ga0209758_1000589
413 Ga0209758_1003255
414 Ga0209256_1000966
415 Ga0207426_1007339
416 Ga0207696_1004086
417 Ga0207692_10043282
418 Ga0207710_10005614
419 Ga0207705_10024910
420 Ga0207705_10076329
421 Ga0207707_10097131
422 Ga0207695_10024598
423 Ga0207695_10087699
424 Ga0207695_10558360
425 Ga0207671_10042823
426 Ga0207693_10150209
427 Ga0207660_10035417
428 Ga0207660_10058143
429 Ga0207657_10005274
430 Ga0207657_10091309
431 Ga0207649_10247226
432 Ga0207652_10000428
433 Ga0207652_10033216
434 Ga0207652_10039053
435 Ga0207646_10304151
436 Ga0207694_10001098
437 Ga0207700_10106478
438 Ga0207706_10001208
439 Ga0207709_10000032
440 Ga0207691_10293927
441 Ga0207711_10384850
442 Ga0207679_10137589
443 Ga0207667_10017285
444 Ga0207667_10132238
445 Ga0207712_10000048
446 Ga0207712_10068724
447 Ga0207639_10053965
448 Ga0207702_10000716
449 Ga0207674_10014166
450 Ga0207674_10054983
451 Ga0207674_10184704
452 Ga0207698_10025169
453 Ga0207698_10042514
454 Ga0207698_10322092
455 Ga0209813_10009819
456 Ga0265356_1002785
457 Ga0268266_10093519
458 Ga0268266_10133092
459 Ga0268265_10000139
460 Ga0268264_10000585
461 Ga0307515_10049170
462 Ga0265338_10087630
463 Ga0265338_10147218
464 Ga0265330_10000306
465 Ga0265332_10000001
466 Ga0265325_10012480
467 Ga0265331_10025264
468 Ga0265331_10090090
469 Ga0265327_10000480
470 Ga0265327_10001881
471 Ga0265327_10002007
472 Ga0265316_10058096
473 Ga0307509_10006072
474 Ga0307408_100000230
475 Ga0307508_10010417
476 Ga0265314_10000022
477 Ga0307516_10000217
478 Ga0307406_10000956
479 Ga0307407_10000011
480 Ga0307412_10003910
481 Ga0307412_10007604
482 Ga0307414_10001101
483 Ga0307414_10128290
484 Ga0307414_10158970
485 Ga0307414_10303318
486 Ga0307510_10000044
487 Ga0373943_0163171
488 Ga0373935_0017731
489 Ga0373933_0212826
490 Ga0395899_0000837
491 Ga0395899_0033263
492 Ga0395900_0000243
493 Ga0395900_0053056
494 Ga0395898_0030475
495 Ga0395905_0088922
496 Ga0395901_0000636
497 Ga0395901_0062055
498 Ga0436365_0821311
499 Ga0436361_0248098
500 Ga0451847_0033751
501 Ga0453683_0028205
502 Ga0453683_0142207
503 Ga0466965_0180404
504 Ga0495606_0001215
505 Ga0495621_0059590
506 Ga0495622_0008216
507 Ga0495656_0000006
508 Ga0495611_0082275
509 Ga0495625_0000321
510 Ga0495625_0001499
511 Ga0495625_0038548
512 Ga0495659_0000453
513 Ga0495674_0062563
514 Ga0495687_018107
515 Ga0495681_0034471
516 Ga0496104_0073956
517 Ga0496105_0031278
518 Ga0496112_0005196
519 Ga0496117_0001278
520 Ga0496121_0010943
521 Ga0496121_0038995
522 Ga0496122_0089981
523 Ga0496122_0143161
524 Ga0496122_0177293
525 Ga0496124_0002530
526 Ga0496124_0004028
527 Ga0496124_0030170
528 Ga0496124_0199399
529 Ga0496125_0000034
530 Ga0496125_0000525
531 Ga0496125_0012463
532 Ga0496125_0087558
533 Ga0496125_0101483
534 Ga0496126_0021132
535 Ga0496126_0044541
536 Ga0496126_0060359
537 Ga0501032_0000011
538 Ga0501038_0000080
539 Ga0501039_0000281
540 Ga0501069_0074249
541 Ga0501219_002480
542 Ga0501241_002155
543 Ga0501044_0003601
544 Ga0501284_00050
545 nmdc:mga0k408_733_c1
546 nmdc:mga04h51_5008_c1
547 nmdc:mga07m45_104_c1
548 nmdc:mga07m45_136881_c1
549 nmdc:mga07m45_165779_c1
550 Ga0500578_0282698
551 Ga0500643_004975
552 Ga0500651_0005003
553 Ga0500641_0053771
554 Ga0500608_066147
555 Ga0500618_000527
556 Ga0500618_022682
557 Ga0500618_023136
558 Ga0500559_0000544
559 Ga0500604_0042647
560 Ga0500634_0121718
561 Ga0500638_068600
562 Ga0500636_0002344
563 Ga0500637_0046340
564 Ga0500645_005159
565 2509118291
566 2511124049
567 2517042867
568 2585203208
569 2644153835
570 2644193950
571 2644203740
572 2821130382
573 2838667463
574 2839144626
575 2857522861
576 2885381263
577 2904457273
578 2919177351
579 2923560357
580 8024487342

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF08843

AbiEii

Nucleotidyl transferase AbiEii toxin, Type IV TA system

38

299

0.82

Structural Annotation

Top 5 Hits

ID Description Score Start End
5kqj-assembly1.cif.gz_A solution structure of antibiotic-resistance factor ant(2'')-ia reveals substrate-regulated conformation dynamics 0.5944 22 253
5kqj-assembly1.cif.gz_A solution structure of antibiotic-resistance factor ant(2'')-ia reveals substrate-regulated conformation dynamics 0.5534 22 253
5cfu-assembly1.cif.gz_A "crystal structure of ant(2"")-ia in complex with adenylyl-2""-tobramycin" 0.5482 31 253
5cfu-assembly1.cif.gz_A "crystal structure of ant(2"")-ia in complex with adenylyl-2""-tobramycin" 0.5322 31 253
7dsm-assembly1.cif.gz_A anthranilate phosphoribosyltransferase from saccharomyces cerevisiae 0.491 195 254
ID Description Score Start End Superfamily
af_P71626_26_136_3.10.450.620 Alpha Beta;Roll;Nuclear Transport Factor 2; Chain: A,;JHP933, nucleotidyltransferase-like core domain 0.5718 35 159 3.10.450.620
af_P71626_26_136_3.10.450.620 Alpha Beta;Roll;Nuclear Transport Factor 2; Chain: A,;JHP933, nucleotidyltransferase-like core domain 0.5488 35 159 3.10.450.620
5cfuA00 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2; 0.5482 31 253 3.30.460.40
af_Q21210_706_990_1.25.10.10 Mainly Alpha;Alpha Horseshoe;Leucine-rich Repeat Variant;Leucine-rich Repeat Variant 0.5389 195 312 1.25.10.10
5cfuA00 Alpha Beta;2-Layer Sandwich;Beta Polymerase; domain 2; 0.5322 31 253 3.30.460.40
ID Description Score Start End GO Terms
AF-A0A1I2RE04-F1-model_v4 Nucleotidyl transferase AbiEii toxin, Type IV TA system 0.9903 1 312 GO:0016740
AF-A0A0F7KMN0-F1-model_v4 Uncharacterized protein 0.9801 1 167
AF-A0A1S7SIF5-F1-model_v4 Uncharacterized protein 0.9738 194 311
AF-A0A7T9HZK3-F1-model_v4 deleted 0.9732 1 312
AF-A0A1G4XZ76-F1-model_v4 Nucleotidyl transferase AbiEii toxin, Type IV TA system 0.9728 1 177 GO:0016740

Map