F388819

General Info

Members Datasets Scaffolds Average Seq Length
288 174 572 390

Family's Representative Sequence

Representative Sequence 3300048912|Ga0496109_0385766|Ga0496109_0385766_32_1309
Length 425
Sequence MWAPAYGSWERRSRRTENKYGNRGRQDLPAADLSFPHERRGVVTTIKGATAIVGVAESDQIGRVPDKPAIMLHAEAARAALAEAGLTKDDVDGLFTAGVSTLDLGEYLGIEPNVTDTTAVGGSSFVIHIAHAATAIATGRCEVALVTHGESGRSRVGMMPYPASRDSLRGQFETPFGIPTPVGAYALACSRHMYEYGTTKEQLAEIAVATRKWAMLNPKAMMRDPITIEDVLNSRPISWPFNLLDCCLVTDAGGAYVMTSTERAKSLKQKPVVVLGVGEGHDHAMISQMPSLTAFAARHSGRRAFEMAGVTRADIDLAMIYDSFTYTVLLSLEELGFCAKGEGGAFVSNQRTAPGGEFPMNTNGGGLSYTHSGMYGMFAVIEGVRQVRGDYADQGIRQVPNCELAVVHGTGGVLSSAGTAILGRV

Samples

Sample ID Description Type Environment
1 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
2 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
3 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
4 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
5 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
8 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
9 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
10 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
11 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
14 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
22 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
25 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
26 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
27 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
28 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
29 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
30 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
31 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
32 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
35 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
36 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
39 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
40 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
45 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
46 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
47 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
48 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
49 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
50 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
51 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
52 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027462 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) (version 2) Metagenome Rhizosphere
78 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
80 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
82 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
83 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
84 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
85 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
86 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
87 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
88 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
89 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
90 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
91 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
92 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
93 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
94 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
95 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
96 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
97 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
98 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
99 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
100 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
101 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
102 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
103 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
104 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
105 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
106 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
107 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
108 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
109 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
110 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
111 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
112 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
113 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
114 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
115 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
116 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
117 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
118 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
119 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
120 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
121 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
122 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
123 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
124 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
125 3300049517 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G24_B_5_control Metagenome Rhizosphere
126 3300049523 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J25_B_7_control Metagenome Rhizosphere
127 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
128 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
129 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
130 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
131 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
132 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
133 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
134 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
135 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
136 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
137 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
140 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
141 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
142 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
143 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
144 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
145 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
146 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
147 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
148 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
149 3300049653 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_A_0_control Metagenome Rhizosphere
150 3300049662 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F2_A_2_control Metagenome Rhizosphere
151 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
152 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
153 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
154 3300049778 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I22_A_5_control Metagenome Rhizosphere
155 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
157 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
158 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
159 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
160 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
161 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
162 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
163 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
164 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
165 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
166 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
167 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
168 3300053084 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL2_65_22 rhizosphere Metagenome Rhizosphere
169 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
170 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
171 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
172 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
173 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
174 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.26
Metatranscriptomes 1.74
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.08
Nodule 0
Rhizoplane 4.17
Rhizosphere 93.4
Stem 0
Stem Tuber 0
Unclassified 6.94

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0496109_0385766 3300048912 Bacteria 1324
2 JGI25405J52794_10013047 3300003911 Bacteria 1607
3 Ga0058861_12028857 3300004800 Bacteria 2653
4 Ga0065712_10012006 3300005290 Bacteria 2915
5 Ga0065715_10153999 3300005293 Unclassified 1697
6 Ga0070670_100010080 3300005331 Bacteria 8063
7 Ga0070677_10060262 3300005333 Unclassified 1563
8 Ga0070680_100043379 3300005336 Unclassified 3654
9 Ga0070659_100167833 3300005366 Bacteria 1796
10 Ga0070703_10029874 3300005406 Unclassified 1639
11 Ga0070709_10157407 3300005434 Bacteria 1576
12 Ga0070708_100113965 3300005445 Bacteria 2487
13 Ga0070708_100142369 3300005445 Bacteria 2224
14 Ga0070662_100012936 3300005457 Bacteria 5544
15 Ga0070681_10180022 3300005458 Bacteria 2035
16 Ga0070681_10331062 3300005458 Bacteria 1432
17 Ga0070706_100004648 3300005467 Bacteria 13181
18 Ga0070707_100010676 3300005468 Bacteria 8555
19 Ga0070698_100017722 3300005471 Bacteria 7502
20 Ga0070698_100172327 3300005471 Bacteria 2104
21 Ga0070679_100018555 3300005530 Bacteria 6752
22 Ga0070697_100017242 3300005536 Bacteria 5678
23 Ga0070697_100104713 3300005536 Bacteria 2353
24 Ga0070672_100034315 3300005543 Bacteria 3850
25 Ga0070695_100070668 3300005545 Bacteria 2284
26 Ga0070696_100213970 3300005546 Unclassified 1444
27 Ga0070665_100001062 3300005548 Bacteria 34272
28 Ga0070704_100060860 3300005549 Bacteria 2699
29 Ga0068857_100062857 3300005577 Bacteria 3301
30 Ga0068864_100239236 3300005618 Unclassified 1682
31 Ga0081455_10000163 3300005937 Bacteria 82001
32 Ga0081455_10002784 3300005937 Bacteria 20599
33 Ga0081455_10004562 3300005937 Bacteria 15461
34 Ga0081455_10074835 3300005937 Bacteria 2795
35 Ga0081538_10002347 3300005981 Bacteria 18644
36 Ga0081538_10008081 3300005981 Bacteria 8981
37 Ga0081538_10037040 3300005981 Bacteria 3173
38 Ga0081539_10000298 3300005985 Bacteria 111938
39 Ga0081539_10117883 3300005985 Bacteria 1324
40 Ga0075364_10162495 3300006051 Bacteria 1508
41 Ga0075432_10006877 3300006058 Bacteria 3874
42 Ga0075367_10162831 3300006178 Bacteria 1387
43 Ga0075428_100112190 3300006844 Bacteria 2969
44 Ga0075428_100153976 3300006844 Bacteria 2497
45 Ga0075428_100161578 3300006844 Bacteria 2431
46 Ga0075430_100023296 3300006846 Bacteria 5268
47 Ga0075430_100041629 3300006846 Bacteria 3886
48 Ga0075430_100082053 3300006846 Bacteria 2701
49 Ga0075430_100093109 3300006846 Bacteria 2519
50 Ga0075430_100129976 3300006846 Bacteria 2099
51 Ga0075431_100003181 3300006847 Bacteria 15876
52 Ga0075431_100020077 3300006847 Bacteria 6823
53 Ga0075431_100117248 3300006847 Bacteria 2747
54 Ga0075431_100127176 3300006847 Bacteria 2629
55 Ga0075431_100201234 3300006847 Bacteria 2037
56 Ga0075431_100355528 3300006847 Bacteria 1472
57 Ga0075433_10009525 3300006852 Bacteria 7765
58 Ga0075433_10044863 3300006852 Bacteria 3842
59 Ga0075433_10247329 3300006852 Bacteria 1583
60 Ga0075434_100001919 3300006871 Bacteria 18022
61 Ga0075434_100008988 3300006871 Bacteria 9307
62 Ga0075434_100185043 3300006871 Unclassified 2103
63 Ga0075429_100011516 3300006880 Bacteria 7669
64 Ga0075429_100016097 3300006880 Bacteria 6477
65 Ga0075436_100028143 3300006914 Unclassified 3867
66 Ga0075435_100001681 3300007076 Bacteria 14367
67 Ga0105240_10020312 3300009093 Bacteria 8863
68 Ga0111539_10021486 3300009094 Bacteria 7942
69 Ga0111539_10038213 3300009094 Bacteria 5791
70 Ga0111539_10047564 3300009094 Bacteria 5127
71 Ga0111539_10184032 3300009094 Bacteria 2440
72 Ga0114129_10001482 3300009147 Bacteria 31796
73 Ga0114129_10009967 3300009147 Bacteria 13544
74 Ga0114129_10018618 3300009147 Bacteria 9886
75 Ga0114129_10056421 3300009147 Bacteria 5501
76 Ga0114129_10197131 3300009147 Bacteria 2730
77 Ga0114129_10263006 3300009147 Unclassified 2311
78 Ga0114129_10270349 3300009147 Bacteria 2274
79 Ga0114129_10457992 3300009147 Bacteria 1672
80 Ga0114129_10691430 3300009147 Bacteria 1312
81 Ga0105246_10057758 3300011119 Bacteria 2686
82 Ga0157374_10130492 3300013296 Bacteria 2432
83 Ga0157378_10138352 3300013297 Unclassified 2259
84 Ga0163162_10077667 3300013306 Bacteria 3384
85 Ga0163162_10112035 3300013306 Unclassified 2827
86 Ga0163162_10322493 3300013306 Bacteria 1677
87 Ga0206356_10864827 3300020070 Bacteria 3125
88 Ga0206349_1250057 3300020075 Bacteria 1729
89 Ga0206352_10217348 3300020078 Bacteria 2098
90 Ga0224712_10006121 3300022467 Bacteria 3405
91 Ga0207682_10062125 3300025893 Unclassified 1565
92 Ga0207680_10071094 3300025903 Bacteria 2156
93 Ga0207645_10007134 3300025907 Bacteria 7934
94 Ga0207684_10005506 3300025910 Bacteria 11664
95 Ga0207684_10013251 3300025910 Bacteria 7135
96 Ga0207707_10000695 3300025912 Bacteria 33344
97 Ga0207707_10017139 3300025912 Bacteria 6312
98 Ga0207707_10184756 3300025912 Bacteria 1819
99 Ga0207695_10259147 3300025913 Bacteria 1637
100 Ga0207663_10090305 3300025916 Bacteria 2031
101 Ga0207660_10055643 3300025917 Unclassified 2828
102 Ga0207657_10037560 3300025919 Bacteria 4322
103 Ga0207652_10012915 3300025921 Bacteria 6756
104 Ga0207652_10063560 3300025921 Bacteria 3192
105 Ga0207646_10008902 3300025922 Bacteria 9999
106 Ga0207646_10014010 3300025922 Bacteria 7633
107 Ga0207659_10212086 3300025926 Bacteria 1553
108 Ga0207687_10220355 3300025927 Bacteria 1493
109 Ga0207690_10116990 3300025932 Unclassified 1929
110 Ga0207706_10021182 3300025933 Bacteria 5841
111 Ga0207704_10238517 3300025938 Bacteria 1357
112 Ga0207665_10181920 3300025939 Bacteria 1523
113 Ga0207691_10031926 3300025940 Bacteria 4915
114 Ga0207689_10164301 3300025942 Bacteria 1829
115 Ga0207667_10175119 3300025949 Bacteria 2204
116 Ga0207651_10169938 3300025960 Bacteria 1718
117 Ga0207708_10080215 3300026075 Bacteria 2508
118 Ga0207676_10133701 3300026095 Unclassified 2113
119 Ga0207674_10158153 3300026116 Bacteria 2221
120 Ga0207683_10036645 3300026121 Bacteria 4272
121 Ga0210000_1001786 3300027462 Bacteria 3040
122 Ga0209974_10003126 3300027876 Bacteria 5995
123 Ga0207428_10015917 3300027907 Bacteria 6486
124 Ga0207428_10093748 3300027907 Bacteria 2328
125 Ga0268266_10000288 3300028379 Bacteria 82716
126 Ga0265338_10007494 3300028800 Bacteria 13521
127 Ga0265338_10103006 3300028800 Bacteria 2320
128 Ga0265330_10002332 3300031235 Bacteria 10408
129 Ga0265330_10021100 3300031235 Bacteria 2975
130 Ga0265325_10008481 3300031241 Bacteria 6062
131 Ga0265329_10005634 3300031242 Bacteria 5040
132 Ga0265340_10001062 3300031247 Bacteria 15640
133 Ga0265339_10041039 3300031249 Bacteria 2570
134 Ga0265331_10044785 3300031250 Bacteria 2138
135 Ga0307408_100016574 3300031548 Bacteria 4921
136 Ga0307408_100072962 3300031548 Bacteria 2542
137 Ga0265342_10031282 3300031712 Bacteria 3291
138 Ga0307405_10002776 3300031731 Bacteria 7855
139 Ga0307413_10051158 3300031824 Bacteria 2488
140 Ga0307413_10137382 3300031824 Bacteria 1683
141 Ga0307413_10150522 3300031824 Bacteria 1621
142 Ga0307410_10070982 3300031852 Bacteria 2414
143 Ga0307410_10116729 3300031852 Bacteria 1940
144 Ga0307410_10271198 3300031852 Bacteria 1327
145 Ga0307406_10134965 3300031901 Bacteria 1738
146 Ga0307412_10016264 3300031911 Bacteria 4429
147 Ga0307412_10109530 3300031911 Bacteria 1969
148 Ga0307412_10153453 3300031911 Bacteria 1702
149 Ga0307412_10230817 3300031911 Bacteria 1425
150 Ga0307409_100023882 3300031995 Bacteria 4248
151 Ga0307409_100061923 3300031995 Bacteria 2927
152 Ga0307409_100111578 3300031995 Bacteria 2294
153 Ga0307416_100001706 3300032002 Bacteria 12167
154 Ga0307416_100026321 3300032002 Bacteria 4285
155 Ga0307414_10013606 3300032004 Bacteria 4850
156 Ga0307411_10006186 3300032005 Bacteria 5961
157 Ga0307415_100008236 3300032126 Bacteria 5769
158 Ga0307415_100118148 3300032126 Bacteria 1982
159 Ga0373926_0029555 3300035083 Bacteria 1927
160 Ga0373956_0086243 3300035119 Bacteria 1445
161 Ga0373937_0043842 3300036401 Bacteria 4086
162 Ga0373925_0081609 3300037068 Bacteria 2459
163 Ga0436364_0092553 3300037853 Bacteria 9323
164 Ga0439434_0041529 3300042435 Bacteria 1413
165 Ga0453683_0000228 3300044673 Bacteria 75066
166 Ga0466960_0041502 3300044901 Bacteria 2180
167 Ga0451576_0068168 3300045051 Bacteria 3703
168 Ga0451576_0090933 3300045051 Unclassified 3175
169 Ga0451576_0173085 3300045051 Unclassified 2253
170 Ga0495651_0127442 3300046462 Bacteria 1862
171 Ga0495653_0105438 3300046463 Bacteria 2035
172 Ga0495580_0001920 3300046472 Bacteria 18291
173 Ga0495654_0015757 3300046530 Bacteria 4010
174 Ga0495657_0043800 3300046675 Bacteria 3049
175 Ga0495680_0027326 3300047322 Bacteria 4690
176 Ga0495684_0254152 3300047471 Bacteria 1277
177 Ga0495614_0131025 3300048089 Bacteria 1110
178 Ga0496100_0044093 3300048903 Bacteria 2855
179 Ga0496101_0026987 3300048904 Bacteria 3995
180 Ga0496101_0232777 3300048904 Bacteria 1432
181 Ga0496104_0010677 3300048907 Bacteria 8210
182 Ga0496104_0106133 3300048907 Bacteria 2691
183 Ga0496104_0340352 3300048907 Bacteria 1413
184 Ga0496105_0025549 3300048908 Bacteria 4809
185 Ga0496105_0115965 3300048908 Bacteria 2209
186 Ga0496106_0118814 3300048909 Bacteria 2065
187 Ga0496114_0185488 3300048917 Bacteria 1818
188 Ga0496115_0009348 3300048918 Bacteria 7284
189 Ga0501290_001817 3300049513 Bacteria 2829
190 Ga0501294_000001 3300049517 Bacteria 34855
191 Ga0501300_000193 3300049523 Bacteria 9275
192 Ga0501032_0103854 3300049569 Bacteria 1882
193 Ga0501033_0081341 3300049570 Bacteria 2375
194 Ga0501034_0040263 3300049571 Bacteria 4730
195 Ga0501034_0097027 3300049571 Bacteria 2943
196 Ga0501036_0011563 3300049572 Bacteria 7315
197 Ga0501036_0080903 3300049572 Bacteria 2745
198 Ga0501037_0010556 3300049573 Bacteria 6784
199 Ga0501038_0002257 3300049574 Bacteria 17921
200 Ga0501038_0014072 3300049574 Bacteria 7290
201 Ga0501039_0001220 3300049575 Bacteria 18890
202 Ga0501039_0057527 3300049575 Bacteria 3011
203 Ga0501040_0234453 3300049576 Bacteria 1307
204 Ga0501041_0001280 3300049577 Bacteria 13834
205 Ga0501041_0017171 3300049577 Unclassified 4305
206 Ga0501042_0000630 3300049578 Bacteria 18836
207 Ga0501042_0071867 3300049578 Bacteria 2475
208 Ga0501043_0062191 3300049579 Bacteria 2931
209 Ga0501043_0116368 3300049579 Bacteria 2098
210 Ga0501046_0011602 3300049580 Bacteria 7532
211 Ga0501048_0001318 3300049582 Bacteria 18789
212 Ga0501048_0037617 3300049582 Bacteria 3475
213 Ga0501069_0001843 3300049585 Bacteria 10576
214 Ga0501070_0091554 3300049586 Bacteria 2516
215 Ga0501071_0002079 3300049587 Bacteria 12004
216 Ga0501071_0150510 3300049587 Bacteria 1736
217 Ga0501071_0189467 3300049587 Bacteria 1542
218 Ga0501072_0002011 3300049588 Bacteria 15140
219 Ga0501072_0216645 3300049588 Bacteria 1526
220 Ga0501072_0242233 3300049588 Bacteria 1436
221 Ga0501073_0015012 3300049589 Bacteria 5618
222 Ga0501074_0026650 3300049590 Bacteria 4191
223 Ga0501075_0001997 3300049591 Bacteria 13472
224 Ga0501075_0005020 3300049591 Bacteria 9034
225 Ga0501075_0032917 3300049591 Bacteria 3855
226 Ga0501075_0143325 3300049591 Bacteria 1821
227 Ga0501076_0000236 3300049592 Bacteria 33820
228 Ga0501076_0085492 3300049592 Unclassified 2535
229 Ga0501076_0095808 3300049592 Bacteria 2390
230 Ga0501076_0112535 3300049592 Bacteria 2201
231 Ga0501077_0001069 3300049593 Bacteria 16511
232 Ga0501077_0125363 3300049593 Bacteria 1628
233 Ga0501206_000885 3300049653 Bacteria 3692
234 Ga0501222_000073 3300049662 Bacteria 28735
235 Ga0501079_0001897 3300049741 Bacteria 14979
236 Ga0501080_0024774 3300049742 Bacteria 5565
237 Ga0501080_0054692 3300049742 Bacteria 3717
238 Ga0501080_0219133 3300049742 Bacteria 1742
239 Ga0501080_0490516 3300049742 Bacteria 1099
240 Ga0501081_0000229 3300049743 Bacteria 28210
241 Ga0501081_0082718 3300049743 Bacteria 2249
242 Ga0501081_0119423 3300049743 Bacteria 1876
243 Ga0501081_0176754 3300049743 Bacteria 1543
244 Ga0501282_000001 3300049778 Bacteria 101349
245 Ga0501035_0018459 3300049822 Bacteria 6426
246 Ga0501045_0000592 3300049824 Bacteria 22792
247 nmdc:mga00v17_96338_c1 3300050491 Bacteria 1863
248 nmdc:mga05p37_101645_c1 3300050507 Bacteria 3539
249 nmdc:mga05p37_103044_c1 3300050507 Bacteria 3513
250 nmdc:mga05p37_116634_c1 3300050507 Bacteria 3282
251 nmdc:mga05p37_172444_c1 3300050507 Bacteria 2638
252 nmdc:mga05p37_25759_c1 3300050507 Bacteria 7154
253 nmdc:mga05p37_27509_c1 3300050507 Bacteria 6923
254 nmdc:mga05p37_5922_c1 3300050507 Bacteria 14385
255 nmdc:mga09592_27636_c1 3300050508 Bacteria 4709
256 nmdc:mga09592_63241_c1 3300050508 Bacteria 3132
257 nmdc:mga0qj67_102524_c1 3300050509 Bacteria 2307
258 nmdc:mga0qj67_10974_c1 3300050509 Bacteria 6781
259 nmdc:mga0qj67_112617_c1 3300050509 Bacteria 2197
260 nmdc:mga0qj67_17859_c1 3300050509 Bacteria 5398
261 nmdc:mga06r32_170564_c1 3300050510 Bacteria 2160
262 nmdc:mga06r32_51020_c1 3300050510 Bacteria 3959
263 nmdc:mga08y16_16597_c1 3300050511 Bacteria 7745
264 nmdc:mga08y16_315394_c1 3300050511 Bacteria 1610
265 nmdc:mga0n895_135142_c1 3300050512 Bacteria 2492
266 nmdc:mga0n895_24463_c1 3300050512 Bacteria 5692
267 nmdc:mga0n895_24950_c1 3300050512 Bacteria 5643
268 nmdc:mga0n895_404023_c1 3300050512 Bacteria 1381
269 nmdc:mga0rr50_3702_c1 3300050513 Bacteria 8855
270 nmdc:mga08x19_27803_c1 3300050514 Bacteria 3539
271 nmdc:mga0a205_11106_c1 3300050515 Bacteria 8285
272 nmdc:mga0a205_11165_c1 3300050515 Bacteria 8267
273 nmdc:mga0a205_1243_c1 3300050515 Bacteria 21359
274 Ga0495601_0112075 3300053077 Unclassified 1767
275 Ga0495595_0076611 3300053084 Bacteria 1588
276 Ga0500592_000044 3300053116 Bacteria 37849
277 Ga0500604_0025151 3300053151 Bacteria 1710
278 Ga0500627_0000073 3300053158 Bacteria 40574
279 Ga0501084_0003937 3300054114 Bacteria 12095
280 Ga0501084_0115166 3300054114 Bacteria 2260
281 Ga0501082_0001498 3300060353 Bacteria 20564
282 Ga0530510_0002534 3300061734 Bacteria 12552
283 Ga0530510_0005358 3300061734 Bacteria 8876
284 Ga0530510_0006747 3300061734 Bacteria 8003
285 Ga0530510_0033292 3300061734 Bacteria 3711
286 Ga0530510_0148946 3300061734 Bacteria 1727
287 Ga0496109_0385766
288 JGI25405J52794_10013047
289 Ga0058861_12028857
290 Ga0065712_10012006
291 Ga0065715_10153999
292 Ga0070670_100010080
293 Ga0070677_10060262
294 Ga0070680_100043379
295 Ga0070659_100167833
296 Ga0070703_10029874
297 Ga0070709_10157407
298 Ga0070708_100113965
299 Ga0070708_100142369
300 Ga0070662_100012936
301 Ga0070681_10180022
302 Ga0070681_10331062
303 Ga0070706_100004648
304 Ga0070707_100010676
305 Ga0070698_100017722
306 Ga0070698_100172327
307 Ga0070679_100018555
308 Ga0070697_100017242
309 Ga0070697_100104713
310 Ga0070672_100034315
311 Ga0070695_100070668
312 Ga0070696_100213970
313 Ga0070665_100001062
314 Ga0070704_100060860
315 Ga0068857_100062857
316 Ga0068864_100239236
317 Ga0081455_10000163
318 Ga0081455_10002784
319 Ga0081455_10004562
320 Ga0081455_10074835
321 Ga0081538_10002347
322 Ga0081538_10008081
323 Ga0081538_10037040
324 Ga0081539_10000298
325 Ga0081539_10117883
326 Ga0075364_10162495
327 Ga0075432_10006877
328 Ga0075367_10162831
329 Ga0075428_100112190
330 Ga0075428_100153976
331 Ga0075428_100161578
332 Ga0075430_100023296
333 Ga0075430_100041629
334 Ga0075430_100082053
335 Ga0075430_100093109
336 Ga0075430_100129976
337 Ga0075431_100003181
338 Ga0075431_100020077
339 Ga0075431_100117248
340 Ga0075431_100127176
341 Ga0075431_100201234
342 Ga0075431_100355528
343 Ga0075433_10009525
344 Ga0075433_10044863
345 Ga0075433_10247329
346 Ga0075434_100001919
347 Ga0075434_100008988
348 Ga0075434_100185043
349 Ga0075429_100011516
350 Ga0075429_100016097
351 Ga0075436_100028143
352 Ga0075435_100001681
353 Ga0105240_10020312
354 Ga0111539_10021486
355 Ga0111539_10038213
356 Ga0111539_10047564
357 Ga0111539_10184032
358 Ga0114129_10001482
359 Ga0114129_10009967
360 Ga0114129_10018618
361 Ga0114129_10056421
362 Ga0114129_10197131
363 Ga0114129_10263006
364 Ga0114129_10270349
365 Ga0114129_10457992
366 Ga0114129_10691430
367 Ga0105246_10057758
368 Ga0157374_10130492
369 Ga0157378_10138352
370 Ga0163162_10077667
371 Ga0163162_10112035
372 Ga0163162_10322493
373 Ga0206356_10864827
374 Ga0206349_1250057
375 Ga0206352_10217348
376 Ga0224712_10006121
377 Ga0207682_10062125
378 Ga0207680_10071094
379 Ga0207645_10007134
380 Ga0207684_10005506
381 Ga0207684_10013251
382 Ga0207707_10000695
383 Ga0207707_10017139
384 Ga0207707_10184756
385 Ga0207695_10259147
386 Ga0207663_10090305
387 Ga0207660_10055643
388 Ga0207657_10037560
389 Ga0207652_10012915
390 Ga0207652_10063560
391 Ga0207646_10008902
392 Ga0207646_10014010
393 Ga0207659_10212086
394 Ga0207687_10220355
395 Ga0207690_10116990
396 Ga0207706_10021182
397 Ga0207704_10238517
398 Ga0207665_10181920
399 Ga0207691_10031926
400 Ga0207689_10164301
401 Ga0207667_10175119
402 Ga0207651_10169938
403 Ga0207708_10080215
404 Ga0207676_10133701
405 Ga0207674_10158153
406 Ga0207683_10036645
407 Ga0210000_1001786
408 Ga0209974_10003126
409 Ga0207428_10015917
410 Ga0207428_10093748
411 Ga0268266_10000288
412 Ga0265338_10007494
413 Ga0265338_10103006
414 Ga0265330_10002332
415 Ga0265330_10021100
416 Ga0265325_10008481
417 Ga0265329_10005634
418 Ga0265340_10001062
419 Ga0265339_10041039
420 Ga0265331_10044785
421 Ga0307408_100016574
422 Ga0307408_100072962
423 Ga0265342_10031282
424 Ga0307405_10002776
425 Ga0307413_10051158
426 Ga0307413_10137382
427 Ga0307413_10150522
428 Ga0307410_10070982
429 Ga0307410_10116729
430 Ga0307410_10271198
431 Ga0307406_10134965
432 Ga0307412_10016264
433 Ga0307412_10109530
434 Ga0307412_10153453
435 Ga0307412_10230817
436 Ga0307409_100023882
437 Ga0307409_100061923
438 Ga0307409_100111578
439 Ga0307416_100001706
440 Ga0307416_100026321
441 Ga0307414_10013606
442 Ga0307411_10006186
443 Ga0307415_100008236
444 Ga0307415_100118148
445 Ga0373926_0029555
446 Ga0373956_0086243
447 Ga0373937_0043842
448 Ga0373925_0081609
449 Ga0436364_0092553
450 Ga0439434_0041529
451 Ga0453683_0000228
452 Ga0466960_0041502
453 Ga0451576_0068168
454 Ga0451576_0090933
455 Ga0451576_0173085
456 Ga0495651_0127442
457 Ga0495653_0105438
458 Ga0495580_0001920
459 Ga0495654_0015757
460 Ga0495657_0043800
461 Ga0495680_0027326
462 Ga0495684_0254152
463 Ga0495614_0131025
464 Ga0496100_0044093
465 Ga0496101_0026987
466 Ga0496101_0232777
467 Ga0496104_0010677
468 Ga0496104_0106133
469 Ga0496104_0340352
470 Ga0496105_0025549
471 Ga0496105_0115965
472 Ga0496106_0118814
473 Ga0496114_0185488
474 Ga0496115_0009348
475 Ga0501290_001817
476 Ga0501294_000001
477 Ga0501300_000193
478 Ga0501032_0103854
479 Ga0501033_0081341
480 Ga0501034_0040263
481 Ga0501034_0097027
482 Ga0501036_0011563
483 Ga0501036_0080903
484 Ga0501037_0010556
485 Ga0501038_0002257
486 Ga0501038_0014072
487 Ga0501039_0001220
488 Ga0501039_0057527
489 Ga0501040_0234453
490 Ga0501041_0001280
491 Ga0501041_0017171
492 Ga0501042_0000630
493 Ga0501042_0071867
494 Ga0501043_0062191
495 Ga0501043_0116368
496 Ga0501046_0011602
497 Ga0501048_0001318
498 Ga0501048_0037617
499 Ga0501069_0001843
500 Ga0501070_0091554
501 Ga0501071_0002079
502 Ga0501071_0150510
503 Ga0501071_0189467
504 Ga0501072_0002011
505 Ga0501072_0216645
506 Ga0501072_0242233
507 Ga0501073_0015012
508 Ga0501074_0026650
509 Ga0501075_0001997
510 Ga0501075_0005020
511 Ga0501075_0032917
512 Ga0501075_0143325
513 Ga0501076_0000236
514 Ga0501076_0085492
515 Ga0501076_0095808
516 Ga0501076_0112535
517 Ga0501077_0001069
518 Ga0501077_0125363
519 Ga0501206_000885
520 Ga0501222_000073
521 Ga0501079_0001897
522 Ga0501080_0024774
523 Ga0501080_0054692
524 Ga0501080_0219133
525 Ga0501080_0490516
526 Ga0501081_0000229
527 Ga0501081_0082718
528 Ga0501081_0119423
529 Ga0501081_0176754
530 Ga0501282_000001
531 Ga0501035_0018459
532 Ga0501045_0000592
533 nmdc:mga00v17_96338_c1
534 nmdc:mga05p37_101645_c1
535 nmdc:mga05p37_103044_c1
536 nmdc:mga05p37_116634_c1
537 nmdc:mga05p37_172444_c1
538 nmdc:mga05p37_25759_c1
539 nmdc:mga05p37_27509_c1
540 nmdc:mga05p37_5922_c1
541 nmdc:mga09592_27636_c1
542 nmdc:mga09592_63241_c1
543 nmdc:mga0qj67_102524_c1
544 nmdc:mga0qj67_10974_c1
545 nmdc:mga0qj67_112617_c1
546 nmdc:mga0qj67_17859_c1
547 nmdc:mga06r32_170564_c1
548 nmdc:mga06r32_51020_c1
549 nmdc:mga08y16_16597_c1
550 nmdc:mga08y16_315394_c1
551 nmdc:mga0n895_135142_c1
552 nmdc:mga0n895_24463_c1
553 nmdc:mga0n895_24950_c1
554 nmdc:mga0n895_404023_c1
555 nmdc:mga0rr50_3702_c1
556 nmdc:mga08x19_27803_c1
557 nmdc:mga0a205_11106_c1
558 nmdc:mga0a205_11165_c1
559 nmdc:mga0a205_1243_c1
560 Ga0495601_0112075
561 Ga0495595_0076611
562 Ga0500592_000044
563 Ga0500604_0025151
564 Ga0500627_0000073
565 Ga0501084_0003937
566 Ga0501084_0115166
567 Ga0501082_0001498
568 Ga0530510_0002534
569 Ga0530510_0005358
570 Ga0530510_0006747
571 Ga0530510_0033292
572 Ga0530510_0148946

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF22691

Thiolase_C_1

Thiolase C-terminal domain-like

278

424

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
7yvy-assembly3.cif.gz_C crystal structure of thiolase pfc_04095 from pyrococcus furiosus 0.9 6 394
7yvy-assembly1.cif.gz_A crystal structure of thiolase pfc_04095 from pyrococcus furiosus 0.8964 1 396
7yvy-assembly1.cif.gz_A crystal structure of thiolase pfc_04095 from pyrococcus furiosus 0.8941 1 396
6ok1-assembly1.cif.gz_A ltp2-chsh2(duf35) aldolase 0.893 3 394
7yvy-assembly3.cif.gz_C crystal structure of thiolase pfc_04095 from pyrococcus furiosus 0.8928 6 394
ID Description Score Start End Superfamily
af_I6Y3T7_1_386_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.8711 3 394 3.40.47.10
4u4eA00 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.8689 2 396 3.40.47.10
4yzoB00 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.868 8 397 3.40.47.10
af_I6Y3T7_1_386_3.40.47.10 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.8668 3 394 3.40.47.10
4u4eA00 Alpha Beta;3-Layer(aba) Sandwich;Peroxisomal Thiolase; Chain A, domain 1;Thiolase/Chalcone synthase 0.8665 2 396 3.40.47.10
ID Description Score Start End GO Terms
AF-A0A661UQS6-F1-model_v4 Thiolase family protein 0.9495 144 394 GO:0016746
AF-A0A6L3ER44-F1-model_v4 Thiolase family protein 0.9462 147 394 GO:0016746
AF-A0A1F9JE89-F1-model_v4 Thiolase C-terminal domain-containing protein 0.9446 1 394 GO:0016747
AF-A0A661UQS6-F1-model_v4 Thiolase family protein 0.9421 144 394 GO:0016746
AF-A0A2S8M5V1-F1-model_v4 deleted 0.9408 202 394

Map