F389508

General Info

Members Datasets Scaffolds Average Seq Length
289 231 578 432

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2995463766|2995464637
Length 515
Sequence GSRAPRGPRSPGEPQNSDPQQGGTVRQALSGLTTRGRSFLAAGLTAIVCAYLLGEFALMRVGVLLAVLPLVSVGALVRTRYRVASGRRLTPARIPAGQEARVHLRVDNISRVPTGLLLLEDRVPYVLGPRPRFALDRVEPRGFREVSYRVRSDLRGRYPLGPLQLRLADPFGLCELTRSFTSHDLLTVVPQVQALTPVKLTGEWSGFGDSQARAVALAGEDDVVPREYRQGDDLRRVHWRSTAKYGELMVRREEQPLRHHATVLLDTRRSGHRGSGPASSFEWAVSAAASIALHLLERGYEVRLLTDTGEAVTAVGALTAGGSAAEAAGLMLDQLAMVELSDSDDLTSAEEVLRVGGEGLLVAVLGGMDDEQLAELSRLRRRAGSAIALLLDPDSWSLLRGLGNGSGNGTGNGTGRNGTSSNGGSANGGHNGAHNGGAHRPGGAPRDSAERRQRLMGDAGWRVLPARSGDTLPELWQLLGRPGTGFGGRGTTAVTAKSAAGIVQGEPTRRTDGGA

Samples

Sample ID Description Type Environment
1 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
5 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
6 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
9 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
10 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
16 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
17 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
23 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
24 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
25 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
26 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
27 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
30 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
31 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
32 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
33 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
34 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
35 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
36 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
37 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
38 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
39 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
40 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
41 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
42 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
43 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
44 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
45 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
47 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
48 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
50 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
51 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
79 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
80 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
81 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
82 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
83 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
84 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
85 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
86 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
87 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
88 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
89 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
90 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
91 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
92 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
93 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
94 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
95 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
96 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
97 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
98 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
99 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
100 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
101 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
102 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
103 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
104 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
105 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
106 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
107 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
108 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
109 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
110 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
111 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
112 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
113 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
114 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
115 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
116 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
117 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
118 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
119 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
120 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
121 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
122 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
123 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
124 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
125 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
126 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
127 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
128 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
129 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
130 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
131 3300046679 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 rhizosphere Metagenome Rhizosphere
132 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
133 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
134 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
135 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
136 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
137 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
138 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
139 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
140 3300048091 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co2_54_7 rhizosphere Metagenome Rhizosphere
141 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
142 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
143 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
144 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
147 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
149 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
151 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
152 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
153 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
155 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
156 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
157 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
158 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
159 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
160 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
161 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
162 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
163 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
164 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
165 2995463766 Streptacidiphilus fuscans NEAU-YB345 Isolate Unclassified
166 2501939600 Micromonospora sp. L5 Isolate Unclassified
167 2515154088 Salinispora arenicola CNT800 Isolate Rhizosphere
168 2515154129 Salinispora pacifica CNS103 Isolate Rhizosphere
169 2515154137 Salinispora arenicola CNX482 Isolate Rhizosphere
170 2515154202 Salinispora pacifica CNT084 Isolate Rhizosphere
171 2515154203 Salinispora arenicola CNR921 Isolate Rhizosphere
172 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
173 2643221601 Kitasatospora sp. Root187 Isolate Unclassified
174 2643221631 Kitasatospora sp. Root107 Isolate Unclassified
175 2643221678 Streptomyces sp. Root1310 Isolate Unclassified
176 2675903059 Asanoa hainanensis CGMCC 4.5593 Isolate Rhizosphere
177 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
178 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
179 2772190715 Micromonospora chokoriensis NRRL B-24750 Isolate Unclassified
180 2818991472 Kitasatospora viridis DSM 44826 Isolate Rhizosphere
181 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
182 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
183 2855670206 Micromonospora noduli Lupac 07 Isolate Nodule
184 2855676851 Micromonospora saelicesensis GAR05 Isolate Unclassified
185 2855683550 Micromonospora sp. RP3T Isolate Unclassified
186 2856741275 Microbispora triticiradicis NEAU-HRDPA2-9 Isolate Unclassified
187 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
188 2857288857 Micromonospora noduli ONO23 Isolate Unclassified
189 2858848962 Micromonospora saelicesensis GAR06 Isolate Unclassified
190 2858868258 Micromonospora sp. MH33 Isolate Unclassified
191 2858882152 Micromonospora noduli MED15 Isolate Nodule
192 2858888857 Micromonospora saelicesensis Lupac 06 Isolate Unclassified
193 2858895516 Micromonospora saelicesensis PSN13 Isolate Unclassified
194 2858902515 Micromonospora sp. MW-13 Isolate Rhizosphere
195 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
196 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
197 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
198 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
199 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
200 2869048445 Micromonospora saelicesensis PSN01 Isolate Unclassified
201 2869061728 Micromonospora noduli ONO86 Isolate Unclassified
202 2869068681 Micromonospora noduli GUI43 Isolate Unclassified
203 2873314349 Sphaerisporangium siamense DSM 45784 Isolate Rhizosphere
204 2880489317 Micromonospora ureilytica DSM 101692 Isolate Unclassified
205 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
206 2884693830 Nonomuraea phyllanthi WYY166 Isolate Unclassified
207 2887478801 Catellatospora paridis NEAU-CL2 Isolate Rhizosphere
208 2891395885 Microbispora catharanthi CR1-09 Isolate Unclassified
209 2891554331 Microbispora sp. CL1-1 Isolate Unclassified
210 2891562705 Microbispora tritici MT50 Isolate Unclassified
211 2895427314 Nonomuraea sp. PA05 Isolate Unclassified
212 2895442618 Nonomuraea phyllanthi PA1-10 Isolate Unclassified
213 2902582711 Micromonospora sp. AP08 Isolate Unclassified
214 2918501144 Streptomyces sp. PvR006 Isolate Rhizosphere
215 2929219909 Micromonospora sp. R-75348 Hybrid assembly Isolate Unclassified
216 2929226422 Micromonospora sp. R-74116 Hybrid assembly Isolate Unclassified
217 2946072368 Streptomyces achromogenes W4I19-2 Isolate Rhizosphere
218 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
219 2997451912 Streptomyces piniterrae jys28 Isolate Rhizosphere
220 3006486233 Streptomyces sp. BR123 Isolate Rhizosphere
221 649633069 Micromonospora sp. L5 Isolate Unclassified
222 8001781756 Catellatospora tritici NEAU-YM18 Isolate Rhizosphere
223 8003830390 Micromonospora parastrephiae STR1_7 Isolate Rhizosphere
224 8003856774 Micromonospora echinofusca MPMI6 Isolate Unclassified
225 8003870546 Micromonospora tarensis STR1s_6 Isolate Rhizosphere
226 8054704163 Micromonospora trifolii NIE79 Isolate Nodule
227 8054727385 Micromonospora alfalfae MED01 Isolate Nodule
228 8054734606 Micromonospora hortensis NIE111 Isolate Nodule
229 8055066027 Sphaerisporangium corydalis NEAU-YHS15 Isolate Unclassified
230 8055172936 Sphaerisporangium perillae NEAU-ZS1 Isolate Unclassified
231 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 75.78
Metatranscriptomes 1.04
Isolates 23.18

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.35
Nodule 2.08
Rhizoplane 0.69
Rhizosphere 76.12
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25406J46586_10001510 3300003203 Bacteria 10985
2 Ga0070683_100024454 3300005329 Bacteria 5410
3 Ga0070683_100025327 3300005329 Bacteria 5327
4 Ga0070680_100061107 3300005336 Bacteria 3084
5 Ga0070661_100039224 3300005344 Bacteria 3451
6 Ga0070692_10064790 3300005345 Bacteria 1933
7 Ga0070668_100001038 3300005347 Bacteria 19513
8 Ga0070675_100000270 3300005354 Bacteria 34199
9 Ga0070675_100144328 3300005354 Bacteria 2037
10 Ga0070659_100070227 3300005366 Bacteria 2782
11 Ga0070667_100016821 3300005367 Bacteria 6051
12 Ga0070709_10009594 3300005434 Bacteria 5344
13 Ga0070711_100003236 3300005439 Bacteria 9453
14 Ga0070663_100055973 3300005455 Bacteria 2825
15 Ga0070662_100042434 3300005457 Bacteria 3249
16 Ga0070681_10140129 3300005458 Bacteria 2348
17 Ga0068867_100064333 3300005459 Bacteria 2727
18 Ga0070679_100168754 3300005530 Bacteria 2161
19 Ga0070684_100028154 3300005535 Bacteria 4751
20 Ga0070684_100067188 3300005535 Bacteria 3148
21 Ga0070665_100142215 3300005548 Bacteria 2402
22 Ga0070664_100001748 3300005564 Bacteria 17393
23 Ga0068857_100002633 3300005577 Bacteria 14733
24 Ga0068857_100304202 3300005577 Bacteria 1470
25 Ga0068852_100108046 3300005616 Bacteria 2525
26 Ga0068859_100324549 3300005617 Bacteria 1633
27 Ga0068864_100203300 3300005618 Bacteria 1821
28 Ga0068866_10033398 3300005718 Bacteria 2496
29 Ga0068861_100032162 3300005719 Bacteria 3860
30 Ga0068858_100000004 3300005842 Bacteria 336234
31 Ga0068858_100032898 3300005842 Bacteria 4815
32 Ga0068860_100033236 3300005843 Bacteria 4951
33 Ga0068862_100012649 3300005844 Bacteria 6984
34 Ga0081540_1002309 3300005983 Bacteria 15641
35 Ga0081540_1017058 3300005983 Bacteria 4513
36 Ga0081539_10000253 3300005985 Bacteria 124747
37 Ga0081539_10000364 3300005985 Bacteria 99066
38 Ga0081539_10002017 3300005985 Bacteria 30714
39 Ga0081539_10011370 3300005985 Bacteria 7045
40 Ga0070716_100012827 3300006173 Bacteria 4259
41 Ga0075428_100000984 3300006844 Bacteria 30156
42 Ga0075428_100005115 3300006844 Bacteria 14572
43 Ga0075428_100016960 3300006844 Bacteria 8044
44 Ga0075430_100000909 3300006846 Bacteria 23207
45 Ga0075430_100038099 3300006846 Bacteria 4074
46 Ga0075430_100099893 3300006846 Bacteria 2424
47 Ga0075431_100004163 3300006847 Bacteria 14136
48 Ga0075431_100257115 3300006847 Bacteria 1773
49 Ga0075429_100000467 3300006880 Bacteria 30156
50 Ga0075429_100005931 3300006880 Bacteria 10547
51 Ga0075429_100018353 3300006880 Bacteria 6058
52 Ga0097620_100324534 3300006931 Bacteria 1633
53 Ga0111539_10014557 3300009094 Bacteria 9822
54 Ga0105245_10073816 3300009098 Bacteria 3103
55 Ga0105245_10146778 3300009098 Bacteria 2226
56 Ga0114129_10000059 3300009147 Bacteria 98984
57 Ga0114129_10001122 3300009147 Bacteria 35346
58 Ga0114129_10007122 3300009147 Bacteria 15915
59 Ga0114129_10031236 3300009147 Bacteria 7532
60 Ga0157370_10171938 3300013104 Bacteria 2014
61 Ga0157369_10078054 3300013105 Bacteria 3548
62 Ga0157372_10555974 3300013307 Bacteria 1338
63 Ga0157375_10410399 3300013308 Bacteria 1521
64 Ga0157379_10000009 3300014968 Bacteria 131645
65 Ga0206354_10602730 3300020081 Bacteria 6179
66 Ga0206353_10164875 3300020082 Bacteria 8096
67 Ga0213875_10000582 3300021388 Bacteria 29614
68 Ga0224712_10003131 3300022467 Bacteria 4232
69 Ga0207692_10000976 3300025898 Bacteria 10409
70 Ga0207692_10114526 3300025898 Bacteria 1500
71 Ga0207699_10003631 3300025906 Bacteria 7374
72 Ga0207705_10013173 3300025909 Bacteria 5967
73 Ga0207707_10032217 3300025912 Bacteria 4588
74 Ga0207663_10003895 3300025916 Bacteria 7375
75 Ga0207660_10014990 3300025917 Bacteria 5108
76 Ga0207649_10066156 3300025920 Bacteria 2290
77 Ga0207659_10003810 3300025926 Bacteria 9094
78 Ga0207664_10003575 3300025929 Bacteria 10389
79 Ga0207644_10087646 3300025931 Bacteria 2314
80 Ga0207706_10023719 3300025933 Bacteria 5506
81 Ga0207709_10032264 3300025935 Bacteria 3066
82 Ga0207665_10009592 3300025939 Bacteria 6356
83 Ga0207689_10004062 3300025942 Bacteria 13297
84 Ga0207689_10097364 3300025942 Bacteria 2417
85 Ga0207661_10001637 3300025944 Bacteria 15255
86 Ga0207661_10010947 3300025944 Bacteria 6549
87 Ga0207679_10010188 3300025945 Bacteria 6048
88 Ga0207668_10002050 3300025972 Bacteria 11750
89 Ga0207668_10188435 3300025972 Bacteria 1633
90 Ga0207703_10000011 3300026035 Bacteria 336248
91 Ga0207703_10017357 3300026035 Bacteria 5619
92 Ga0207678_10057553 3300026067 Bacteria 3345
93 Ga0207708_10009685 3300026075 Bacteria 7147
94 Ga0207641_10113195 3300026088 Bacteria 2409
95 Ga0207641_10311764 3300026088 Bacteria 1489
96 Ga0207648_10113090 3300026089 Bacteria 2384
97 Ga0207676_10215192 3300026095 Bacteria 1708
98 Ga0207674_10004493 3300026116 Bacteria 16764
99 Ga0207674_10006605 3300026116 Bacteria 13633
100 Ga0207675_100058116 3300026118 Bacteria 3609
101 Ga0207683_10005428 3300026121 Bacteria 10922
102 Ga0207698_10086050 3300026142 Bacteria 2555
103 Ga0268266_10027799 3300028379 Bacteria 4809
104 Ga0268266_10094542 3300028379 Bacteria 2624
105 Ga0268264_10028786 3300028381 Bacteria 4548
106 Ga0307515_10000356 3300028794 Bacteria 112492
107 Ga0307515_10077729 3300028794 Bacteria 4378
108 Ga0307515_10125774 3300028794 Bacteria 2865
109 Ga0307512_10002916 3300030522 Bacteria 20710
110 Ga0265340_10002543 3300031247 Bacteria 10369
111 Ga0307513_10000561 3300031456 Bacteria 53247
112 Ga0307513_10008683 3300031456 Bacteria 12947
113 Ga0307509_10049738 3300031507 Bacteria 4491
114 Ga0307408_100012043 3300031548 Bacteria 5726
115 Ga0307508_10005453 3300031616 Bacteria 12094
116 Ga0307508_10030062 3300031616 Bacteria 4909
117 Ga0307508_10108457 3300031616 Bacteria 2376
118 Ga0307516_10006104 3300031730 Bacteria 14218
119 Ga0307516_10028209 3300031730 Bacteria 5682
120 Ga0307516_10046694 3300031730 Bacteria 4271
121 Ga0307413_10135019 3300031824 Bacteria 1695
122 Ga0326468_10001075 3300031889 Bacteria 2551
123 Ga0307406_10057513 3300031901 Bacteria 2495
124 Ga0307406_10059147 3300031901 Bacteria 2466
125 Ga0307406_10075750 3300031901 Bacteria 2221
126 Ga0307406_10101690 3300031901 Bacteria 1959
127 Ga0307409_100003012 3300031995 Bacteria 8993
128 Ga0307409_100058701 3300031995 Bacteria 2990
129 Ga0307409_100121719 3300031995 Bacteria 2211
130 Ga0307416_100026866 3300032002 Bacteria 4250
131 Ga0307416_100183714 3300032002 Bacteria 1963
132 Ga0307415_100015084 3300032126 Bacteria 4564
133 Ga0307415_100047012 3300032126 Bacteria 2903
134 Ga0373940_0003600 3300035088 Bacteria 3182
135 Ga0373951_0000240 3300035091 Bacteria 18562
136 Ga0373935_0015038 3300035692 Bacteria 4673
137 Ga0395900_0001460 3300037418 Bacteria 28192
138 Ga0395905_0002907 3300037471 Bacteria 18691
139 Ga0436364_1314906 3300037853 Bacteria 24323
140 Ga0395901_0026389 3300038443 Bacteria 5964
141 Ga0395901_0065864 3300038443 Bacteria 3773
142 Ga0451833_0529355 3300041491 Bacteria 2015
143 Ga0451843_0011695 3300041509 Bacteria 2016
144 Ga0451853_2192330 3300041512 Bacteria 3928
145 Ga0439446_0041926 3300042156 Bacteria 1350
146 Ga0466969_0009920 3300044656 Bacteria 5048
147 Ga0466966_0008533 3300044684 Bacteria 6784
148 Ga0466966_0028821 3300044684 Bacteria 3614
149 Ga0466966_0107555 3300044684 Bacteria 1721
150 Ga0466961_0004632 3300044693 Bacteria 8630
151 Ga0466957_0024279 3300044842 Bacteria 3587
152 Ga0466959_0015618 3300045049 Bacteria 5535
153 Ga0495592_0000934 3300046454 Bacteria 20303
154 Ga0495638_0020760 3300046460 Bacteria 4337
155 Ga0495651_0000797 3300046462 Bacteria 24454
156 Ga0495653_0004369 3300046463 Bacteria 11427
157 Ga0495580_0027093 3300046472 Bacteria 4173
158 Ga0495639_0038341 3300046475 Bacteria 2152
159 Ga0495662_0000196 3300046476 Bacteria 24887
160 Ga0495664_0009727 3300046477 Bacteria 5387
161 Ga0495594_0072954 3300046499 Bacteria 1910
162 Ga0495606_0005923 3300046507 Bacteria 11489
163 Ga0495608_0005449 3300046511 Bacteria 9100
164 Ga0495628_0008369 3300046516 Bacteria 8877
165 Ga0495630_0013514 3300046517 Bacteria 5937
166 Ga0495666_0000495 3300046526 Bacteria 17520
167 Ga0495652_0004316 3300046529 Bacteria 13627
168 Ga0495665_0003613 3300046531 Bacteria 8396
169 Ga0495587_0004204 3300046536 Bacteria 9528
170 Ga0495667_0001285 3300046559 Bacteria 16432
171 Ga0495668_0001325 3300046616 Bacteria 24344
172 Ga0495625_0001056 3300046660 Bacteria 36110
173 Ga0495635_0009886 3300046663 Bacteria 6668
174 Ga0495588_0050587 3300046674 Bacteria 2138
175 Ga0495657_0013978 3300046675 Bacteria 5896
176 Ga0495623_0000874 3300046679 Bacteria 20426
177 Ga0495613_0001966 3300046689 Bacteria 15598
178 Ga0495600_0001051 3300046809 Bacteria 14951
179 Ga0495581_0002113 3300047315 Bacteria 11192
180 Ga0495604_0000328 3300047317 Bacteria 42633
181 Ga0495680_0055098 3300047322 Bacteria 3085
182 Ga0495683_0071656 3300047323 Bacteria 1700
183 Ga0495675_0007824 3300047444 Bacteria 6598
184 Ga0495675_0058206 3300047444 Bacteria 2451
185 Ga0495684_0015149 3300047471 Bacteria 5937
186 Ga0495626_0000563 3300048091 Bacteria 36858
187 Ga0496105_0201426 3300048908 Bacteria 1625
188 Ga0496108_0000130 3300048911 Bacteria 74276
189 Ga0496126_0104846 3300048929 Bacteria 2470
190 Ga0501031_0009503 3300049568 Bacteria 6327
191 Ga0501033_0001301 3300049570 Bacteria 22178
192 Ga0501033_0094058 3300049570 Bacteria 2192
193 Ga0501036_0001316 3300049572 Bacteria 19053
194 Ga0501036_0153491 3300049572 Bacteria 1942
195 Ga0501041_0121671 3300049577 Bacteria 1622
196 Ga0501046_0054751 3300049580 Bacteria 3137
197 Ga0501048_0035279 3300049582 Bacteria 3601
198 Ga0501075_0057577 3300049591 Bacteria 2926
199 Ga0501076_0010989 3300049592 Bacteria 6732
200 Ga0501077_0039278 3300049593 Bacteria 3015
201 Ga0501035_0020541 3300049822 Bacteria 6065
202 Ga0501045_0008882 3300049824 Bacteria 7016
203 nmdc:mga05p37_183_c1 3300050507 Bacteria 61506
204 nmdc:mga05p37_205259_c1 3300050507 Bacteria 2384
205 nmdc:mga05p37_22623_c1 3300050507 Bacteria 7623
206 nmdc:mga05p37_23652_c1 3300050507 Bacteria 7459
207 nmdc:mga05p37_6244_c1 3300050507 Bacteria 14030
208 nmdc:mga09592_14097_c1 3300050508 Bacteria 6525
209 nmdc:mga09592_38_c1 3300050508 Bacteria 29351
210 nmdc:mga0qj67_31_c3 3300050509 Bacteria 66411
211 nmdc:mga0qj67_4588_c1 3300050509 Bacteria 9427
212 nmdc:mga0qj67_92308_c1 3300050509 Bacteria 2434
213 nmdc:mga06r32_15609_c1 3300050510 Bacteria 6900
214 nmdc:mga06r32_19_c1 3300050510 Bacteria 98901
215 nmdc:mga06r32_266911_c1 3300050510 Bacteria 1699
216 nmdc:mga06r32_90661_c1 3300050510 Bacteria 2987
217 nmdc:mga08y16_20233_c1 3300050511 Bacteria 7025
218 Ga0495601_0004556 3300053077 Bacteria 8013
219 Ga0495619_0005137 3300053085 Bacteria 8310
220 Ga0500616_0000832 3300053153 Bacteria 34657
221 Ga0466962_0001407 3300061719 Bacteria 11193
222 Ga0530510_0074119 3300061734 Bacteria 2471
223 2995464637 2995463766 Bacteria 8577691
224 2501945125 2501939600 Bacteria 6907073
225 2515495127 2515154088 Bacteria 5526283
226 2515719127 2515154129 Bacteria 5584369
227 2515754918 2515154137 Bacteria 5711575
228 2516083334 2515154202 Bacteria 5471270
229 2516088561 2515154203 Bacteria 5458536
230 2623590823 2622736626 Bacteria 7181580
231 2644014999 2643221601 Bacteria 7493239
232 2644176915 2643221631 Bacteria 8168043
233 2644435763 2643221678 Bacteria 9540101
234 2676483543 2675903059 Bacteria 8644972
235 2676487902 2675903060 Bacteria 10051191
236 2753268315 2751185782 Bacteria 11227053
237 2772644201 2772190715 Bacteria 6959372
238 2819743266 2818991472 Bacteria 10089953
239 2831936299 2831935698 Bacteria 5963223
240 2832010520 2832004796 Bacteria 6538017
241 2855676430 2855670206 Bacteria 7120389
242 2855678648 2855676851 Bacteria 7063653
243 2855689061 2855683550 Bacteria 7134265
244 2856744302 2856741275 Bacteria 8096094
245 2856864486 2856858025 Bacteria 7255264
246 2857289321 2857288857 Bacteria 7189066
247 2858855167 2858848962 Bacteria 6963058
248 2858868997 2858868258 Bacteria 7683772
249 2858888732 2858882152 Bacteria 7230291
250 2858888985 2858888857 Bacteria 7060307
251 2858897421 2858895516 Bacteria 7378898
252 2858905758 2858902515 Bacteria 7086037
253 2866066442 2866065130 Bacteria 6518152
254 2867303534 2867302475 Bacteria 7087181
255 2867316113 2867312974 Bacteria 7058875
256 2867320979 2867319477 Bacteria 7069771
257 2867511769 2867507094 Bacteria 6506033
258 2869054341 2869048445 Bacteria 6875584
259 2869067401 2869061728 Bacteria 7112407
260 2869074513 2869068681 Bacteria 7205615
261 2873320795 2873314349 Bacteria 8512634
262 2880489679 2880489317 Bacteria 7096270
263 2880496024 2880495981 Bacteria 7340502
264 2884697572 2884693830 Bacteria 11273186
265 2887481129 2887478801 Bacteria 8972725
266 2891403074 2891395885 Bacteria 9251614
267 2891554607 2891554331 Bacteria 8812224
268 2891564619 2891562705 Bacteria 8039471
269 2895438134 2895427314 Bacteria 13147766
270 2895447634 2895442618 Bacteria 11027144
271 2902583433 2902582711 Bacteria 6187705
272 2918503170 2918501144 Bacteria 8668083
273 2929224698 2929219909 Bacteria 6984360
274 2929232360 2929226422 Bacteria 7248583
275 2946074568 2946072368 Bacteria 8999607
276 2996227567 2996221748 Bacteria 6799777
277 2997458568 2997451912 Bacteria 8492419
278 3006487121 3006486233 Bacteria 8157040
279 649813986 649633069 Bacteria 6962533
280 8001789938 8001781756 Bacteria 9586736
281 8003831493 8003830390 Bacteria 6541657
282 8003859451 8003856774 Bacteria 7675274
283 8003875944 8003870546 Bacteria 7396674
284 8054707768 8054704163 Bacteria 7247792
285 8054732788 8054727385 Bacteria 7558670
286 8054739023 8054734606 Bacteria 6947278
287 8055067365 8055066027 Bacteria 9479577
288 8055179739 8055172936 Bacteria 9305943
289 8055413142 8055412473 Bacteria 6257500
290 JGI25406J46586_10001510
291 Ga0070683_100024454
292 Ga0070683_100025327
293 Ga0070680_100061107
294 Ga0070661_100039224
295 Ga0070692_10064790
296 Ga0070668_100001038
297 Ga0070675_100000270
298 Ga0070675_100144328
299 Ga0070659_100070227
300 Ga0070667_100016821
301 Ga0070709_10009594
302 Ga0070711_100003236
303 Ga0070663_100055973
304 Ga0070662_100042434
305 Ga0070681_10140129
306 Ga0068867_100064333
307 Ga0070679_100168754
308 Ga0070684_100028154
309 Ga0070684_100067188
310 Ga0070665_100142215
311 Ga0070664_100001748
312 Ga0068857_100002633
313 Ga0068857_100304202
314 Ga0068852_100108046
315 Ga0068859_100324549
316 Ga0068864_100203300
317 Ga0068866_10033398
318 Ga0068861_100032162
319 Ga0068858_100000004
320 Ga0068858_100032898
321 Ga0068860_100033236
322 Ga0068862_100012649
323 Ga0081540_1002309
324 Ga0081540_1017058
325 Ga0081539_10000253
326 Ga0081539_10000364
327 Ga0081539_10002017
328 Ga0081539_10011370
329 Ga0070716_100012827
330 Ga0075428_100000984
331 Ga0075428_100005115
332 Ga0075428_100016960
333 Ga0075430_100000909
334 Ga0075430_100038099
335 Ga0075430_100099893
336 Ga0075431_100004163
337 Ga0075431_100257115
338 Ga0075429_100000467
339 Ga0075429_100005931
340 Ga0075429_100018353
341 Ga0097620_100324534
342 Ga0111539_10014557
343 Ga0105245_10073816
344 Ga0105245_10146778
345 Ga0114129_10000059
346 Ga0114129_10001122
347 Ga0114129_10007122
348 Ga0114129_10031236
349 Ga0157370_10171938
350 Ga0157369_10078054
351 Ga0157372_10555974
352 Ga0157375_10410399
353 Ga0157379_10000009
354 Ga0206354_10602730
355 Ga0206353_10164875
356 Ga0213875_10000582
357 Ga0224712_10003131
358 Ga0207692_10000976
359 Ga0207692_10114526
360 Ga0207699_10003631
361 Ga0207705_10013173
362 Ga0207707_10032217
363 Ga0207663_10003895
364 Ga0207660_10014990
365 Ga0207649_10066156
366 Ga0207659_10003810
367 Ga0207664_10003575
368 Ga0207644_10087646
369 Ga0207706_10023719
370 Ga0207709_10032264
371 Ga0207665_10009592
372 Ga0207689_10004062
373 Ga0207689_10097364
374 Ga0207661_10001637
375 Ga0207661_10010947
376 Ga0207679_10010188
377 Ga0207668_10002050
378 Ga0207668_10188435
379 Ga0207703_10000011
380 Ga0207703_10017357
381 Ga0207678_10057553
382 Ga0207708_10009685
383 Ga0207641_10113195
384 Ga0207641_10311764
385 Ga0207648_10113090
386 Ga0207676_10215192
387 Ga0207674_10004493
388 Ga0207674_10006605
389 Ga0207675_100058116
390 Ga0207683_10005428
391 Ga0207698_10086050
392 Ga0268266_10027799
393 Ga0268266_10094542
394 Ga0268264_10028786
395 Ga0307515_10000356
396 Ga0307515_10077729
397 Ga0307515_10125774
398 Ga0307512_10002916
399 Ga0265340_10002543
400 Ga0307513_10000561
401 Ga0307513_10008683
402 Ga0307509_10049738
403 Ga0307408_100012043
404 Ga0307508_10005453
405 Ga0307508_10030062
406 Ga0307508_10108457
407 Ga0307516_10006104
408 Ga0307516_10028209
409 Ga0307516_10046694
410 Ga0307413_10135019
411 Ga0326468_10001075
412 Ga0307406_10057513
413 Ga0307406_10059147
414 Ga0307406_10075750
415 Ga0307406_10101690
416 Ga0307409_100003012
417 Ga0307409_100058701
418 Ga0307409_100121719
419 Ga0307416_100026866
420 Ga0307416_100183714
421 Ga0307415_100015084
422 Ga0307415_100047012
423 Ga0373940_0003600
424 Ga0373951_0000240
425 Ga0373935_0015038
426 Ga0395900_0001460
427 Ga0395905_0002907
428 Ga0436364_1314906
429 Ga0395901_0026389
430 Ga0395901_0065864
431 Ga0451833_0529355
432 Ga0451843_0011695
433 Ga0451853_2192330
434 Ga0439446_0041926
435 Ga0466969_0009920
436 Ga0466966_0008533
437 Ga0466966_0028821
438 Ga0466966_0107555
439 Ga0466961_0004632
440 Ga0466957_0024279
441 Ga0466959_0015618
442 Ga0495592_0000934
443 Ga0495638_0020760
444 Ga0495651_0000797
445 Ga0495653_0004369
446 Ga0495580_0027093
447 Ga0495639_0038341
448 Ga0495662_0000196
449 Ga0495664_0009727
450 Ga0495594_0072954
451 Ga0495606_0005923
452 Ga0495608_0005449
453 Ga0495628_0008369
454 Ga0495630_0013514
455 Ga0495666_0000495
456 Ga0495652_0004316
457 Ga0495665_0003613
458 Ga0495587_0004204
459 Ga0495667_0001285
460 Ga0495668_0001325
461 Ga0495625_0001056
462 Ga0495635_0009886
463 Ga0495588_0050587
464 Ga0495657_0013978
465 Ga0495623_0000874
466 Ga0495613_0001966
467 Ga0495600_0001051
468 Ga0495581_0002113
469 Ga0495604_0000328
470 Ga0495680_0055098
471 Ga0495683_0071656
472 Ga0495675_0007824
473 Ga0495675_0058206
474 Ga0495684_0015149
475 Ga0495626_0000563
476 Ga0496105_0201426
477 Ga0496108_0000130
478 Ga0496126_0104846
479 Ga0501031_0009503
480 Ga0501033_0001301
481 Ga0501033_0094058
482 Ga0501036_0001316
483 Ga0501036_0153491
484 Ga0501041_0121671
485 Ga0501046_0054751
486 Ga0501048_0035279
487 Ga0501075_0057577
488 Ga0501076_0010989
489 Ga0501077_0039278
490 Ga0501035_0020541
491 Ga0501045_0008882
492 nmdc:mga05p37_183_c1
493 nmdc:mga05p37_205259_c1
494 nmdc:mga05p37_22623_c1
495 nmdc:mga05p37_23652_c1
496 nmdc:mga05p37_6244_c1
497 nmdc:mga09592_14097_c1
498 nmdc:mga09592_38_c1
499 nmdc:mga0qj67_31_c3
500 nmdc:mga0qj67_4588_c1
501 nmdc:mga0qj67_92308_c1
502 nmdc:mga06r32_15609_c1
503 nmdc:mga06r32_19_c1
504 nmdc:mga06r32_266911_c1
505 nmdc:mga06r32_90661_c1
506 nmdc:mga08y16_20233_c1
507 Ga0495601_0004556
508 Ga0495619_0005137
509 Ga0500616_0000832
510 Ga0466962_0001407
511 Ga0530510_0074119
512 2995464637
513 2501945125
514 2515495127
515 2515719127
516 2515754918
517 2516083334
518 2516088561
519 2623590823
520 2644014999
521 2644176915
522 2644435763
523 2676483543
524 2676487902
525 2753268315
526 2772644201
527 2819743266
528 2831936299
529 2832010520
530 2855676430
531 2855678648
532 2855689061
533 2856744302
534 2856864486
535 2857289321
536 2858855167
537 2858868997
538 2858888732
539 2858888985
540 2858897421
541 2858905758
542 2866066442
543 2867303534
544 2867316113
545 2867320979
546 2867511769
547 2869054341
548 2869067401
549 2869074513
550 2873320795
551 2880489679
552 2880496024
553 2884697572
554 2887481129
555 2891403074
556 2891554607
557 2891564619
558 2895438134
559 2895447634
560 2902583433
561 2918503170
562 2929224698
563 2929232360
564 2946074568
565 2996227567
566 2997458568
567 3006487121
568 649813986
569 8001789938
570 8003831493
571 8003859451
572 8003875944
573 8054707768
574 8054732788
575 8054739023
576 8055067365
577 8055179739
578 8055413142

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01882

DUF58

Protein of unknown function DUF58

221

304

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
8oxv-assembly1.cif.gz_A transglutaminase 3 zymogen in complex with dh patient-derived fab dh63-b02 0.8071 67 171
7tw1-assembly1.cif.gz_E cryo-em structure of human band 3-protein 4.2 complex (b2p2vertical) 0.7965 68 175
1ex0-assembly1.cif.gz_B human factor xiii, mutant w279f zymogen 0.7936 68 176
1f13-assembly1.cif.gz_A recombinant human cellular coagulation factor xiii 0.7909 68 171
1ggt-assembly1.cif.gz_B three-dimensional structure of a transglutaminase: human blood coagulation factor xiii 0.788 68 164
ID Description Score Start End Superfamily
af_A4HUB1_833_917_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8414 67 149 2.60.40.10
af_A4I662_22_131_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.819 62 163 2.60.40.10
af_A4HUB1_833_917_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8148 67 149 2.60.40.10
af_Q57965_26_125_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.8011 67 172 2.60.40.10
af_F1QC84_628_725_2.60.40.10 Mainly Beta;Sandwich;Immunoglobulin-like;Immunoglobulins 0.7987 68 172 2.60.40.10
ID Description Score Start End GO Terms
AF-W6KH16-F1-model_v4 Translocon-associated protein subunit beta 0.8467 64 174 GO:0005783
GO:0016020
AF-A0A7X4B3L5-F1-model_v4 DUF11 domain-containing protein 0.8376 64 165 GO:0016020
AF-A0A2W6DU78-F1-model_v4 DUF58 domain-containing protein 0.8343 9 416 GO:0016020
AF-D3CZV9-F1-model_v4 DUF58 domain-containing protein 0.8316 7 436 GO:0016020
AF-A0A7W9MFH6-F1-model_v4 Uncharacterized protein (DUF58 family) 0.8305 12 432 GO:0016020

Map