F388079

General Info

Members Datasets Scaffolds Average Seq Length
287 192 574 147

Family's Representative Sequence

Representative Sequence 3300031691|Ga0316579_10201461|Ga0316579_102014611
Length 181
Sequence MALTLDVQCASDAPGIPPASRLETWVRAAINGTADRPRERAELSLRIVDDDEGAELNQRYRGRQGPTNVLSFPFEAPEIPAPDESELLDDYATLAAELDGLLGDIVICAPVVAREAAEQHKALDAHWAHLVVHGVLHLLGHDHIDPAEAARMEALETAILGGLGFPPPYEGPEISHDERSI

Samples

Sample ID Description Type Environment
1 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
2 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
3 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
4 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
10 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
11 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
12 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
13 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
14 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
15 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
16 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
19 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
20 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
23 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
24 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
25 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
26 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
29 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
30 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
31 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
32 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
33 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
34 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
35 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
36 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
37 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
38 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
39 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
40 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
41 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
43 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
44 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
45 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
46 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
47 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
48 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
49 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
50 3300009987 Switchgrass associated microbial communities from Austin, Texas, USA, to study host-microbe interactions - RS_213 metaG Metagenome Rhizosphere
51 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
52 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
53 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
54 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
55 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
56 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
59 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
89 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
90 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
91 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
92 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
93 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
94 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
95 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
96 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
97 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
98 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
99 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
100 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
101 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
102 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
103 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
104 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
105 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
106 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
107 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
108 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
109 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
110 3300033528 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
111 3300033541 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
112 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
113 3300035084 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_1 Metagenome Rhizosphere
114 3300035085 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_2 Metagenome Rhizosphere
115 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
116 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
117 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
118 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
119 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
120 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
121 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
122 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
123 3300041405 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z080117_5414 Metagenome Rhizosphere
124 3300041407 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z080117_5416 Metagenome Rhizosphere
125 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
126 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
127 3300042001 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z081617_5542 Metagenome Rhizosphere
128 3300042002 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z082817_5616 Metagenome Rhizosphere
129 3300042003 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821FE14Z081617_5551 Metagenome Rhizosphere
130 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
131 3300042009 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z071817_5348 Metagenome Rhizosphere
132 3300042011 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0220FE14Z062817_5204 Metagenome Rhizosphere
133 3300042115 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_080116_2642 Metagenome Rhizosphere
134 3300042121 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515D_E14_082716_2398 Metagenome Rhizosphere
135 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
136 3300042123 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0117W_E14_082716_2228 Metagenome Rhizosphere
137 3300042125 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_082716_2472 Metagenome Rhizosphere
138 3300042131 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0225D_E14_070716_130 Metagenome Rhizosphere
139 3300042132 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_070716_133 Metagenome Rhizosphere
140 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
141 3300042135 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926W_E14_070716_127 Metagenome Rhizosphere
142 3300042145 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0430D_E14_080116_2581 Metagenome Rhizosphere
143 3300042147 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_080116_2618 Metagenome Rhizosphere
144 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
145 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
146 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
147 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
148 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
149 3300042531 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0117D_E14_082716_2253 Metagenome Rhizosphere
150 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
151 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
152 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
153 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
154 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
155 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
156 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
157 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
158 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
159 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
160 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
168 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
169 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
170 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
171 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
172 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
173 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
174 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
175 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
176 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
177 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
178 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
179 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
180 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
181 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
182 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
183 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
184 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
185 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
186 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
187 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
188 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
189 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
190 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
191 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
192 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 97.56
Metatranscriptomes 2.44
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0.35
Rhizosphere 98.95
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0316579_10201461 3300031691 Bacteria 962
2 Ga0068869_100439380 3300005334 Bacteria 1080
3 Ga0070680_100211173 3300005336 Bacteria 1638
4 Ga0070680_100846433 3300005336 Bacteria 788
5 Ga0068868_100217374 3300005338 Bacteria 1599
6 Ga0068868_100511959 3300005338 Bacteria 1052
7 Ga0070689_100628042 3300005340 Bacteria 933
8 Ga0070687_100443515 3300005343 Bacteria 862
9 Ga0070675_100006112 3300005354 Bacteria 9236
10 Ga0070675_100351236 3300005354 Bacteria 1307
11 Ga0070674_100149558 3300005356 Bacteria 1761
12 Ga0070673_100247067 3300005364 Bacteria 1554
13 Ga0070659_100912919 3300005366 Bacteria 768
14 Ga0070667_102162090 3300005367 Bacteria 524
15 Ga0070713_101528155 3300005436 Bacteria 648
16 Ga0070701_10011814 3300005438 Bacteria 3921
17 Ga0070700_100655100 3300005441 Bacteria 830
18 Ga0070694_100088975 3300005444 Bacteria 2163
19 Ga0070662_101692908 3300005457 Bacteria 546
20 Ga0070681_10010847 3300005458 Bacteria 9006
21 Ga0070685_10361817 3300005466 Bacteria 995
22 Ga0070698_100800408 3300005471 Bacteria 886
23 Ga0070679_100013271 3300005530 Bacteria 7886
24 Ga0068853_101235419 3300005539 Bacteria 722
25 Ga0070672_100626235 3300005543 Bacteria 938
26 Ga0070686_101226435 3300005544 Bacteria 624
27 Ga0070693_100296317 3300005547 Bacteria 1088
28 Ga0070693_100685858 3300005547 Bacteria 748
29 Ga0070665_101473933 3300005548 Bacteria 689
30 Ga0070704_100055000 3300005549 Bacteria 2820
31 Ga0068857_100031764 3300005577 Bacteria 4666
32 Ga0068854_101217026 3300005578 Bacteria 675
33 Ga0068859_100084082 3300005617 Bacteria 3226
34 Ga0068859_101631355 3300005617 Bacteria 712
35 Ga0068864_101601486 3300005618 Bacteria 655
36 Ga0068870_10243914 3300005840 Bacteria 1111
37 Ga0068863_101707893 3300005841 Bacteria 639
38 Ga0068858_100047829 3300005842 Bacteria 3965
39 Ga0068858_100068788 3300005842 Bacteria 3281
40 Ga0070712_100858424 3300006175 Bacteria 781
41 Ga0097621_100737742 3300006237 Bacteria 909
42 Ga0075428_100021500 3300006844 Bacteria 7141
43 Ga0075428_100777956 3300006844 Bacteria 1018
44 Ga0075434_100117675 3300006871 Bacteria 2670
45 Ga0075434_100588813 3300006871 Bacteria 1131
46 Ga0075429_100848032 3300006880 Bacteria 800
47 Ga0068865_100126323 3300006881 Bacteria 1909
48 Ga0075436_100076015 3300006914 Bacteria 2325
49 Ga0097620_100084082 3300006931 Bacteria 3226
50 Ga0097620_101632143 3300006931 Bacteria 712
51 Ga0105240_11198210 3300009093 Bacteria 804
52 Ga0111539_10005138 3300009094 Bacteria 16970
53 Ga0105245_10413910 3300009098 Bacteria 1350
54 Ga0105243_10487683 3300009148 Bacteria 1165
55 Ga0105243_11764297 3300009148 Bacteria 649
56 Ga0105241_10378399 3300009174 Bacteria 1236
57 Ga0105242_10014096 3300009176 Bacteria 6189
58 Ga0105242_10346367 3300009176 Bacteria 1371
59 Ga0105242_10635351 3300009176 Bacteria 1036
60 Ga0105248_10182373 3300009177 Bacteria 2365
61 Ga0105238_10156985 3300009551 Bacteria 2250
62 Ga0105238_10232373 3300009551 Bacteria 1820
63 Ga0105030_100021 3300009987 Bacteria 12452
64 Ga0105239_11341593 3300010375 Bacteria 825
65 Ga0157378_10788950 3300013297 Bacteria 975
66 Ga0163162_10086622 3300013306 Bacteria 3210
67 Ga0157375_10411276 3300013308 Bacteria 1519
68 Ga0157380_10045405 3300014326 Bacteria 3448
69 Ga0157377_10187298 3300014745 Bacteria 1305
70 Ga0157379_10578563 3300014968 Bacteria 1047
71 Ga0163161_10446459 3300017792 Bacteria 1045
72 Ga0207697_10345209 3300025315 Bacteria 661
73 Ga0207642_10808685 3300025899 Bacteria 596
74 Ga0207645_10767377 3300025907 Bacteria 656
75 Ga0207643_10059568 3300025908 Bacteria 2178
76 Ga0207654_10285019 3300025911 Bacteria 1118
77 Ga0207707_10015840 3300025912 Bacteria 6574
78 Ga0207663_10728705 3300025916 Bacteria 786
79 Ga0207660_10065834 3300025917 Bacteria 2620
80 Ga0207662_10412596 3300025918 Bacteria 918
81 Ga0207662_10551393 3300025918 Bacteria 798
82 Ga0207652_10239180 3300025921 Bacteria 1636
83 Ga0207681_10377403 3300025923 Bacteria 1141
84 Ga0207694_10102101 3300025924 Bacteria 2273
85 Ga0207694_10245029 3300025924 Bacteria 1465
86 Ga0207659_10043471 3300025926 Bacteria 3155
87 Ga0207659_10144865 3300025926 Bacteria 1848
88 Ga0207659_10369435 3300025926 Bacteria 1194
89 Ga0207664_10401319 3300025929 Bacteria 1219
90 Ga0207686_10010191 3300025934 Bacteria 5110
91 Ga0207686_10505521 3300025934 Bacteria 938
92 Ga0207670_10474847 3300025936 Bacteria 1012
93 Ga0207669_10098767 3300025937 Bacteria 1923
94 Ga0207691_10702763 3300025940 Bacteria 853
95 Ga0207711_10496732 3300025941 Bacteria 1137
96 Ga0207651_10065280 3300025960 Bacteria 2552
97 Ga0207651_10220139 3300025960 Bacteria 1534
98 Ga0207658_11114560 3300025986 Bacteria 721
99 Ga0207677_10124704 3300026023 Bacteria 1944
100 Ga0207703_10002767 3300026035 Bacteria 15018
101 Ga0207703_10395938 3300026035 Bacteria 1280
102 Ga0207708_10450025 3300026075 Bacteria 1072
103 Ga0207648_10033754 3300026089 Bacteria 4513
104 Ga0207648_10105479 3300026089 Bacteria 2472
105 Ga0207648_11323788 3300026089 Bacteria 677
106 Ga0207674_10018545 3300026116 Bacteria 7560
107 Ga0207675_100923644 3300026118 Bacteria 889
108 Ga0207683_10230856 3300026121 Bacteria 1688
109 Ga0209971_1017415 3300027682 Bacteria 1703
110 Ga0207428_10072750 3300027907 Bacteria 2698
111 Ga0307408_100010061 3300031548 Bacteria 6232
112 Ga0307408_100049047 3300031548 Bacteria 3031
113 Ga0316575_10050485 3300031665 Bacteria 1656
114 Ga0316579_10105734 3300031691 Bacteria 1349
115 Ga0316579_10234064 3300031691 Bacteria 888
116 Ga0265314_10109775 3300031711 Bacteria 1755
117 Ga0316576_10095948 3300031727 Bacteria 2212
118 Ga0316576_10215020 3300031727 Bacteria 1446
119 Ga0316578_10009438 3300031728 Bacteria 5020
120 Ga0316578_10128911 3300031728 Bacteria 1521
121 Ga0316578_10319187 3300031728 Bacteria 927
122 Ga0307405_10023101 3300031731 Bacteria 3528
123 Ga0307405_10067778 3300031731 Bacteria 2281
124 Ga0307405_10354408 3300031731 Bacteria 1133
125 Ga0316577_10007230 3300031733 Bacteria 5917
126 Ga0316577_10094916 3300031733 Bacteria 1670
127 Ga0307410_10005148 3300031852 Bacteria 6880
128 Ga0307406_10013992 3300031901 Bacteria 4608
129 Ga0307407_10430515 3300031903 Bacteria 953
130 Ga0307407_10635336 3300031903 Bacteria 798
131 Ga0307412_10019756 3300031911 Bacteria 4087
132 Ga0307409_100037675 3300031995 Bacteria 3567
133 Ga0307409_101055551 3300031995 Bacteria 832
134 Ga0307416_100007155 3300032002 Bacteria 7058
135 Ga0307416_100015140 3300032002 Bacteria 5314
136 Ga0307416_100072866 3300032002 Bacteria 2861
137 Ga0307416_100821738 3300032002 Bacteria 1026
138 Ga0307416_102711508 3300032002 Bacteria 592
139 Ga0307414_10020685 3300032004 Bacteria 4108
140 Ga0307411_10005403 3300032005 Bacteria 6271
141 Ga0307411_10043649 3300032005 Bacteria 2870
142 Ga0307411_10929112 3300032005 Bacteria 775
143 Ga0307411_10993599 3300032005 Bacteria 751
144 Ga0307415_100007944 3300032126 Bacteria 5842
145 Ga0307415_100529108 3300032126 Bacteria 1036
146 Ga0316583_10158514 3300032133 Bacteria 788
147 Ga0316585_10007548 3300032137 Bacteria 3140
148 Ga0316580_10004451 3300032139 Bacteria 4064
149 Ga0316593_10032191 3300032168 Bacteria 1712
150 Ga0316593_10141555 3300032168 Bacteria 871
151 Ga0316592_1012289 3300033524 Bacteria 1752
152 Ga0316592_1044690 3300033524 Bacteria 985
153 Ga0316588_1001154 3300033528 Bacteria 4194
154 Ga0316588_1023737 3300033528 Bacteria 1409
155 Ga0316596_1050406 3300033541 Bacteria 1101
156 Ga0373938_0110756 3300034957 Bacteria 699
157 Ga0373928_0170254 3300035084 Bacteria 614
158 Ga0373929_0050240 3300035085 Bacteria 951
159 Ga0373949_0206090 3300035090 Bacteria 592
160 Ga0373943_0533427 3300035170 Bacteria 688
161 Ga0316574_0043690 3300035398 Bacteria 2770
162 Ga0316574_0168746 3300035398 Bacteria 1409
163 Ga0316574_0198405 3300035398 Bacteria 1289
164 Ga0316574_0312929 3300035398 Bacteria 997
165 Ga0316574_0360781 3300035398 Bacteria 918
166 Ga0373927_0012176 3300035695 Bacteria 5722
167 Ga0316582_0003913 3300036647 Bacteria 7425
168 Ga0316582_0305390 3300036647 Bacteria 1093
169 Ga0316584_0009272 3300036712 Bacteria 6822
170 Ga0316584_0248296 3300036712 Bacteria 1300
171 Ga0316584_0378787 3300036712 Bacteria 1011
172 Ga0373925_0020384 3300037068 Bacteria 4826
173 Ga0373925_0312286 3300037068 Bacteria 1271
174 Ga0400487_22360 3300039110 Bacteria 76631
175 Ga0439438_126306 3300041405 Bacteria 614
176 Ga0439447_045427 3300041407 Bacteria 1060
177 Ga0451800_0169867 3300041459 Bacteria 1147
178 Ga0451853_0613897 3300041512 Bacteria 942
179 Ga0439441_006261 3300042001 Bacteria 1881
180 Ga0439442_033755 3300042002 Bacteria 1070
181 Ga0439443_003945 3300042003 Bacteria 1905
182 Ga0439450_039168 3300042008 Bacteria 1095
183 Ga0439451_061198 3300042009 Bacteria 753
184 Ga0439454_001506 3300042011 Bacteria 2258
185 Ga0450911_032035 3300042115 Bacteria 682
186 Ga0450919_007287 3300042121 Bacteria 1294
187 Ga0450920_001701 3300042122 Bacteria 3683
188 Ga0450920_001921 3300042122 Bacteria 3493
189 Ga0450921_000390 3300042123 Bacteria 2025
190 Ga0450921_004095 3300042123 Bacteria 1052
191 Ga0450923_000308 3300042125 Bacteria 4987
192 Ga0450923_019368 3300042125 Bacteria 1310
193 Ga0450894_001253 3300042131 Bacteria 3723
194 Ga0450895_004429 3300042132 Bacteria 1109
195 Ga0450896_001668 3300042133 Bacteria 2780
196 Ga0450896_009996 3300042133 Bacteria 1327
197 Ga0450899_013679 3300042135 Bacteria 918
198 Ga0450899_031525 3300042135 Bacteria 645
199 Ga0450906_006263 3300042145 Bacteria 2408
200 Ga0450910_006924 3300042147 Bacteria 1571
201 Ga0439446_0027315 3300042156 Bacteria 1638
202 Ga0439446_0027391 3300042156 Bacteria 1635
203 Ga0450908_001002 3300042184 Bacteria 5468
204 Ga0450908_003742 3300042184 Bacteria 2947
205 Ga0439434_0003774 3300042435 Bacteria 4427
206 Ga0439434_0089488 3300042435 Bacteria 983
207 Ga0439435_0000095 3300042436 Bacteria 11046
208 Ga0439444_0002658 3300042437 Bacteria 2463
209 Ga0450918_003403 3300042531 Bacteria 2955
210 Ga0450918_006725 3300042531 Bacteria 2046
211 Ga0451576_0880332 3300045051 Bacteria 940
212 Ga0495642_0113521 3300046528 Bacteria 1159
213 Ga0495647_0531438 3300046681 Bacteria 549
214 Ga0495658_0189794 3300046683 Bacteria 1277
215 Ga0495672_0206365 3300047320 Bacteria 979
216 Ga0501031_0120859 3300049568 Bacteria 1711
217 Ga0501032_0060101 3300049569 Bacteria 2549
218 Ga0501033_0062770 3300049570 Bacteria 2736
219 Ga0501036_0270547 3300049572 Bacteria 1422
220 Ga0501037_0350240 3300049573 Bacteria 1019
221 Ga0501037_0484358 3300049573 Bacteria 841
222 Ga0501038_0093169 3300049574 Bacteria 2521
223 Ga0501038_0094299 3300049574 Bacteria 2502
224 Ga0501038_0436274 3300049574 Bacteria 1009
225 Ga0501039_0007269 3300049575 Bacteria 8435
226 Ga0501039_0065914 3300049575 Bacteria 2810
227 Ga0501039_0991775 3300049575 Bacteria 653
228 Ga0501041_0030333 3300049577 Bacteria 3264
229 Ga0501041_0036078 3300049577 Bacteria 2996
230 Ga0501042_0054232 3300049578 Bacteria 2859
231 Ga0501043_0543118 3300049579 Bacteria 864
232 Ga0501046_0058609 3300049580 Bacteria 3018
233 Ga0501048_0199275 3300049582 Bacteria 1419
234 Ga0501048_0369891 3300049582 Bacteria 1023
235 Ga0501067_0025354 3300049583 Bacteria 3286
236 Ga0501069_0336176 3300049585 Bacteria 889
237 Ga0501070_0138482 3300049586 Bacteria 2010
238 Ga0501071_0120640 3300049587 Bacteria 1943
239 Ga0501071_0498592 3300049587 Bacteria 934
240 Ga0501072_0064299 3300049588 Bacteria 2893
241 Ga0501072_0249293 3300049588 Bacteria 1414
242 Ga0501073_0030988 3300049589 Bacteria 3817
243 Ga0501073_0289922 3300049589 Bacteria 1129
244 Ga0501073_0374105 3300049589 Bacteria 984
245 Ga0501073_0468382 3300049589 Bacteria 871
246 Ga0501074_0150581 3300049590 Bacteria 1663
247 Ga0501074_0212417 3300049590 Bacteria 1378
248 Ga0501075_0001423 3300049591 Bacteria 15561
249 Ga0501075_0015492 3300049591 Bacteria 5472
250 Ga0501075_0621511 3300049591 Bacteria 824
251 Ga0501076_0002106 3300049592 Bacteria 13647
252 Ga0501076_0002112 3300049592 Bacteria 13632
253 Ga0501076_0067943 3300049592 Bacteria 2847
254 Ga0501076_0644967 3300049592 Bacteria 874
255 Ga0501077_0458551 3300049593 Bacteria 816
256 Ga0501077_0460488 3300049593 Bacteria 814
257 Ga0501079_0003151 3300049741 Bacteria 12093
258 Ga0501079_0040247 3300049741 Bacteria 3605
259 Ga0501079_0737441 3300049741 Bacteria 775
260 Ga0501080_0000363 3300049742 Bacteria 35077
261 Ga0501081_0025314 3300049743 Bacteria 3991
262 Ga0501081_0206239 3300049743 Bacteria 1426
263 Ga0501081_0484847 3300049743 Bacteria 920
264 Ga0501081_1206234 3300049743 Bacteria 573
265 Ga0501083_0048356 3300049744 Bacteria 2871
266 Ga0501083_0301141 3300049744 Bacteria 1043
267 Ga0501035_0071002 3300049822 Bacteria 3084
268 Ga0501035_0249007 3300049822 Bacteria 1509
269 Ga0501035_0271657 3300049822 Bacteria 1435
270 Ga0501044_0077275 3300049823 Bacteria 3377
271 Ga0501045_0201662 3300049824 Bacteria 1482
272 nmdc:mga09592_726424_c1 3300050508 Bacteria 844
273 nmdc:mga08y16_1758_c1 3300050511 Bacteria 21960
274 nmdc:mga0n895_669013_c1 3300050512 Bacteria 1036
275 nmdc:mga0rr50_345198_c1 3300050513 Bacteria 1251
276 nmdc:mga08x19_8785_c1 3300050514 Bacteria 6028
277 nmdc:mga0a205_23717_c1 3300050515 Bacteria 5820
278 Ga0501084_0001907 3300054114 Bacteria 16638
279 Ga0501084_0525677 3300054114 Bacteria 1000
280 Ga0501084_0810879 3300054114 Bacteria 788
281 Ga0501084_1167470 3300054114 Bacteria 646
282 Ga0501082_0003131 3300060353 Bacteria 14430
283 Ga0501082_0009907 3300060353 Bacteria 8213
284 Ga0501082_0237006 3300060353 Bacteria 1588
285 Ga0501082_0335106 3300060353 Bacteria 1318
286 Ga0530510_0006416 3300061734 Bacteria 8194
287 Ga0530510_0089930 3300061734 Bacteria 2239
288 Ga0316579_10201461
289 Ga0068869_100439380
290 Ga0070680_100211173
291 Ga0070680_100846433
292 Ga0068868_100217374
293 Ga0068868_100511959
294 Ga0070689_100628042
295 Ga0070687_100443515
296 Ga0070675_100006112
297 Ga0070675_100351236
298 Ga0070674_100149558
299 Ga0070673_100247067
300 Ga0070659_100912919
301 Ga0070667_102162090
302 Ga0070713_101528155
303 Ga0070701_10011814
304 Ga0070700_100655100
305 Ga0070694_100088975
306 Ga0070662_101692908
307 Ga0070681_10010847
308 Ga0070685_10361817
309 Ga0070698_100800408
310 Ga0070679_100013271
311 Ga0068853_101235419
312 Ga0070672_100626235
313 Ga0070686_101226435
314 Ga0070693_100296317
315 Ga0070693_100685858
316 Ga0070665_101473933
317 Ga0070704_100055000
318 Ga0068857_100031764
319 Ga0068854_101217026
320 Ga0068859_100084082
321 Ga0068859_101631355
322 Ga0068864_101601486
323 Ga0068870_10243914
324 Ga0068863_101707893
325 Ga0068858_100047829
326 Ga0068858_100068788
327 Ga0070712_100858424
328 Ga0097621_100737742
329 Ga0075428_100021500
330 Ga0075428_100777956
331 Ga0075434_100117675
332 Ga0075434_100588813
333 Ga0075429_100848032
334 Ga0068865_100126323
335 Ga0075436_100076015
336 Ga0097620_100084082
337 Ga0097620_101632143
338 Ga0105240_11198210
339 Ga0111539_10005138
340 Ga0105245_10413910
341 Ga0105243_10487683
342 Ga0105243_11764297
343 Ga0105241_10378399
344 Ga0105242_10014096
345 Ga0105242_10346367
346 Ga0105242_10635351
347 Ga0105248_10182373
348 Ga0105238_10156985
349 Ga0105238_10232373
350 Ga0105030_100021
351 Ga0105239_11341593
352 Ga0157378_10788950
353 Ga0163162_10086622
354 Ga0157375_10411276
355 Ga0157380_10045405
356 Ga0157377_10187298
357 Ga0157379_10578563
358 Ga0163161_10446459
359 Ga0207697_10345209
360 Ga0207642_10808685
361 Ga0207645_10767377
362 Ga0207643_10059568
363 Ga0207654_10285019
364 Ga0207707_10015840
365 Ga0207663_10728705
366 Ga0207660_10065834
367 Ga0207662_10412596
368 Ga0207662_10551393
369 Ga0207652_10239180
370 Ga0207681_10377403
371 Ga0207694_10102101
372 Ga0207694_10245029
373 Ga0207659_10043471
374 Ga0207659_10144865
375 Ga0207659_10369435
376 Ga0207664_10401319
377 Ga0207686_10010191
378 Ga0207686_10505521
379 Ga0207670_10474847
380 Ga0207669_10098767
381 Ga0207691_10702763
382 Ga0207711_10496732
383 Ga0207651_10065280
384 Ga0207651_10220139
385 Ga0207658_11114560
386 Ga0207677_10124704
387 Ga0207703_10002767
388 Ga0207703_10395938
389 Ga0207708_10450025
390 Ga0207648_10033754
391 Ga0207648_10105479
392 Ga0207648_11323788
393 Ga0207674_10018545
394 Ga0207675_100923644
395 Ga0207683_10230856
396 Ga0209971_1017415
397 Ga0207428_10072750
398 Ga0307408_100010061
399 Ga0307408_100049047
400 Ga0316575_10050485
401 Ga0316579_10105734
402 Ga0316579_10234064
403 Ga0265314_10109775
404 Ga0316576_10095948
405 Ga0316576_10215020
406 Ga0316578_10009438
407 Ga0316578_10128911
408 Ga0316578_10319187
409 Ga0307405_10023101
410 Ga0307405_10067778
411 Ga0307405_10354408
412 Ga0316577_10007230
413 Ga0316577_10094916
414 Ga0307410_10005148
415 Ga0307406_10013992
416 Ga0307407_10430515
417 Ga0307407_10635336
418 Ga0307412_10019756
419 Ga0307409_100037675
420 Ga0307409_101055551
421 Ga0307416_100007155
422 Ga0307416_100015140
423 Ga0307416_100072866
424 Ga0307416_100821738
425 Ga0307416_102711508
426 Ga0307414_10020685
427 Ga0307411_10005403
428 Ga0307411_10043649
429 Ga0307411_10929112
430 Ga0307411_10993599
431 Ga0307415_100007944
432 Ga0307415_100529108
433 Ga0316583_10158514
434 Ga0316585_10007548
435 Ga0316580_10004451
436 Ga0316593_10032191
437 Ga0316593_10141555
438 Ga0316592_1012289
439 Ga0316592_1044690
440 Ga0316588_1001154
441 Ga0316588_1023737
442 Ga0316596_1050406
443 Ga0373938_0110756
444 Ga0373928_0170254
445 Ga0373929_0050240
446 Ga0373949_0206090
447 Ga0373943_0533427
448 Ga0316574_0043690
449 Ga0316574_0168746
450 Ga0316574_0198405
451 Ga0316574_0312929
452 Ga0316574_0360781
453 Ga0373927_0012176
454 Ga0316582_0003913
455 Ga0316582_0305390
456 Ga0316584_0009272
457 Ga0316584_0248296
458 Ga0316584_0378787
459 Ga0373925_0020384
460 Ga0373925_0312286
461 Ga0400487_22360
462 Ga0439438_126306
463 Ga0439447_045427
464 Ga0451800_0169867
465 Ga0451853_0613897
466 Ga0439441_006261
467 Ga0439442_033755
468 Ga0439443_003945
469 Ga0439450_039168
470 Ga0439451_061198
471 Ga0439454_001506
472 Ga0450911_032035
473 Ga0450919_007287
474 Ga0450920_001701
475 Ga0450920_001921
476 Ga0450921_000390
477 Ga0450921_004095
478 Ga0450923_000308
479 Ga0450923_019368
480 Ga0450894_001253
481 Ga0450895_004429
482 Ga0450896_001668
483 Ga0450896_009996
484 Ga0450899_013679
485 Ga0450899_031525
486 Ga0450906_006263
487 Ga0450910_006924
488 Ga0439446_0027315
489 Ga0439446_0027391
490 Ga0450908_001002
491 Ga0450908_003742
492 Ga0439434_0003774
493 Ga0439434_0089488
494 Ga0439435_0000095
495 Ga0439444_0002658
496 Ga0450918_003403
497 Ga0450918_006725
498 Ga0451576_0880332
499 Ga0495642_0113521
500 Ga0495647_0531438
501 Ga0495658_0189794
502 Ga0495672_0206365
503 Ga0501031_0120859
504 Ga0501032_0060101
505 Ga0501033_0062770
506 Ga0501036_0270547
507 Ga0501037_0350240
508 Ga0501037_0484358
509 Ga0501038_0093169
510 Ga0501038_0094299
511 Ga0501038_0436274
512 Ga0501039_0007269
513 Ga0501039_0065914
514 Ga0501039_0991775
515 Ga0501041_0030333
516 Ga0501041_0036078
517 Ga0501042_0054232
518 Ga0501043_0543118
519 Ga0501046_0058609
520 Ga0501048_0199275
521 Ga0501048_0369891
522 Ga0501067_0025354
523 Ga0501069_0336176
524 Ga0501070_0138482
525 Ga0501071_0120640
526 Ga0501071_0498592
527 Ga0501072_0064299
528 Ga0501072_0249293
529 Ga0501073_0030988
530 Ga0501073_0289922
531 Ga0501073_0374105
532 Ga0501073_0468382
533 Ga0501074_0150581
534 Ga0501074_0212417
535 Ga0501075_0001423
536 Ga0501075_0015492
537 Ga0501075_0621511
538 Ga0501076_0002106
539 Ga0501076_0002112
540 Ga0501076_0067943
541 Ga0501076_0644967
542 Ga0501077_0458551
543 Ga0501077_0460488
544 Ga0501079_0003151
545 Ga0501079_0040247
546 Ga0501079_0737441
547 Ga0501080_0000363
548 Ga0501081_0025314
549 Ga0501081_0206239
550 Ga0501081_0484847
551 Ga0501081_1206234
552 Ga0501083_0048356
553 Ga0501083_0301141
554 Ga0501035_0071002
555 Ga0501035_0249007
556 Ga0501035_0271657
557 Ga0501044_0077275
558 Ga0501045_0201662
559 nmdc:mga09592_726424_c1
560 nmdc:mga08y16_1758_c1
561 nmdc:mga0n895_669013_c1
562 nmdc:mga0rr50_345198_c1
563 nmdc:mga08x19_8785_c1
564 nmdc:mga0a205_23717_c1
565 Ga0501084_0001907
566 Ga0501084_0525677
567 Ga0501084_0810879
568 Ga0501084_1167470
569 Ga0501082_0003131
570 Ga0501082_0009907
571 Ga0501082_0237006
572 Ga0501082_0335106
573 Ga0530510_0006416
574 Ga0530510_0089930

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02130

YbeY

Endoribonuclease YbeY

17

163

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
1xm5-assembly1.cif.gz_A crystal structure of metal-dependent hydrolase ybey from e. coli, pfam upf0054 0.9381 2 137
1xm5-assembly1.cif.gz_A crystal structure of metal-dependent hydrolase ybey from e. coli, pfam upf0054 0.9248 2 137
1oz9-assembly1.cif.gz_A crystal structure of aq_1354, a hypothetical protein from aquifex aeolicus 0.8917 2 132
1oz9-assembly1.cif.gz_A crystal structure of aq_1354, a hypothetical protein from aquifex aeolicus 0.8491 2 132
7y7o-assembly1.cif.gz_A crystal structure of metallo-endoribonuclease ybey from staphylococcus aureus 0.8382 2 132
ID Description Score Start End Superfamily
af_P9WGX9_1_163_3.40.390.30 "Alpha Beta;3-Layer(aba) Sandwich;Collagenase (Catalytic Domain);Metalloproteases (""zincins""), catalytic domain" 0.9185 1 132 3.40.390.30
1oz9A00 "Alpha Beta;3-Layer(aba) Sandwich;Collagenase (Catalytic Domain);Metalloproteases (""zincins""), catalytic domain" 0.8917 2 132 3.40.390.30
af_Q2FY02_5_155_3.40.390.30 "Alpha Beta;3-Layer(aba) Sandwich;Collagenase (Catalytic Domain);Metalloproteases (""zincins""), catalytic domain" 0.8816 5 132 3.40.390.30
af_P9WGX9_1_163_3.40.390.30 "Alpha Beta;3-Layer(aba) Sandwich;Collagenase (Catalytic Domain);Metalloproteases (""zincins""), catalytic domain" 0.8803 1 132 3.40.390.30
af_Q4DNU0_12_187_3.40.390.30 "Alpha Beta;3-Layer(aba) Sandwich;Collagenase (Catalytic Domain);Metalloproteases (""zincins""), catalytic domain" 0.8773 18 132 3.40.390.30
ID Description Score Start End GO Terms
AF-A0A7S6MIW7-F1-model_v4 Endoribonuclease YbeY (EC 3.1.-.-) 0.9901 2 137 GO:0004222
GO:0004521
GO:0005737
GO:0006364
GO:0008270
AF-A0A2T5JJR4-F1-model_v4 Endoribonuclease YbeY (EC 3.1.-.-) 0.9878 2 137 GO:0004222
GO:0004521
GO:0005737
GO:0006364
GO:0008270
AF-A0A2R5FHG6-F1-model_v4 Endoribonuclease YbeY (EC 3.1.-.-) 0.9853 2 137 GO:0004222
GO:0004521
GO:0005737
GO:0006364
GO:0008270
AF-A0A1F3X332-F1-model_v4 Endoribonuclease YbeY (EC 3.1.-.-) 0.9837 2 137 GO:0004222
GO:0004521
GO:0005737
GO:0006364
GO:0008270
AF-A0A4Y1YP26-F1-model_v4 Endoribonuclease YbeY (EC 3.1.-.-) 0.9836 2 137 GO:0004222
GO:0004521
GO:0005737
GO:0006364
GO:0008270

Map