F388392

General Info

Members Datasets Scaffolds Average Seq Length
288 168 576 446

Family's Representative Sequence

Representative Sequence 3300005327|Ga0070658_10221009|Ga0070658_102210091
Length 495
Sequence MIFNPLNPSKGTLIDTDVKIDMFATKEIHSSKAQLLSSSAGRLSVKLFMKKRYDWSILIRVVLMFATLTTASFLLVKQLYLYEIIVLPIIFYQLVDFFNYHKKAQDEVEQFVESVHYRDFSRYFDVKHAPAELQPLRKGFNEINTTLKVISKEKETQYQYLQKILELVDTGILSYEMESGEVVWMNESLKKLLQVPYLKTIHSLSKRDWHLYHEIMALPLGENVITTVHLDKSSFKVLLSATAFQTEGKKYKLIAFQNVNEALDETESKAWQRLLSVMTHEIMNSVAPISSLSDTLKNMLNNSRDKVSELNKPAFEDIELGIDTIKRRSENLLKFAETYRNLNKITTPNLSKIYVRDLFENMHVLMQPTLDSKNIELDIILKDPDLIVEADTNLIEQVLINLIVNAIEAVKEQQESNIILSASHTPNNKTVIKVADNGAGMPEELLDQIFIPFFSTKKTGSGIGLSLCKQIMMLHKGNIHVQSKVGEGTAFSLQF

Samples

Sample ID Description Type Environment
1 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
8 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
9 3300003354 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS Metagenome Endosphere
10 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
11 3300003794 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 Metagenome Endosphere
12 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
13 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
14 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
15 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
16 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
17 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
18 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
19 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
20 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
21 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
22 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
23 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
24 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
25 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
26 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
27 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
28 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
29 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
30 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
31 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
32 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
33 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
34 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
35 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
36 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
37 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
38 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
39 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
40 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
41 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
42 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
43 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
44 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
45 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
46 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
47 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
48 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
49 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
50 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
51 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
52 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
53 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
54 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
55 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
56 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
57 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
58 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
61 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
63 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
66 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
67 3300013102 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaG Metagenome Rhizosphere
68 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
69 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
70 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
71 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
72 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
73 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
74 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
75 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
76 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
77 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
78 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
79 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
80 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
81 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
82 3300025304 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
120 3300030731 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 3 Metagenome Rhizosphere
121 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
122 3300030742 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 9 Metagenome Rhizosphere
123 3300030744 Rhizosphere soil microbial communities in a healthy wheat plant from a non-infected Wellcamp field in Toowoomba, Australia - sample 7 Metagenome Rhizosphere
124 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
125 3300031595 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-23 metaG Metagenome Rhizosphere
126 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
127 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
128 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
129 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
130 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
131 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
132 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
133 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
134 3300042014 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216WE14Z070717_5275 Metagenome Rhizosphere
135 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
136 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
137 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
138 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
139 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
140 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
141 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
142 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
143 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
144 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
145 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
146 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
147 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
148 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
152 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
154 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
155 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
156 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
157 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
158 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
159 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
160 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
161 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
162 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
163 2522125168 Dyadobacter beijingensis DSM 21582 Isolate Rhizosphere
164 2738541278 Niastella sp. CF465 Isolate Unclassified
165 2842903701 Olivibacter sp. R-72191 Isolate Unclassified
166 2911138879 Spirosoma sp. KUDC1026 Isolate Rhizosphere
167 2919692658 Algoriphagus sp. 4150 Isolate Rhizosphere
168 2977232053 Mucilaginibacter terrae SORGH_AS 422 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.92
Metatranscriptomes 0
Isolates 2.08

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.56
Nodule 0
Rhizoplane 0
Rhizosphere 90.28
Stem 0
Stem Tuber 0
Unclassified 3.12

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10221009 3300005327 Bacteria 1602
2 JGI24740J21852_10015485 3300001979 Bacteria 2783
3 JGI24751J29686_10001731 3300002459 Bacteria 4482
4 JGI25406J46586_10003708 3300003203 Bacteria 7158
5 rootH1_10065285 3300003316 Bacteria 2194
6 rootH2_10084738 3300003320 Bacteria 6232
7 rootL2_10050284 3300003322 Bacteria 5877
8 rootH1_10025730 3300003323 Bacteria 1880
9 rootH1_10104364 3300003323 Bacteria 6398
10 JGI25160J50197_1001108 3300003354 Bacteria 13762
11 Ga0055536_1010278 3300003781 Bacteria 3738
12 Ga0055531_10000487 3300003794 Bacteria 36358
13 Ga0065165_1000037 3300005262 Bacteria 212166
14 Ga0065165_1000746 3300005262 Bacteria 44688
15 Ga0065714_10006617 3300005288 Bacteria 5995
16 Ga0065704_10094318 3300005289 Bacteria 2549
17 Ga0065704_10095565 3300005289 Bacteria 2482
18 Ga0065712_10018723 3300005290 Bacteria 2094
19 Ga0065712_10068011 3300005290 Bacteria 17253
20 Ga0070683_100001414 3300005329 Bacteria 18428
21 Ga0070690_100101308 3300005330 Bacteria 1910
22 Ga0070670_100002975 3300005331 Bacteria 14033
23 Ga0070670_100090038 3300005331 Bacteria 2637
24 Ga0068869_100106310 3300005334 Bacteria 2130
25 Ga0070666_10044411 3300005335 Bacteria 2976
26 Ga0070680_100005880 3300005336 Bacteria 9314
27 Ga0070680_100096221 3300005336 Bacteria 2455
28 Ga0070682_100035374 3300005337 Bacteria 3049
29 Ga0070660_100010316 3300005339 Bacteria 6597
30 Ga0070660_100030471 3300005339 Bacteria 4047
31 Ga0070687_100078299 3300005343 Bacteria 1796
32 Ga0070671_100044320 3300005355 Bacteria 3696
33 Ga0070671_100116168 3300005355 Bacteria 2250
34 Ga0070671_100214274 3300005355 Bacteria 1634
35 Ga0070673_100049408 3300005364 Bacteria 3284
36 Ga0070659_100013489 3300005366 Bacteria 6082
37 Ga0070659_100054697 3300005366 Bacteria 3144
38 Ga0070713_100037053 3300005436 Bacteria 3941
39 Ga0070663_100089748 3300005455 Bacteria 2275
40 Ga0070681_10000779 3300005458 Bacteria 26513
41 Ga0070681_10026229 3300005458 Bacteria 5858
42 Ga0070681_10051262 3300005458 Bacteria 4116
43 Ga0068867_100075423 3300005459 Bacteria 2530
44 Ga0070685_10003883 3300005466 Bacteria 7557
45 Ga0070698_100003813 3300005471 Bacteria 16558
46 Ga0070698_100010623 3300005471 Bacteria 9810
47 Ga0070699_100125861 3300005518 Bacteria 2256
48 Ga0070679_100000174 3300005530 Bacteria 51897
49 Ga0070679_100019897 3300005530 Bacteria 6536
50 Ga0070684_100014530 3300005535 Bacteria 6381
51 Ga0070684_100022985 3300005535 Bacteria 5207
52 Ga0068853_100003599 3300005539 Bacteria 11862
53 Ga0068853_100023196 3300005539 Bacteria 5193
54 Ga0068853_100029383 3300005539 Bacteria 4633
55 Ga0068853_100043556 3300005539 Bacteria 3840
56 Ga0068853_100134833 3300005539 Bacteria 2212
57 Ga0070672_100186896 3300005543 Bacteria 1728
58 Ga0070665_100000001 3300005548 Bacteria 1083363
59 Ga0070704_100229146 3300005549 Bacteria 1515
60 Ga0068855_100000019 3300005563 Bacteria 205963
61 Ga0068855_100041100 3300005563 Bacteria 5483
62 Ga0068855_100065551 3300005563 Bacteria 4234
63 Ga0068855_100168426 3300005563 Bacteria 2482
64 Ga0070664_100012007 3300005564 Bacteria 7035
65 Ga0070664_100033765 3300005564 Bacteria 4288
66 Ga0068857_100018153 3300005577 Bacteria 6171
67 Ga0068857_100064920 3300005577 Bacteria 3246
68 Ga0068854_100021004 3300005578 Bacteria 4425
69 Ga0068852_100001246 3300005616 Bacteria 16960
70 Ga0068852_100012391 3300005616 Bacteria 6472
71 Ga0068852_100012683 3300005616 Bacteria 6411
72 Ga0068852_100125230 3300005616 Bacteria 2358
73 Ga0068852_100134431 3300005616 Bacteria 2282
74 Ga0068859_100185437 3300005617 Bacteria 2164
75 Ga0068864_100148236 3300005618 Bacteria 2123
76 Ga0068864_100223264 3300005618 Unclassified 1739
77 Ga0068861_100032415 3300005719 Bacteria 3846
78 Ga0068861_100270193 3300005719 Bacteria 1460
79 Ga0068863_100011113 3300005841 Bacteria 8730
80 Ga0068863_100065131 3300005841 Bacteria 3448
81 Ga0068863_100142104 3300005841 Bacteria 2294
82 Ga0068860_100009128 3300005843 Bacteria 9864
83 Ga0068860_100014778 3300005843 Bacteria 7635
84 Ga0081540_1016682 3300005983 Bacteria 4581
85 Ga0081539_10002763 3300005985 Bacteria 23621
86 Ga0070716_100163450 3300006173 Unclassified 1445
87 Ga0097621_100022032 3300006237 Bacteria 4940
88 Ga0097621_100025140 3300006237 Bacteria 4657
89 Ga0068871_100043296 3300006358 Bacteria 3616
90 Ga0068871_100153544 3300006358 Bacteria 1965
91 Ga0075428_100103910 3300006844 Bacteria 3098
92 Ga0075430_100004589 3300006846 Bacteria 11624
93 Ga0075429_100003929 3300006880 Bacteria 12709
94 Ga0075429_100224242 3300006880 Bacteria 1646
95 Ga0097620_100185450 3300006931 Bacteria 2164
96 Ga0105240_10014290 3300009093 Bacteria 10843
97 Ga0105240_10057632 3300009093 Bacteria 4852
98 Ga0105240_10079556 3300009093 Bacteria 4033
99 Ga0105240_10259030 3300009093 Bacteria 2007
100 Ga0114129_10071276 3300009147 Bacteria 4846
101 Ga0105241_10046846 3300009174 Bacteria 3284
102 Ga0105237_10001000 3300009545 Bacteria 38045
103 Ga0105237_10001907 3300009545 Bacteria 26596
104 Ga0105237_10003782 3300009545 Bacteria 17797
105 Ga0105237_10008667 3300009545 Bacteria 10987
106 Ga0105237_10018075 3300009545 Bacteria 7302
107 Ga0105237_10195703 3300009545 Bacteria 2021
108 Ga0105249_10003205 3300009553 Bacteria 14163
109 Ga0105239_10000013 3300010375 Bacteria 327371
110 Ga0105239_10000026 3300010375 Bacteria 248302
111 Ga0105239_10000029 3300010375 Bacteria 234749
112 Ga0105239_10006506 3300010375 Bacteria 13544
113 Ga0105239_10010409 3300010375 Bacteria 10405
114 Ga0105239_10018760 3300010375 Bacteria 7642
115 Ga0157373_10010163 3300013100 Bacteria 6933
116 Ga0157373_10018555 3300013100 Bacteria 5063
117 Ga0157373_10082192 3300013100 Bacteria 2270
118 Ga0157373_10131897 3300013100 Bacteria 1757
119 Ga0157371_10000318 3300013102 Bacteria 62463
120 Ga0157371_10000382 3300013102 Bacteria 55677
121 Ga0157371_10000652 3300013102 Bacteria 41124
122 Ga0157371_10013867 3300013102 Bacteria 6106
123 Ga0157371_10021134 3300013102 Bacteria 4783
124 Ga0157371_10061041 3300013102 Bacteria 2673
125 Ga0157371_10062632 3300013102 Bacteria 2637
126 Ga0157371_10122826 3300013102 Bacteria 1847
127 Ga0157370_10023868 3300013104 Bacteria 6065
128 Ga0157370_10045558 3300013104 Bacteria 4207
129 Ga0157370_10060833 3300013104 Bacteria 3584
130 Ga0157370_10081978 3300013104 Bacteria 3035
131 Ga0157370_10082333 3300013104 Bacteria 3027
132 Ga0157370_10127062 3300013104 Bacteria 2379
133 Ga0157369_10000461 3300013105 Bacteria 54029
134 Ga0157369_10006884 3300013105 Bacteria 13120
135 Ga0157369_10013923 3300013105 Bacteria 9088
136 Ga0157369_10040001 3300013105 Bacteria 5121
137 Ga0157374_10000001 3300013296 Bacteria 1077351
138 Ga0157378_10019901 3300013297 Bacteria 5901
139 Ga0163162_10026969 3300013306 Bacteria 5681
140 Ga0157372_10000001 3300013307 Bacteria 791349
141 Ga0157372_10007477 3300013307 Bacteria 11619
142 Ga0157372_10015258 3300013307 Bacteria 8229
143 Ga0157372_10199008 3300013307 Bacteria 2321
144 Ga0157372_10215597 3300013307 Bacteria 2225
145 Ga0157372_10230279 3300013307 Bacteria 2148
146 Ga0157372_10274675 3300013307 Bacteria 1959
147 Ga0157375_10031743 3300013308 Bacteria 5000
148 Ga0157375_10258628 3300013308 Bacteria 1902
149 Ga0163163_10080088 3300014325 Bacteria 3266
150 Ga0157380_10026316 3300014326 Unclassified 4417
151 Ga0157380_10144037 3300014326 Bacteria 2051
152 Ga0157377_10020462 3300014745 Unclassified 3467
153 Ga0157379_10115510 3300014968 Bacteria 2413
154 Ga0157376_10003467 3300014969 Bacteria 10869
155 Ga0209676_1000665 3300025292 Bacteria 49165
156 Ga0207426_1000059 3300025302 Bacteria 363842
157 Ga0209257_1000005 3300025304 Bacteria 1592528
158 Ga0207688_10012339 3300025901 Bacteria 4650
159 Ga0207647_10000356 3300025904 Bacteria 37148
160 Ga0207647_10008465 3300025904 Bacteria 7373
161 Ga0207685_10015541 3300025905 Bacteria 2414
162 Ga0207643_10015760 3300025908 Bacteria 4117
163 Ga0207707_10011490 3300025912 Bacteria 7711
164 Ga0207707_10020931 3300025912 Bacteria 5714
165 Ga0207695_10007580 3300025913 Bacteria 13761
166 Ga0207695_10022320 3300025913 Bacteria 7190
167 Ga0207695_10122398 3300025913 Bacteria 2568
168 Ga0207695_10155877 3300025913 Bacteria 2218
169 Ga0207671_10001803 3300025914 Bacteria 23938
170 Ga0207671_10015372 3300025914 Bacteria 5994
171 Ga0207671_10065377 3300025914 Bacteria 2705
172 Ga0207671_10108990 3300025914 Bacteria 2105
173 Ga0207660_10021080 3300025917 Bacteria 4379
174 Ga0207662_10040589 3300025918 Bacteria 2736
175 Ga0207657_10002672 3300025919 Bacteria 19227
176 Ga0207657_10073599 3300025919 Bacteria 2887
177 Ga0207652_10187420 3300025921 Bacteria 1860
178 Ga0207694_10167305 3300025924 Bacteria 1779
179 Ga0207650_10017258 3300025925 Bacteria 5052
180 Ga0207650_10068359 3300025925 Bacteria 2667
181 Ga0207659_10010035 3300025926 Bacteria 5931
182 Ga0207690_10007928 3300025932 Bacteria 6306
183 Ga0207690_10017919 3300025932 Bacteria 4334
184 Ga0207690_10028354 3300025932 Bacteria 3549
185 Ga0207706_10000657 3300025933 Bacteria 36545
186 Ga0207686_10004533 3300025934 Bacteria 7444
187 Ga0207686_10102657 3300025934 Bacteria 1912
188 Ga0207670_10078365 3300025936 Bacteria 2304
189 Ga0207669_10015419 3300025937 Bacteria 3854
190 Ga0207691_10142516 3300025940 Bacteria 2111
191 Ga0207691_10192315 3300025940 Bacteria 1779
192 Ga0207689_10021848 3300025942 Bacteria 5381
193 Ga0207689_10149260 3300025942 Bacteria 1927
194 Ga0207661_10061000 3300025944 Bacteria 3045
195 Ga0207679_10020181 3300025945 Bacteria 4494
196 Ga0207679_10128731 3300025945 Unclassified 2027
197 Ga0207667_10004975 3300025949 Bacteria 16235
198 Ga0207667_10031356 3300025949 Bacteria 5739
199 Ga0207712_10037525 3300025961 Bacteria 3307
200 Ga0207712_10077972 3300025961 Bacteria 2403
201 Ga0207640_10036925 3300025981 Bacteria 3070
202 Ga0207677_10188083 3300026023 Bacteria 1631
203 Ga0207639_10010289 3300026041 Bacteria 6475
204 Ga0207639_10060813 3300026041 Bacteria 2915
205 Ga0207639_10077218 3300026041 Bacteria 2624
206 Ga0207639_10137523 3300026041 Bacteria 2031
207 Ga0207639_10139206 3300026041 Bacteria 2020
208 Ga0207708_10080757 3300026075 Bacteria 2498
209 Ga0207641_10007319 3300026088 Bacteria 9194
210 Ga0207648_10070658 3300026089 Bacteria 3043
211 Ga0207648_10143299 3300026089 Bacteria 2107
212 Ga0207676_10151918 3300026095 Bacteria 1995
213 Ga0207674_10004487 3300026116 Bacteria 16776
214 Ga0207674_10039625 3300026116 Bacteria 4883
215 Ga0207674_10041675 3300026116 Bacteria 4746
216 Ga0207674_10046284 3300026116 Bacteria 4467
217 Ga0207674_10085893 3300026116 Bacteria 3141
218 Ga0207674_10264259 3300026116 Unclassified 1668
219 Ga0207675_100009744 3300026118 Bacteria 8994
220 Ga0207675_100237441 3300026118 Bacteria 1760
221 Ga0207698_10004777 3300026142 Bacteria 8290
222 Ga0207698_10048335 3300026142 Bacteria 3229
223 Ga0207698_10206547 3300026142 Unclassified 1763
224 Ga0268264_10003492 3300028381 Bacteria 13543
225 Ga0268264_10005175 3300028381 Bacteria 11053
226 Ga0307515_10065573 3300028794 Bacteria 5050
227 Ga0307515_10241481 3300028794 Bacteria 1576
228 Ga0316177_1116921 3300030731 Bacteria 31477
229 Ga0316176_1133191 3300030732 Bacteria 21352
230 Ga0316183_1054866 3300030742 Bacteria 36207
231 Ga0316181_1126086 3300030744 Bacteria 12112
232 Ga0307509_10145675 3300031507 Bacteria 2295
233 Ga0265313_10034229 3300031595 Bacteria 2571
234 Ga0307414_10000076 3300032004 Bacteria 93668
235 Ga0307414_10097977 3300032004 Unclassified 2198
236 Ga0307510_10004870 3300033180 Bacteria 15875
237 Ga0395899_0000002 3300037312 Bacteria 1324310
238 Ga0395899_0000126 3300037312 Bacteria 120125
239 Ga0395899_0000232 3300037312 Bacteria 75259
240 Ga0395900_0108277 3300037418 Bacteria 2855
241 Ga0395905_0053086 3300037471 Bacteria 3795
242 Ga0395901_0003736 3300038443 Bacteria 15337
243 Ga0439436_0002738 3300041404 Bacteria 5330
244 Ga0439449_0011841 3300042007 Bacteria 3279
245 Ga0439457_001673 3300042014 Bacteria 6582
246 Ga0450923_004875 3300042125 Bacteria 2133
247 Ga0451577_0004532 3300042876 Bacteria 14623
248 Ga0451577_0050234 3300042876 Bacteria 3724
249 Ga0466969_0035940 3300044656 Bacteria 2505
250 Ga0453683_0027914 3300044673 Bacteria 3577
251 Ga0453683_0031202 3300044673 Bacteria 3367
252 Ga0466965_0004569 3300044683 Bacteria 6163
253 Ga0453684_0003408 3300044712 Bacteria 35904
254 Ga0453684_0161332 3300044712 Bacteria 2652
255 Ga0453684_0366997 3300044712 Bacteria 1619
256 Ga0466970_0015048 3300044765 Bacteria 3979
257 Ga0466957_0000217 3300044842 Bacteria 27083
258 Ga0466959_0044504 3300045049 Bacteria 3271
259 Ga0451576_0010035 3300045051 Bacteria 10905
260 Ga0466967_0051758 3300045976 Bacteria 3601
261 Ga0495611_0000021 3300046648 Bacteria 123657
262 Ga0495661_0000429 3300046665 Bacteria 44378
263 Ga0501033_0046175 3300049570 Bacteria 3239
264 Ga0501034_0041463 3300049571 Bacteria 4657
265 Ga0501034_0246634 3300049571 Bacteria 1731
266 Ga0501043_0118168 3300049579 Bacteria 2080
267 Ga0501070_0045676 3300049586 Bacteria 3643
268 Ga0501035_0077263 3300049822 Bacteria 2942
269 Ga0501044_0055347 3300049823 Bacteria 4075
270 Ga0501044_0128599 3300049823 Bacteria 2529
271 nmdc:mga05p37_62798_c1 3300050507 Bacteria 4571
272 nmdc:mga09592_19560_c1 3300050508 Bacteria 5561
273 nmdc:mga0qj67_66337_c1 3300050509 Bacteria 2875
274 Ga0500641_0022773 3300053096 Bacteria 2403
275 Ga0500556_0019216 3300053104 Unclassified 2169
276 Ga0500568_0000346 3300053139 Bacteria 36068
277 Ga0500604_0000347 3300053151 Bacteria 12780
278 Ga0500604_0001323 3300053151 Bacteria 6901
279 Ga0500622_0000012 3300053156 Bacteria 383183
280 Ga0500622_0000030 3300053156 Bacteria 208734
281 Ga0500622_0003791 3300053156 Bacteria 9848
282 Ga0466962_0008289 3300061719 Bacteria 4980
283 2522549898 2522125168 Bacteria 7376607
284 2738727838 2738541278 Bacteria 9755573
285 2842905356 2842903701 Bacteria 6986368
286 2911140825 2911138879 Bacteria 5811561
287 2919697702 2919692658 Bacteria 5943958
288 2977232802 2977232053 Bacteria 5485925
289 Ga0070658_10221009
290 JGI24740J21852_10015485
291 JGI24751J29686_10001731
292 JGI25406J46586_10003708
293 rootH1_10065285
294 rootH2_10084738
295 rootL2_10050284
296 rootH1_10025730
297 rootH1_10104364
298 JGI25160J50197_1001108
299 Ga0055536_1010278
300 Ga0055531_10000487
301 Ga0065165_1000037
302 Ga0065165_1000746
303 Ga0065714_10006617
304 Ga0065704_10094318
305 Ga0065704_10095565
306 Ga0065712_10018723
307 Ga0065712_10068011
308 Ga0070683_100001414
309 Ga0070690_100101308
310 Ga0070670_100002975
311 Ga0070670_100090038
312 Ga0068869_100106310
313 Ga0070666_10044411
314 Ga0070680_100005880
315 Ga0070680_100096221
316 Ga0070682_100035374
317 Ga0070660_100010316
318 Ga0070660_100030471
319 Ga0070687_100078299
320 Ga0070671_100044320
321 Ga0070671_100116168
322 Ga0070671_100214274
323 Ga0070673_100049408
324 Ga0070659_100013489
325 Ga0070659_100054697
326 Ga0070713_100037053
327 Ga0070663_100089748
328 Ga0070681_10000779
329 Ga0070681_10026229
330 Ga0070681_10051262
331 Ga0068867_100075423
332 Ga0070685_10003883
333 Ga0070698_100003813
334 Ga0070698_100010623
335 Ga0070699_100125861
336 Ga0070679_100000174
337 Ga0070679_100019897
338 Ga0070684_100014530
339 Ga0070684_100022985
340 Ga0068853_100003599
341 Ga0068853_100023196
342 Ga0068853_100029383
343 Ga0068853_100043556
344 Ga0068853_100134833
345 Ga0070672_100186896
346 Ga0070665_100000001
347 Ga0070704_100229146
348 Ga0068855_100000019
349 Ga0068855_100041100
350 Ga0068855_100065551
351 Ga0068855_100168426
352 Ga0070664_100012007
353 Ga0070664_100033765
354 Ga0068857_100018153
355 Ga0068857_100064920
356 Ga0068854_100021004
357 Ga0068852_100001246
358 Ga0068852_100012391
359 Ga0068852_100012683
360 Ga0068852_100125230
361 Ga0068852_100134431
362 Ga0068859_100185437
363 Ga0068864_100148236
364 Ga0068864_100223264
365 Ga0068861_100032415
366 Ga0068861_100270193
367 Ga0068863_100011113
368 Ga0068863_100065131
369 Ga0068863_100142104
370 Ga0068860_100009128
371 Ga0068860_100014778
372 Ga0081540_1016682
373 Ga0081539_10002763
374 Ga0070716_100163450
375 Ga0097621_100022032
376 Ga0097621_100025140
377 Ga0068871_100043296
378 Ga0068871_100153544
379 Ga0075428_100103910
380 Ga0075430_100004589
381 Ga0075429_100003929
382 Ga0075429_100224242
383 Ga0097620_100185450
384 Ga0105240_10014290
385 Ga0105240_10057632
386 Ga0105240_10079556
387 Ga0105240_10259030
388 Ga0114129_10071276
389 Ga0105241_10046846
390 Ga0105237_10001000
391 Ga0105237_10001907
392 Ga0105237_10003782
393 Ga0105237_10008667
394 Ga0105237_10018075
395 Ga0105237_10195703
396 Ga0105249_10003205
397 Ga0105239_10000013
398 Ga0105239_10000026
399 Ga0105239_10000029
400 Ga0105239_10006506
401 Ga0105239_10010409
402 Ga0105239_10018760
403 Ga0157373_10010163
404 Ga0157373_10018555
405 Ga0157373_10082192
406 Ga0157373_10131897
407 Ga0157371_10000318
408 Ga0157371_10000382
409 Ga0157371_10000652
410 Ga0157371_10013867
411 Ga0157371_10021134
412 Ga0157371_10061041
413 Ga0157371_10062632
414 Ga0157371_10122826
415 Ga0157370_10023868
416 Ga0157370_10045558
417 Ga0157370_10060833
418 Ga0157370_10081978
419 Ga0157370_10082333
420 Ga0157370_10127062
421 Ga0157369_10000461
422 Ga0157369_10006884
423 Ga0157369_10013923
424 Ga0157369_10040001
425 Ga0157374_10000001
426 Ga0157378_10019901
427 Ga0163162_10026969
428 Ga0157372_10000001
429 Ga0157372_10007477
430 Ga0157372_10015258
431 Ga0157372_10199008
432 Ga0157372_10215597
433 Ga0157372_10230279
434 Ga0157372_10274675
435 Ga0157375_10031743
436 Ga0157375_10258628
437 Ga0163163_10080088
438 Ga0157380_10026316
439 Ga0157380_10144037
440 Ga0157377_10020462
441 Ga0157379_10115510
442 Ga0157376_10003467
443 Ga0209676_1000665
444 Ga0207426_1000059
445 Ga0209257_1000005
446 Ga0207688_10012339
447 Ga0207647_10000356
448 Ga0207647_10008465
449 Ga0207685_10015541
450 Ga0207643_10015760
451 Ga0207707_10011490
452 Ga0207707_10020931
453 Ga0207695_10007580
454 Ga0207695_10022320
455 Ga0207695_10122398
456 Ga0207695_10155877
457 Ga0207671_10001803
458 Ga0207671_10015372
459 Ga0207671_10065377
460 Ga0207671_10108990
461 Ga0207660_10021080
462 Ga0207662_10040589
463 Ga0207657_10002672
464 Ga0207657_10073599
465 Ga0207652_10187420
466 Ga0207694_10167305
467 Ga0207650_10017258
468 Ga0207650_10068359
469 Ga0207659_10010035
470 Ga0207690_10007928
471 Ga0207690_10017919
472 Ga0207690_10028354
473 Ga0207706_10000657
474 Ga0207686_10004533
475 Ga0207686_10102657
476 Ga0207670_10078365
477 Ga0207669_10015419
478 Ga0207691_10142516
479 Ga0207691_10192315
480 Ga0207689_10021848
481 Ga0207689_10149260
482 Ga0207661_10061000
483 Ga0207679_10020181
484 Ga0207679_10128731
485 Ga0207667_10004975
486 Ga0207667_10031356
487 Ga0207712_10037525
488 Ga0207712_10077972
489 Ga0207640_10036925
490 Ga0207677_10188083
491 Ga0207639_10010289
492 Ga0207639_10060813
493 Ga0207639_10077218
494 Ga0207639_10137523
495 Ga0207639_10139206
496 Ga0207708_10080757
497 Ga0207641_10007319
498 Ga0207648_10070658
499 Ga0207648_10143299
500 Ga0207676_10151918
501 Ga0207674_10004487
502 Ga0207674_10039625
503 Ga0207674_10041675
504 Ga0207674_10046284
505 Ga0207674_10085893
506 Ga0207674_10264259
507 Ga0207675_100009744
508 Ga0207675_100237441
509 Ga0207698_10004777
510 Ga0207698_10048335
511 Ga0207698_10206547
512 Ga0268264_10003492
513 Ga0268264_10005175
514 Ga0307515_10065573
515 Ga0307515_10241481
516 Ga0316177_1116921
517 Ga0316176_1133191
518 Ga0316183_1054866
519 Ga0316181_1126086
520 Ga0307509_10145675
521 Ga0265313_10034229
522 Ga0307414_10000076
523 Ga0307414_10097977
524 Ga0307510_10004870
525 Ga0395899_0000002
526 Ga0395899_0000126
527 Ga0395899_0000232
528 Ga0395900_0108277
529 Ga0395905_0053086
530 Ga0395901_0003736
531 Ga0439436_0002738
532 Ga0439449_0011841
533 Ga0439457_001673
534 Ga0450923_004875
535 Ga0451577_0004532
536 Ga0451577_0050234
537 Ga0466969_0035940
538 Ga0453683_0027914
539 Ga0453683_0031202
540 Ga0466965_0004569
541 Ga0453684_0003408
542 Ga0453684_0161332
543 Ga0453684_0366997
544 Ga0466970_0015048
545 Ga0466957_0000217
546 Ga0466959_0044504
547 Ga0451576_0010035
548 Ga0466967_0051758
549 Ga0495611_0000021
550 Ga0495661_0000429
551 Ga0501033_0046175
552 Ga0501034_0041463
553 Ga0501034_0246634
554 Ga0501043_0118168
555 Ga0501070_0045676
556 Ga0501035_0077263
557 Ga0501044_0055347
558 Ga0501044_0128599
559 nmdc:mga05p37_62798_c1
560 nmdc:mga09592_19560_c1
561 nmdc:mga0qj67_66337_c1
562 Ga0500641_0022773
563 Ga0500556_0019216
564 Ga0500568_0000346
565 Ga0500604_0000347
566 Ga0500604_0001323
567 Ga0500622_0000012
568 Ga0500622_0000030
569 Ga0500622_0003791
570 Ga0466962_0008289
571 2522549898
572 2738727838
573 2842905356
574 2911140825
575 2919697702
576 2977232802

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02518

HATPase_c

Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase

390

495

0.9

PF14501

HATPase_c_5

GHKL domain

391

491

0.85

Structural Annotation

Top 5 Hits

ID Description Score Start End
3a0w-assembly2.cif.gz_B catalytic domain of histidine kinase thka (tm1359) for mad phasing (nucleotide free form 2, orthorombic) 0.9153 308 454
3a0z-assembly1.cif.gz_A catalytic domain of histidine kinase thka (tm1359) (nucleotide free form 4: isopropanol, orthorombic) 0.9141 308 454
3a0z-assembly2.cif.gz_B catalytic domain of histidine kinase thka (tm1359) (nucleotide free form 4: isopropanol, orthorombic) 0.908 308 454
3jz3-assembly1.cif.gz_A structure of the cytoplasmic segment of histidine kinase qsec 0.9029 308 454
3a0y-assembly1.cif.gz_A catalytic domain of histidine kinase thka (tm1359) (nucleotide free form 3: 1,2-propanediol, orthorombic) 0.8998 308 454
ID Description Score Start End Superfamily
4q20B02 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9391 307 454 3.30.565.10
af_P14377_310_462_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9255 307 454 3.30.565.10
4jauA02 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9235 308 454 3.30.565.10
af_Q06067_453_606_3.30.565.10 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9209 308 454 3.30.565.10
4q20B02 Alpha Beta;2-Layer Sandwich;Heat Shock Protein 90;Histidine kinase-like ATPase, C-terminal domain 0.9203 307 454 3.30.565.10
ID Description Score Start End GO Terms
AF-A0A388PF32-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9138 307 454 GO:0016301
AF-A0A3M2CH58-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.91 309 454 GO:0016301
AF-A0A537TJX8-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9084 352 454 GO:0000155
AF-A0A3M1EZC5-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9055 352 454 GO:0016772
AF-A0A3C1ZGB7-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9013 306 454 GO:0000155
GO:0005886
GO:0009927

Map