F389736

General Info

Members Datasets Scaffolds Average Seq Length
290 208 580 302

Family's Representative Sequence

Representative Sequence 3300009094|Ga0111539_10018835|Ga0111539_100188356
Length 346
Sequence MYHFAIPAPHCLASLRFLGLLHHGSLALRELYLSLTGFLGSVICFDSSFADKIRRTLLYQGRLFVFSPRESTLALCELADRLIREAFGKLSPREAQYSLPVEEYAAILADVKPKFIHHPKSKECIQAILADMTCDLDKTYFDVPRMRSSTSDNYLTTGIAYAWHPHRDTWYSAPMCQLNWWIPIYDIDADDGVAFHSQYWGKPVANDSRIYNYYEWNKTHRAAASQYVKADTRPLPRPVEPVELEPQIRPVCPAGGIILFSGAQLHSSVPNTSGKTRFSIDFRTVDLDDVKDKRGAPNIDSACTGTSLRDFLKGTDLSRIPEEVVSLYNDGTEVAGELIYRPSNTK

Samples

Sample ID Description Type Environment
1 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
2 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
3 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
4 3300004799 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
5 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
6 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
11 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
12 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
13 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
14 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
15 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
18 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
19 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
20 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
24 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
27 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
28 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
29 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
35 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
36 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
37 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
38 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
39 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
40 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
41 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
42 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
43 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
44 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
45 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
46 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
47 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
50 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
51 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
52 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
53 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
54 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
57 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
61 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
62 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
63 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
64 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
65 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
66 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
67 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
68 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
69 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
70 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
71 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
72 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
73 3300020077 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
74 3300020080 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
75 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
76 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
77 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
78 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
107 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
110 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
111 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
112 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
113 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
114 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
115 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
116 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
117 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
118 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
119 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
120 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
121 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
122 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
123 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
124 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
125 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
126 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
127 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
128 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
129 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
130 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
131 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
132 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
133 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
134 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
135 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
136 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
137 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
138 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
139 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
140 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
141 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
142 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
143 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
144 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
145 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
146 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
147 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
148 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
149 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
150 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
151 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
152 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
153 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
154 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
155 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
156 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
157 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
163 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
167 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
169 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
170 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
171 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
172 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
173 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
174 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
175 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
176 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
177 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
178 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
179 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
180 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
181 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
182 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
183 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
184 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
185 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
186 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
187 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
188 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
189 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
190 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
191 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
192 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
193 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
194 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
195 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
196 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
197 3300053124 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 endosphere Metagenome Endosphere
198 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
199 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
200 3300059647 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 43R_SW_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
201 3300059652 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 72R_SD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
202 3300060344 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 36R_AW_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
203 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
204 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
205 2517572101 Frankia sp. DC12 Isolate Nodule
206 2687453737 Frankia sp. BMG5.36 Isolate Nodule
207 2687453743 Frankia colletiae Cc1.17 Isolate Nodule
208 8002784119 Frankia sp. AgB1.9 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 94.83
Metatranscriptomes 3.79
Isolates 1.38

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.45
Nodule 1.38
Rhizoplane 3.1
Rhizosphere 85.86
Stem 0
Stem Tuber 0
Unclassified 17.24

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0111539_10018835 3300009094 Bacteria 8542
2 rootH2_10000010 3300003320 Bacteria 1820
3 rootH2_10100278 3300003320 Bacteria 1038
4 rootH1_10037143 3300003323 Bacteria 3443
5 Ga0058863_11535727 3300004799 Unclassified 2268
6 Ga0058861_11992804 3300004800 Bacteria 1800
7 Ga0065715_10018258 3300005293 Unclassified 3160
8 Ga0070658_10010293 3300005327 Bacteria 7502
9 Ga0070670_100025392 3300005331 Bacteria 5098
10 Ga0068869_100068632 3300005334 Unclassified 2619
11 Ga0070660_100218348 3300005339 Unclassified 1549
12 Ga0070668_100009327 3300005347 Bacteria 7280
13 Ga0070669_100056182 3300005353 Bacteria 2886
14 Ga0070675_100032259 3300005354 Bacteria 4238
15 Ga0070674_100232823 3300005356 Bacteria 1438
16 Ga0070688_100047204 3300005365 Bacteria 2670
17 Ga0070667_100008547 3300005367 Bacteria 8488
18 Ga0070713_100094620 3300005436 Unclassified 2576
19 Ga0070713_100465670 3300005436 Bacteria 1189
20 Ga0070710_10071279 3300005437 Bacteria 2004
21 Ga0070711_100333868 3300005439 Unclassified 1214
22 Ga0068867_100122133 3300005459 Bacteria 2015
23 Ga0070699_100023086 3300005518 Bacteria 5360
24 Ga0070679_100551204 3300005530 Unclassified 1097
25 Ga0068855_100228606 3300005563 Unclassified 2084
26 Ga0070664_100029548 3300005564 Bacteria 4570
27 Ga0068857_100026648 3300005577 Bacteria 5095
28 Ga0068856_100134552 3300005614 Bacteria 2477
29 Ga0068859_100000014 3300005617 Bacteria 280955
30 Ga0068859_100001770 3300005617 Bacteria 21973
31 Ga0068859_100037477 3300005617 Bacteria 4866
32 Ga0068864_100262509 3300005618 Bacteria 1607
33 Ga0068864_100367467 3300005618 Bacteria 1361
34 Ga0068866_10048544 3300005718 Bacteria 2147
35 Ga0068861_100005054 3300005719 Bacteria 8898
36 Ga0068861_100259449 3300005719 Bacteria 1487
37 Ga0068870_10013313 3300005840 Bacteria 3864
38 Ga0068870_10109469 3300005840 Bacteria 1575
39 Ga0068863_100001622 3300005841 Bacteria 22221
40 Ga0068858_100000073 3300005842 Bacteria 104882
41 Ga0068858_100048540 3300005842 Bacteria 3932
42 Ga0068860_100069893 3300005843 Unclassified 3338
43 Ga0068862_100000607 3300005844 Bacteria 37253
44 Ga0068862_100009909 3300005844 Bacteria 7870
45 Ga0068862_100034616 3300005844 Bacteria 4275
46 Ga0068862_100561613 3300005844 Unclassified 1091
47 Ga0081455_10022626 3300005937 Bacteria 5869
48 Ga0081455_10084105 3300005937 Bacteria 2598
49 Ga0081538_10001101 3300005981 Bacteria 28619
50 Ga0081539_10001345 3300005985 Bacteria 42808
51 Ga0081539_10050202 3300005985 Bacteria 2362
52 Ga0075365_10178315 3300006038 Bacteria 1485
53 Ga0075364_10013166 3300006051 Bacteria 5076
54 Ga0075432_10095052 3300006058 Unclassified 1095
55 Ga0070716_100284013 3300006173 Unclassified 1143
56 Ga0070712_100085800 3300006175 Bacteria 2293
57 Ga0068871_100044613 3300006358 Bacteria 3567
58 Ga0075428_100009483 3300006844 Bacteria 10805
59 Ga0075428_100016523 3300006844 Bacteria 8149
60 Ga0075428_100061416 3300006844 Bacteria 4115
61 Ga0075428_100268685 3300006844 Bacteria 1835
62 Ga0075431_100083918 3300006847 Bacteria 3289
63 Ga0075433_10076492 3300006852 Unclassified 2948
64 Ga0075433_10183995 3300006852 Bacteria 1859
65 Ga0075434_100001910 3300006871 Bacteria 18049
66 Ga0075434_100205056 3300006871 Unclassified 1992
67 Ga0075429_100048565 3300006880 Unclassified 3691
68 Ga0075429_100120431 3300006880 Bacteria 2294
69 Ga0075429_100276876 3300006880 Bacteria 1469
70 Ga0068865_100259967 3300006881 Bacteria 1374
71 Ga0075436_100107321 3300006914 Bacteria 1947
72 Ga0097620_100000014 3300006931 Bacteria 280955
73 Ga0097620_100001770 3300006931 Bacteria 21973
74 Ga0097620_100037477 3300006931 Bacteria 4866
75 Ga0075435_100001888 3300007076 Bacteria 13631
76 Ga0111539_10021258 3300009094 Bacteria 7989
77 Ga0111539_10520047 3300009094 Bacteria 1386
78 Ga0105247_10001064 3300009101 Bacteria 20528
79 Ga0114129_10015667 3300009147 Bacteria 10780
80 Ga0114129_10145327 3300009147 Unclassified 3249
81 Ga0105241_10000826 3300009174 Bacteria 23491
82 Ga0105237_10012454 3300009545 Bacteria 8965
83 Ga0105237_10033915 3300009545 Bacteria 5171
84 Ga0105238_10003664 3300009551 Bacteria 15310
85 Ga0105238_10197041 3300009551 Unclassified 1990
86 Ga0105249_10002930 3300009553 Bacteria 14719
87 Ga0105249_10002989 3300009553 Bacteria 14586
88 Ga0105249_10050672 3300009553 Bacteria 3785
89 Ga0105239_10010253 3300010375 Bacteria 10493
90 Ga0105246_10019807 3300011119 Unclassified 4309
91 Ga0157370_10049774 3300013104 Bacteria 4009
92 Ga0157369_10007774 3300013105 Bacteria 12337
93 Ga0157374_10001080 3300013296 Bacteria 23602
94 Ga0157374_10030285 3300013296 Bacteria 4911
95 Ga0163162_10063828 3300013306 Unclassified 3727
96 Ga0157372_10167140 3300013307 Bacteria 2544
97 Ga0157375_10281158 3300013308 Bacteria 1827
98 Ga0163163_10018394 3300014325 Bacteria 6540
99 Ga0163163_10320638 3300014325 Bacteria 1603
100 Ga0163163_10528403 3300014325 Bacteria 1242
101 Ga0157377_10174488 3300014745 Bacteria 1347
102 Ga0157379_10000649 3300014968 Bacteria 28114
103 Ga0163161_10003542 3300017792 Bacteria 10925
104 Ga0206349_1404902 3300020075 Bacteria 2323
105 Ga0206351_10640880 3300020077 Bacteria 1267
106 Ga0206350_10119223 3300020080 Unclassified 2497
107 Ga0206350_11444705 3300020080 Bacteria 3251
108 Ga0154015_1107583 3300020610 Bacteria 1457
109 Ga0213875_10047753 3300021388 Unclassified 2008
110 Ga0224712_10060823 3300022467 Unclassified 1504
111 Ga0207692_10059817 3300025898 Bacteria 1969
112 Ga0207710_10000128 3300025900 Bacteria 91818
113 Ga0207643_10019779 3300025908 Bacteria 3690
114 Ga0207643_10025805 3300025908 Bacteria 3251
115 Ga0207705_10132935 3300025909 Bacteria 1853
116 Ga0207693_10024262 3300025915 Bacteria 4814
117 Ga0207663_10258114 3300025916 Unclassified 1286
118 Ga0207694_10108324 3300025924 Unclassified 2208
119 Ga0207650_10026925 3300025925 Bacteria 4108
120 Ga0207659_10025710 3300025926 Bacteria 3961
121 Ga0207687_10476524 3300025927 Bacteria 1039
122 Ga0207709_10005931 3300025935 Bacteria 6892
123 Ga0207665_10027166 3300025939 Bacteria 3781
124 Ga0207691_10016562 3300025940 Bacteria 6997
125 Ga0207689_10324634 3300025942 Bacteria 1278
126 Ga0207661_10090066 3300025944 Bacteria 2554
127 Ga0207667_10164921 3300025949 Unclassified 2278
128 Ga0207651_10147808 3300025960 Bacteria 1825
129 Ga0207712_10001452 3300025961 Bacteria 16154
130 Ga0207712_10013963 3300025961 Bacteria 5153
131 Ga0207668_10008342 3300025972 Bacteria 6169
132 Ga0207668_10133692 3300025972 Unclassified 1898
133 Ga0207668_10185286 3300025972 Bacteria 1645
134 Ga0207658_10018596 3300025986 Bacteria 4802
135 Ga0207677_10179281 3300026023 Bacteria 1665
136 Ga0207703_10000025 3300026035 Bacteria 214692
137 Ga0207703_10027613 3300026035 Bacteria 4469
138 Ga0207703_10212803 3300026035 Bacteria 1724
139 Ga0207639_10118849 3300026041 Unclassified 2168
140 Ga0207639_10243350 3300026041 Unclassified 1565
141 Ga0207702_10015569 3300026078 Bacteria 6294
142 Ga0207641_10008837 3300026088 Bacteria 8319
143 Ga0207674_10085454 3300026116 Bacteria 3150
144 Ga0207674_10665405 3300026116 Unclassified 1006
145 Ga0207675_100002202 3300026118 Bacteria 19367
146 Ga0207683_10007848 3300026121 Bacteria 9133
147 Ga0207683_10379839 3300026121 Bacteria 1299
148 Ga0207428_10028023 3300027907 Bacteria 4682
149 Ga0268265_10000015 3300028380 Bacteria 322854
150 Ga0268265_10010420 3300028380 Bacteria 6276
151 Ga0268264_10015159 3300028381 Bacteria 6323
152 Ga0307515_10103951 3300028794 Bacteria 3399
153 Ga0307507_10098461 3300033179 Bacteria 2462
154 Ga0307510_10177198 3300033180 Bacteria 1701
155 Ga0373954_0020295 3300035118 Bacteria 3004
156 Ga0373956_0003028 3300035119 Bacteria 6805
157 Ga0373956_0020367 3300035119 Unclassified 2821
158 Ga0373955_0002612 3300035172 Bacteria 7881
159 Ga0373942_0060341 3300035207 Unclassified 1086
160 Ga0373933_0000500 3300035724 Bacteria 24431
161 Ga0373933_0002099 3300035724 Bacteria 11439
162 Ga0373937_0000122 3300036401 Bacteria 74328
163 Ga0373937_0001049 3300036401 Bacteria 23345
164 Ga0395898_0358629 3300037466 Unclassified 1390
165 Ga0436364_0070515 3300037853 Bacteria 18560
166 Ga0395901_0695443 3300038443 Unclassified 1015
167 Ga0436365_1651549 3300039437 Bacteria 2399
168 Ga0436360_0982567 3300039438 Unclassified 1760
169 Ga0451577_0058509 3300042876 Bacteria 3436
170 Ga0466957_0271824 3300044842 Bacteria 1132
171 Ga0466960_0066361 3300044901 Unclassified 1784
172 Ga0451576_0022549 3300045051 Bacteria 6826
173 Ga0466958_0079377 3300045836 Bacteria 2018
174 Ga0466958_0202756 3300045836 Bacteria 1263
175 Ga0466967_0065511 3300045976 Bacteria 3234
176 Ga0466967_0093161 3300045976 Bacteria 2741
177 Ga0466967_0286737 3300045976 Bacteria 1581
178 Ga0495592_0142326 3300046454 Bacteria 1667
179 Ga0495592_0293619 3300046454 Bacteria 1059
180 Ga0495638_0006826 3300046460 Bacteria 8243
181 Ga0495638_0028931 3300046460 Bacteria 3574
182 Ga0495651_0017413 3300046462 Bacteria 5564
183 Ga0495651_0065318 3300046462 Bacteria 2779
184 Ga0495596_0028850 3300046500 Bacteria 2226
185 Ga0495632_0036320 3300046519 Bacteria 2507
186 Ga0495652_0223021 3300046529 Bacteria 1415
187 Ga0495587_0000826 3300046536 Bacteria 20534
188 Ga0495587_0002005 3300046536 Bacteria 13582
189 Ga0495645_0146108 3300046543 Bacteria 1647
190 Ga0495667_0139708 3300046559 Bacteria 1561
191 Ga0495668_0006510 3300046616 Bacteria 7642
192 Ga0495611_0037399 3300046648 Bacteria 2157
193 Ga0495625_0039737 3300046660 Bacteria 3434
194 Ga0495623_0051817 3300046679 Bacteria 2595
195 Ga0495671_0108331 3300046692 Bacteria 1357
196 Ga0495604_0023705 3300047317 Unclassified 4898
197 Ga0495604_0027340 3300047317 Unclassified 4538
198 Ga0495684_0027018 3300047471 Bacteria 4409
199 Ga0495602_0000218 3300048088 Bacteria 53233
200 Ga0495602_0001143 3300048088 Bacteria 25941
201 Ga0496102_0036383 3300048905 Bacteria 4435
202 Ga0496102_0048628 3300048905 Bacteria 3856
203 Ga0496102_0380750 3300048905 Bacteria 1328
204 Ga0496106_0044444 3300048909 Bacteria 3334
205 Ga0496109_0142197 3300048912 Bacteria 2244
206 Ga0496110_0116919 3300048913 Bacteria 2401
207 Ga0496112_0112646 3300048915 Bacteria 2691
208 Ga0496112_0272833 3300048915 Bacteria 1639
209 Ga0496112_0633393 3300048915 Bacteria 1000
210 Ga0496116_0000109 3300048919 Bacteria 185809
211 Ga0496117_0011671 3300048920 Bacteria 7845
212 Ga0496118_0001403 3300048921 Bacteria 36289
213 Ga0496119_0002066 3300048922 Bacteria 22717
214 Ga0496119_0106351 3300048922 Bacteria 1566
215 Ga0496121_0005195 3300048924 Bacteria 16873
216 Ga0496121_0008647 3300048924 Bacteria 11907
217 Ga0496126_0096243 3300048929 Bacteria 2596
218 Ga0496126_0328836 3300048929 Bacteria 1255
219 Ga0501032_0022287 3300049569 Bacteria 4392
220 Ga0501034_0053646 3300049571 Bacteria 4059
221 Ga0501034_0057972 3300049571 Unclassified 3893
222 Ga0501034_0403833 3300049571 Unclassified 1289
223 Ga0501036_0704252 3300049572 Bacteria 834
224 Ga0501037_0045317 3300049573 Unclassified 3229
225 Ga0501037_0183868 3300049573 Bacteria 1482
226 Ga0501038_0154323 3300049574 Bacteria 1870
227 Ga0501039_0018670 3300049575 Bacteria 5324
228 Ga0501040_0023058 3300049576 Bacteria 4171
229 Ga0501041_0006177 3300049577 Bacteria 7001
230 Ga0501043_0040766 3300049579 Unclassified 3649
231 Ga0501046_0026015 3300049580 Bacteria 4782
232 Ga0501047_0017647 3300049581 Bacteria 6838
233 Ga0501047_0046815 3300049581 Bacteria 4179
234 Ga0501048_0014414 3300049582 Bacteria 5851
235 Ga0501069_0009929 3300049585 Bacteria 5035
236 Ga0501070_0028808 3300049586 Unclassified 4656
237 Ga0501070_0029688 3300049586 Unclassified 4582
238 Ga0501071_0002978 3300049587 Bacteria 10470
239 Ga0501072_0016755 3300049588 Bacteria 5629
240 Ga0501073_0036241 3300049589 Unclassified 3505
241 Ga0501073_0038117 3300049589 Bacteria 3411
242 Ga0501074_0010672 3300049590 Bacteria 6670
243 Ga0501075_0052879 3300049591 Bacteria 3054
244 Ga0501077_0003256 3300049593 Bacteria 9783
245 Ga0501079_0006898 3300049741 Bacteria 8557
246 Ga0501080_0010810 3300049742 Bacteria 8352
247 Ga0501080_0013682 3300049742 Bacteria 7472
248 Ga0501080_0181231 3300049742 Bacteria 1938
249 Ga0501081_0004590 3300049743 Bacteria 8870
250 Ga0501083_0012199 3300049744 Bacteria 6013
251 Ga0501083_0159282 3300049744 Bacteria 1477
252 Ga0501035_0006445 3300049822 Bacteria 11020
253 Ga0501035_0026170 3300049822 Bacteria 5340
254 Ga0501044_0000348 3300049823 Bacteria 58122
255 Ga0501044_0002083 3300049823 Bacteria 23038
256 Ga0501044_0080833 3300049823 Unclassified 3291
257 Ga0501044_0279609 3300049823 Unclassified 1603
258 Ga0501045_0009302 3300049824 Bacteria 6874
259 nmdc:mga00v17_246722_c1 3300050491 Bacteria 1158
260 nmdc:mga05p37_173741_c1 3300050507 Bacteria 2626
261 nmdc:mga05p37_182971_c1 3300050507 Bacteria 2549
262 nmdc:mga05p37_476268_c1 3300050507 Bacteria 1439
263 nmdc:mga09592_88607_c1 3300050508 Bacteria 2643
264 nmdc:mga06r32_108266_c1 3300050510 Bacteria 2732
265 nmdc:mga06r32_138378_c1 3300050510 Bacteria 2409
266 nmdc:mga08y16_194065_c1 3300050511 Bacteria 2105
267 nmdc:mga08y16_32452_c1 3300050511 Bacteria 5489
268 nmdc:mga08y16_44947_c1 3300050511 Bacteria 4628
269 nmdc:mga0n895_1090_c1 3300050512 Bacteria 19871
270 nmdc:mga0n895_242796_c1 3300050512 Bacteria 1828
271 nmdc:mga0rr50_9466_c1 3300050513 Bacteria 6126
272 nmdc:mga08x19_147818_c1 3300050514 Unclassified 1590
273 nmdc:mga0a205_50939_c1 3300050515 Bacteria 3997
274 Ga0500610_0013567 3300053079 Unclassified 3797
275 Ga0500643_001595 3300053087 Bacteria 12818
276 Ga0500646_0001272 3300053090 Bacteria 6748
277 Ga0500646_0013889 3300053090 Bacteria 2088
278 Ga0500556_0003607 3300053104 Bacteria 4517
279 Ga0500617_010669 3300053124 Unclassified 3809
280 Ga0500588_0002319 3300053146 Bacteria 3845
281 Ga0501084_0077461 3300054114 Bacteria 2787
282 Ga0587079_010917 3300059647 Bacteria 1451
283 Ga0587107_008817 3300059652 Bacteria 1174
284 Ga0587071_013261 3300060344 Unclassified 1417
285 Ga0501082_0009640 3300060353 Bacteria 8311
286 Ga0530510_0001745 3300061734 Bacteria 14819
287 2517761421 2517572101 Bacteria 6884336
288 2689964266 2687453737 Bacteria 11203906
289 2689995273 2687453743 Bacteria 8361025
290 8002791121 8002784119 Bacteria 9788632
291 Ga0111539_10018835
292 rootH2_10000010
293 rootH2_10100278
294 rootH1_10037143
295 Ga0058863_11535727
296 Ga0058861_11992804
297 Ga0065715_10018258
298 Ga0070658_10010293
299 Ga0070670_100025392
300 Ga0068869_100068632
301 Ga0070660_100218348
302 Ga0070668_100009327
303 Ga0070669_100056182
304 Ga0070675_100032259
305 Ga0070674_100232823
306 Ga0070688_100047204
307 Ga0070667_100008547
308 Ga0070713_100094620
309 Ga0070713_100465670
310 Ga0070710_10071279
311 Ga0070711_100333868
312 Ga0068867_100122133
313 Ga0070699_100023086
314 Ga0070679_100551204
315 Ga0068855_100228606
316 Ga0070664_100029548
317 Ga0068857_100026648
318 Ga0068856_100134552
319 Ga0068859_100000014
320 Ga0068859_100001770
321 Ga0068859_100037477
322 Ga0068864_100262509
323 Ga0068864_100367467
324 Ga0068866_10048544
325 Ga0068861_100005054
326 Ga0068861_100259449
327 Ga0068870_10013313
328 Ga0068870_10109469
329 Ga0068863_100001622
330 Ga0068858_100000073
331 Ga0068858_100048540
332 Ga0068860_100069893
333 Ga0068862_100000607
334 Ga0068862_100009909
335 Ga0068862_100034616
336 Ga0068862_100561613
337 Ga0081455_10022626
338 Ga0081455_10084105
339 Ga0081538_10001101
340 Ga0081539_10001345
341 Ga0081539_10050202
342 Ga0075365_10178315
343 Ga0075364_10013166
344 Ga0075432_10095052
345 Ga0070716_100284013
346 Ga0070712_100085800
347 Ga0068871_100044613
348 Ga0075428_100009483
349 Ga0075428_100016523
350 Ga0075428_100061416
351 Ga0075428_100268685
352 Ga0075431_100083918
353 Ga0075433_10076492
354 Ga0075433_10183995
355 Ga0075434_100001910
356 Ga0075434_100205056
357 Ga0075429_100048565
358 Ga0075429_100120431
359 Ga0075429_100276876
360 Ga0068865_100259967
361 Ga0075436_100107321
362 Ga0097620_100000014
363 Ga0097620_100001770
364 Ga0097620_100037477
365 Ga0075435_100001888
366 Ga0111539_10021258
367 Ga0111539_10520047
368 Ga0105247_10001064
369 Ga0114129_10015667
370 Ga0114129_10145327
371 Ga0105241_10000826
372 Ga0105237_10012454
373 Ga0105237_10033915
374 Ga0105238_10003664
375 Ga0105238_10197041
376 Ga0105249_10002930
377 Ga0105249_10002989
378 Ga0105249_10050672
379 Ga0105239_10010253
380 Ga0105246_10019807
381 Ga0157370_10049774
382 Ga0157369_10007774
383 Ga0157374_10001080
384 Ga0157374_10030285
385 Ga0163162_10063828
386 Ga0157372_10167140
387 Ga0157375_10281158
388 Ga0163163_10018394
389 Ga0163163_10320638
390 Ga0163163_10528403
391 Ga0157377_10174488
392 Ga0157379_10000649
393 Ga0163161_10003542
394 Ga0206349_1404902
395 Ga0206351_10640880
396 Ga0206350_10119223
397 Ga0206350_11444705
398 Ga0154015_1107583
399 Ga0213875_10047753
400 Ga0224712_10060823
401 Ga0207692_10059817
402 Ga0207710_10000128
403 Ga0207643_10019779
404 Ga0207643_10025805
405 Ga0207705_10132935
406 Ga0207693_10024262
407 Ga0207663_10258114
408 Ga0207694_10108324
409 Ga0207650_10026925
410 Ga0207659_10025710
411 Ga0207687_10476524
412 Ga0207709_10005931
413 Ga0207665_10027166
414 Ga0207691_10016562
415 Ga0207689_10324634
416 Ga0207661_10090066
417 Ga0207667_10164921
418 Ga0207651_10147808
419 Ga0207712_10001452
420 Ga0207712_10013963
421 Ga0207668_10008342
422 Ga0207668_10133692
423 Ga0207668_10185286
424 Ga0207658_10018596
425 Ga0207677_10179281
426 Ga0207703_10000025
427 Ga0207703_10027613
428 Ga0207703_10212803
429 Ga0207639_10118849
430 Ga0207639_10243350
431 Ga0207702_10015569
432 Ga0207641_10008837
433 Ga0207674_10085454
434 Ga0207674_10665405
435 Ga0207675_100002202
436 Ga0207683_10007848
437 Ga0207683_10379839
438 Ga0207428_10028023
439 Ga0268265_10000015
440 Ga0268265_10010420
441 Ga0268264_10015159
442 Ga0307515_10103951
443 Ga0307507_10098461
444 Ga0307510_10177198
445 Ga0373954_0020295
446 Ga0373956_0003028
447 Ga0373956_0020367
448 Ga0373955_0002612
449 Ga0373942_0060341
450 Ga0373933_0000500
451 Ga0373933_0002099
452 Ga0373937_0000122
453 Ga0373937_0001049
454 Ga0395898_0358629
455 Ga0436364_0070515
456 Ga0395901_0695443
457 Ga0436365_1651549
458 Ga0436360_0982567
459 Ga0451577_0058509
460 Ga0466957_0271824
461 Ga0466960_0066361
462 Ga0451576_0022549
463 Ga0466958_0079377
464 Ga0466958_0202756
465 Ga0466967_0065511
466 Ga0466967_0093161
467 Ga0466967_0286737
468 Ga0495592_0142326
469 Ga0495592_0293619
470 Ga0495638_0006826
471 Ga0495638_0028931
472 Ga0495651_0017413
473 Ga0495651_0065318
474 Ga0495596_0028850
475 Ga0495632_0036320
476 Ga0495652_0223021
477 Ga0495587_0000826
478 Ga0495587_0002005
479 Ga0495645_0146108
480 Ga0495667_0139708
481 Ga0495668_0006510
482 Ga0495611_0037399
483 Ga0495625_0039737
484 Ga0495623_0051817
485 Ga0495671_0108331
486 Ga0495604_0023705
487 Ga0495604_0027340
488 Ga0495684_0027018
489 Ga0495602_0000218
490 Ga0495602_0001143
491 Ga0496102_0036383
492 Ga0496102_0048628
493 Ga0496102_0380750
494 Ga0496106_0044444
495 Ga0496109_0142197
496 Ga0496110_0116919
497 Ga0496112_0112646
498 Ga0496112_0272833
499 Ga0496112_0633393
500 Ga0496116_0000109
501 Ga0496117_0011671
502 Ga0496118_0001403
503 Ga0496119_0002066
504 Ga0496119_0106351
505 Ga0496121_0005195
506 Ga0496121_0008647
507 Ga0496126_0096243
508 Ga0496126_0328836
509 Ga0501032_0022287
510 Ga0501034_0053646
511 Ga0501034_0057972
512 Ga0501034_0403833
513 Ga0501036_0704252
514 Ga0501037_0045317
515 Ga0501037_0183868
516 Ga0501038_0154323
517 Ga0501039_0018670
518 Ga0501040_0023058
519 Ga0501041_0006177
520 Ga0501043_0040766
521 Ga0501046_0026015
522 Ga0501047_0017647
523 Ga0501047_0046815
524 Ga0501048_0014414
525 Ga0501069_0009929
526 Ga0501070_0028808
527 Ga0501070_0029688
528 Ga0501071_0002978
529 Ga0501072_0016755
530 Ga0501073_0036241
531 Ga0501073_0038117
532 Ga0501074_0010672
533 Ga0501075_0052879
534 Ga0501077_0003256
535 Ga0501079_0006898
536 Ga0501080_0010810
537 Ga0501080_0013682
538 Ga0501080_0181231
539 Ga0501081_0004590
540 Ga0501083_0012199
541 Ga0501083_0159282
542 Ga0501035_0006445
543 Ga0501035_0026170
544 Ga0501044_0000348
545 Ga0501044_0002083
546 Ga0501044_0080833
547 Ga0501044_0279609
548 Ga0501045_0009302
549 nmdc:mga00v17_246722_c1
550 nmdc:mga05p37_173741_c1
551 nmdc:mga05p37_182971_c1
552 nmdc:mga05p37_476268_c1
553 nmdc:mga09592_88607_c1
554 nmdc:mga06r32_108266_c1
555 nmdc:mga06r32_138378_c1
556 nmdc:mga08y16_194065_c1
557 nmdc:mga08y16_32452_c1
558 nmdc:mga08y16_44947_c1
559 nmdc:mga0n895_1090_c1
560 nmdc:mga0n895_242796_c1
561 nmdc:mga0rr50_9466_c1
562 nmdc:mga08x19_147818_c1
563 nmdc:mga0a205_50939_c1
564 Ga0500610_0013567
565 Ga0500643_001595
566 Ga0500646_0001272
567 Ga0500646_0013889
568 Ga0500556_0003607
569 Ga0500617_010669
570 Ga0500588_0002319
571 Ga0501084_0077461
572 Ga0587079_010917
573 Ga0587107_008817
574 Ga0587071_013261
575 Ga0501082_0009640
576 Ga0530510_0001745
577 2517761421
578 2689964266
579 2689995273
580 8002791121

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05721

PhyH

Phytanoyl-CoA dioxygenase (PhyH)

82

279

0.77

Structural Annotation

Top 5 Hits

ID Description Score Start End
4q29-assembly1.cif.gz_B ensemble refinement of plu4264 protein from photorhabdus luminescens 0.7274 101 243
6n1f-assembly6.cif.gz_D-2 crystal structure of oxidoreductase, 2og-fe(ii) oxygenase family, from burkholderia pseudomallei 0.7037 73 245
5zbe-assembly1.cif.gz_A crystal structure of aere from microcystis aeruginosa 0.6967 100 246
8qfq-assembly1.cif.gz_B ergothioneine dioxygenase, variant h147a, from thermocatellispora tengchongensis in complex with manganese 0.6695 100 246
6n1f-assembly5.cif.gz_B crystal structure of oxidoreductase, 2og-fe(ii) oxygenase family, from burkholderia pseudomallei 0.6685 67 245
ID Description Score Start End Superfamily
af_Q54PP0_7_193_2.60.120.620 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.743 103 241 2.60.120.620
af_A0A1D6Q4J3_1_128_2.60.120.620 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.7248 106 245 2.60.120.620
2oziB00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.6855 95 245 2.60.120.10
4e2qH00 Mainly Beta;Sandwich;Jelly Rolls;Jelly Rolls 0.682 100 245 2.60.120.10
3dkqC01 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.6758 102 243 2.60.120.620
ID Description Score Start End GO Terms
AF-A0A7W9LAD2-F1-model_v4 Phytanoyl-CoA dioxygenase (PhyH) 0.9921 18 288
AF-A0A351FTF9-F1-model_v4 Phytanoyl-CoA dioxygenase family protein 0.9909 2 240
AF-A0A3S0I965-F1-model_v4 Phytanoyl-CoA dioxygenase 0.9891 1 288
AF-A0A2P7APB1-F1-model_v4 Phytanoyl-CoA dioxygenase 0.989 2 294
AF-A0A2V9MYJ7-F1-model_v4 Phytanoyl-CoA dioxygenase 0.9867 2 288

Map