F388692

General Info

Members Datasets Scaffolds Average Seq Length
288 184 280 325

Family's Representative Sequence

Representative Sequence 3300035090|Ga0373949_0000037|Ga0373949_0000037_196_1299
Length 367
Sequence VKVVSTSALPIDLAGQVTAALPGTVVDVPTAGHVAIDRIDLSDTDALVCLLLDRIDAALLARAPRLRVVANCAVGYDNVDLAAATAAGVCVTNTPDVLTEATAELAFTLLLACARRLGEGERLIRSGAWTGWALDQLLGMGLTGKTLGIIGYGRIGRALARRALGFGMNVIYADPLAKIDDVESEDEDANRPGNLASAELPGAGPRDATRGGVNGPALPVLRGRERPLSIDDVFASADAISLHCPLTPETHHLVNAHRLARMKPSAILVNTARGGCVDEPALIQALRDGRIFGAALDVYSREPEIPPDLLACPRLILAPHIGSATTETRTAMAQLCANAVIAVLRGHRPPNLVNHVTSMESPWSRRS

Samples

Sample ID Description Type Environment
1 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
2 2643221541 Sphingomonas sp. Root50 Isolate Unclassified
3 2643221606 Sphingomonas sp. Root720 Isolate Unclassified
4 2643221671 Sphingomonas sp. Root1294 Isolate Unclassified
5 2775507255 Sphingobium indicum B90A Isolate Rhizosphere
6 2808606404 Sphingobium sp. AEW013 Isolate Rhizosphere
7 2808606405 Sphingobium sp. AEW001 Isolate Rhizosphere
8 2880518877 Sphingobium sp. JAI105 Isolate Rhizosphere
9 2919709256 Sphingobium xenophagum 4256 Isolate Unclassified
10 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
11 3300001915 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C7 Metagenome Rhizosphere
12 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
13 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
14 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
15 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
16 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
17 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
18 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
19 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
20 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
21 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
22 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
23 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
24 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
25 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
26 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
27 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
28 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
29 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
30 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
31 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
32 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
33 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
34 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
35 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
36 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
37 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
38 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
39 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
40 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
41 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
42 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
43 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
44 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
45 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
46 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
47 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
48 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
49 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
50 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
51 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
52 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
53 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
54 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
55 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
56 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
57 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
58 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
60 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
61 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
62 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
63 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
64 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
65 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
66 3300009978 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_199 metaG Metagenome Rhizosphere
67 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
68 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
69 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
70 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
71 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
72 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
73 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
74 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
75 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
76 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
77 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
78 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
111 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
115 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
116 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
117 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
118 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
119 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
120 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
121 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
122 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
123 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
124 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
125 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
126 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
127 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
128 3300039145 Coralloid root microbial communities from Jiquipilas, Chiapas, Mexico - JP6-T1 Metagenome Unclassified
129 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
130 3300046453 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co3_8_57 rhizosphere Metagenome Rhizosphere
131 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
132 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
133 3300046512 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co2_50_17 rhizosphere Metagenome Rhizosphere
134 3300046513 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 rhizosphere Metagenome Rhizosphere
135 3300046519 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co2_51_16 rhizosphere Metagenome Rhizosphere
136 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
137 3300046522 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 rhizosphere Metagenome Rhizosphere
138 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
139 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
140 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
141 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
142 3300047470 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co1_3_5 rhizosphere Metagenome Rhizosphere
143 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
144 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
145 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
146 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
147 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
148 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
149 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
150 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
151 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
152 3300049530 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
153 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
158 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
159 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
160 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
161 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
162 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
163 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
164 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
165 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
166 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
167 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
168 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
169 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
170 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
171 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
172 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
173 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
174 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
175 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
176 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
177 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
178 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
179 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
180 3300053144 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 endosphere Metagenome Endosphere
181 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
182 3300053157 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 endosphere Metagenome Endosphere
183 3300053158 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 endosphere Metagenome Endosphere
184 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere

Type Distribution

Type Percentage (%)
Metagenomes 96.88
Metatranscriptomes 0.35
Isolates 2.78

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.38
Nodule 0
Rhizoplane 1.04
Rhizosphere 82.29
Stem 0
Stem Tuber 0
Unclassified 7.29

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 SwRhRL2b_contig_3789888 2162886007 Bacteria 1374
2 JGI24736J21556_1000868 3300001904 Bacteria 5571
3 JGI24741J21665_1000154 3300001915 Bacteria 19576
4 JGI24740J21852_10001089 3300001979 Bacteria 12273
5 JGI24739J22299_10000294 3300001989 Bacteria 16860
6 JGI24735J21928_10002700 3300002067 Bacteria 6127
7 JGI24738J21930_10001697 3300002075 Bacteria 6028
8 JGI24749J21850_1000227 3300002076 Bacteria 8841
9 JGI24751J29686_10000366 3300002459 Bacteria 15436
10 Ga0065704_10004641 3300005289 Bacteria 5469
11 Ga0065707_10104580 3300005295 Bacteria 2688
12 Ga0065707_10153332 3300005295 Bacteria 1634
13 Ga0070658_10001688 3300005327 Bacteria 18643
14 Ga0070658_10272168 3300005327 Bacteria 1440
15 Ga0070690_100014251 3300005330 Bacteria 4715
16 Ga0070670_100001111 3300005331 Bacteria 21391
17 Ga0070670_100003440 3300005331 Bacteria 13135
18 Ga0070670_100006621 3300005331 Bacteria 9821
19 Ga0070670_100104092 3300005331 Bacteria 2445
20 Ga0068869_100133256 3300005334 Bacteria 1912
21 Ga0068869_100321082 3300005334 Bacteria 1256
22 Ga0070666_10000063 3300005335 Bacteria 80378
23 Ga0070666_10005988 3300005335 Bacteria 7469
24 Ga0070666_10117662 3300005335 Bacteria 1841
25 Ga0070661_100113228 3300005344 Bacteria 2027
26 Ga0070668_100000008 3300005347 Bacteria 137948
27 Ga0070668_100001336 3300005347 Bacteria 17622
28 Ga0070668_100019826 3300005347 Bacteria 5066
29 Ga0070669_100000042 3300005353 Bacteria 123396
30 Ga0070669_100000049 3300005353 Bacteria 115183
31 Ga0070669_100006880 3300005353 Bacteria 8173
32 Ga0070669_100238394 3300005353 Bacteria 1444
33 Ga0070671_100000002 3300005355 Bacteria 292733
34 Ga0070671_100000064 3300005355 Bacteria 72180
35 Ga0070688_100170938 3300005365 Bacteria 1500
36 Ga0070659_100072880 3300005366 Bacteria 2733
37 Ga0070667_100000003 3300005367 Bacteria 447715
38 Ga0070667_100000062 3300005367 Bacteria 143729
39 Ga0070667_100000098 3300005367 Bacteria 108706
40 Ga0070667_100008204 3300005367 Bacteria 8659
41 Ga0070705_100055875 3300005440 Bacteria 2322
42 Ga0070708_100145087 3300005445 Bacteria 2204
43 Ga0070663_100010847 3300005455 Bacteria 5693
44 Ga0070679_100130711 3300005530 Bacteria 2492
45 Ga0070684_100184741 3300005535 Bacteria 1896
46 Ga0070665_100005897 3300005548 Bacteria 12552
47 Ga0068855_100082148 3300005563 Bacteria 3735
48 Ga0068855_100122869 3300005563 Bacteria 2970
49 Ga0068857_100143386 3300005577 Bacteria 2160
50 Ga0068857_100148090 3300005577 Bacteria 2125
51 Ga0068854_100006158 3300005578 Bacteria 7615
52 Ga0068854_100076203 3300005578 Bacteria 2464
53 Ga0068856_100025029 3300005614 Bacteria 5818
54 Ga0068856_100030426 3300005614 Bacteria 5277
55 Ga0068856_100268591 3300005614 Bacteria 1721
56 Ga0068852_100000582 3300005616 Bacteria 24092
57 Ga0068859_100002706 3300005617 Bacteria 17985
58 Ga0068859_100019900 3300005617 Bacteria 6737
59 Ga0068859_100032031 3300005617 Bacteria 5281
60 Ga0068859_100309365 3300005617 Bacteria 1674
61 Ga0068864_100000767 3300005618 Bacteria 26986
62 Ga0068864_100003415 3300005618 Bacteria 13135
63 Ga0068864_100010911 3300005618 Bacteria 7512
64 Ga0068864_100206248 3300005618 Bacteria 1808
65 Ga0068861_100000148 3300005719 Bacteria 36127
66 Ga0068861_100001005 3300005719 Bacteria 17210
67 Ga0068861_100057469 3300005719 Bacteria 2972
68 Ga0068851_10030384 3300005834 Bacteria 2679
69 Ga0068863_100000054 3300005841 Bacteria 124495
70 Ga0068863_100009707 3300005841 Bacteria 9389
71 Ga0068863_100015872 3300005841 Bacteria 7224
72 Ga0068863_100017375 3300005841 Bacteria 6897
73 Ga0068858_100000588 3300005842 Bacteria 38216
74 Ga0068858_100008633 3300005842 Bacteria 9786
75 Ga0068860_100000045 3300005843 Bacteria 223252
76 Ga0068860_100000164 3300005843 Bacteria 108706
77 Ga0068860_100004315 3300005843 Bacteria 14542
78 Ga0068860_100018339 3300005843 Bacteria 6809
79 Ga0068862_100000001 3300005844 Bacteria 523031
80 Ga0068862_100000449 3300005844 Bacteria 44685
81 Ga0068862_100007780 3300005844 Bacteria 8862
82 Ga0068862_100295744 3300005844 Bacteria 1488
83 Ga0070717_10040030 3300006028 Bacteria 3816
84 Ga0075368_10001434 3300006042 Bacteria 7630
85 Ga0075363_100080036 3300006048 Bacteria 1786
86 Ga0075367_10000150 3300006178 Bacteria 21514
87 Ga0075430_100090390 3300006846 Bacteria 2561
88 Ga0075431_100040456 3300006847 Bacteria 4805
89 Ga0075429_100012017 3300006880 Bacteria 7506
90 Ga0097620_100002706 3300006931 Bacteria 17985
91 Ga0097620_100019900 3300006931 Bacteria 6737
92 Ga0097620_100032030 3300006931 Bacteria 5281
93 Ga0097620_100309353 3300006931 Bacteria 1674
94 Ga0105251_10028615 3300009011 Bacteria 2813
95 Ga0105245_10000081 3300009098 Bacteria 96155
96 Ga0105247_10011086 3300009101 Bacteria 5437
97 Ga0105248_10003130 3300009177 Bacteria 18311
98 Ga0105248_10057005 3300009177 Bacteria 4384
99 Ga0105237_10025779 3300009545 Bacteria 6012
100 Ga0105237_10327119 3300009545 Bacteria 1537
101 Ga0105238_10202323 3300009551 Bacteria 1962
102 Ga0105249_10006586 3300009553 Bacteria 10107
103 Ga0105249_10187344 3300009553 Bacteria 2017
104 Ga0105148_100037 3300009978 Bacteria 19472
105 Ga0105239_10225831 3300010375 Bacteria 2101
106 Ga0157374_10014444 3300013296 Bacteria 6911
107 Ga0157378_10065335 3300013297 Bacteria 3256
108 Ga0163162_10003776 3300013306 Bacteria 14517
109 Ga0163163_10022744 3300014325 Bacteria 5940
110 Ga0157380_10000117 3300014326 Bacteria 43820
111 Ga0157379_10011635 3300014968 Bacteria 7683
112 Ga0157376_10058195 3300014969 Bacteria 3236
113 Ga0163161_10151314 3300017792 Bacteria 1764
114 Ga0163161_10182468 3300017792 Bacteria 1610
115 Ga0213876_10033967 3300021384 Bacteria 2689
116 Ga0209147_101877 3300025229 Bacteria 6405
117 Ga0207697_10002057 3300025315 Bacteria 10594
118 Ga0207656_10002860 3300025321 Bacteria 5879
119 Ga0207710_10002965 3300025900 Bacteria 7682
120 Ga0207680_10000336 3300025903 Bacteria 22431
121 Ga0207680_10007736 3300025903 Bacteria 5253
122 Ga0207680_10063410 3300025903 Bacteria 2262
123 Ga0207680_10100457 3300025903 Bacteria 1858
124 Ga0207647_10006385 3300025904 Bacteria 8573
125 Ga0207705_10000004 3300025909 Bacteria 705756
126 Ga0207654_10022694 3300025911 Bacteria 3352
127 Ga0207657_10014805 3300025919 Bacteria 7593
128 Ga0207681_10000002 3300025923 Bacteria 985597
129 Ga0207681_10000005 3300025923 Bacteria 555724
130 Ga0207681_10013583 3300025923 Bacteria 5043
131 Ga0207681_10091130 3300025923 Bacteria 2177
132 Ga0207694_10003983 3300025924 Bacteria 11645
133 Ga0207694_10005568 3300025924 Bacteria 9648
134 Ga0207650_10000004 3300025925 Bacteria 743372
135 Ga0207650_10002404 3300025925 Bacteria 13042
136 Ga0207650_10011490 3300025925 Bacteria 6095
137 Ga0207650_10034910 3300025925 Bacteria 3649
138 Ga0207687_10001036 3300025927 Bacteria 18879
139 Ga0207644_10000002 3300025931 Bacteria 942221
140 Ga0207644_10000078 3300025931 Bacteria 72212
141 Ga0207644_10043872 3300025931 Bacteria 3175
142 Ga0207690_10117764 3300025932 Bacteria 1924
143 Ga0207670_10037351 3300025936 Bacteria 3165
144 Ga0207711_10004029 3300025941 Bacteria 12608
145 Ga0207689_10119584 3300025942 Bacteria 2167
146 Ga0207667_10114865 3300025949 Bacteria 2775
147 Ga0207712_10057676 3300025961 Bacteria 2741
148 Ga0207668_10000480 3300025972 Bacteria 24978
149 Ga0207668_10000924 3300025972 Bacteria 17639
150 Ga0207668_10001038 3300025972 Bacteria 16583
151 Ga0207668_10030180 3300025972 Bacteria 3561
152 Ga0207640_10024905 3300025981 Bacteria 3616
153 Ga0207640_10040985 3300025981 Bacteria 2942
154 Ga0207658_10000002 3300025986 Bacteria 1364188
155 Ga0207658_10000039 3300025986 Bacteria 143707
156 Ga0207658_10000196 3300025986 Bacteria 63933
157 Ga0207658_10008924 3300025986 Bacteria 6799
158 Ga0207703_10000587 3300026035 Bacteria 37079
159 Ga0207639_10000387 3300026041 Bacteria 30349
160 Ga0207639_10003181 3300026041 Bacteria 11040
161 Ga0207678_10001685 3300026067 Bacteria 20296
162 Ga0207702_10017997 3300026078 Bacteria 5849
163 Ga0207702_10299685 3300026078 Bacteria 1525
164 Ga0207641_10000095 3300026088 Bacteria 124498
165 Ga0207641_10000583 3300026088 Bacteria 40220
166 Ga0207641_10005235 3300026088 Bacteria 11094
167 Ga0207641_10007060 3300026088 Bacteria 9381
168 Ga0207641_10009799 3300026088 Bacteria 7888
169 Ga0207641_10018698 3300026088 Bacteria 5680
170 Ga0207676_10000006 3300026095 Bacteria 681936
171 Ga0207676_10008084 3300026095 Bacteria 7476
172 Ga0207676_10115520 3300026095 Bacteria 2254
173 Ga0207674_10020967 3300026116 Bacteria 7049
174 Ga0207674_10280785 3300026116 Bacteria 1613
175 Ga0207675_100000355 3300026118 Bacteria 43840
176 Ga0207675_100003637 3300026118 Bacteria 15029
177 Ga0207675_100134694 3300026118 Bacteria 2343
178 Ga0207683_10005310 3300026121 Bacteria 11047
179 Ga0207698_10000053 3300026142 Bacteria 82772
180 Ga0207698_10082846 3300026142 Bacteria 2594
181 Ga0209813_10000005 3300027866 Bacteria 128895
182 Ga0268266_10012567 3300028379 Bacteria 7316
183 Ga0268265_10000001 3300028380 Bacteria 1230727
184 Ga0268265_10000361 3300028380 Bacteria 49182
185 Ga0268265_10000684 3300028380 Bacteria 33416
186 Ga0268264_10000101 3300028381 Bacteria 225109
187 Ga0268264_10000116 3300028381 Bacteria 198591
188 Ga0268264_10000228 3300028381 Bacteria 108722
189 Ga0268264_10006874 3300028381 Bacteria 9548
190 Ga0307515_10076491 3300028794 Bacteria 4439
191 Ga0265338_10144694 3300028800 Bacteria 1856
192 Ga0265332_10003457 3300031238 Bacteria 7611
193 Ga0307513_10053419 3300031456 Bacteria 4343
194 Ga0307509_10000576 3300031507 Bacteria 62888
195 Ga0307509_10003565 3300031507 Bacteria 23428
196 Ga0307509_10028838 3300031507 Bacteria 6168
197 Ga0307516_10040374 3300031730 Bacteria 4646
198 Ga0307412_10000374 3300031911 Bacteria 27876
199 Ga0307412_10172476 3300031911 Bacteria 1618
200 Ga0307414_10000144 3300032004 Bacteria 48442
201 Ga0307414_10133965 3300032004 Bacteria 1928
202 Ga0373949_0000037 3300035090 Bacteria 47703
203 Ga0373936_0000016 3300035113 Bacteria 198547
204 Ga0373941_0007895 3300035115 Bacteria 2623
205 Ga0373961_0000110 3300035241 Bacteria 42581
206 Ga0395899_0006237 3300037312 Bacteria 9235
207 Ga0395900_0031794 3300037418 Bacteria 5424
208 Ga0237816_00139 3300039145 Bacteria 5671
209 Ga0436365_1383286 3300039437 Bacteria 2948
210 Ga0495627_000089 3300046453 Bacteria 110113
211 Ga0495627_000108 3300046453 Bacteria 102455
212 Ga0495638_0073580 3300046460 Bacteria 2085
213 Ga0495650_0002647 3300046471 Bacteria 13986
214 Ga0495610_0000615 3300046512 Bacteria 35218
215 Ga0495616_0000687 3300046513 Bacteria 25047
216 Ga0495632_0000001 3300046519 Bacteria 873295
217 Ga0495637_0000883 3300046520 Bacteria 19416
218 Ga0495643_0000006 3300046522 Bacteria 419524
219 Ga0495643_0112897 3300046522 Bacteria 1380
220 Ga0495663_0000002 3300046525 Bacteria 495384
221 Ga0495633_0000160 3300046558 Bacteria 88116
222 Ga0495633_0000276 3300046558 Bacteria 59784
223 Ga0495633_0038093 3300046558 Bacteria 2298
224 Ga0495633_0103163 3300046558 Bacteria 1323
225 Ga0495668_0005097 3300046616 Bacteria 9032
226 Ga0495671_0000008 3300046692 Bacteria 419524
227 Ga0495681_0000103 3300047470 Bacteria 75088
228 Ga0495681_0005494 3300047470 Bacteria 8475
229 Ga0495686_0041718 3300047472 Bacteria 2921
230 Ga0496108_0065057 3300048911 Bacteria 3073
231 Ga0496110_0217296 3300048913 Bacteria 1738
232 Ga0496113_0307639 3300048916 Bacteria 1269
233 Ga0496121_0066723 3300048924 Bacteria 2920
234 Ga0496122_0080342 3300048925 Bacteria 2274
235 Ga0496122_0134164 3300048925 Bacteria 1565
236 Ga0496123_0006776 3300048926 Bacteria 11011
237 Ga0496124_0014971 3300048927 Bacteria 7467
238 Ga0496125_0026793 3300048928 Bacteria 5238
239 Ga0496125_0089454 3300048928 Bacteria 2316
240 Ga0496125_0164036 3300048928 Bacteria 1504
241 Ga0501314_006011 3300049530 Bacteria 1047
242 Ga0501032_0008650 3300049569 Bacteria 7420
243 Ga0501034_0138354 3300049571 Bacteria 2415
244 Ga0501038_0158918 3300049574 Bacteria 1838
245 Ga0501043_0048797 3300049579 Bacteria 3327
246 Ga0501047_0001284 3300049581 Bacteria 24820
247 Ga0501070_0029455 3300049586 Bacteria 4602
248 Ga0501070_0045889 3300049586 Bacteria 3633
249 Ga0501223_000022 3300049663 Bacteria 65110
250 Ga0501223_000070 3300049663 Bacteria 31069
251 Ga0501224_000012 3300049664 Bacteria 92585
252 Ga0501249_000546 3300049679 Bacteria 9061
253 Ga0501225_0000019 3300049705 Bacteria 59374
254 Ga0501225_0000151 3300049705 Bacteria 21256
255 Ga0501225_0000872 3300049705 Bacteria 9370
256 Ga0501234_000414 3300049707 Bacteria 6343
257 Ga0501080_0157056 3300049742 Bacteria 2101
258 Ga0501226_000064 3300049853 Bacteria 35696
259 nmdc:mga03n38_14762_c1 3300050490 Bacteria 3002
260 nmdc:mga06z11_43_c1 3300050494 Bacteria 52632
261 nmdc:mga04h51_28_c1 3300050495 Bacteria 52617
262 Ga0500578_0070468 3300053086 Bacteria 2229
263 Ga0500643_000081 3300053087 Bacteria 101681
264 Ga0500643_002736 3300053087 Bacteria 8837
265 Ga0500566_0033060 3300053094 Bacteria 3015
266 Ga0500640_009468 3300053095 Bacteria 3893
267 Ga0500554_000713 3300053102 Bacteria 6733
268 Ga0500595_002587 3300053119 Bacteria 8836
269 Ga0500614_001977 3300053123 Bacteria 4689
270 Ga0500618_012317 3300053125 Bacteria 2241
271 Ga0500642_0077254 3300053130 Bacteria 1524
272 Ga0500559_0003782 3300053136 Bacteria 7348
273 Ga0500559_0012942 3300053136 Bacteria 3539
274 Ga0500564_128610 3300053138 Bacteria 1098
275 Ga0500585_037091 3300053144 Bacteria 1706
276 Ga0500603_000621 3300053150 Bacteria 8756
277 Ga0500624_000057 3300053157 Bacteria 71174
278 Ga0500624_000065 3300053157 Bacteria 63944
279 Ga0500627_0024822 3300053158 Bacteria 2457
280 Ga0500636_0029162 3300053177 Bacteria 3258

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300005618 Ga0068864_100206248 Ga0068864_1002062482 282
2 3300025927 Ga0207687_10001036 Ga0207687_1000103617 282
3 3300026095 Ga0207676_10115520 Ga0207676_101155201 282
4 3300053138 Ga0500564_128610 Ga0500564_128610_177_1073 284
5 3300005365 Ga0070688_100170938 Ga0070688_1001709382 291
6 3300005330 Ga0070690_100014251 Ga0070690_1000142512 292
7 3300048924 Ga0496121_0066723 Ga0496121_0066723_2026_2904 292
8 3300005334 Ga0068869_100133256 Ga0068869_1001332561 294
9 3300005535 Ga0070684_100184741 Ga0070684_1001847411 294
10 3300025942 Ga0207689_10119584 Ga0207689_101195842 294
11 3300005445 Ga0070708_100145087 Ga0070708_1001450872 297
12 3300009098 Ga0105245_10000081 Ga0105245_1000008176 298
13 3300014969 Ga0157376_10058195 Ga0157376_100581952 298
14 3300025936 Ga0207670_10037351 Ga0207670_100373512 299
15 3300005548 Ga0070665_100005897 Ga0070665_10000589711 300
16 3300028379 Ga0268266_10012567 Ga0268266_100125672 300
17 3300013296 Ga0157374_10014444 Ga0157374_100144442 302
18 3300021384 Ga0213876_10033967 Ga0213876_100339672 302
19 3300026121 Ga0207683_10005310 Ga0207683_100053102 302
20 3300037312 Ga0395899_0006237 Ga0395899_0006237_3935_4864 302
21 3300037418 Ga0395900_0031794 Ga0395900_0031794_2330_3259 302
22 3300039437 Ga0436365_1383286 Ga0436365_1383286_1629_2558 302
23 3300005530 Ga0070679_100130711 Ga0070679_1001307111 303
24 3300005614 Ga0068856_100268591 Ga0068856_1002685912 303
25 3300009545 Ga0105237_10327119 Ga0105237_103271192 303
26 3300026078 Ga0207702_10299685 Ga0207702_102996852 303
27 3300028800 Ga0265338_10144694 Ga0265338_101446942 303
28 iso_pu_bacteria 2643221541 2643731310 303
29 iso_pu_bacteria 2643221606 2644042362 303
30 iso_pu_bacteria 2643221671 2644393996 303
31 3300005289 Ga0065704_10004641 Ga0065704_100046414 307
32 3300005295 Ga0065707_10153332 Ga0065707_101533321 307
33 3300005331 Ga0070670_100104092 Ga0070670_1001040922 307
34 3300005335 Ga0070666_10005988 Ga0070666_100059884 307
35 3300005347 Ga0070668_100001336 Ga0070668_10000133611 307
36 3300005366 Ga0070659_100072880 Ga0070659_1000728803 307
37 3300005367 Ga0070667_100000062 Ga0070667_100000062122 307
38 3300005618 Ga0068864_100000767 Ga0068864_10000076723 307
39 3300005841 Ga0068863_100000054 Ga0068863_100000054109 307
40 3300005841 Ga0068863_100009707 Ga0068863_10000970711 307
41 3300005843 Ga0068860_100018339 Ga0068860_1000183399 307
42 3300006042 Ga0075368_10001434 Ga0075368_100014344 307
43 3300006048 Ga0075363_100080036 Ga0075363_1000800364 307
44 3300006178 Ga0075367_10000150 Ga0075367_100001504 307
45 3300025903 Ga0207680_10007736 Ga0207680_100077362 307
46 3300025923 Ga0207681_10091130 Ga0207681_100911302 307
47 3300025925 Ga0207650_10034910 Ga0207650_100349102 307
48 3300025972 Ga0207668_10000924 Ga0207668_1000092410 307
49 3300025986 Ga0207658_10000039 Ga0207658_100000399 307
50 3300026088 Ga0207641_10000095 Ga0207641_1000009511 307
51 3300026088 Ga0207641_10000583 Ga0207641_1000058322 307
52 3300027866 Ga0209813_10000005 Ga0209813_1000000593 307
53 3300028381 Ga0268264_10006874 Ga0268264_100068742 307
54 3300031507 Ga0307509_10003565 Ga0307509_1000356513 307
55 3300031911 Ga0307412_10000374 Ga0307412_1000037411 307
56 3300032004 Ga0307414_10000144 Ga0307414_100001443 307
57 3300046471 Ga0495650_0002647 Ga0495650_0002647_6448_7371 307
58 3300048928 Ga0496125_0089454 Ga0496125_0089454_1031_1954 307
59 3300049530 Ga0501314_006011 Ga0501314_006011_64_987 307
60 3300049663 Ga0501223_000070 Ga0501223_000070_5139_6062 307
61 3300049664 Ga0501224_000012 Ga0501224_000012_53323_54246 307
62 3300049705 Ga0501225_0000019 Ga0501225_0000019_53267_54190 307
63 3300049707 Ga0501234_000414 Ga0501234_000414_1954_2877 307
64 3300049853 Ga0501226_000064 Ga0501226_000064_20171_21094 307
65 3300046460 Ga0495638_0073580 Ga0495638_0073580_953_2014 308
66 3300005334 Ga0068869_100321082 Ga0068869_1003210822 309
67 3300005617 Ga0068859_100309365 Ga0068859_1003093652 309
68 3300005719 Ga0068861_100057469 Ga0068861_1000574692 309
69 3300005844 Ga0068862_100295744 Ga0068862_1002957442 309
70 3300006931 Ga0097620_100309353 Ga0097620_1003093532 309
71 3300013297 Ga0157378_10065335 Ga0157378_100653353 309
72 3300026118 Ga0207675_100134694 Ga0207675_1001346942 309
73 3300031507 Ga0307509_10000576 Ga0307509_1000057611 309
74 3300053144 Ga0500585_037091 Ga0500585_037091_140_1111 309
75 3300053150 Ga0500603_000621 Ga0500603_000621_1540_2511 309
76 3300049586 Ga0501070_0029455 Ga0501070_0029455_603_1559 310
77 3300049586 Ga0501070_0045889 Ga0501070_0045889_2085_3041 310
78 3300049742 Ga0501080_0157056 Ga0501080_0157056_295_1251 310
79 3300006028 Ga0070717_10040030 Ga0070717_100400303 311
80 3300006846 Ga0075430_100090390 Ga0075430_1000903902 311
81 3300006847 Ga0075431_100040456 Ga0075431_1000404562 311
82 3300006880 Ga0075429_100012017 Ga0075429_1000120175 311
83 3300009553 Ga0105249_10187344 Ga0105249_101873441 311
84 3300031456 Ga0307513_10053419 Ga0307513_100534192 311
85 3300035241 Ga0373961_0000110 Ga0373961_0000110_24863_25834 311
86 3300046522 Ga0495643_0112897 Ga0495643_0112897_80_1075 311
87 3300035115 Ga0373941_0007895 Ga0373941_0007895_254_1234 313
88 3300053094 Ga0500566_0033060 Ga0500566_0033060_439_1413 313
89 3300053095 Ga0500640_009468 Ga0500640_009468_2209_3183 313
90 3300053102 Ga0500554_000713 Ga0500554_000713_434_1408 313
91 3300053119 Ga0500595_002587 Ga0500595_002587_2174_3148 313
92 3300053123 Ga0500614_001977 Ga0500614_001977_1465_2439 313
93 3300053136 Ga0500559_0003782 Ga0500559_0003782_5333_6307 313
94 3300035113 Ga0373936_0000016 Ga0373936_0000016_14670_15659 315
95 3300053130 Ga0500642_0077254 Ga0500642_0077254_267_1277 316
96 3300028794 Ga0307515_10076491 Ga0307515_100764912 317
97 3300031507 Ga0307509_10028838 Ga0307509_100288382 317
98 3300031730 Ga0307516_10040374 Ga0307516_100403743 317
99 3300005295 Ga0065707_10104580 Ga0065707_101045803 319
100 3300005347 Ga0070668_100019826 Ga0070668_1000198267 319
101 3300005719 Ga0068861_100001005 Ga0068861_10000100512 319
102 3300005844 Ga0068862_100000001 Ga0068862_10000000118 319
103 3300017792 Ga0163161_10182468 Ga0163161_101824682 319
104 3300025972 Ga0207668_10030180 Ga0207668_100301803 319
105 3300026118 Ga0207675_100003637 Ga0207675_1000036372 319
106 3300028380 Ga0268265_10000001 Ga0268265_100000011012 319
107 3300002076 JGI24749J21850_1000227 JGI24749J21850_10002273 320
108 3300002459 JGI24751J29686_10000366 JGI24751J29686_1000036616 320
109 3300005331 Ga0070670_100003440 Ga0070670_1000034403 320
110 3300005353 Ga0070669_100000049 Ga0070669_100000049114 320
111 3300005617 Ga0068859_100032031 Ga0068859_1000320311 320
112 3300005618 Ga0068864_100003415 Ga0068864_1000034153 320
113 3300006931 Ga0097620_100032030 Ga0097620_1000320301 320
114 3300009177 Ga0105248_10003130 Ga0105248_1000313020 320
115 3300014325 Ga0163163_10022744 Ga0163163_100227441 320
116 3300014326 Ga0157380_10000117 Ga0157380_1000011726 320
117 3300025903 Ga0207680_10063410 Ga0207680_100634102 320
118 3300025923 Ga0207681_10000005 Ga0207681_10000005173 320
119 3300025925 Ga0207650_10000004 Ga0207650_10000004548 320
120 3300025941 Ga0207711_10004029 Ga0207711_1000402915 320
121 3300026095 Ga0207676_10000006 Ga0207676_10000006164 320
122 3300035090 Ga0373949_0000037 Ga0373949_0000037_196_1299 320
123 3300053086 Ga0500578_0070468 Ga0500578_0070468_664_1743 320
124 3300031238 Ga0265332_10003457 Ga0265332_100034574 326
125 iso_pu_bacteria 2775507255 2778124483 328
126 iso_pu_bacteria 2808606404 2809077761 328
127 iso_pu_bacteria 2808606405 2809082531 328
128 iso_pu_bacteria 2880518877 2880520020 328
129 iso_pu_bacteria 2919709256 2919711511 328
130 3300049679 Ga0501249_000546 Ga0501249_000546_6474_7466 330
131 2162886007 SwRhRL2b_contig_3789888 SwRhRL2b_0475.00002940 332
132 3300001904 JGI24736J21556_1000868 JGI24736J21556_10008685 332
133 3300001915 JGI24741J21665_1000154 JGI24741J21665_10001545 332
134 3300001979 JGI24740J21852_10001089 JGI24740J21852_100010898 332
135 3300001989 JGI24739J22299_10000294 JGI24739J22299_1000029414 332
136 3300002067 JGI24735J21928_10002700 JGI24735J21928_100027002 332
137 3300002075 JGI24738J21930_10001697 JGI24738J21930_100016975 332
138 3300005327 Ga0070658_10001688 Ga0070658_100016885 332
139 3300005327 Ga0070658_10272168 Ga0070658_102721682 332
140 3300005331 Ga0070670_100001111 Ga0070670_10000111120 332
141 3300005331 Ga0070670_100006621 Ga0070670_1000066213 332
142 3300005335 Ga0070666_10000063 Ga0070666_1000006354 332
143 3300005335 Ga0070666_10117662 Ga0070666_101176622 332
144 3300005344 Ga0070661_100113228 Ga0070661_1001132281 332
145 3300005347 Ga0070668_100000008 Ga0070668_10000000822 332
146 3300005353 Ga0070669_100000042 Ga0070669_10000004293 332
147 3300005353 Ga0070669_100006880 Ga0070669_1000068804 332
148 3300005353 Ga0070669_100238394 Ga0070669_1002383941 332
149 3300005355 Ga0070671_100000002 Ga0070671_10000000226 332
150 3300005355 Ga0070671_100000064 Ga0070671_10000006488 332
151 3300005367 Ga0070667_100000003 Ga0070667_100000003405 332
152 3300005367 Ga0070667_100000098 Ga0070667_10000009848 332
153 3300005367 Ga0070667_100008204 Ga0070667_1000082047 332
154 3300005440 Ga0070705_100055875 Ga0070705_1000558752 332
155 3300005455 Ga0070663_100010847 Ga0070663_1000108476 332
156 3300005563 Ga0068855_100082148 Ga0068855_1000821483 332
157 3300005563 Ga0068855_100122869 Ga0068855_1001228693 332
158 3300005577 Ga0068857_100143386 Ga0068857_1001433862 332
159 3300005577 Ga0068857_100148090 Ga0068857_1001480902 332
160 3300005578 Ga0068854_100006158 Ga0068854_10000615811 332
161 3300005578 Ga0068854_100076203 Ga0068854_1000762032 332
162 3300005614 Ga0068856_100025029 Ga0068856_1000250296 332
163 3300005614 Ga0068856_100030426 Ga0068856_1000304262 332
164 3300005616 Ga0068852_100000582 Ga0068852_10000058212 332
165 3300005617 Ga0068859_100002706 Ga0068859_10000270610 332
166 3300005617 Ga0068859_100019900 Ga0068859_1000199007 332
167 3300005618 Ga0068864_100010911 Ga0068864_1000109115 332
168 3300005719 Ga0068861_100000148 Ga0068861_10000014823 332
169 3300005834 Ga0068851_10030384 Ga0068851_100303843 332
170 3300005841 Ga0068863_100015872 Ga0068863_1000158727 332
171 3300005841 Ga0068863_100017375 Ga0068863_1000173758 332
172 3300005842 Ga0068858_100000588 Ga0068858_1000005884 332
173 3300005842 Ga0068858_100008633 Ga0068858_10000863310 332
174 3300005843 Ga0068860_100000045 Ga0068860_100000045175 332
175 3300005843 Ga0068860_100000164 Ga0068860_10000016448 332
176 3300005843 Ga0068860_100004315 Ga0068860_1000043158 332
177 3300005844 Ga0068862_100000449 Ga0068862_10000044929 332
178 3300005844 Ga0068862_100007780 Ga0068862_1000077808 332
179 3300006931 Ga0097620_100002706 Ga0097620_1000027068 332
180 3300006931 Ga0097620_100019900 Ga0097620_1000199004 332
181 3300009011 Ga0105251_10028615 Ga0105251_100286153 332
182 3300009101 Ga0105247_10011086 Ga0105247_100110862 332
183 3300009177 Ga0105248_10057005 Ga0105248_100570055 332
184 3300009545 Ga0105237_10025779 Ga0105237_100257792 332
185 3300009551 Ga0105238_10202323 Ga0105238_102023232 332
186 3300009553 Ga0105249_10006586 Ga0105249_100065865 332
187 3300009978 Ga0105148_100037 Ga0105148_10003718 332
188 3300010375 Ga0105239_10225831 Ga0105239_102258312 332
189 3300013306 Ga0163162_10003776 Ga0163162_1000377610 332
190 3300014968 Ga0157379_10011635 Ga0157379_100116355 332
191 3300017792 Ga0163161_10151314 Ga0163161_101513142 332
192 3300025229 Ga0209147_101877 Ga0209147_1018774 332
193 3300025315 Ga0207697_10002057 Ga0207697_100020579 332
194 3300025321 Ga0207656_10002860 Ga0207656_100028602 332
195 3300025900 Ga0207710_10002965 Ga0207710_100029657 332
196 3300025903 Ga0207680_10000336 Ga0207680_1000033617 332
197 3300025903 Ga0207680_10100457 Ga0207680_101004572 332
198 3300025904 Ga0207647_10006385 Ga0207647_100063855 332
199 3300025909 Ga0207705_10000004 Ga0207705_10000004669 332
200 3300025911 Ga0207654_10022694 Ga0207654_100226943 332
201 3300025919 Ga0207657_10014805 Ga0207657_100148056 332
202 3300025923 Ga0207681_10000002 Ga0207681_10000002412 332
203 3300025923 Ga0207681_10013583 Ga0207681_100135834 332
204 3300025924 Ga0207694_10003983 Ga0207694_100039833 332
205 3300025924 Ga0207694_10005568 Ga0207694_100055686 332
206 3300025925 Ga0207650_10002404 Ga0207650_100024047 332
207 3300025925 Ga0207650_10011490 Ga0207650_100114904 332
208 3300025931 Ga0207644_10000002 Ga0207644_10000002417 332
209 3300025931 Ga0207644_10000078 Ga0207644_1000007887 332
210 3300025931 Ga0207644_10043872 Ga0207644_100438723 332
211 3300025932 Ga0207690_10117764 Ga0207690_101177642 332
212 3300025949 Ga0207667_10114865 Ga0207667_101148652 332
213 3300025961 Ga0207712_10057676 Ga0207712_100576763 332
214 3300025972 Ga0207668_10000480 Ga0207668_1000048028 332
215 3300025972 Ga0207668_10001038 Ga0207668_1000103812 332
216 3300025981 Ga0207640_10024905 Ga0207640_100249052 332
217 3300025981 Ga0207640_10040985 Ga0207640_100409854 332
218 3300025986 Ga0207658_10000002 Ga0207658_100000021307 332
219 3300025986 Ga0207658_10000196 Ga0207658_1000019647 332
220 3300025986 Ga0207658_10008924 Ga0207658_100089245 332
221 3300026035 Ga0207703_10000587 Ga0207703_1000058737 332
222 3300026041 Ga0207639_10000387 Ga0207639_100003874 332
223 3300026041 Ga0207639_10003181 Ga0207639_100031813 332
224 3300026067 Ga0207678_10001685 Ga0207678_100016855 332
225 3300026078 Ga0207702_10017997 Ga0207702_100179976 332
226 3300026088 Ga0207641_10005235 Ga0207641_1000523511 332
227 3300026088 Ga0207641_10007060 Ga0207641_100070608 332
228 3300026088 Ga0207641_10009799 Ga0207641_1000979910 332
229 3300026088 Ga0207641_10018698 Ga0207641_100186984 332
230 3300026095 Ga0207676_10008084 Ga0207676_100080846 332
231 3300026116 Ga0207674_10020967 Ga0207674_100209677 332
232 3300026116 Ga0207674_10280785 Ga0207674_102807852 332
233 3300026118 Ga0207675_100000355 Ga0207675_10000035519 332
234 3300026142 Ga0207698_10000053 Ga0207698_1000005370 332
235 3300026142 Ga0207698_10082846 Ga0207698_100828462 332
236 3300028380 Ga0268265_10000361 Ga0268265_1000036123 332
237 3300028380 Ga0268265_10000684 Ga0268265_1000068413 332
238 3300028381 Ga0268264_10000101 Ga0268264_10000101177 332
239 3300028381 Ga0268264_10000116 Ga0268264_1000011628 332
240 3300028381 Ga0268264_10000228 Ga0268264_1000022867 332
241 3300031911 Ga0307412_10172476 Ga0307412_101724762 332
242 3300032004 Ga0307414_10133965 Ga0307414_101339652 332
243 3300039145 Ga0237816_00139 Ga0237816_00139_1902_2909 332
244 3300046453 Ga0495627_000089 Ga0495627_000089_37531_38529 332
245 3300046453 Ga0495627_000108 Ga0495627_000108_25431_26447 332
246 3300046512 Ga0495610_0000615 Ga0495610_0000615_25778_26794 332
247 3300046513 Ga0495616_0000687 Ga0495616_0000687_21788_22786 332
248 3300046519 Ga0495632_0000001 Ga0495632_0000001_316460_317458 332
249 3300046520 Ga0495637_0000883 Ga0495637_0000883_11821_12819 332
250 3300046522 Ga0495643_0000006 Ga0495643_0000006_6612_7610 332
251 3300046525 Ga0495663_0000002 Ga0495663_0000002_314790_315788 332
252 3300046558 Ga0495633_0000160 Ga0495633_0000160_24361_25359 332
253 3300046558 Ga0495633_0000276 Ga0495633_0000276_15966_16964 332
254 3300046558 Ga0495633_0038093 Ga0495633_0038093_676_1674 332
255 3300046558 Ga0495633_0103163 Ga0495633_0103163_302_1300 332
256 3300046616 Ga0495668_0005097 Ga0495668_0005097_6368_7366 332
257 3300046692 Ga0495671_0000008 Ga0495671_0000008_6612_7610 332
258 3300047470 Ga0495681_0000103 Ga0495681_0000103_24490_25506 332
259 3300047470 Ga0495681_0005494 Ga0495681_0005494_6598_7596 332
260 3300047472 Ga0495686_0041718 Ga0495686_0041718_1479_2495 332
261 3300048911 Ga0496108_0065057 Ga0496108_0065057_589_1587 332
262 3300048913 Ga0496110_0217296 Ga0496110_0217296_156_1154 332
263 3300048916 Ga0496113_0307639 Ga0496113_0307639_157_1155 332
264 3300048925 Ga0496122_0080342 Ga0496122_0080342_1027_2025 332
265 3300048925 Ga0496122_0134164 Ga0496122_0134164_60_1073 332
266 3300048926 Ga0496123_0006776 Ga0496123_0006776_8374_9372 332
267 3300048927 Ga0496124_0014971 Ga0496124_0014971_4383_5381 332
268 3300048928 Ga0496125_0026793 Ga0496125_0026793_573_1571 332
269 3300048928 Ga0496125_0164036 Ga0496125_0164036_478_1476 332
270 3300049569 Ga0501032_0008650 Ga0501032_0008650_5081_6079 332
271 3300049571 Ga0501034_0138354 Ga0501034_0138354_850_1848 332
272 3300049574 Ga0501038_0158918 Ga0501038_0158918_710_1708 332
273 3300049579 Ga0501043_0048797 Ga0501043_0048797_1535_2533 332
274 3300049581 Ga0501047_0001284 Ga0501047_0001284_6726_7724 332
275 3300049663 Ga0501223_000022 Ga0501223_000022_27352_28350 332
276 3300049705 Ga0501225_0000151 Ga0501225_0000151_1463_2461 332
277 3300049705 Ga0501225_0000872 Ga0501225_0000872_6223_7221 332
278 3300050490 nmdc:mga03n38_14762_c1 nmdc:mga03n38_14762_c1_104_1102 332
279 3300050494 nmdc:mga06z11_43_c1 nmdc:mga06z11_43_c1_37127_38125 332
280 3300050495 nmdc:mga04h51_28_c1 nmdc:mga04h51_28_c1_37063_38061 332
281 3300053087 Ga0500643_000081 Ga0500643_000081_73889_74887 332
282 3300053087 Ga0500643_002736 Ga0500643_002736_7583_8623 332
283 3300053125 Ga0500618_012317 Ga0500618_012317_742_1782 332
284 3300053136 Ga0500559_0012942 Ga0500559_0012942_1709_2707 332
285 3300053157 Ga0500624_000057 Ga0500624_000057_16875_17873 332
286 3300053157 Ga0500624_000065 Ga0500624_000065_25849_26889 332
287 3300053158 Ga0500627_0024822 Ga0500627_0024822_510_1508 332
288 3300053177 Ga0500636_0029162 Ga0500636_0029162_2201_3241 332

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00389

2-Hacid_dh

D-isomer specific 2-hydroxyacid dehydrogenase, catalytic domain

29

354

0.99

PF02826

2-Hacid_dh_C

D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain

220

322

0.96

PF02826

2-Hacid_dh_C

D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain

107

197

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
2dbq-assembly1.cif.gz_A crystal structure of glyoxylate reductase (ph0597) from pyrococcus horikoshii ot3, complexed with nadp (i41) 0.9588 9 327
6bii-assembly1.cif.gz_B crystal structure of pyrococcus yayanosii glyoxylate hydroxypyruvate reductase in complex with nadp and malonate (re-refinement of 5aow) 0.9556 9 327
5aov-assembly1.cif.gz_A-2 ternary crystal structure of pyrococcus furiosus glyoxylate hydroxypyruvate reductase in presence of glyoxylate 0.9544 9 327
6rj6-assembly1.cif.gz_B crystal structure of phgdh in complex with bi-4924 0.9526 104 317
7va1-assembly1.cif.gz_B crystal structure of human 3-phosphoglycerate dehydrogenase in complex with gdd-04-35 0.9481 111 301
ID Description Score Start End Superfamily
af_Q2FVW4_141_284_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9862 150 294 3.40.50.720
1gdhB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.982 109 292 3.40.50.720
af_Q2FVW4_100_283_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9816 109 294 3.40.50.720
1gdhB02 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9767 109 292 3.40.50.720
af_Q2FVW4_100_283_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9763 109 294 3.40.50.720
ID Description Score Start End GO Terms
AF-A0A0N0RCG7-F1-model_v4 deleted 0.995 6 332
AF-A0A212K9H0-F1-model_v4 Glyoxylate reductase (EC 1.1.1.26) 0.9929 9 328 GO:0005829
GO:0016618
GO:0030267
GO:0047964
GO:0051287
AF-Q0FD29-F1-model_v4 2-hydroxyacid dehydrogenase (EC 1.1.1.272) 0.9926 11 328 GO:0005829
GO:0016618
GO:0030267
GO:0050578
GO:0051287
AF-A0A2U0UY67-F1-model_v4 deleted 0.9925 1 332
AF-A0A2S6TMS5-F1-model_v4 Glycerate dehydrogenase (EC 1.1.1.29) 0.9918 9 328 GO:0005829
GO:0008465
GO:0030267
GO:0051287

Feature Viewer

pLDDT pTM Quality
93.65 0.88 High
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Predicted Structure (AlphaFold2)

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