F388491

General Info

Members Datasets Scaffolds Average Seq Length
288 194 576 241

Family's Representative Sequence

Representative Sequence 3300005985|Ga0081539_10001013|Ga0081539_100010132
Length 275
Sequence MTDLKQNEGQTHLRHDGRSPLELRTVRMITNFTKYAEGSVLIEFGETKVVCTATVEDRVPPFLKGKGVGWVTAEYAMLPRATETRTQRELGRGGPSGRTHEIQRLIGRSLRSVIDMAALGERTVTVDCDVLQADGGTRTAAITGGFVALAIALNKLLEEGKLERPMLRDFLAAVSVGIVAERVVLDLDYKEDAAAEVDMNIIRTGAGRFVEIQGTAETEAFTRAQLDEMVNAAEIGVDRLIAIQQETIVQALAGKNLRALIDSSSRKINWKEEAL

Samples

Sample ID Description Type Environment
1 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
2 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
3 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
4 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
5 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
10 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
17 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
18 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
19 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
20 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
21 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
22 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
25 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
26 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
27 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
28 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
29 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
30 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
31 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
32 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
33 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
34 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
35 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
36 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
37 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
40 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
45 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
46 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
48 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
53 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
57 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
58 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
61 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
62 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
63 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
64 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
65 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
66 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
67 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
68 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
69 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
102 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
103 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
104 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
105 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
106 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
107 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
108 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
109 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
110 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
111 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
112 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
113 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
114 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
115 3300035112 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_16 Metagenome Rhizosphere
116 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
117 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
118 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
119 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
120 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
121 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
122 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
123 3300038726 Seagrass microbial communities from Seahorse Key, FL, USA - TH0319 Metagenome Unclassified
124 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
125 3300038742 Seagrass microbial communities from Seahorse Key, FL, USA - SH0818 Metagenome Unclassified
126 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
127 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
128 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
129 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
130 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
131 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
132 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
133 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
134 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
135 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
136 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
137 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
138 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
139 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
140 3300046543 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 rhizosphere Metagenome Rhizosphere
141 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
142 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
143 3300046678 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL1_34_5 rhizosphere Metagenome Rhizosphere
144 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
145 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
146 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
147 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
148 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
149 3300047445 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 rhizosphere Metagenome Rhizosphere
150 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
151 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
152 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
153 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
154 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
155 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
156 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
157 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
161 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
162 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
169 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
170 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
171 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
172 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
173 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
174 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
175 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
176 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
178 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
179 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
180 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
181 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
182 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
183 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
184 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
185 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
186 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
187 3300059426 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 11_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
188 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
189 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
190 2643221591 Devosia sp. Root685 Isolate Unclassified
191 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified
192 2929206907 Paenibacillus sp. R-74146 Hybrid assembly Isolate Unclassified
193 2980182181 Paenibacillus cymbidii R196 Isolate Unclassified
194 8055225921 Achromobacter panacis KCTC 42751 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.26
Metatranscriptomes 0
Isolates 1.74

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.69
Nodule 0
Rhizoplane 1.74
Rhizosphere 95.14
Stem 0
Stem Tuber 0
Unclassified 0.69

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0081539_10001013 3300005985 Bacteria 51835
2 Ga0065714_10087173 3300005288 Bacteria 2070
3 Ga0065712_10122951 3300005290 Bacteria 1636
4 Ga0065715_10030266 3300005293 Bacteria 1759
5 Ga0065715_10128298 3300005293 Bacteria 2067
6 Ga0065707_10091686 3300005295 Bacteria 3896
7 Ga0070658_10028470 3300005327 Bacteria 4486
8 Ga0070683_100117442 3300005329 Bacteria 2512
9 Ga0070670_100050143 3300005331 Bacteria 3588
10 Ga0070670_100268061 3300005331 Bacteria 1489
11 Ga0070660_100066857 3300005339 Bacteria 2800
12 Ga0070687_100106311 3300005343 Bacteria 1581
13 Ga0070661_100021728 3300005344 Bacteria 4588
14 Ga0070675_100727512 3300005354 Bacteria 905
15 Ga0070673_100386821 3300005364 Bacteria 1248
16 Ga0070688_100574361 3300005365 Bacteria 860
17 Ga0070659_100058362 3300005366 Bacteria 3045
18 Ga0070714_100019049 3300005435 Bacteria 5585
19 Ga0070711_100346665 3300005439 Bacteria 1193
20 Ga0070705_100164445 3300005440 Bacteria 1487
21 Ga0070705_100551283 3300005440 Bacteria 884
22 Ga0070700_100137612 3300005441 Bacteria 1656
23 Ga0070694_100024013 3300005444 Bacteria 3930
24 Ga0070708_100130268 3300005445 Bacteria 2328
25 Ga0070678_100069844 3300005456 Bacteria 2624
26 Ga0070678_100639621 3300005456 Bacteria 953
27 Ga0070681_10006286 3300005458 Bacteria 11547
28 Ga0070681_10737056 3300005458 Bacteria 902
29 Ga0070685_10005604 3300005466 Bacteria 6370
30 Ga0070685_10272467 3300005466 Bacteria 1130
31 Ga0070706_100116497 3300005467 Bacteria 2489
32 Ga0070706_100462008 3300005467 Bacteria 1181
33 Ga0070706_100571973 3300005467 Bacteria 1051
34 Ga0070707_100042975 3300005468 Bacteria 4327
35 Ga0070698_100029985 3300005471 Bacteria 5644
36 Ga0070698_100096700 3300005471 Bacteria 2929
37 Ga0070698_100321108 3300005471 Bacteria 1479
38 Ga0070697_100054346 3300005536 Bacteria 3255
39 Ga0068853_100004125 3300005539 Bacteria 11200
40 Ga0068853_100004512 3300005539 Bacteria 10800
41 Ga0068853_100370620 3300005539 Bacteria 1336
42 Ga0070672_100089785 3300005543 Bacteria 2476
43 Ga0070672_100142812 3300005543 Bacteria 1976
44 Ga0070686_100311845 3300005544 Bacteria 1170
45 Ga0070695_100146822 3300005545 Unclassified 1642
46 Ga0070665_100156565 3300005548 Bacteria 2280
47 Ga0070704_100097903 3300005549 Bacteria 2203
48 Ga0070704_100321533 3300005549 Bacteria 1297
49 Ga0068855_100023230 3300005563 Bacteria 7427
50 Ga0068855_100029736 3300005563 Bacteria 6533
51 Ga0068855_100302071 3300005563 Bacteria 1772
52 Ga0068854_100054848 3300005578 Bacteria 2868
53 Ga0068852_100022137 3300005616 Bacteria 5092
54 Ga0068852_100054184 3300005616 Bacteria 3456
55 Ga0068859_100015481 3300005617 Bacteria 7663
56 Ga0068859_100206088 3300005617 Bacteria 2051
57 Ga0068851_10010460 3300005834 Bacteria 4334
58 Ga0068870_10180355 3300005840 Bacteria 1267
59 Ga0068863_100096106 3300005841 Bacteria 2812
60 Ga0068858_100021917 3300005842 Bacteria 5967
61 Ga0068862_100498301 3300005844 Bacteria 1156
62 Ga0070717_10065047 3300006028 Bacteria 3030
63 Ga0075367_10319780 3300006178 Bacteria 978
64 Ga0097621_100384613 3300006237 Bacteria 1254
65 Ga0075428_100063405 3300006844 Bacteria 4046
66 Ga0075430_100179810 3300006846 Bacteria 1759
67 Ga0075431_100173283 3300006847 Bacteria 2216
68 Ga0075429_100103230 3300006880 Bacteria 2490
69 Ga0097620_100015482 3300006931 Bacteria 7663
70 Ga0097620_100206094 3300006931 Bacteria 2051
71 Ga0075435_100024089 3300007076 Bacteria 4718
72 Ga0105240_10002504 3300009093 Bacteria 29518
73 Ga0105240_10052059 3300009093 Bacteria 5148
74 Ga0105240_10084844 3300009093 Bacteria 3882
75 Ga0105240_10157847 3300009093 Bacteria 2696
76 Ga0111539_10167916 3300009094 Bacteria 2564
77 Ga0114129_10859314 3300009147 Bacteria 1153
78 Ga0105241_10016356 3300009174 Bacteria 5440
79 Ga0105248_10075742 3300009177 Bacteria 3782
80 Ga0105248_10177044 3300009177 Bacteria 2403
81 Ga0105238_10006254 3300009551 Bacteria 11830
82 Ga0105238_10031078 3300009551 Bacteria 5436
83 Ga0105238_10126792 3300009551 Bacteria 2531
84 Ga0105249_10075737 3300009553 Bacteria 3117
85 Ga0105249_10318153 3300009553 Bacteria 1567
86 Ga0105249_10319361 3300009553 Unclassified 1564
87 Ga0105246_10222061 3300011119 Bacteria 1482
88 Ga0157370_10008824 3300013104 Bacteria 10835
89 Ga0157370_10069184 3300013104 Bacteria 3334
90 Ga0157370_10438876 3300013104 Bacteria 1201
91 Ga0157369_10114182 3300013105 Bacteria 2869
92 Ga0157369_10208623 3300013105 Bacteria 2048
93 Ga0157378_10355866 3300013297 Bacteria 1432
94 Ga0157378_10633594 3300013297 Bacteria 1083
95 Ga0157372_10065721 3300013307 Bacteria 4073
96 Ga0157372_10796929 3300013307 Bacteria 1098
97 Ga0157375_10799759 3300013308 Bacteria 1092
98 Ga0163163_10281079 3300014325 Bacteria 1716
99 Ga0163163_10950699 3300014325 Bacteria 923
100 Ga0157380_10176652 3300014326 Bacteria 1872
101 Ga0157380_10687264 3300014326 Bacteria 1026
102 Ga0157380_10854165 3300014326 Bacteria 932
103 Ga0157376_10000619 3300014969 Bacteria 23003
104 Ga0157376_10303010 3300014969 Bacteria 1513
105 Ga0207656_10012916 3300025321 Bacteria 3181
106 Ga0207705_10033729 3300025909 Bacteria 3657
107 Ga0207705_10110196 3300025909 Bacteria 2034
108 Ga0207705_10514902 3300025909 Bacteria 930
109 Ga0207654_10014005 3300025911 Bacteria 4136
110 Ga0207707_10056569 3300025912 Bacteria 3412
111 Ga0207707_10633673 3300025912 Bacteria 902
112 Ga0207695_10001050 3300025913 Bacteria 48496
113 Ga0207695_10152996 3300025913 Bacteria 2244
114 Ga0207695_10506520 3300025913 Bacteria 1089
115 Ga0207671_10325370 3300025914 Bacteria 1217
116 Ga0207649_10001932 3300025920 Bacteria 11818
117 Ga0207649_10130872 3300025920 Bacteria 1704
118 Ga0207652_10072740 3300025921 Bacteria 2990
119 Ga0207652_10259060 3300025921 Bacteria 1569
120 Ga0207646_10034935 3300025922 Bacteria 4544
121 Ga0207646_10076547 3300025922 Bacteria 2990
122 Ga0207681_10096813 3300025923 Bacteria 2120
123 Ga0207694_10041456 3300025924 Bacteria 3548
124 Ga0207694_10052924 3300025924 Bacteria 3147
125 Ga0207694_10157971 3300025924 Bacteria 1830
126 Ga0207694_10183157 3300025924 Bacteria 1699
127 Ga0207650_10021813 3300025925 Bacteria 4529
128 Ga0207700_10245067 3300025928 Bacteria 1529
129 Ga0207700_10759293 3300025928 Bacteria 867
130 Ga0207664_10035642 3300025929 Bacteria 3840
131 Ga0207691_10066340 3300025940 Bacteria 3265
132 Ga0207691_10150127 3300025940 Bacteria 2049
133 Ga0207691_10163517 3300025940 Bacteria 1951
134 Ga0207711_10403330 3300025941 Bacteria 1271
135 Ga0207667_10001019 3300025949 Bacteria 35713
136 Ga0207667_10002485 3300025949 Bacteria 22977
137 Ga0207667_10004089 3300025949 Bacteria 17920
138 Ga0207667_10158010 3300025949 Bacteria 2332
139 Ga0207651_10454187 3300025960 Bacteria 1100
140 Ga0207712_10221622 3300025961 Bacteria 1512
141 Ga0207712_10542080 3300025961 Bacteria 1000
142 Ga0207668_10004796 3300025972 Bacteria 7961
143 Ga0207640_10001977 3300025981 Bacteria 11053
144 Ga0207658_10025132 3300025986 Bacteria 4169
145 Ga0207639_10001066 3300026041 Bacteria 18621
146 Ga0207639_10004700 3300026041 Bacteria 9193
147 Ga0207639_10296300 3300026041 Bacteria 1428
148 Ga0207678_10573155 3300026067 Bacteria 988
149 Ga0207708_10175276 3300026075 Bacteria 1700
150 Ga0207708_10261181 3300026075 Bacteria 1398
151 Ga0207708_10386536 3300026075 Bacteria 1155
152 Ga0207702_10574294 3300026078 Bacteria 1105
153 Ga0207641_10570957 3300026088 Bacteria 1105
154 Ga0207674_10101282 3300026116 Bacteria 2861
155 Ga0207675_100208669 3300026118 Bacteria 1878
156 Ga0207683_10019446 3300026121 Bacteria 5799
157 Ga0207683_10570205 3300026121 Bacteria 1047
158 Ga0207698_10039759 3300026142 Bacteria 3487
159 Ga0207698_10039895 3300026142 Bacteria 3482
160 Ga0207698_10076927 3300026142 Bacteria 2673
161 Ga0207698_10103867 3300026142 Bacteria 2363
162 Ga0207698_10175214 3300026142 Bacteria 1893
163 Ga0268265_10153934 3300028380 Bacteria 1943
164 Ga0268265_10202518 3300028380 Bacteria 1723
165 Ga0268265_10994763 3300028380 Bacteria 828
166 Ga0265337_1005627 3300028556 Bacteria 4942
167 Ga0265326_10018148 3300028558 Bacteria 2026
168 Ga0265319_1000782 3300028563 Bacteria 20640
169 Ga0265334_10059652 3300028573 Bacteria 1441
170 Ga0265318_10002698 3300028577 Bacteria 9317
171 Ga0265318_10012282 3300028577 Bacteria 3652
172 Ga0265318_10012563 3300028577 Bacteria 3599
173 Ga0265336_10004262 3300028666 Bacteria 5441
174 Ga0265338_10012936 3300028800 Bacteria 9474
175 Ga0265339_10097957 3300031249 Bacteria 1530
176 Ga0265331_10037961 3300031250 Bacteria 2357
177 Ga0265316_10049981 3300031344 Bacteria 3291
178 Ga0307409_100096798 3300031995 Bacteria 2436
179 Ga0307416_100032931 3300032002 Bacteria 3923
180 Ga0307411_10320388 3300032005 Bacteria 1252
181 Ga0373934_0028338 3300035086 Bacteria 2182
182 Ga0373932_0008242 3300035112 Bacteria 2490
183 Ga0373931_0016446 3300035691 Bacteria 3641
184 Ga0373927_0029218 3300035695 Bacteria 3592
185 Ga0373947_0059786 3300035725 Bacteria 2311
186 Ga0373947_0099691 3300035725 Bacteria 1824
187 Ga0373937_0194903 3300036401 Bacteria 1904
188 Ga0316584_0203996 3300036712 Bacteria 1458
189 Ga0373925_0009256 3300037068 Bacteria 7171
190 Ga0395901_0725056 3300038443 Bacteria 989
191 Ga0400490_51163 3300038726 Bacteria 18819
192 Ga0400491_03549 3300038727 Bacteria 2383
193 Ga0400486_18539 3300038742 Bacteria 1144
194 Ga0436361_0180624 3300039447 Bacteria 25739
195 Ga0451577_0304224 3300042876 Bacteria 1445
196 Ga0451577_0356440 3300042876 Bacteria 1327
197 Ga0453683_0000127 3300044673 Bacteria 113365
198 Ga0453683_0009418 3300044673 Bacteria 6517
199 Ga0453683_0038023 3300044673 Bacteria 3026
200 Ga0453684_0000768 3300044712 Bacteria 111227
201 Ga0453684_0844087 3300044712 Bacteria 985
202 Ga0451576_0050796 3300045051 Bacteria 4348
203 Ga0451576_0074487 3300045051 Bacteria 3533
204 Ga0451576_0153284 3300045051 Bacteria 2403
205 Ga0495592_0191371 3300046454 Bacteria 1386
206 Ga0495641_0071604 3300046461 Bacteria 1556
207 Ga0495653_0074592 3300046463 Bacteria 2527
208 Ga0495653_0158611 3300046463 Bacteria 1573
209 Ga0495582_0052547 3300046473 Bacteria 2247
210 Ga0495628_0010050 3300046516 Bacteria 8052
211 Ga0495630_0012772 3300046517 Bacteria 6103
212 Ga0495663_0115450 3300046525 Bacteria 895
213 Ga0495666_0095725 3300046526 Bacteria 1400
214 Ga0495640_0011018 3300046533 Bacteria 6964
215 Ga0495645_0134618 3300046543 Bacteria 1729
216 Ga0495667_0264681 3300046559 Bacteria 1093
217 Ga0495657_0136785 3300046675 Bacteria 1530
218 Ga0495599_0179065 3300046678 Bacteria 1307
219 Ga0495646_0182546 3300046680 Bacteria 1151
220 Ga0495647_0140061 3300046681 Bacteria 1031
221 Ga0495674_0088294 3300047319 Bacteria 2652
222 Ga0495674_0209026 3300047319 Bacteria 1617
223 Ga0495680_0006938 3300047322 Bacteria 10453
224 Ga0495680_0127829 3300047322 Bacteria 1870
225 Ga0495675_0032588 3300047444 Bacteria 3325
226 Ga0495677_0122916 3300047445 Bacteria 991
227 Ga0495684_0340769 3300047471 Bacteria 1067
228 Ga0495686_0000179 3300047472 Bacteria 121257
229 Ga0496104_0384834 3300048907 Bacteria 1315
230 Ga0496109_0057539 3300048912 Bacteria 3549
231 Ga0496110_0278481 3300048913 Bacteria 1523
232 Ga0496112_0164573 3300048915 Bacteria 2184
233 Ga0496113_0035937 3300048916 Bacteria 3627
234 Ga0501031_0078182 3300049568 Bacteria 2155
235 Ga0501033_0009069 3300049570 Bacteria 7674
236 Ga0501034_0196019 3300049571 Bacteria 1979
237 Ga0501036_0059543 3300049572 Bacteria 3235
238 Ga0501037_0054209 3300049573 Bacteria 2932
239 Ga0501038_0190898 3300049574 Bacteria 1648
240 Ga0501038_0299302 3300049574 Bacteria 1263
241 Ga0501039_0031863 3300049575 Bacteria 4064
242 Ga0501039_0038944 3300049575 Bacteria 3671
243 Ga0501039_0112399 3300049575 Bacteria 2130
244 Ga0501040_0006028 3300049576 Bacteria 7847
245 Ga0501040_0061140 3300049576 Bacteria 2590
246 Ga0501041_0022367 3300049577 Bacteria 3784
247 Ga0501042_0014520 3300049578 Bacteria 5378
248 Ga0501047_0151107 3300049581 Bacteria 2198
249 Ga0501070_0023669 3300049586 Bacteria 5146
250 Ga0501072_0050273 3300049588 Bacteria 3282
251 Ga0501075_0001832 3300049591 Bacteria 14021
252 Ga0501076_0000428 3300049592 Bacteria 26513
253 Ga0501076_0043325 3300049592 Bacteria 3545
254 Ga0501076_0443680 3300049592 Bacteria 1068
255 Ga0501077_0004606 3300049593 Bacteria 8371
256 Ga0501077_0086652 3300049593 Bacteria 1985
257 Ga0501079_0026239 3300049741 Bacteria 4466
258 Ga0501079_0030510 3300049741 Bacteria 4142
259 Ga0501080_0083540 3300049742 Bacteria 2967
260 Ga0501081_0042706 3300049743 Bacteria 3107
261 Ga0501081_0078242 3300049743 Bacteria 2311
262 Ga0501081_0206861 3300049743 Bacteria 1424
263 Ga0501081_0427267 3300049743 Bacteria 983
264 Ga0501044_0051149 3300049823 Bacteria 4260
265 Ga0501045_0002128 3300049824 Bacteria 13401
266 Ga0501045_0284913 3300049824 Bacteria 1230
267 nmdc:mga05p37_311175_c1 3300050507 Bacteria 1867
268 nmdc:mga06r32_97114_c1 3300050510 Bacteria 2886
269 nmdc:mga08y16_144890_c1 3300050511 Bacteria 2469
270 nmdc:mga0rr50_20306_c1 3300050513 Bacteria 4507
271 Ga0495601_0070946 3300053077 Bacteria 2224
272 Ga0495601_0076912 3300053077 Bacteria 2137
273 Ga0495619_0047917 3300053085 Bacteria 2815
274 Ga0495619_0051257 3300053085 Bacteria 2727
275 Ga0500593_000179 3300053117 Bacteria 25713
276 Ga0501084_0002710 3300054114 Bacteria 14267
277 Ga0501084_0033283 3300054114 Bacteria 4312
278 Ga0501084_0118584 3300054114 Bacteria 2225
279 Ga0590071_009026 3300059421 Bacteria 2344
280 Ga0590077_001596 3300059426 Bacteria 5213
281 Ga0501082_0003258 3300060353 Bacteria 14169
282 Ga0530510_0005344 3300061734 Bacteria 8882
283 Ga0530510_0464463 3300061734 Bacteria 958
284 2643966651 2643221591 Bacteria 4397626
285 2881413597 2881412998 Bacteria 6492157
286 2929210980 2929206907 Bacteria 5918291
287 2980182646 2980182181 Bacteria 9454109
288 8055228180 8055225921 Bacteria 3341787
289 Ga0081539_10001013
290 Ga0065714_10087173
291 Ga0065712_10122951
292 Ga0065715_10030266
293 Ga0065715_10128298
294 Ga0065707_10091686
295 Ga0070658_10028470
296 Ga0070683_100117442
297 Ga0070670_100050143
298 Ga0070670_100268061
299 Ga0070660_100066857
300 Ga0070687_100106311
301 Ga0070661_100021728
302 Ga0070675_100727512
303 Ga0070673_100386821
304 Ga0070688_100574361
305 Ga0070659_100058362
306 Ga0070714_100019049
307 Ga0070711_100346665
308 Ga0070705_100164445
309 Ga0070705_100551283
310 Ga0070700_100137612
311 Ga0070694_100024013
312 Ga0070708_100130268
313 Ga0070678_100069844
314 Ga0070678_100639621
315 Ga0070681_10006286
316 Ga0070681_10737056
317 Ga0070685_10005604
318 Ga0070685_10272467
319 Ga0070706_100116497
320 Ga0070706_100462008
321 Ga0070706_100571973
322 Ga0070707_100042975
323 Ga0070698_100029985
324 Ga0070698_100096700
325 Ga0070698_100321108
326 Ga0070697_100054346
327 Ga0068853_100004125
328 Ga0068853_100004512
329 Ga0068853_100370620
330 Ga0070672_100089785
331 Ga0070672_100142812
332 Ga0070686_100311845
333 Ga0070695_100146822
334 Ga0070665_100156565
335 Ga0070704_100097903
336 Ga0070704_100321533
337 Ga0068855_100023230
338 Ga0068855_100029736
339 Ga0068855_100302071
340 Ga0068854_100054848
341 Ga0068852_100022137
342 Ga0068852_100054184
343 Ga0068859_100015481
344 Ga0068859_100206088
345 Ga0068851_10010460
346 Ga0068870_10180355
347 Ga0068863_100096106
348 Ga0068858_100021917
349 Ga0068862_100498301
350 Ga0070717_10065047
351 Ga0075367_10319780
352 Ga0097621_100384613
353 Ga0075428_100063405
354 Ga0075430_100179810
355 Ga0075431_100173283
356 Ga0075429_100103230
357 Ga0097620_100015482
358 Ga0097620_100206094
359 Ga0075435_100024089
360 Ga0105240_10002504
361 Ga0105240_10052059
362 Ga0105240_10084844
363 Ga0105240_10157847
364 Ga0111539_10167916
365 Ga0114129_10859314
366 Ga0105241_10016356
367 Ga0105248_10075742
368 Ga0105248_10177044
369 Ga0105238_10006254
370 Ga0105238_10031078
371 Ga0105238_10126792
372 Ga0105249_10075737
373 Ga0105249_10318153
374 Ga0105249_10319361
375 Ga0105246_10222061
376 Ga0157370_10008824
377 Ga0157370_10069184
378 Ga0157370_10438876
379 Ga0157369_10114182
380 Ga0157369_10208623
381 Ga0157378_10355866
382 Ga0157378_10633594
383 Ga0157372_10065721
384 Ga0157372_10796929
385 Ga0157375_10799759
386 Ga0163163_10281079
387 Ga0163163_10950699
388 Ga0157380_10176652
389 Ga0157380_10687264
390 Ga0157380_10854165
391 Ga0157376_10000619
392 Ga0157376_10303010
393 Ga0207656_10012916
394 Ga0207705_10033729
395 Ga0207705_10110196
396 Ga0207705_10514902
397 Ga0207654_10014005
398 Ga0207707_10056569
399 Ga0207707_10633673
400 Ga0207695_10001050
401 Ga0207695_10152996
402 Ga0207695_10506520
403 Ga0207671_10325370
404 Ga0207649_10001932
405 Ga0207649_10130872
406 Ga0207652_10072740
407 Ga0207652_10259060
408 Ga0207646_10034935
409 Ga0207646_10076547
410 Ga0207681_10096813
411 Ga0207694_10041456
412 Ga0207694_10052924
413 Ga0207694_10157971
414 Ga0207694_10183157
415 Ga0207650_10021813
416 Ga0207700_10245067
417 Ga0207700_10759293
418 Ga0207664_10035642
419 Ga0207691_10066340
420 Ga0207691_10150127
421 Ga0207691_10163517
422 Ga0207711_10403330
423 Ga0207667_10001019
424 Ga0207667_10002485
425 Ga0207667_10004089
426 Ga0207667_10158010
427 Ga0207651_10454187
428 Ga0207712_10221622
429 Ga0207712_10542080
430 Ga0207668_10004796
431 Ga0207640_10001977
432 Ga0207658_10025132
433 Ga0207639_10001066
434 Ga0207639_10004700
435 Ga0207639_10296300
436 Ga0207678_10573155
437 Ga0207708_10175276
438 Ga0207708_10261181
439 Ga0207708_10386536
440 Ga0207702_10574294
441 Ga0207641_10570957
442 Ga0207674_10101282
443 Ga0207675_100208669
444 Ga0207683_10019446
445 Ga0207683_10570205
446 Ga0207698_10039759
447 Ga0207698_10039895
448 Ga0207698_10076927
449 Ga0207698_10103867
450 Ga0207698_10175214
451 Ga0268265_10153934
452 Ga0268265_10202518
453 Ga0268265_10994763
454 Ga0265337_1005627
455 Ga0265326_10018148
456 Ga0265319_1000782
457 Ga0265334_10059652
458 Ga0265318_10002698
459 Ga0265318_10012282
460 Ga0265318_10012563
461 Ga0265336_10004262
462 Ga0265338_10012936
463 Ga0265339_10097957
464 Ga0265331_10037961
465 Ga0265316_10049981
466 Ga0307409_100096798
467 Ga0307416_100032931
468 Ga0307411_10320388
469 Ga0373934_0028338
470 Ga0373932_0008242
471 Ga0373931_0016446
472 Ga0373927_0029218
473 Ga0373947_0059786
474 Ga0373947_0099691
475 Ga0373937_0194903
476 Ga0316584_0203996
477 Ga0373925_0009256
478 Ga0395901_0725056
479 Ga0400490_51163
480 Ga0400491_03549
481 Ga0400486_18539
482 Ga0436361_0180624
483 Ga0451577_0304224
484 Ga0451577_0356440
485 Ga0453683_0000127
486 Ga0453683_0009418
487 Ga0453683_0038023
488 Ga0453684_0000768
489 Ga0453684_0844087
490 Ga0451576_0050796
491 Ga0451576_0074487
492 Ga0451576_0153284
493 Ga0495592_0191371
494 Ga0495641_0071604
495 Ga0495653_0074592
496 Ga0495653_0158611
497 Ga0495582_0052547
498 Ga0495628_0010050
499 Ga0495630_0012772
500 Ga0495663_0115450
501 Ga0495666_0095725
502 Ga0495640_0011018
503 Ga0495645_0134618
504 Ga0495667_0264681
505 Ga0495657_0136785
506 Ga0495599_0179065
507 Ga0495646_0182546
508 Ga0495647_0140061
509 Ga0495674_0088294
510 Ga0495674_0209026
511 Ga0495680_0006938
512 Ga0495680_0127829
513 Ga0495675_0032588
514 Ga0495677_0122916
515 Ga0495684_0340769
516 Ga0495686_0000179
517 Ga0496104_0384834
518 Ga0496109_0057539
519 Ga0496110_0278481
520 Ga0496112_0164573
521 Ga0496113_0035937
522 Ga0501031_0078182
523 Ga0501033_0009069
524 Ga0501034_0196019
525 Ga0501036_0059543
526 Ga0501037_0054209
527 Ga0501038_0190898
528 Ga0501038_0299302
529 Ga0501039_0031863
530 Ga0501039_0038944
531 Ga0501039_0112399
532 Ga0501040_0006028
533 Ga0501040_0061140
534 Ga0501041_0022367
535 Ga0501042_0014520
536 Ga0501047_0151107
537 Ga0501070_0023669
538 Ga0501072_0050273
539 Ga0501075_0001832
540 Ga0501076_0000428
541 Ga0501076_0043325
542 Ga0501076_0443680
543 Ga0501077_0004606
544 Ga0501077_0086652
545 Ga0501079_0026239
546 Ga0501079_0030510
547 Ga0501080_0083540
548 Ga0501081_0042706
549 Ga0501081_0078242
550 Ga0501081_0206861
551 Ga0501081_0427267
552 Ga0501044_0051149
553 Ga0501045_0002128
554 Ga0501045_0284913
555 nmdc:mga05p37_311175_c1
556 nmdc:mga06r32_97114_c1
557 nmdc:mga08y16_144890_c1
558 nmdc:mga0rr50_20306_c1
559 Ga0495601_0070946
560 Ga0495601_0076912
561 Ga0495619_0047917
562 Ga0495619_0051257
563 Ga0500593_000179
564 Ga0501084_0002710
565 Ga0501084_0033283
566 Ga0501084_0118584
567 Ga0590071_009026
568 Ga0590077_001596
569 Ga0501082_0003258
570 Ga0530510_0005344
571 Ga0530510_0464463
572 2643966651
573 2881413597
574 2929210980
575 2980182646
576 8055228180

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03725

RNase_PH_C

3' exoribonuclease family, domain 2

169

236

0.96

PF01138

RNase_PH

3' exoribonuclease family, domain 1

22

153

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
1udn-assembly1.cif.gz_A crystal structure of the trna processing enzyme rnase ph from aquifex aeolicus 0.9841 1 213
1udo-assembly1.cif.gz_A crystal structure of the trna processing enzyme rnase ph r86a mutant from aquifex aeolicus 0.9841 1 215
1uds-assembly1.cif.gz_A crystal structure of the trna processing enzyme rnase ph r126a mutant from aquifex aeolicus 0.9833 1 213
1udq-assembly1.cif.gz_A crystal structure of the trna processing enzyme rnase ph t125a mutant from aquifex aeolicus 0.981 1 215
1oyr-assembly1.cif.gz_C crystal structure of the phosphorolytic exoribonuclease rnase ph from bacillus subtilis 0.9788 1 221
ID Description Score Start End Superfamily
1oysA01 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;GHMP Kinase, N-terminal domain 0.9767 7 215 3.30.230.70
3dd6A01 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;GHMP Kinase, N-terminal domain 0.969 1 220 3.30.230.70
3dd6A01 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;GHMP Kinase, N-terminal domain 0.9604 1 220 3.30.230.70
2wnrF01 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;GHMP Kinase, N-terminal domain 0.9296 1 218 3.30.230.70
1oysA01 Alpha Beta;2-Layer Sandwich;Ribosomal Protein S5; domain 2;GHMP Kinase, N-terminal domain 0.9241 7 215 3.30.230.70
ID Description Score Start End GO Terms
AF-A0A3D1ILX6-F1-model_v4 Ribonuclease PH 1.002 68 220 GO:0000049
GO:0006364
GO:0008033
GO:0009022
GO:0016075
AF-A0A7V6T9G5-F1-model_v4 Ribonuclease PH 0.9976 62 216 GO:0000049
GO:0006364
GO:0008033
GO:0009022
GO:0016075
AF-A0A356UAB4-F1-model_v4 Ribonuclease PH 0.9974 97 217 GO:0000049
GO:0006364
GO:0008033
GO:0009022
GO:0016075
AF-A0A6I6MQL5-F1-model_v4 Ribonuclease PH (RNase PH) (EC 2.7.7.56) (tRNA nucleotidyltransferase) 0.997 1 212 GO:0000049
GO:0000175
GO:0006364
GO:0008033
GO:0009022
GO:0016075
AF-A0A1F2T318-F1-model_v4 Ribonuclease PH 0.9967 97 219 GO:0000049
GO:0006364
GO:0008033
GO:0009022
GO:0016075

Map