F389890

General Info

Members Datasets Scaffolds Average Seq Length
290 203 580 325

Family's Representative Sequence

Representative Sequence 3300039437|Ga0436365_0255975|Ga0436365_0255975_213_1325
Length 370
Sequence LAADAPREADRLETTKNGGLLLPFATSGIFVHAWNQDDGRFDPEATVRRRDVLKYMGGAAVLSAGVKPVAADAAYPDHPVRILAGFSAGGGVDITARLIGQWLSERLGQPFITENRTGADGNIATEAVVKASPDGYTLLLATLPNAVNASLYPKLSFVFLRDVAPVAGVIRVPMVVLVQPSVPAASIAELITYAKANPGKINMASAGIGSAPHMAGELFNAMAGTNMVHIPYRGRGPAMADLLGGQVQALFAAAPGTTDYIKSGKLRALAVTTVSHAEVLRDLPTIAASVPGYDASQWYGIAAPAKTPPEIVERLNKEINAAFADATMQSRFAAIGGDVMPGSPADFGKLVADETGKWAGVVKFAGLKAE

Samples

Sample ID Description Type Environment
1 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
2 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
3 3300003659 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
4 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
7 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
10 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
11 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
12 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
13 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
16 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
23 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
26 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
29 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
30 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
31 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
32 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
33 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
34 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
35 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
36 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
37 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
38 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
39 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
40 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
41 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
42 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
47 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
48 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
49 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
50 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
51 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
52 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
53 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
58 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
66 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
67 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
68 3300024225 Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZU5 Metagenome Rhizosphere
69 3300025297 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mMF (SPAdes) (version 2) Metagenome Endosphere
70 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
107 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
108 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
109 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
110 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
111 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
112 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
113 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
114 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
115 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
116 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
117 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
118 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
119 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
120 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
121 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
122 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
123 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
124 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
125 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
126 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
127 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
128 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
129 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
130 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
131 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
132 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
133 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
134 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
135 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
136 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
137 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
138 3300046518 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 rhizosphere Metagenome Rhizosphere
139 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
140 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
141 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
142 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
143 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
144 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
145 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
146 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
147 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
148 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
149 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
150 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
151 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
152 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
153 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
154 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
155 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
156 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
157 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
158 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
159 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
160 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
161 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
162 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
163 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
164 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
165 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
166 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
167 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
168 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
169 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
170 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
171 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
172 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
173 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
174 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
175 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
176 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
177 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
178 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
180 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
181 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
182 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
183 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
184 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
185 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
186 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
187 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
188 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
189 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
190 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
191 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
192 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
193 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
194 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
195 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
196 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
197 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
198 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
199 3300053725 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 endosphere Metagenome Endosphere
200 3300053737 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 endosphere Metagenome Endosphere
201 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
202 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
203 2513237141 Bradyrhizobium sp. TV2a.2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 99.66
Metatranscriptomes 0
Isolates 0.34

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 6.21
Nodule 0.34
Rhizoplane 8.62
Rhizosphere 81.38
Stem 0
Stem Tuber 0
Unclassified 0.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0436365_0255975 3300039437 Bacteria 2405
2 JGI25406J46586_10000231 3300003203 Bacteria 24730
3 JGI25404J52841_10010060 3300003659 Bacteria 2030
4 JGI25405J52794_10028103 3300003911 Bacteria 1160
5 Ga0065707_10138425 3300005295 Bacteria 1806
6 Ga0070661_100063471 3300005344 Bacteria 2713
7 Ga0070661_100080913 3300005344 Bacteria 2398
8 Ga0070661_100106637 3300005344 Bacteria 2089
9 Ga0070671_100043978 3300005355 Bacteria 3711
10 Ga0070659_100027749 3300005366 Bacteria 4365
11 Ga0070714_100342515 3300005435 Bacteria 1402
12 Ga0070713_100063505 3300005436 Bacteria 3096
13 Ga0070713_100078163 3300005436 Bacteria 2816
14 Ga0070710_10000080 3300005437 Bacteria 43770
15 Ga0070711_100003708 3300005439 Bacteria 8949
16 Ga0070663_100049809 3300005455 Bacteria 2977
17 Ga0070663_100056517 3300005455 Bacteria 2812
18 Ga0070663_100064680 3300005455 Bacteria 2644
19 Ga0070678_100094509 3300005456 Bacteria 2301
20 Ga0070678_100250271 3300005456 Bacteria 1485
21 Ga0070662_100074250 3300005457 Bacteria 2515
22 Ga0070681_10167755 3300005458 Bacteria 2118
23 Ga0068867_100026379 3300005459 Bacteria 4171
24 Ga0068867_100346289 3300005459 Bacteria 1239
25 Ga0070706_100131880 3300005467 Bacteria 2332
26 Ga0070707_100198144 3300005468 Bacteria 1957
27 Ga0070698_100002415 3300005471 Bacteria 20572
28 Ga0070699_100003900 3300005518 Bacteria 13178
29 Ga0070699_100092750 3300005518 Bacteria 2642
30 Ga0070697_100080426 3300005536 Bacteria 2685
31 Ga0070697_100440805 3300005536 Bacteria 1134
32 Ga0068853_100196747 3300005539 Bacteria 1833
33 Ga0070672_100063454 3300005543 Bacteria 2917
34 Ga0070693_100080375 3300005547 Bacteria 1942
35 Ga0070665_100115717 3300005548 Bacteria 2684
36 Ga0068855_100015909 3300005563 Bacteria 9050
37 Ga0070664_100016174 3300005564 Bacteria 6114
38 Ga0070664_100078941 3300005564 Bacteria 2832
39 Ga0068857_100086490 3300005577 Bacteria 2803
40 Ga0068854_100291067 3300005578 Bacteria 1318
41 Ga0068856_100286285 3300005614 Bacteria 1665
42 Ga0070702_100151989 3300005615 Bacteria 1487
43 Ga0068852_100036275 3300005616 Bacteria 4124
44 Ga0068864_100145795 3300005618 Bacteria 2140
45 Ga0068858_100185217 3300005842 Bacteria 1966
46 Ga0068860_100000927 3300005843 Bacteria 32568
47 Ga0068860_100337740 3300005843 Bacteria 1481
48 Ga0081455_10025913 3300005937 Bacteria 5404
49 Ga0081455_10031832 3300005937 Bacteria 4764
50 Ga0081455_10072176 3300005937 Bacteria 2859
51 Ga0081455_10254836 3300005937 Bacteria 1281
52 Ga0081540_1004295 3300005983 Bacteria 10918
53 Ga0081540_1012965 3300005983 Bacteria 5446
54 Ga0081540_1019947 3300005983 Bacteria 4051
55 Ga0081540_1021916 3300005983 Bacteria 3785
56 Ga0081540_1038286 3300005983 Bacteria 2529
57 Ga0081540_1060499 3300005983 Bacteria 1811
58 Ga0081539_10000203 3300005985 Bacteria 138096
59 Ga0081539_10002117 3300005985 Bacteria 29401
60 Ga0070717_10003662 3300006028 Bacteria 11032
61 Ga0070717_10027888 3300006028 Bacteria 4515
62 Ga0070717_10149868 3300006028 Bacteria 2017
63 Ga0075365_10032283 3300006038 Bacteria 3364
64 Ga0075365_10137149 3300006038 Bacteria 1696
65 Ga0075365_10177200 3300006038 Bacteria 1490
66 Ga0070716_100006412 3300006173 Bacteria 5746
67 Ga0070716_100141797 3300006173 Bacteria 1533
68 Ga0070712_100002912 3300006175 Bacteria 10607
69 Ga0070712_100286097 3300006175 Bacteria 1329
70 Ga0075428_100021594 3300006844 Bacteria 7127
71 Ga0075428_100045761 3300006844 Bacteria 4808
72 Ga0075431_100503249 3300006847 Bacteria 1202
73 Ga0075433_10045448 3300006852 Bacteria 3818
74 Ga0075434_100122747 3300006871 Bacteria 2614
75 Ga0075429_100003955 3300006880 Bacteria 12668
76 Ga0075429_100444934 3300006880 Bacteria 1135
77 Ga0099794_10005856 3300007265 Bacteria 4957
78 Ga0111539_10064731 3300009094 Bacteria 4324
79 Ga0111539_10400068 3300009094 Bacteria 1600
80 Ga0111539_10481267 3300009094 Bacteria 1446
81 Ga0105245_10022076 3300009098 Bacteria 5587
82 Ga0105247_10030122 3300009101 Bacteria 3290
83 Ga0114129_10069443 3300009147 Unclassified 4911
84 Ga0114129_10497976 3300009147 Bacteria 1592
85 Ga0114129_10584498 3300009147 Bacteria 1449
86 Ga0114129_10691407 3300009147 Bacteria 1312
87 Ga0105243_10145510 3300009148 Bacteria 2027
88 Ga0105243_10289735 3300009148 Bacteria 1479
89 Ga0105248_10028293 3300009177 Bacteria 6244
90 Ga0105248_10292637 3300009177 Bacteria 1834
91 Ga0105237_10028481 3300009545 Bacteria 5690
92 Ga0105237_10085799 3300009545 Bacteria 3138
93 Ga0105239_10039860 3300010375 Bacteria 5146
94 Ga0105239_10056068 3300010375 Bacteria 4322
95 Ga0105239_10127343 3300010375 Bacteria 2831
96 Ga0105246_10029013 3300011119 Bacteria 3639
97 Ga0157370_10045776 3300013104 Bacteria 4197
98 Ga0157369_10020900 3300013105 Bacteria 7319
99 Ga0157374_10019172 3300013296 Bacteria 6052
100 Ga0157378_10046571 3300013297 Bacteria 3854
101 Ga0157378_10206955 3300013297 Bacteria 1858
102 Ga0163162_10056226 3300013306 Bacteria 3963
103 Ga0163162_10229577 3300013306 Bacteria 1986
104 Ga0163162_10231596 3300013306 Bacteria 1978
105 Ga0157372_10030704 3300013307 Bacteria 5880
106 Ga0163163_10045162 3300014325 Bacteria 4324
107 Ga0157379_10205777 3300014968 Bacteria 1780
108 Ga0157376_10015621 3300014969 Bacteria 5741
109 Ga0157376_10028613 3300014969 Bacteria 4431
110 Ga0224572_1025551 3300024225 Bacteria 1133
111 Ga0209758_1000580 3300025297 Bacteria 57122
112 Ga0207692_10006827 3300025898 Bacteria 4645
113 Ga0207642_10039560 3300025899 Bacteria 2050
114 Ga0207710_10110297 3300025900 Bacteria 1306
115 Ga0207699_10047687 3300025906 Bacteria 2513
116 Ga0207645_10050574 3300025907 Bacteria 2654
117 Ga0207645_10289063 3300025907 Bacteria 1090
118 Ga0207684_10021025 3300025910 Bacteria 5572
119 Ga0207693_10007097 3300025915 Bacteria 9243
120 Ga0207693_10099178 3300025915 Bacteria 2284
121 Ga0207649_10069589 3300025920 Bacteria 2242
122 Ga0207649_10293266 3300025920 Bacteria 1187
123 Ga0207646_10219982 3300025922 Bacteria 1715
124 Ga0207681_10125956 3300025923 Bacteria 1886
125 Ga0207681_10164700 3300025923 Bacteria 1675
126 Ga0207694_10057963 3300025924 Bacteria 3012
127 Ga0207694_10106554 3300025924 Bacteria 2226
128 Ga0207659_10060973 3300025926 Bacteria 2717
129 Ga0207664_10044146 3300025929 Bacteria 3490
130 Ga0207644_10043012 3300025931 Bacteria 3204
131 Ga0207690_10090940 3300025932 Bacteria 2156
132 Ga0207706_10009342 3300025933 Bacteria 9003
133 Ga0207706_10038719 3300025933 Bacteria 4229
134 Ga0207709_10035983 3300025935 Bacteria 2931
135 Ga0207709_10126809 3300025935 Bacteria 1733
136 Ga0207704_10033045 3300025938 Bacteria 2937
137 Ga0207665_10038933 3300025939 Bacteria 3168
138 Ga0207665_10079918 3300025939 Bacteria 2249
139 Ga0207665_10332160 3300025939 Bacteria 1143
140 Ga0207691_10136253 3300025940 Bacteria 2165
141 Ga0207691_10355276 3300025940 Bacteria 1253
142 Ga0207711_10024930 3300025941 Bacteria 5017
143 Ga0207711_10264047 3300025941 Bacteria 1583
144 Ga0207661_10489237 3300025944 Bacteria 1124
145 Ga0207679_10148699 3300025945 Bacteria 1903
146 Ga0207679_10192819 3300025945 Bacteria 1696
147 Ga0207651_10203561 3300025960 Bacteria 1588
148 Ga0207712_10102383 3300025961 Bacteria 2132
149 Ga0207712_10395510 3300025961 Bacteria 1160
150 Ga0207640_10061118 3300025981 Bacteria 2494
151 Ga0207677_10020759 3300026023 Bacteria 3997
152 Ga0207703_10212476 3300026035 Bacteria 1726
153 Ga0207678_10017210 3300026067 Bacteria 6346
154 Ga0207641_10249303 3300026088 Bacteria 1658
155 Ga0207648_10014258 3300026089 Bacteria 7348
156 Ga0207676_10100811 3300026095 Bacteria 2393
157 Ga0207675_100070092 3300026118 Bacteria 3277
158 Ga0207683_10125592 3300026121 Bacteria 2305
159 Ga0207683_10155554 3300026121 Bacteria 2065
160 Ga0207698_10027733 3300026142 Bacteria 4026
161 Ga0268264_10000050 3300028381 Bacteria 323697
162 Ga0268264_10179702 3300028381 Bacteria 1920
163 Ga0268264_10441602 3300028381 Bacteria 1259
164 Ga0265332_10002332 3300031238 Bacteria 9680
165 Ga0265325_10032636 3300031241 Bacteria 2779
166 Ga0265340_10011019 3300031247 Bacteria 4820
167 Ga0265339_10058442 3300031249 Bacteria 2082
168 Ga0265331_10026926 3300031250 Bacteria 2887
169 Ga0307508_10220004 3300031616 Bacteria 1499
170 Ga0265314_10078057 3300031711 Bacteria 2194
171 Ga0307516_10061782 3300031730 Bacteria 3633
172 Ga0373936_0012035 3300035113 Bacteria 3284
173 Ga0373936_0081769 3300035113 Bacteria 1345
174 Ga0373955_0009009 3300035172 Bacteria 4658
175 Ga0373924_0074949 3300035410 Bacteria 1432
176 Ga0373931_0181771 3300035691 Bacteria 1246
177 Ga0373927_0005986 3300035695 Bacteria 8328
178 Ga0373927_0017925 3300035695 Bacteria 4657
179 Ga0373947_0015963 3300035725 Bacteria 4314
180 Ga0373947_0250691 3300035725 Bacteria 1171
181 Ga0373937_0130961 3300036401 Bacteria 2343
182 Ga0373937_0243684 3300036401 Bacteria 1694
183 Ga0373925_0181285 3300037068 Bacteria 1667
184 Ga0373925_0193537 3300037068 Bacteria 1614
185 Ga0395900_0013046 3300037418 Bacteria 8494
186 Ga0395900_0416944 3300037418 Bacteria 1304
187 Ga0395898_0113371 3300037466 Bacteria 2598
188 Ga0395901_0203570 3300038443 Bacteria 2074
189 Ga0436365_0068175 3300039437 Bacteria 3054
190 Ga0436361_1084710 3300039447 Bacteria 1279
191 Ga0439453_0001074 3300041408 Bacteria 3380
192 Ga0466968_0060282 3300044735 Bacteria 1636
193 Ga0466957_0033038 3300044842 Bacteria 3102
194 Ga0466959_0027486 3300045049 Bacteria 4220
195 Ga0495592_0141677 3300046454 Bacteria 1671
196 Ga0495603_0108842 3300046455 Bacteria 1617
197 Ga0495651_0025843 3300046462 Bacteria 4571
198 Ga0495653_0033785 3300046463 Bacteria 4049
199 Ga0495582_0064583 3300046473 Bacteria 2021
200 Ga0495662_0058915 3300046476 Bacteria 1855
201 Ga0495606_0000992 3300046507 Bacteria 41375
202 Ga0495608_0019191 3300046511 Bacteria 4708
203 Ga0495631_0062134 3300046518 Bacteria 1619
204 Ga0495632_0058079 3300046519 Bacteria 1887
205 Ga0495665_0020211 3300046531 Bacteria 3578
206 Ga0495640_0300859 3300046533 Bacteria 996
207 Ga0495667_0025765 3300046559 Bacteria 3961
208 Ga0495656_0010917 3300046615 Bacteria 3319
209 Ga0495634_0095182 3300046642 Bacteria 1929
210 Ga0495635_0059346 3300046663 Bacteria 2630
211 Ga0495599_0037662 3300046678 Bacteria 3038
212 Ga0495669_0001182 3300046684 Bacteria 10843
213 Ga0495613_0056573 3300046689 Bacteria 2880
214 Ga0495613_0078312 3300046689 Bacteria 2405
215 Ga0495624_0170232 3300046690 Bacteria 1329
216 Ga0495670_0177348 3300046691 Bacteria 1124
217 Ga0495600_0086472 3300046809 Bacteria 2045
218 Ga0495636_0054589 3300047318 Bacteria 1679
219 Ga0495674_0058927 3300047319 Bacteria 3355
220 Ga0495674_0096424 3300047319 Bacteria 2521
221 Ga0495676_0341560 3300047321 Bacteria 1002
222 Ga0495675_0035696 3300047444 Bacteria 3175
223 Ga0495677_0019065 3300047445 Bacteria 2488
224 Ga0495602_0259651 3300048088 Bacteria 1289
225 Ga0496100_0003676 3300048903 Bacteria 8027
226 Ga0496100_0298239 3300048903 Bacteria 1206
227 Ga0496101_0004889 3300048904 Bacteria 8506
228 Ga0496101_0144769 3300048904 Bacteria 1814
229 Ga0496102_0005666 3300048905 Bacteria 10602
230 Ga0496102_0337278 3300048905 Bacteria 1420
231 Ga0496103_0165062 3300048906 Bacteria 1421
232 Ga0496103_0211333 3300048906 Bacteria 1248
233 Ga0496104_0031443 3300048907 Bacteria 4936
234 Ga0496105_0083493 3300048908 Bacteria 2638
235 Ga0496106_0007337 3300048909 Bacteria 8148
236 Ga0496106_0016949 3300048909 Bacteria 5392
237 Ga0496107_0002212 3300048910 Bacteria 12503
238 Ga0496108_0014643 3300048911 Bacteria 6402
239 Ga0496109_0050644 3300048912 Bacteria 3782
240 Ga0496110_0006634 3300048913 Bacteria 9194
241 Ga0496111_0029115 3300048914 Bacteria 3920
242 Ga0496111_0035820 3300048914 Bacteria 3548
243 Ga0496111_0395230 3300048914 Bacteria 1022
244 Ga0496112_0000059 3300048915 Bacteria 74946
245 Ga0496113_0307115 3300048916 Bacteria 1270
246 Ga0496114_0031314 3300048917 Bacteria 4377
247 Ga0496114_0039586 3300048917 Bacteria 3901
248 Ga0496115_0001457 3300048918 Bacteria 16992
249 Ga0496115_0182429 3300048918 Bacteria 1735
250 Ga0496118_0005327 3300048921 Bacteria 14652
251 Ga0496121_0006831 3300048924 Bacteria 13960
252 Ga0496121_0103928 3300048924 Bacteria 2184
253 Ga0496121_0153333 3300048924 Bacteria 1693
254 Ga0496124_0001147 3300048927 Bacteria 41534
255 Ga0496126_0012042 3300048929 Bacteria 8887
256 Ga0501038_0106613 3300049574 Bacteria 2326
257 Ga0501039_0072348 3300049575 Bacteria 2679
258 Ga0501068_0208718 3300049584 Bacteria 1240
259 Ga0501075_0114108 3300049591 Bacteria 2054
260 Ga0501075_0193896 3300049591 Bacteria 1550
261 nmdc:mga0yw44_121817_c1 3300050492 Bacteria 1680
262 nmdc:mga0yw44_2753_c1 3300050492 Bacteria 7609
263 nmdc:mga0yw44_88501_c1 3300050492 Bacteria 1952
264 nmdc:mga05p37_102253_c1 3300050507 Bacteria 3529
265 nmdc:mga05p37_262216_c1 3300050507 Bacteria 2068
266 nmdc:mga09592_126379_c1 3300050508 Unclassified 2198
267 nmdc:mga06r32_117301_c1 3300050510 Bacteria 2623
268 nmdc:mga06r32_206971_c1 3300050510 Bacteria 1950
269 nmdc:mga06r32_401551_c1 3300050510 Bacteria 1353
270 nmdc:mga08y16_211004_c1 3300050511 Bacteria 2011
271 nmdc:mga08y16_622943_c1 3300050511 Bacteria 1086
272 nmdc:mga0a205_50786_c1 3300050515 Bacteria 4004
273 nmdc:mga0a205_65034_c1 3300050515 Plasmid 3523
274 Ga0495601_0081966 3300053077 Bacteria 2071
275 Ga0495601_0107490 3300053077 Bacteria 1805
276 Ga0495595_0049181 3300053084 Bacteria 1949
277 Ga0500647_0030662 3300053091 Bacteria 2555
278 Ga0500566_0000021 3300053094 Bacteria 82710
279 Ga0500640_000426 3300053095 Bacteria 10217
280 Ga0500572_000012 3300053111 Bacteria 56206
281 Ga0500614_000889 3300053123 Bacteria 7549
282 Ga0500559_0000410 3300053136 Bacteria 30821
283 Ga0500603_000044 3300053150 Bacteria 30278
284 Ga0500630_002203 3300053159 Bacteria 9422
285 Ga0500639_000004 3300053163 Bacteria 216921
286 Ga0500576_049011 3300053725 Bacteria 1878
287 Ga0500601_001203 3300053737 Bacteria 2885
288 Ga0501084_0321219 3300054114 Bacteria 1308
289 Ga0466962_0028669 3300061719 Bacteria 2666
290 2513889450 2513237141 Bacteria 8496279
291 Ga0436365_0255975
292 JGI25406J46586_10000231
293 JGI25404J52841_10010060
294 JGI25405J52794_10028103
295 Ga0065707_10138425
296 Ga0070661_100063471
297 Ga0070661_100080913
298 Ga0070661_100106637
299 Ga0070671_100043978
300 Ga0070659_100027749
301 Ga0070714_100342515
302 Ga0070713_100063505
303 Ga0070713_100078163
304 Ga0070710_10000080
305 Ga0070711_100003708
306 Ga0070663_100049809
307 Ga0070663_100056517
308 Ga0070663_100064680
309 Ga0070678_100094509
310 Ga0070678_100250271
311 Ga0070662_100074250
312 Ga0070681_10167755
313 Ga0068867_100026379
314 Ga0068867_100346289
315 Ga0070706_100131880
316 Ga0070707_100198144
317 Ga0070698_100002415
318 Ga0070699_100003900
319 Ga0070699_100092750
320 Ga0070697_100080426
321 Ga0070697_100440805
322 Ga0068853_100196747
323 Ga0070672_100063454
324 Ga0070693_100080375
325 Ga0070665_100115717
326 Ga0068855_100015909
327 Ga0070664_100016174
328 Ga0070664_100078941
329 Ga0068857_100086490
330 Ga0068854_100291067
331 Ga0068856_100286285
332 Ga0070702_100151989
333 Ga0068852_100036275
334 Ga0068864_100145795
335 Ga0068858_100185217
336 Ga0068860_100000927
337 Ga0068860_100337740
338 Ga0081455_10025913
339 Ga0081455_10031832
340 Ga0081455_10072176
341 Ga0081455_10254836
342 Ga0081540_1004295
343 Ga0081540_1012965
344 Ga0081540_1019947
345 Ga0081540_1021916
346 Ga0081540_1038286
347 Ga0081540_1060499
348 Ga0081539_10000203
349 Ga0081539_10002117
350 Ga0070717_10003662
351 Ga0070717_10027888
352 Ga0070717_10149868
353 Ga0075365_10032283
354 Ga0075365_10137149
355 Ga0075365_10177200
356 Ga0070716_100006412
357 Ga0070716_100141797
358 Ga0070712_100002912
359 Ga0070712_100286097
360 Ga0075428_100021594
361 Ga0075428_100045761
362 Ga0075431_100503249
363 Ga0075433_10045448
364 Ga0075434_100122747
365 Ga0075429_100003955
366 Ga0075429_100444934
367 Ga0099794_10005856
368 Ga0111539_10064731
369 Ga0111539_10400068
370 Ga0111539_10481267
371 Ga0105245_10022076
372 Ga0105247_10030122
373 Ga0114129_10069443
374 Ga0114129_10497976
375 Ga0114129_10584498
376 Ga0114129_10691407
377 Ga0105243_10145510
378 Ga0105243_10289735
379 Ga0105248_10028293
380 Ga0105248_10292637
381 Ga0105237_10028481
382 Ga0105237_10085799
383 Ga0105239_10039860
384 Ga0105239_10056068
385 Ga0105239_10127343
386 Ga0105246_10029013
387 Ga0157370_10045776
388 Ga0157369_10020900
389 Ga0157374_10019172
390 Ga0157378_10046571
391 Ga0157378_10206955
392 Ga0163162_10056226
393 Ga0163162_10229577
394 Ga0163162_10231596
395 Ga0157372_10030704
396 Ga0163163_10045162
397 Ga0157379_10205777
398 Ga0157376_10015621
399 Ga0157376_10028613
400 Ga0224572_1025551
401 Ga0209758_1000580
402 Ga0207692_10006827
403 Ga0207642_10039560
404 Ga0207710_10110297
405 Ga0207699_10047687
406 Ga0207645_10050574
407 Ga0207645_10289063
408 Ga0207684_10021025
409 Ga0207693_10007097
410 Ga0207693_10099178
411 Ga0207649_10069589
412 Ga0207649_10293266
413 Ga0207646_10219982
414 Ga0207681_10125956
415 Ga0207681_10164700
416 Ga0207694_10057963
417 Ga0207694_10106554
418 Ga0207659_10060973
419 Ga0207664_10044146
420 Ga0207644_10043012
421 Ga0207690_10090940
422 Ga0207706_10009342
423 Ga0207706_10038719
424 Ga0207709_10035983
425 Ga0207709_10126809
426 Ga0207704_10033045
427 Ga0207665_10038933
428 Ga0207665_10079918
429 Ga0207665_10332160
430 Ga0207691_10136253
431 Ga0207691_10355276
432 Ga0207711_10024930
433 Ga0207711_10264047
434 Ga0207661_10489237
435 Ga0207679_10148699
436 Ga0207679_10192819
437 Ga0207651_10203561
438 Ga0207712_10102383
439 Ga0207712_10395510
440 Ga0207640_10061118
441 Ga0207677_10020759
442 Ga0207703_10212476
443 Ga0207678_10017210
444 Ga0207641_10249303
445 Ga0207648_10014258
446 Ga0207676_10100811
447 Ga0207675_100070092
448 Ga0207683_10125592
449 Ga0207683_10155554
450 Ga0207698_10027733
451 Ga0268264_10000050
452 Ga0268264_10179702
453 Ga0268264_10441602
454 Ga0265332_10002332
455 Ga0265325_10032636
456 Ga0265340_10011019
457 Ga0265339_10058442
458 Ga0265331_10026926
459 Ga0307508_10220004
460 Ga0265314_10078057
461 Ga0307516_10061782
462 Ga0373936_0012035
463 Ga0373936_0081769
464 Ga0373955_0009009
465 Ga0373924_0074949
466 Ga0373931_0181771
467 Ga0373927_0005986
468 Ga0373927_0017925
469 Ga0373947_0015963
470 Ga0373947_0250691
471 Ga0373937_0130961
472 Ga0373937_0243684
473 Ga0373925_0181285
474 Ga0373925_0193537
475 Ga0395900_0013046
476 Ga0395900_0416944
477 Ga0395898_0113371
478 Ga0395901_0203570
479 Ga0436365_0068175
480 Ga0436361_1084710
481 Ga0439453_0001074
482 Ga0466968_0060282
483 Ga0466957_0033038
484 Ga0466959_0027486
485 Ga0495592_0141677
486 Ga0495603_0108842
487 Ga0495651_0025843
488 Ga0495653_0033785
489 Ga0495582_0064583
490 Ga0495662_0058915
491 Ga0495606_0000992
492 Ga0495608_0019191
493 Ga0495631_0062134
494 Ga0495632_0058079
495 Ga0495665_0020211
496 Ga0495640_0300859
497 Ga0495667_0025765
498 Ga0495656_0010917
499 Ga0495634_0095182
500 Ga0495635_0059346
501 Ga0495599_0037662
502 Ga0495669_0001182
503 Ga0495613_0056573
504 Ga0495613_0078312
505 Ga0495624_0170232
506 Ga0495670_0177348
507 Ga0495600_0086472
508 Ga0495636_0054589
509 Ga0495674_0058927
510 Ga0495674_0096424
511 Ga0495676_0341560
512 Ga0495675_0035696
513 Ga0495677_0019065
514 Ga0495602_0259651
515 Ga0496100_0003676
516 Ga0496100_0298239
517 Ga0496101_0004889
518 Ga0496101_0144769
519 Ga0496102_0005666
520 Ga0496102_0337278
521 Ga0496103_0165062
522 Ga0496103_0211333
523 Ga0496104_0031443
524 Ga0496105_0083493
525 Ga0496106_0007337
526 Ga0496106_0016949
527 Ga0496107_0002212
528 Ga0496108_0014643
529 Ga0496109_0050644
530 Ga0496110_0006634
531 Ga0496111_0029115
532 Ga0496111_0035820
533 Ga0496111_0395230
534 Ga0496112_0000059
535 Ga0496113_0307115
536 Ga0496114_0031314
537 Ga0496114_0039586
538 Ga0496115_0001457
539 Ga0496115_0182429
540 Ga0496118_0005327
541 Ga0496121_0006831
542 Ga0496121_0103928
543 Ga0496121_0153333
544 Ga0496124_0001147
545 Ga0496126_0012042
546 Ga0501038_0106613
547 Ga0501039_0072348
548 Ga0501068_0208718
549 Ga0501075_0114108
550 Ga0501075_0193896
551 nmdc:mga0yw44_121817_c1
552 nmdc:mga0yw44_2753_c1
553 nmdc:mga0yw44_88501_c1
554 nmdc:mga05p37_102253_c1
555 nmdc:mga05p37_262216_c1
556 nmdc:mga09592_126379_c1
557 nmdc:mga06r32_117301_c1
558 nmdc:mga06r32_206971_c1
559 nmdc:mga06r32_401551_c1
560 nmdc:mga08y16_211004_c1
561 nmdc:mga08y16_622943_c1
562 nmdc:mga0a205_50786_c1
563 nmdc:mga0a205_65034_c1
564 Ga0495601_0081966
565 Ga0495601_0107490
566 Ga0495595_0049181
567 Ga0500647_0030662
568 Ga0500566_0000021
569 Ga0500640_000426
570 Ga0500572_000012
571 Ga0500614_000889
572 Ga0500559_0000410
573 Ga0500603_000044
574 Ga0500630_002203
575 Ga0500639_000004
576 Ga0500576_049011
577 Ga0500601_001203
578 Ga0501084_0321219
579 Ga0466962_0028669
580 2513889450

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03401

TctC

Tripartite tricarboxylate transporter family receptor

95

367

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
5oku-assembly1.cif.gz_A r. palustris rpa4515 with adipate 0.9565 31 325
8hkb-assembly1.cif.gz_A tpa bound-form of periplasmic terephthalate binding protein (tbp) from ideonella sakaiensis mutant k184d 0.9524 36 325
2qpq-assembly3.cif.gz_C structure of bug27 from bordetella pertussis 0.9443 33 325
5oku-assembly1.cif.gz_A r. palustris rpa4515 with adipate 0.9411 31 325
2dvz-assembly1.cif.gz_A structure of a periplasmic transporter 0.9371 32 327
ID Description Score Start End Superfamily
2qpqC02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.943 130 252 3.40.190.10
2dvzA01 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Bordetella uptake gene, domain 1 0.942 32 325 3.40.190.150
4x9tA02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9419 130 245 3.40.190.10
6hkeC02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9393 130 252 3.40.190.10
2qpqC02 Alpha Beta;3-Layer(aba) Sandwich;D-Maltodextrin-Binding Protein; domain 2;Periplasmic binding protein-like II 0.9285 130 252 3.40.190.10
ID Description Score Start End GO Terms
AF-A0A1F4AHA8-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9819 57 324
AF-A0A536U479-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9798 141 227
AF-A0A7C9TMG7-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9784 53 327
AF-A0A537UVY4-F1-model_v4 Tripartite tricarboxylate transporter substrate binding protein 0.9761 135 327
AF-A0A1J5PQ67-F1-model_v4 Tripartite tricarboxylate transporter family receptor 0.9739 69 320

Map