F389846

General Info

Members Datasets Scaffolds Average Seq Length
290 212 580 259

Family's Representative Sequence

Representative Sequence 3300031901|Ga0307406_10001244|Ga0307406_100012442
Length 233
Sequence MTASEYDAAHEAATEAAPATSNISVRRGDPLVVIENVQKHYGDFQALTDIDLTVNRGEVVVVIGPSGSGKSTLCRTINRLETITSGTISVDGKELPKEGKGLAALRADVGMVFQSFNLFAHLTIPAQLSGGQQQRVAIARALAMKPKVMLFDEPTSALDPEMINEVLDVMVGLAQDGMTMIVVTHEMGFARKAADRVVFMADGRIVEEASPDEFFTNAKSDRAKDFLSKLITH

Samples

Sample ID Description Type Environment
1 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
2 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
3 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
4 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
5 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
8 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
9 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
10 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
11 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
12 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
13 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
14 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
15 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
16 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
17 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
18 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
19 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
20 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
21 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
22 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
23 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
24 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
25 3300009763 Root nodule microbial communities of legume samples collected from Mexico - Siratro Mexico nodule mix Metagenome Nodule
26 3300009765 Root nodule microbial communities of legume samples collected from Mexico - Turtle bean Mexico pink nodule Metagenome Nodule
27 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
28 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
29 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
30 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
31 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
32 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
33 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
34 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
35 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
36 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
37 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
38 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
39 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
40 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
41 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
42 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
43 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
44 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
45 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
46 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
47 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
48 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
49 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
50 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
51 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
53 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
54 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
55 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
56 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
57 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
58 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
59 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
60 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
61 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
62 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
63 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
64 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
65 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
66 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
67 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
68 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
69 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
70 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
71 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
72 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
73 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
74 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
75 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
76 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
77 3300041456 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_5 MetaG Metagenome Rhizoplane
78 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
79 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
80 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
81 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
82 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
83 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
84 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
85 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
86 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
87 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
88 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
89 3300046524 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 rhizosphere Metagenome Rhizosphere
90 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
91 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
92 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
93 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
94 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
95 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
96 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
97 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
98 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
99 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
100 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
101 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
102 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
103 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
104 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
105 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
106 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
107 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
108 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
109 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
110 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
111 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
112 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
113 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
114 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
115 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
116 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
117 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
118 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
119 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
120 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
121 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
122 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
123 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
124 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
125 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
126 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
127 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
129 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
130 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
131 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
132 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
133 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
134 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
135 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
136 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
137 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
138 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
139 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
140 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
141 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
142 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
143 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
144 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
145 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
146 3300053133 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 endosphere Metagenome Endosphere
147 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
148 3300053140 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 endosphere Metagenome Endosphere
149 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
150 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
151 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
152 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
153 2585428094 Herbiconiux sp. YR403 Isolate Rhizosphere
154 2643221566 Microbacterium sp. Root166 Isolate Unclassified
155 2643221572 Leifsonia sp. Root60 Isolate Unclassified
156 2643221575 Microbacterium sp. Root61 Isolate Unclassified
157 2643221597 Microbacterium sp. Root180 Isolate Unclassified
158 2643221619 Agromyces sp. Root81 Isolate Unclassified
159 2643221649 Leifsonia sp. Root4 Isolate Unclassified
160 2643221669 Leifsonia sp. Root1293 Isolate Unclassified
161 2643221690 Cellulomonas sp. Root485 Isolate Unclassified
162 2643221694 Cellulomonas sp. Root137 Isolate Unclassified
163 2643221711 Terrabacter sp. Root85 Isolate Unclassified
164 2643221722 Cellulomonas sp. Root930 Isolate Unclassified
165 2721755702 Agromyces sp. AR33 Isolate Rhizosphere
166 2757320536 Microbacterium sp. NFIX05 Isolate Unclassified
167 2758568621 Promicromonospora sukumoe SAI-064 Isolate Unclassified
168 2773857758 Microbacterium chocolatum 1320 Isolate Unclassified
169 2773857759 Microbacterium sp. 1294 Isolate Unclassified
170 2773857763 Microbacterium sp. SAI-030 Isolate Unclassified
171 2808606372 Agromyces sp. 23-23 Isolate Unclassified
172 2808606447 Microbacterium sp. HAR-UPW-R2A-48 Isolate Unclassified
173 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
174 2818991318 Humibacillus xanthopallidus SLBN-155 Isolate Unclassified
175 2818991458 Terrabacter sp. 3211 Isolate Rhizosphere
176 2821268502 Microbacterium sp. YT0620BN Isolate Unclassified
177 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
178 2842888712 Tsukamurella sp. R-71941 Isolate Unclassified
179 2844852863 Herbiconiux flava DSM 26474 Isolate Rhizosphere
180 2852632344 Microbacterium sp. AK009 Isolate Rhizosphere
181 2852646457 Microbacterium sp. AK031 Isolate Rhizosphere
182 2855730933 Achromobacter sp. HZ28 Isolate Nodule
183 2855767633 Achromobacter sp. HZ34 Isolate Nodule
184 2857720070 Microbacterium sp. R-72113 Isolate Unclassified
185 2870622029 Conyzicola lurida DSM 105784 Isolate Unclassified
186 2870628048 Microbacterium thalassium DSM 12511 Isolate Rhizosphere
187 2884994152 Cellulomonas sp. H30R-01 Isolate Rhizosphere
188 2895660088 Leifsonia flava SYP-B2174 Isolate Rhizosphere
189 2897561785 Pseudoclavibacter endophyticus EGI 60007 Isolate Unclassified
190 2908678064 Microbacterium sp. 1518 Isolate Rhizosphere
191 2919069694 Microbacterium sp. 1154 Isolate Unclassified
192 2919073203 Tardiphaga robiniae 1155 Isolate Unclassified
193 2919443155 Agromyces sp. 3263 Isolate Rhizosphere
194 2919446982 Phycicoccus sp. 3266 Isolate Rhizosphere
195 2928090899 Microbacterium sp. 1262 Isolate Rhizosphere
196 2935409751 Agromyces sp. PvR057 Isolate Rhizosphere
197 2945968032 Microbacterium murale W2I7 Isolate Rhizosphere
198 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
199 2966921586 Rathayibacter agropyri 617 Isolate Rhizosphere
200 2974294766 Microbacterium proteolyticum SORGH_AS 209 Isolate Unclassified
201 2974324384 Microbacterium sp. SORGH_AS 344 Isolate Unclassified
202 2977251589 Microbacterium sp. SORGH_AS 505 Isolate Unclassified
203 2977264416 Microbacterium testaceum SORGH_AS 594 Isolate Unclassified
204 2984576629 Nocardioides zeae SORGH_AS913 Isolate Aerial Root
205 2984580707 Microbacterium paludicola SORGH_AS919 Isolate Aerial Root
206 2990256926 Nocardioides zeae SORGH_AS885 Isolate Aerial Root
207 8016254467 Microbacterium sp. SLBN-111 (version 3) Isolate Rhizosphere
208 8045830549 Microbacterium yannicii DSM 23203 Isolate Unclassified
209 8046352972 Agromyces mangrovi NBRC 112812 Isolate Rhizosphere
210 8055037949 Leucobacter rhizosphaerae H25R-14 Isolate Rhizosphere
211 8056037122 Herbiconiux gentiana CPCC 205716 Isolate Rhizosphere
212 8057345674 Herbiconiux aconitum CPCC 205763 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 78.97
Metatranscriptomes 0.34
Isolates 20.69

Biome Distribution

Category Percentage (%)
Aerial Root 1.03
Bulb 0
Endosphere 11.72
Nodule 1.38
Rhizoplane 14.48
Rhizosphere 51.38
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307406_10001244 3300031901 Bacteria 14274
2 JGI24739J22299_10002405 3300001989 Bacteria 7220
3 JGI24737J22298_10001346 3300001990 Bacteria 8697
4 JGI24735J21928_10003900 3300002067 Bacteria 5047
5 JGI24735J21928_10023967 3300002067 Bacteria 1848
6 Ga0065714_10134319 3300005288 Bacteria 1221
7 Ga0070682_100012800 3300005337 Bacteria 4816
8 Ga0070682_100064391 3300005337 Bacteria 2327
9 Ga0070668_100179220 3300005347 Bacteria 1730
10 Ga0070684_100634406 3300005535 Bacteria 994
11 Ga0068853_100008430 3300005539 Bacteria 8284
12 Ga0068855_100007079 3300005563 Bacteria 13605
13 Ga0068857_100004074 3300005577 Bacteria 12307
14 Ga0068854_100008488 3300005578 Bacteria 6609
15 Ga0068856_100010496 3300005614 Bacteria 8989
16 Ga0070702_100296342 3300005615 Bacteria 1117
17 Ga0068852_100049172 3300005616 Bacteria 3606
18 Ga0068852_100191208 3300005616 Bacteria 1931
19 Ga0081455_10004894 3300005937 Bacteria 14842
20 Ga0075365_10170638 3300006038 Bacteria 1518
21 Ga0075364_10020860 3300006051 Bacteria 4124
22 Ga0075364_10034765 3300006051 Bacteria 3254
23 Ga0075367_10117092 3300006178 Bacteria 1640
24 Ga0105244_10016967 3300009036 Bacteria 4130
25 Ga0105240_10026456 3300009093 Bacteria 7612
26 Ga0105248_10468176 3300009177 Bacteria 1421
27 Ga0105248_11202794 3300009177 Bacteria 857
28 Ga0105237_10023141 3300009545 Bacteria 6370
29 Ga0105238_10031473 3300009551 Bacteria 5402
30 Ga0123340_1000192 3300009763 Bacteria 32932
31 Ga0123341_1000928 3300009765 Bacteria 20507
32 Ga0105239_10003265 3300010375 Bacteria 20007
33 Ga0105246_10117804 3300011119 Bacteria 1963
34 Ga0157371_10112805 3300013102 Bacteria 1930
35 Ga0163162_10369459 3300013306 Bacteria 1567
36 Ga0157380_10015153 3300014326 Bacteria 5659
37 Ga0157380_10435291 3300014326 Bacteria 1255
38 Ga0206353_10461494 3300020082 Bacteria 808
39 Ga0207688_10101183 3300025901 Bacteria 1664
40 Ga0207647_10000708 3300025904 Bacteria 26164
41 Ga0207695_10034787 3300025913 Bacteria 5473
42 Ga0207671_10064035 3300025914 Bacteria 2733
43 Ga0207649_10444297 3300025920 Bacteria 978
44 Ga0207694_10004926 3300025924 Bacteria 10352
45 Ga0207687_10078969 3300025927 Bacteria 2371
46 Ga0207706_10086315 3300025933 Bacteria 2758
47 Ga0207709_10140690 3300025935 Bacteria 1658
48 Ga0207691_10166812 3300025940 Bacteria 1929
49 Ga0207661_10757524 3300025944 Bacteria 894
50 Ga0207667_10039356 3300025949 Bacteria 5039
51 Ga0207668_10699530 3300025972 Bacteria 891
52 Ga0207640_10090831 3300025981 Bacteria 2114
53 Ga0207639_10007230 3300026041 Bacteria 7564
54 Ga0207678_10065644 3300026067 Bacteria 3116
55 Ga0207678_10398058 3300026067 Bacteria 1192
56 Ga0207702_10025014 3300026078 Bacteria 4952
57 Ga0207674_10010683 3300026116 Bacteria 10379
58 Ga0207683_10124948 3300026121 Bacteria 2312
59 Ga0207683_10269953 3300026121 Bacteria 1554
60 Ga0207698_10500524 3300026142 Bacteria 1182
61 Ga0307408_100012056 3300031548 Bacteria 5722
62 Ga0307405_10058981 3300031731 Bacteria 2417
63 Ga0307405_10260822 3300031731 Bacteria 1294
64 Ga0307413_10477275 3300031824 Bacteria 996
65 Ga0307410_10000057 3300031852 Bacteria 39921
66 Ga0307406_10000265 3300031901 Bacteria 31531
67 Ga0307406_10147195 3300031901 Bacteria 1675
68 Ga0307406_10279219 3300031901 Bacteria 1273
69 Ga0307406_10355928 3300031901 Bacteria 1146
70 Ga0307407_10004093 3300031903 Bacteria 6131
71 Ga0307407_10445645 3300031903 Bacteria 938
72 Ga0307412_10156127 3300031911 Bacteria 1689
73 Ga0307409_100000171 3300031995 Bacteria 25353
74 Ga0307409_100105054 3300031995 Bacteria 2354
75 Ga0307409_100186527 3300031995 Bacteria 1842
76 Ga0307409_100275580 3300031995 Bacteria 1552
77 Ga0307409_100289392 3300031995 Bacteria 1518
78 Ga0307409_100417532 3300031995 Bacteria 1286
79 Ga0307416_100000127 3300032002 Bacteria 45966
80 Ga0307416_100087699 3300032002 Bacteria 2657
81 Ga0307416_100126400 3300032002 Bacteria 2291
82 Ga0307416_100229894 3300032002 Bacteria 1787
83 Ga0307414_10170821 3300032004 Bacteria 1738
84 Ga0307411_10112020 3300032005 Bacteria 1955
85 Ga0307411_10258996 3300032005 Bacteria 1372
86 Ga0307415_100000741 3300032126 Bacteria 14697
87 Ga0307415_100099367 3300032126 Bacteria 2130
88 Ga0307415_100210881 3300032126 Bacteria 1549
89 Ga0373954_0000168 3300035118 Bacteria 23412
90 Ga0373937_0002245 3300036401 Bacteria 16124
91 Ga0395899_0004349 3300037312 Bacteria 11058
92 Ga0395898_0088141 3300037466 Bacteria 2988
93 Ga0395905_0125259 3300037471 Bacteria 2416
94 Ga0395901_0028603 3300038443 Bacteria 5732
95 Ga0395901_0028725 3300038443 Bacteria 5722
96 Ga0400484_00334 3300038725 Bacteria 9481
97 Ga0400489_74473 3300039093 Bacteria 26130
98 Ga0439465_0015221 3300041413 Bacteria 2400
99 Ga0439465_0150381 3300041413 Bacteria 831
100 Ga0451789_0466136 3300041443 Bacteria 1712
101 Ga0451791_0003239 3300041451 Bacteria 3279
102 Ga0451793_0054235 3300041452 Bacteria 1516
103 Ga0451793_0064814 3300041452 Bacteria 1865
104 Ga0451797_1362338 3300041453 Bacteria 1535
105 Ga0451795_0737924 3300041456 Bacteria 1202
106 Ga0451807_1638792 3300041486 Bacteria 2765
107 Ga0451837_1651977 3300041494 Bacteria 1322
108 Ga0439448_0015093 3300042005 Bacteria 2336
109 Ga0439464_0009964 3300042439 Bacteria 2506
110 Ga0439460_0008981 3300042461 Bacteria 2529
111 Ga0439440_0002620 3300042993 Bacteria 3410
112 Ga0466965_0238890 3300044683 Bacteria 972
113 Ga0453684_0028795 3300044712 Bacteria 7910
114 Ga0495638_0018862 3300046460 Bacteria 4573
115 Ga0495638_0113611 3300046460 Bacteria 1606
116 Ga0495638_0167863 3300046460 Bacteria 1261
117 Ga0495585_0079630 3300046492 Bacteria 1777
118 Ga0495632_0000392 3300046519 Bacteria 41102
119 Ga0495648_0217321 3300046524 Bacteria 945
120 Ga0495656_0156810 3300046615 Bacteria 1104
121 Ga0495635_0279331 3300046663 Bacteria 1122
122 Ga0495657_0226693 3300046675 Bacteria 1131
123 Ga0495671_0020125 3300046692 Bacteria 3519
124 Ga0495672_0013174 3300047320 Bacteria 5719
125 Ga0495672_0274543 3300047320 Bacteria 808
126 Ga0495683_0105353 3300047323 Bacteria 1352
127 Ga0495686_0034284 3300047472 Bacteria 3270
128 Ga0496100_0016263 3300048903 Bacteria 4364
129 Ga0496100_0352003 3300048903 Bacteria 1112
130 Ga0496101_0010470 3300048904 Bacteria 6123
131 Ga0496101_0094318 3300048904 Bacteria 2230
132 Ga0496102_0012064 3300048905 Bacteria 7467
133 Ga0496102_0116467 3300048905 Bacteria 2494
134 Ga0496102_0577125 3300048905 Bacteria 1047
135 Ga0496103_0004616 3300048906 Bacteria 8339
136 Ga0496103_0076312 3300048906 Bacteria 2103
137 Ga0496104_0062040 3300048907 Bacteria 3544
138 Ga0496104_0105681 3300048907 Bacteria 2698
139 Ga0496104_0417711 3300048907 Bacteria 1253
140 Ga0496105_0474098 3300048908 Bacteria 985
141 Ga0496106_0183773 3300048909 Bacteria 1660
142 Ga0496107_0087751 3300048910 Bacteria 2271
143 Ga0496108_0000856 3300048911 Bacteria 23751
144 Ga0496109_0239535 3300048912 Bacteria 1707
145 Ga0496110_0044609 3300048913 Bacteria 3872
146 Ga0496110_0078336 3300048913 Bacteria 2942
147 Ga0496110_0571776 3300048913 Bacteria 1026
148 Ga0496111_0037077 3300048914 Bacteria 3489
149 Ga0496111_0082891 3300048914 Bacteria 2342
150 Ga0496113_0076820 3300048916 Bacteria 2552
151 Ga0496113_0103785 3300048916 Bacteria 2205
152 Ga0496113_0162065 3300048916 Bacteria 1768
153 Ga0496114_0014311 3300048917 Bacteria 6364
154 Ga0496114_0026962 3300048917 Bacteria 4706
155 Ga0496114_0055323 3300048917 Bacteria 3309
156 Ga0496114_0168298 3300048917 Bacteria 1909
157 Ga0496114_0295292 3300048917 Bacteria 1430
158 Ga0496114_0352143 3300048917 Bacteria 1302
159 Ga0496114_0412370 3300048917 Bacteria 1196
160 Ga0496114_0473592 3300048917 Bacteria 1108
161 Ga0496115_0126219 3300048918 Bacteria 2108
162 Ga0496115_0193202 3300048918 Bacteria 1682
163 Ga0496117_0000028 3300048920 Bacteria 407392
164 Ga0496117_0002355 3300048920 Bacteria 24155
165 Ga0496117_0025035 3300048920 Bacteria 4701
166 Ga0496119_0006677 3300048922 Bacteria 10612
167 Ga0496119_0037861 3300048922 Bacteria 3126
168 Ga0496119_0039237 3300048922 Bacteria 3045
169 Ga0496120_0002156 3300048923 Bacteria 20983
170 Ga0496120_0004809 3300048923 Bacteria 11063
171 Ga0496120_0038691 3300048923 Bacteria 2820
172 Ga0496121_0160607 3300048924 Bacteria 1644
173 Ga0496122_0016488 3300048925 Bacteria 6984
174 Ga0496122_0026070 3300048925 Bacteria 5055
175 Ga0496123_0013182 3300048926 Bacteria 6968
176 Ga0496124_0010149 3300048927 Bacteria 9583
177 Ga0496124_0068780 3300048927 Bacteria 2942
178 Ga0496124_0119290 3300048927 Bacteria 2110
179 Ga0496124_0179995 3300048927 Bacteria 1628
180 Ga0496125_0001414 3300048928 Bacteria 35032
181 Ga0496125_0003322 3300048928 Bacteria 19662
182 Ga0496125_0057543 3300048928 Bacteria 3147
183 Ga0496126_0037661 3300048929 Bacteria 4510
184 Ga0496126_0172310 3300048929 Bacteria 1843
185 Ga0496126_0298014 3300048929 Bacteria 1331
186 Ga0496126_0301789 3300048929 Bacteria 1321
187 Ga0501298_022431 3300049521 Bacteria 1190
188 Ga0501033_0011207 3300049570 Bacteria 6866
189 Ga0501033_0062501 3300049570 Bacteria 2742
190 Ga0501038_0145159 3300049574 Bacteria 1938
191 Ga0501038_0315471 3300049574 Bacteria 1224
192 Ga0501039_0189773 3300049575 Bacteria 1616
193 Ga0501041_0135764 3300049577 Bacteria 1533
194 Ga0501042_0003829 3300049578 Bacteria 9514
195 Ga0501047_0010508 3300049581 Bacteria 8758
196 Ga0501073_0000024 3300049589 Bacteria 128851
197 Ga0501083_0000056 3300049744 Bacteria 82115
198 Ga0501083_0023147 3300049744 Bacteria 4310
199 Ga0501044_0025919 3300049823 Bacteria 6214
200 nmdc:mga00v17_13351_c1 3300050491 Bacteria 4558
201 nmdc:mga0yw44_109320_c1 3300050492 Bacteria 1770
202 nmdc:mga0sz30_14100_c1 3300050516 Bacteria 3140
203 Ga0500610_0088109 3300053079 Bacteria 1614
204 Ga0495595_0037020 3300053084 Bacteria 2217
205 Ga0500651_0022866 3300053093 Bacteria 3909
206 Ga0500651_0060220 3300053093 Bacteria 2373
207 Ga0500566_0000654 3300053094 Bacteria 19425
208 Ga0500650_0016676 3300053098 Bacteria 3155
209 Ga0500555_013495 3300053103 Bacteria 2357
210 Ga0500556_0001014 3300053104 Bacteria 14754
211 Ga0500593_000363 3300053117 Bacteria 18295
212 Ga0500595_000435 3300053119 Bacteria 26013
213 Ga0500618_001044 3300053125 Bacteria 13824
214 Ga0500642_0000027 3300053130 Bacteria 119688
215 Ga0500642_0009374 3300053130 Bacteria 3394
216 Ga0500652_000815 3300053131 Bacteria 10430
217 Ga0500655_008709 3300053133 Bacteria 1825
218 Ga0500559_0000817 3300053136 Bacteria 20217
219 Ga0500559_0000868 3300053136 Bacteria 19392
220 Ga0500559_0000993 3300053136 Bacteria 17684
221 Ga0500559_0123094 3300053136 Bacteria 1207
222 Ga0500573_0008741 3300053140 Bacteria 5590
223 Ga0500573_0018907 3300053140 Bacteria 3936
224 Ga0500573_0056501 3300053140 Bacteria 2253
225 Ga0500573_0056771 3300053140 Bacteria 2248
226 Ga0500573_0099714 3300053140 Bacteria 1635
227 Ga0500589_146443 3300053147 Bacteria 966
228 Ga0500616_0029333 3300053153 Bacteria 3028
229 Ga0500636_0006094 3300053177 Bacteria 6920
230 Ga0500645_009703 3300053730 Bacteria 3225
231 2587864536 2585428094 Bacteria 3604039
232 2643849591 2643221566 Bacteria 3460379
233 2643877914 2643221572 Bacteria 3614809
234 2643888740 2643221575 Bacteria 4022601
235 2643996181 2643221597 Bacteria 3347721
236 2644113921 2643221619 Bacteria 4158469
237 2644280509 2643221649 Bacteria 3867359
238 2644384969 2643221669 Bacteria 3611286
239 2644506525 2643221690 Bacteria 4654705
240 2644526557 2643221694 Bacteria 4392972
241 2644609217 2643221711 Bacteria 4865335
242 2644671223 2643221722 Bacteria 4247614
243 2723642596 2721755702 Bacteria 4373124
244 2758224211 2757320536 Bacteria 3629334
245 2760622626 2758568621 Bacteria 5967089
246 2774381513 2773857758 Bacteria 3592392
247 2774383407 2773857759 Bacteria 2963774
248 2774399968 2773857763 Bacteria 4180068
249 2808902566 2808606372 Bacteria 4649509
250 2809227040 2808606447 Bacteria 3572005
251 2816428096 2816332119 Bacteria 8120218
252 2819427077 2818991318 Bacteria 5266538
253 2819666069 2818991458 Bacteria 4794049
254 2821269584 2821268502 Bacteria 3750023
255 2833710496 2833709550 Bacteria 4008291
256 2842891412 2842888712 Bacteria 4279094
257 2844854902 2844852863 Bacteria 3849151
258 2852633574 2852632344 Bacteria 3463163
259 2852649613 2852646457 Bacteria 3408613
260 2855732668 2855730933 Bacteria 7047938
261 2855771420 2855767633 Bacteria 7049357
262 2857720441 2857720070 Bacteria 3189373
263 2870622724 2870622029 Bacteria 3643329
264 2870629925 2870628048 Bacteria 3696012
265 2884995089 2884994152 Bacteria 4492978
266 2895662785 2895660088 Bacteria 3782833
267 2897564741 2897561785 Bacteria 3256946
268 2908678983 2908678064 Bacteria 3482747
269 2919071331 2919069694 Bacteria 3622919
270 2919077627 2919073203 Bacteria 6531949
271 2919443173 2919443155 Bacteria 4072969
272 2919446995 2919446982 Bacteria 3994487
273 2928092472 2928090899 Bacteria 3158267
274 2935413241 2935409751 Bacteria 4179611
275 2945968302 2945968032 Bacteria 4111363
276 2946036992 2946033335 Bacteria 3835514
277 2966923890 2966921586 Bacteria 3092803
278 2974297825 2974294766 Bacteria 3767688
279 2974325940 2974324384 Bacteria 3750535
280 2977253596 2977251589 Bacteria 2952848
281 2977266115 2977264416 Bacteria 3750737
282 2984577437 2984576629 Bacteria 4248407
283 2984580754 2984580707 Bacteria 3351387
284 2990259597 2990256926 Bacteria 4252839
285 8016254486 8016254467 Bacteria 3797036
286 8045831253 8045830549 Bacteria 4444727
287 8046356071 8046352972 Bacteria 3613806
288 8055039276 8055037949 Bacteria 3337834
289 8056038828 8056037122 Bacteria 3854319
290 8057349535 8057345674 Bacteria 4160394
291 Ga0307406_10001244
292 JGI24739J22299_10002405
293 JGI24737J22298_10001346
294 JGI24735J21928_10003900
295 JGI24735J21928_10023967
296 Ga0065714_10134319
297 Ga0070682_100012800
298 Ga0070682_100064391
299 Ga0070668_100179220
300 Ga0070684_100634406
301 Ga0068853_100008430
302 Ga0068855_100007079
303 Ga0068857_100004074
304 Ga0068854_100008488
305 Ga0068856_100010496
306 Ga0070702_100296342
307 Ga0068852_100049172
308 Ga0068852_100191208
309 Ga0081455_10004894
310 Ga0075365_10170638
311 Ga0075364_10020860
312 Ga0075364_10034765
313 Ga0075367_10117092
314 Ga0105244_10016967
315 Ga0105240_10026456
316 Ga0105248_10468176
317 Ga0105248_11202794
318 Ga0105237_10023141
319 Ga0105238_10031473
320 Ga0123340_1000192
321 Ga0123341_1000928
322 Ga0105239_10003265
323 Ga0105246_10117804
324 Ga0157371_10112805
325 Ga0163162_10369459
326 Ga0157380_10015153
327 Ga0157380_10435291
328 Ga0206353_10461494
329 Ga0207688_10101183
330 Ga0207647_10000708
331 Ga0207695_10034787
332 Ga0207671_10064035
333 Ga0207649_10444297
334 Ga0207694_10004926
335 Ga0207687_10078969
336 Ga0207706_10086315
337 Ga0207709_10140690
338 Ga0207691_10166812
339 Ga0207661_10757524
340 Ga0207667_10039356
341 Ga0207668_10699530
342 Ga0207640_10090831
343 Ga0207639_10007230
344 Ga0207678_10065644
345 Ga0207678_10398058
346 Ga0207702_10025014
347 Ga0207674_10010683
348 Ga0207683_10124948
349 Ga0207683_10269953
350 Ga0207698_10500524
351 Ga0307408_100012056
352 Ga0307405_10058981
353 Ga0307405_10260822
354 Ga0307413_10477275
355 Ga0307410_10000057
356 Ga0307406_10000265
357 Ga0307406_10147195
358 Ga0307406_10279219
359 Ga0307406_10355928
360 Ga0307407_10004093
361 Ga0307407_10445645
362 Ga0307412_10156127
363 Ga0307409_100000171
364 Ga0307409_100105054
365 Ga0307409_100186527
366 Ga0307409_100275580
367 Ga0307409_100289392
368 Ga0307409_100417532
369 Ga0307416_100000127
370 Ga0307416_100087699
371 Ga0307416_100126400
372 Ga0307416_100229894
373 Ga0307414_10170821
374 Ga0307411_10112020
375 Ga0307411_10258996
376 Ga0307415_100000741
377 Ga0307415_100099367
378 Ga0307415_100210881
379 Ga0373954_0000168
380 Ga0373937_0002245
381 Ga0395899_0004349
382 Ga0395898_0088141
383 Ga0395905_0125259
384 Ga0395901_0028603
385 Ga0395901_0028725
386 Ga0400484_00334
387 Ga0400489_74473
388 Ga0439465_0015221
389 Ga0439465_0150381
390 Ga0451789_0466136
391 Ga0451791_0003239
392 Ga0451793_0054235
393 Ga0451793_0064814
394 Ga0451797_1362338
395 Ga0451795_0737924
396 Ga0451807_1638792
397 Ga0451837_1651977
398 Ga0439448_0015093
399 Ga0439464_0009964
400 Ga0439460_0008981
401 Ga0439440_0002620
402 Ga0466965_0238890
403 Ga0453684_0028795
404 Ga0495638_0018862
405 Ga0495638_0113611
406 Ga0495638_0167863
407 Ga0495585_0079630
408 Ga0495632_0000392
409 Ga0495648_0217321
410 Ga0495656_0156810
411 Ga0495635_0279331
412 Ga0495657_0226693
413 Ga0495671_0020125
414 Ga0495672_0013174
415 Ga0495672_0274543
416 Ga0495683_0105353
417 Ga0495686_0034284
418 Ga0496100_0016263
419 Ga0496100_0352003
420 Ga0496101_0010470
421 Ga0496101_0094318
422 Ga0496102_0012064
423 Ga0496102_0116467
424 Ga0496102_0577125
425 Ga0496103_0004616
426 Ga0496103_0076312
427 Ga0496104_0062040
428 Ga0496104_0105681
429 Ga0496104_0417711
430 Ga0496105_0474098
431 Ga0496106_0183773
432 Ga0496107_0087751
433 Ga0496108_0000856
434 Ga0496109_0239535
435 Ga0496110_0044609
436 Ga0496110_0078336
437 Ga0496110_0571776
438 Ga0496111_0037077
439 Ga0496111_0082891
440 Ga0496113_0076820
441 Ga0496113_0103785
442 Ga0496113_0162065
443 Ga0496114_0014311
444 Ga0496114_0026962
445 Ga0496114_0055323
446 Ga0496114_0168298
447 Ga0496114_0295292
448 Ga0496114_0352143
449 Ga0496114_0412370
450 Ga0496114_0473592
451 Ga0496115_0126219
452 Ga0496115_0193202
453 Ga0496117_0000028
454 Ga0496117_0002355
455 Ga0496117_0025035
456 Ga0496119_0006677
457 Ga0496119_0037861
458 Ga0496119_0039237
459 Ga0496120_0002156
460 Ga0496120_0004809
461 Ga0496120_0038691
462 Ga0496121_0160607
463 Ga0496122_0016488
464 Ga0496122_0026070
465 Ga0496123_0013182
466 Ga0496124_0010149
467 Ga0496124_0068780
468 Ga0496124_0119290
469 Ga0496124_0179995
470 Ga0496125_0001414
471 Ga0496125_0003322
472 Ga0496125_0057543
473 Ga0496126_0037661
474 Ga0496126_0172310
475 Ga0496126_0298014
476 Ga0496126_0301789
477 Ga0501298_022431
478 Ga0501033_0011207
479 Ga0501033_0062501
480 Ga0501038_0145159
481 Ga0501038_0315471
482 Ga0501039_0189773
483 Ga0501041_0135764
484 Ga0501042_0003829
485 Ga0501047_0010508
486 Ga0501073_0000024
487 Ga0501083_0000056
488 Ga0501083_0023147
489 Ga0501044_0025919
490 nmdc:mga00v17_13351_c1
491 nmdc:mga0yw44_109320_c1
492 nmdc:mga0sz30_14100_c1
493 Ga0500610_0088109
494 Ga0495595_0037020
495 Ga0500651_0022866
496 Ga0500651_0060220
497 Ga0500566_0000654
498 Ga0500650_0016676
499 Ga0500555_013495
500 Ga0500556_0001014
501 Ga0500593_000363
502 Ga0500595_000435
503 Ga0500618_001044
504 Ga0500642_0000027
505 Ga0500642_0009374
506 Ga0500652_000815
507 Ga0500655_008709
508 Ga0500559_0000817
509 Ga0500559_0000868
510 Ga0500559_0000993
511 Ga0500559_0123094
512 Ga0500573_0008741
513 Ga0500573_0018907
514 Ga0500573_0056501
515 Ga0500573_0056771
516 Ga0500573_0099714
517 Ga0500589_146443
518 Ga0500616_0029333
519 Ga0500636_0006094
520 Ga0500645_009703
521 2587864536
522 2643849591
523 2643877914
524 2643888740
525 2643996181
526 2644113921
527 2644280509
528 2644384969
529 2644506525
530 2644526557
531 2644609217
532 2644671223
533 2723642596
534 2758224211
535 2760622626
536 2774381513
537 2774383407
538 2774399968
539 2808902566
540 2809227040
541 2816428096
542 2819427077
543 2819666069
544 2821269584
545 2833710496
546 2842891412
547 2844854902
548 2852633574
549 2852649613
550 2855732668
551 2855771420
552 2857720441
553 2870622724
554 2870629925
555 2884995089
556 2895662785
557 2897564741
558 2908678983
559 2919071331
560 2919077627
561 2919443173
562 2919446995
563 2928092472
564 2935413241
565 2945968302
566 2946036992
567 2966923890
568 2974297825
569 2974325940
570 2977253596
571 2977266115
572 2984577437
573 2984580754
574 2990259597
575 8016254486
576 8045831253
577 8046356071
578 8055039276
579 8056038828
580 8057349535

MSA Aligner

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

47

127

0.97

PF00005

ABC_tran

ABC transporter

124

156

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
4u00-assembly1.cif.gz_A crystal structure of ttha1159 in complex with adp 0.9897 14 252
3c41-assembly1.cif.gz_K abc protein artp in complex with amp-pnp/mg2+ 0.9781 12 252
4u00-assembly1.cif.gz_A crystal structure of ttha1159 in complex with adp 0.9735 14 252
4yms-assembly1.cif.gz_A crystal structure of an amino acid abc transporter 0.9724 15 252
3c41-assembly1.cif.gz_K abc protein artp in complex with amp-pnp/mg2+ 0.9702 12 252
ID Description Score Start End Superfamily
4ymtJ00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9823 15 252 3.40.50.300
4ymtJ00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9703 15 252 3.40.50.300
af_P0AAF6_1_241_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9526 15 249 3.40.50.300
af_P33360_1_239_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9421 15 251 3.40.50.300
af_O05779_1_226_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9378 14 233 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A1A9R3F0-F1-model_v4 ABC transporter ATP-binding protein 0.9964 15 254 GO:0005524
GO:0005886
GO:0015424
GO:0016887
AF-A0A1A9R3F0-F1-model_v4 ABC transporter ATP-binding protein 0.9841 15 254 GO:0005524
GO:0005886
GO:0015424
GO:0016887
AF-K2J707-F1-model_v4 ABC transporter 0.9786 9 256 GO:0005524
GO:0005886
GO:0015424
GO:0016887
AF-A0A1Y6KM03-F1-model_v4 Putative ABC transporter (ATP-binding/permease protein) 0.9605 10 258 GO:0005524
GO:0006865
GO:0016887
GO:0022857
GO:0043190
AF-A0A711Z809-F1-model_v4 Arginine transport ATP-binding protein ArtP (EC 7.4.2.1) 0.9573 14 236 GO:0005524
GO:0005886
GO:0015276
GO:0016887
GO:0030288

Map