F387698

General Info

Members Datasets Scaffolds Average Seq Length
286 159 572 277

Family's Representative Sequence

Representative Sequence 3300050512|nmdc:mga0n895_86970_c1|nmdc:mga0n895_86970_c1_488_1384
Length 298
Sequence VSTIDPSSGPIQFGEKMNTMHIDQTQLDQYRDNGFLVLEGLADPAACDRLRARAEELVQEFDPAEVVSIFSTREQNRLTDEYFLTSGDKIRFFFEENAFNADGTLKYAKEKSINKIGHALHDLDPLFDRFSRNDNVKALAQAIGLEKPLLVQSMYIFKQPNIGGEVTCHQDSTFIYTEPIDIAGLWFALEDATIENGCLWAIPGGHRHGLKSRWRRTNEGRMEFETYSSEPWPESELVPLEVAKGSLILLHGLLPHRSFENRSSRSRHAYTLHLIGRDAKYPTDNWLQRPVNKPFRSF

Samples

Sample ID Description Type Environment
1 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
2 3300000532 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNA_Illumina_Assembled Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
6 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
7 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
8 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
9 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
10 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
11 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
12 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
13 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
14 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
15 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
16 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
17 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
18 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
19 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
20 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
21 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
22 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
23 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
24 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
25 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
26 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
27 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
28 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
29 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
30 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
31 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
32 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
33 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
34 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
35 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
36 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
37 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
38 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
39 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
40 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
41 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
42 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
43 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
44 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
45 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
46 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
47 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
48 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
49 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
50 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
51 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
52 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
53 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
54 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
55 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
56 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
57 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
58 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
59 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
60 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
61 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
62 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
63 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
64 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
65 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
66 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
67 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
68 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
69 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
70 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
71 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
72 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
73 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
74 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
75 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
76 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
77 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
78 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
79 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
80 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
81 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
82 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
83 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
84 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
85 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
86 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
87 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
88 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
89 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
90 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
125 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
126 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
128 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
129 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
130 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
131 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
132 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
133 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
134 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
135 3300038699 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot26 Metagenome Rhizosphere
136 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
137 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
138 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
139 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
140 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
141 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
142 3300049515 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F22_B_5_drought Metagenome Rhizosphere
143 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
144 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049663 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_A_2_drought Metagenome Rhizosphere
146 3300049672 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought Metagenome Rhizosphere
147 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
148 3300049680 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_B_3_drought Metagenome Rhizosphere
149 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
150 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
151 3300049707 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_B_2_drought Metagenome Rhizosphere
152 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
153 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
154 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
155 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
156 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
157 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
158 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
159 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 1.4
Rhizosphere 97.9
Stem 0
Stem Tuber 0
Unclassified 16.78

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga0n895_86970_c1 3300050512 Bacteria 3122
2 CNAas_1001664 3300000532 Bacteria 1802
3 JGI24751J29686_10000059 3300002459 Bacteria 61971
4 JGI25406J46586_10002059 3300003203 Bacteria 9498
5 rootL2_10174567 3300003322 Unclassified 1376
6 Ga0065714_10006812 3300005288 Bacteria 3557
7 Ga0065704_10210965 3300005289 Bacteria 1106
8 Ga0065712_10023508 3300005290 Bacteria 1240
9 Ga0065712_10104646 3300005290 Bacteria 1956
10 Ga0065715_10010673 3300005293 Bacteria 4054
11 Ga0065707_10122606 3300005295 Bacteria 2084
12 Ga0065707_10143364 3300005295 Bacteria 1736
13 Ga0070690_100375163 3300005330 Bacteria 1038
14 Ga0070670_100000345 3300005331 Bacteria 39001
15 Ga0070670_100033803 3300005331 Unclassified 4403
16 Ga0070670_100113763 3300005331 Bacteria 2333
17 Ga0070670_100243779 3300005331 Bacteria 1565
18 Ga0068869_100042979 3300005334 Bacteria 3243
19 Ga0068869_100070990 3300005334 Unclassified 2578
20 Ga0068869_100214523 3300005334 Bacteria 1523
21 Ga0068869_100267002 3300005334 Bacteria 1372
22 Ga0070666_10096674 3300005335 Bacteria 2033
23 Ga0070682_100000765 3300005337 Bacteria 19038
24 Ga0068868_100083277 3300005338 Bacteria 2567
25 Ga0068868_100128997 3300005338 Unclassified 2068
26 Ga0070689_100000147 3300005340 Bacteria 40915
27 Ga0070689_100160708 3300005340 Bacteria 1816
28 Ga0070689_100187506 3300005340 Bacteria 1683
29 Ga0070689_100605978 3300005340 Unclassified 949
30 Ga0070687_100004807 3300005343 Bacteria 5408
31 Ga0070692_10022950 3300005345 Bacteria 3054
32 Ga0070692_10134288 3300005345 Unclassified 1394
33 Ga0070675_100105704 3300005354 Bacteria 2375
34 Ga0070675_100641569 3300005354 Bacteria 965
35 Ga0070671_100037770 3300005355 Bacteria 4006
36 Ga0070673_100083868 3300005364 Bacteria 2590
37 Ga0070688_100008852 3300005365 Bacteria 5479
38 Ga0070667_100149047 3300005367 Bacteria 2054
39 Ga0070703_10002834 3300005406 Unclassified 4967
40 Ga0070701_10003840 3300005438 Bacteria 6001
41 Ga0070705_100001165 3300005440 Bacteria 14401
42 Ga0070705_100182333 3300005440 Bacteria 1423
43 Ga0070700_100009439 3300005441 Bacteria 5355
44 Ga0070700_100090485 3300005441 Bacteria 1996
45 Ga0070694_100163072 3300005444 Bacteria 1637
46 Ga0070694_100463847 3300005444 Bacteria 1002
47 Ga0070678_100342971 3300005456 Bacteria 1282
48 Ga0070662_100121469 3300005457 Bacteria 2003
49 Ga0070681_10089584 3300005458 Bacteria 3028
50 Ga0068867_100146673 3300005459 Bacteria 1850
51 Ga0068867_100462714 3300005459 Unclassified 1083
52 Ga0070685_10012679 3300005466 Bacteria 4433
53 Ga0070706_100000661 3300005467 Bacteria 39338
54 Ga0070706_100300813 3300005467 Archaea 1497
55 Ga0070699_100104516 3300005518 Bacteria 2483
56 Ga0070697_100180719 3300005536 Bacteria 1788
57 Ga0068853_100078674 3300005539 Bacteria 2882
58 Ga0070672_100533576 3300005543 Bacteria 1017
59 Ga0070686_100038285 3300005544 Bacteria 2980
60 Ga0070695_100020633 3300005545 Bacteria 4024
61 Ga0070696_100010980 3300005546 Bacteria 6065
62 Ga0070696_100233803 3300005546 Bacteria 1384
63 Ga0070693_100029830 3300005547 Unclassified 2977
64 Ga0070704_100134900 3300005549 Bacteria 1919
65 Ga0070704_100152720 3300005549 Bacteria 1817
66 Ga0070704_100373563 3300005549 Bacteria 1209
67 Ga0070664_100084711 3300005564 Bacteria 2737
68 Ga0068854_100054612 3300005578 Bacteria 2874
69 Ga0070702_100027608 3300005615 Unclassified 3065
70 Ga0070702_100037060 3300005615 Bacteria 2706
71 Ga0070702_100062468 3300005615 Bacteria 2172
72 Ga0068859_100017220 3300005617 Bacteria 7256
73 Ga0068859_100021702 3300005617 Bacteria 6443
74 Ga0068859_100022971 3300005617 Bacteria 6255
75 Ga0068859_100040324 3300005617 Bacteria 4686
76 Ga0068859_100194361 3300005617 Bacteria 2113
77 Ga0068859_100266608 3300005617 Unclassified 1804
78 Ga0068859_100294191 3300005617 Bacteria 1717
79 Ga0068859_100369136 3300005617 Bacteria 1530
80 Ga0068859_100385588 3300005617 Bacteria 1497
81 Ga0068859_100746716 3300005617 Bacteria 1067
82 Ga0068864_100153622 3300005618 Bacteria 2087
83 Ga0068864_100258612 3300005618 Unclassified 1619
84 Ga0068864_100359337 3300005618 Bacteria 1376
85 Ga0068861_100005391 3300005719 Bacteria 8654
86 Ga0068861_100025852 3300005719 Bacteria 4263
87 Ga0068861_100236735 3300005719 Bacteria 1551
88 Ga0068861_100506279 3300005719 Bacteria 1092
89 Ga0068870_10007037 3300005840 Unclassified 4995
90 Ga0068863_100011034 3300005841 Bacteria 8764
91 Ga0068863_100346220 3300005841 Bacteria 1446
92 Ga0068858_100094390 3300005842 Unclassified 2786
93 Ga0068858_100278510 3300005842 Bacteria 1592
94 Ga0068858_100499175 3300005842 Bacteria 1175
95 Ga0068858_100815095 3300005842 Unclassified 911
96 Ga0068860_100117982 3300005843 Bacteria 2539
97 Ga0068860_100295202 3300005843 Bacteria 1587
98 Ga0068862_100090374 3300005844 Unclassified 2666
99 Ga0068862_100768406 3300005844 Unclassified 939
100 Ga0081540_1030074 3300005983 Bacteria 3014
101 Ga0081539_10001477 3300005985 Bacteria 39895
102 Ga0097621_100021159 3300006237 Bacteria 5024
103 Ga0097621_100144449 3300006237 Unclassified 2036
104 Ga0068871_100059013 3300006358 Bacteria 3125
105 Ga0075430_100002209 3300006846 Bacteria 16133
106 Ga0075431_100101144 3300006847 Bacteria 2974
107 Ga0075433_10009207 3300006852 Bacteria 7892
108 Ga0075433_10041932 3300006852 Unclassified 3968
109 Ga0075433_10048514 3300006852 Unclassified 3692
110 Ga0075434_100292422 3300006871 Unclassified 1649
111 Ga0075434_100492379 3300006871 Bacteria 1247
112 Ga0075429_100016441 3300006880 Bacteria 6411
113 Ga0075429_100167020 3300006880 Bacteria 1927
114 Ga0075429_100247917 3300006880 Bacteria 1559
115 Ga0068865_100276362 3300006881 Unclassified 1336
116 Ga0075436_100016355 3300006914 Bacteria 5078
117 Ga0097620_100017221 3300006931 Bacteria 7256
118 Ga0097620_100021702 3300006931 Bacteria 6443
119 Ga0097620_100022972 3300006931 Bacteria 6255
120 Ga0097620_100040324 3300006931 Bacteria 4686
121 Ga0097620_100194342 3300006931 Bacteria 2113
122 Ga0097620_100266606 3300006931 Unclassified 1804
123 Ga0097620_100294175 3300006931 Bacteria 1717
124 Ga0097620_100369126 3300006931 Bacteria 1530
125 Ga0097620_100385554 3300006931 Bacteria 1497
126 Ga0097620_100746723 3300006931 Bacteria 1067
127 Ga0111539_10008996 3300009094 Bacteria 12641
128 Ga0111539_10072243 3300009094 Bacteria 4070
129 Ga0105245_10105219 3300009098 Bacteria 2617
130 Ga0105247_10000669 3300009101 Bacteria 27007
131 Ga0105247_10027616 3300009101 Bacteria 3431
132 Ga0105247_10184716 3300009101 Bacteria 1393
133 Ga0114129_10014562 3300009147 Bacteria 11208
134 Ga0114129_10393921 3300009147 Bacteria 1826
135 Ga0105243_10207848 3300009148 Bacteria 1721
136 Ga0105243_10273086 3300009148 Bacteria 1519
137 Ga0105241_10003083 3300009174 Bacteria 12421
138 Ga0105241_10074461 3300009174 Unclassified 2644
139 Ga0105241_10120217 3300009174 Bacteria 2114
140 Ga0105241_10151613 3300009174 Unclassified 1897
141 Ga0105242_10009810 3300009176 Bacteria 7339
142 Ga0105248_10001318 3300009177 Bacteria 27655
143 Ga0105248_10015110 3300009177 Bacteria 8502
144 Ga0105248_10035141 3300009177 Bacteria 5607
145 Ga0105248_10290535 3300009177 Bacteria 1841
146 Ga0105248_10303375 3300009177 Unclassified 1798
147 Ga0105248_10603919 3300009177 Bacteria 1238
148 Ga0105237_10157507 3300009545 Bacteria 2268
149 Ga0105238_10004606 3300009551 Bacteria 13641
150 Ga0105249_10006809 3300009553 Bacteria 9964
151 Ga0105249_10122629 3300009553 Bacteria 2472
152 Ga0105249_10498124 3300009553 Bacteria 1263
153 Ga0105239_10811113 3300010375 Unclassified 1072
154 Ga0105246_10004330 3300011119 Bacteria 8634
155 Ga0105246_10073863 3300011119 Bacteria 2408
156 Ga0157373_10002869 3300013100 Bacteria 13044
157 Ga0157373_10017937 3300013100 Bacteria 5153
158 Ga0157373_10084566 3300013100 Bacteria 2236
159 Ga0163162_10068886 3300013306 Unclassified 3590
160 Ga0163162_10088327 3300013306 Unclassified 3179
161 Ga0163162_10549860 3300013306 Unclassified 1283
162 Ga0163162_10702144 3300013306 Bacteria 1133
163 Ga0157375_10312232 3300013308 Bacteria 1736
164 Ga0163163_10000504 3300014325 Bacteria 35124
165 Ga0163163_10180492 3300014325 Bacteria 2158
166 Ga0163163_10183731 3300014325 Bacteria 2138
167 Ga0163163_10191226 3300014325 Bacteria 2095
168 Ga0163163_10652563 3300014325 Bacteria 1116
169 Ga0157380_10082086 3300014326 Bacteria 2638
170 Ga0157380_10241366 3300014326 Bacteria 1629
171 Ga0157380_10535566 3300014326 Unclassified 1145
172 Ga0157377_10053369 3300014745 Unclassified 2285
173 Ga0157379_10337379 3300014968 Bacteria 1378
174 Ga0157379_10678257 3300014968 Bacteria 966
175 Ga0157376_10089582 3300014969 Bacteria 2660
176 Ga0163161_10034772 3300017792 Bacteria 3605
177 Ga0163161_10558200 3300017792 Bacteria 939
178 Ga0207653_10001322 3300025885 Bacteria 8053
179 Ga0207710_10000436 3300025900 Bacteria 27277
180 Ga0207680_10066003 3300025903 Bacteria 2224
181 Ga0207643_10002706 3300025908 Bacteria 9579
182 Ga0207643_10010313 3300025908 Bacteria 5029
183 Ga0207643_10132215 3300025908 Unclassified 1486
184 Ga0207684_10000085 3300025910 Bacteria 175922
185 Ga0207684_10050868 3300025910 Bacteria 3515
186 Ga0207654_10067475 3300025911 Unclassified 2113
187 Ga0207707_10227170 3300025912 Bacteria 1624
188 Ga0207671_10107555 3300025914 Bacteria 2119
189 Ga0207660_10130983 3300025917 Bacteria 1909
190 Ga0207662_10009725 3300025918 Bacteria 5302
191 Ga0207662_10097171 3300025918 Bacteria 1821
192 Ga0207681_10004982 3300025923 Bacteria 8161
193 Ga0207681_10146877 3300025923 Unclassified 1763
194 Ga0207694_10011102 3300025924 Bacteria 6803
195 Ga0207650_10000011 3300025925 Bacteria 450115
196 Ga0207650_10066145 3300025925 Bacteria 2710
197 Ga0207650_10186641 3300025925 Bacteria 1655
198 Ga0207659_10127408 3300025926 Bacteria 1960
199 Ga0207659_10362157 3300025926 Bacteria 1205
200 Ga0207659_10383699 3300025926 Bacteria 1172
201 Ga0207687_10352243 3300025927 Bacteria 1200
202 Ga0207706_10071753 3300025933 Bacteria 3046
203 Ga0207706_10154500 3300025933 Bacteria 2018
204 Ga0207686_10018795 3300025934 Unclassified 3918
205 Ga0207686_10082918 3300025934 Bacteria 2097
206 Ga0207709_10017103 3300025935 Bacteria 4042
207 Ga0207709_10071793 3300025935 Bacteria 2200
208 Ga0207670_10001045 3300025936 Bacteria 14622
209 Ga0207670_10274635 3300025936 Bacteria 1311
210 Ga0207670_10307588 3300025936 Bacteria 1243
211 Ga0207704_10235697 3300025938 Bacteria 1364
212 Ga0207665_10245646 3300025939 Unclassified 1320
213 Ga0207711_10037063 3300025941 Unclassified 4140
214 Ga0207711_10069536 3300025941 Bacteria 3052
215 Ga0207711_10243787 3300025941 Unclassified 1648
216 Ga0207689_10010375 3300025942 Bacteria 8027
217 Ga0207689_10051679 3300025942 Bacteria 3388
218 Ga0207679_10315580 3300025945 Bacteria 1352
219 Ga0207712_10005413 3300025961 Bacteria 8055
220 Ga0207712_10137063 3300025961 Bacteria 1873
221 Ga0207640_10106860 3300025981 Bacteria 1975
222 Ga0207658_10210518 3300025986 Bacteria 1629
223 Ga0207677_10167535 3300026023 Bacteria 1714
224 Ga0207703_10076098 3300026035 Bacteria 2783
225 Ga0207703_10114826 3300026035 Unclassified 2303
226 Ga0207703_10212503 3300026035 Bacteria 1725
227 Ga0207708_10010397 3300026075 Bacteria 6908
228 Ga0207708_10029944 3300026075 Bacteria 4127
229 Ga0207708_10373994 3300026075 Bacteria 1173
230 Ga0207641_10041148 3300026088 Plasmid 3872
231 Ga0207648_10016127 3300026089 Bacteria 6840
232 Ga0207648_10142838 3300026089 Bacteria 2110
233 Ga0207648_10242234 3300026089 Unclassified 1606
234 Ga0207648_10399255 3300026089 Unclassified 1246
235 Ga0207676_10001966 3300026095 Bacteria 14971
236 Ga0207676_10005374 3300026095 Bacteria 9074
237 Ga0207676_10240907 3300026095 Bacteria 1622
238 Ga0207676_10242463 3300026095 Bacteria 1618
239 Ga0207674_10469494 3300026116 Bacteria 1216
240 Ga0207674_10577509 3300026116 Bacteria 1086
241 Ga0207675_100059547 3300026118 Bacteria 3563
242 Ga0207675_100126787 3300026118 Bacteria 2418
243 Ga0207675_100205570 3300026118 Bacteria 1892
244 Ga0207683_10416130 3300026121 Bacteria 1237
245 Ga0207698_10023882 3300026142 Unclassified 4280
246 Ga0268265_10030952 3300028380 Bacteria 3861
247 Ga0268265_10081835 3300028380 Unclassified 2551
248 Ga0268264_10009854 3300028381 Bacteria 7907
249 Ga0268264_10071633 3300028381 Bacteria 2937
250 Ga0268264_10314201 3300028381 Bacteria 1479
251 Ga0307513_10233446 3300031456 Bacteria 1651
252 Ga0307408_100058582 3300031548 Bacteria 2801
253 Ga0307405_10448930 3300031731 Bacteria 1022
254 Ga0307405_10455418 3300031731 Bacteria 1015
255 Ga0307413_10149009 3300031824 Bacteria 1628
256 Ga0307416_100153620 3300032002 Bacteria 2115
257 Ga0373951_0001968 3300035091 Bacteria 5275
258 Ga0242422_04409 3300038699 Bacteria 886
259 Ga0242420_013234 3300038996 Bacteria 1404
260 Ga0439455_0006742 3300042012 Unclassified 2399
261 Ga0439458_0033511 3300042157 Unclassified 1230
262 Ga0496106_0018541 3300048909 Bacteria 5148
263 Ga0496106_0031003 3300048909 Bacteria 3986
264 Ga0496112_0321046 3300048915 Bacteria 1493
265 Ga0496113_0422598 3300048916 Bacteria 1071
266 Ga0501292_003407 3300049515 Bacteria 2124
267 Ga0501298_007962 3300049521 Bacteria 1770
268 Ga0501038_0032832 3300049574 Bacteria 4575
269 Ga0501223_003111 3300049663 Bacteria 3626
270 Ga0501239_003214 3300049672 Bacteria 1540
271 Ga0501249_048198 3300049679 Bacteria 975
272 Ga0501250_025497 3300049680 Bacteria 793
273 Ga0501261_017171 3300049690 Bacteria 1010
274 Ga0501225_0014865 3300049705 Bacteria 2171
275 Ga0501234_003691 3300049707 Bacteria 2407
276 Ga0501283_015230 3300049779 Bacteria 1182
277 nmdc:mga05p37_836969_c1 3300050507 Bacteria 1001
278 nmdc:mga09592_36568_c1 3300050508 Bacteria 4113
279 nmdc:mga0qj67_20599_c1 3300050509 Bacteria 5052
280 nmdc:mga08y16_4374_c1 3300050511 Bacteria 14764
281 nmdc:mga0n895_22065_c1 3300050512 Bacteria 5965
282 nmdc:mga0n895_389616_c1 3300050512 Unclassified 1409
283 nmdc:mga08x19_3562_c1 3300050514 Bacteria 9267
284 nmdc:mga0a205_279075_c1 3300050515 Bacteria 1546
285 nmdc:mga0a205_52445_c1 3300050515 Unclassified 3936
286 Ga0530510_0070864 3300061734 Bacteria 2530
287 nmdc:mga0n895_86970_c1
288 CNAas_1001664
289 JGI24751J29686_10000059
290 JGI25406J46586_10002059
291 rootL2_10174567
292 Ga0065714_10006812
293 Ga0065704_10210965
294 Ga0065712_10023508
295 Ga0065712_10104646
296 Ga0065715_10010673
297 Ga0065707_10122606
298 Ga0065707_10143364
299 Ga0070690_100375163
300 Ga0070670_100000345
301 Ga0070670_100033803
302 Ga0070670_100113763
303 Ga0070670_100243779
304 Ga0068869_100042979
305 Ga0068869_100070990
306 Ga0068869_100214523
307 Ga0068869_100267002
308 Ga0070666_10096674
309 Ga0070682_100000765
310 Ga0068868_100083277
311 Ga0068868_100128997
312 Ga0070689_100000147
313 Ga0070689_100160708
314 Ga0070689_100187506
315 Ga0070689_100605978
316 Ga0070687_100004807
317 Ga0070692_10022950
318 Ga0070692_10134288
319 Ga0070675_100105704
320 Ga0070675_100641569
321 Ga0070671_100037770
322 Ga0070673_100083868
323 Ga0070688_100008852
324 Ga0070667_100149047
325 Ga0070703_10002834
326 Ga0070701_10003840
327 Ga0070705_100001165
328 Ga0070705_100182333
329 Ga0070700_100009439
330 Ga0070700_100090485
331 Ga0070694_100163072
332 Ga0070694_100463847
333 Ga0070678_100342971
334 Ga0070662_100121469
335 Ga0070681_10089584
336 Ga0068867_100146673
337 Ga0068867_100462714
338 Ga0070685_10012679
339 Ga0070706_100000661
340 Ga0070706_100300813
341 Ga0070699_100104516
342 Ga0070697_100180719
343 Ga0068853_100078674
344 Ga0070672_100533576
345 Ga0070686_100038285
346 Ga0070695_100020633
347 Ga0070696_100010980
348 Ga0070696_100233803
349 Ga0070693_100029830
350 Ga0070704_100134900
351 Ga0070704_100152720
352 Ga0070704_100373563
353 Ga0070664_100084711
354 Ga0068854_100054612
355 Ga0070702_100027608
356 Ga0070702_100037060
357 Ga0070702_100062468
358 Ga0068859_100017220
359 Ga0068859_100021702
360 Ga0068859_100022971
361 Ga0068859_100040324
362 Ga0068859_100194361
363 Ga0068859_100266608
364 Ga0068859_100294191
365 Ga0068859_100369136
366 Ga0068859_100385588
367 Ga0068859_100746716
368 Ga0068864_100153622
369 Ga0068864_100258612
370 Ga0068864_100359337
371 Ga0068861_100005391
372 Ga0068861_100025852
373 Ga0068861_100236735
374 Ga0068861_100506279
375 Ga0068870_10007037
376 Ga0068863_100011034
377 Ga0068863_100346220
378 Ga0068858_100094390
379 Ga0068858_100278510
380 Ga0068858_100499175
381 Ga0068858_100815095
382 Ga0068860_100117982
383 Ga0068860_100295202
384 Ga0068862_100090374
385 Ga0068862_100768406
386 Ga0081540_1030074
387 Ga0081539_10001477
388 Ga0097621_100021159
389 Ga0097621_100144449
390 Ga0068871_100059013
391 Ga0075430_100002209
392 Ga0075431_100101144
393 Ga0075433_10009207
394 Ga0075433_10041932
395 Ga0075433_10048514
396 Ga0075434_100292422
397 Ga0075434_100492379
398 Ga0075429_100016441
399 Ga0075429_100167020
400 Ga0075429_100247917
401 Ga0068865_100276362
402 Ga0075436_100016355
403 Ga0097620_100017221
404 Ga0097620_100021702
405 Ga0097620_100022972
406 Ga0097620_100040324
407 Ga0097620_100194342
408 Ga0097620_100266606
409 Ga0097620_100294175
410 Ga0097620_100369126
411 Ga0097620_100385554
412 Ga0097620_100746723
413 Ga0111539_10008996
414 Ga0111539_10072243
415 Ga0105245_10105219
416 Ga0105247_10000669
417 Ga0105247_10027616
418 Ga0105247_10184716
419 Ga0114129_10014562
420 Ga0114129_10393921
421 Ga0105243_10207848
422 Ga0105243_10273086
423 Ga0105241_10003083
424 Ga0105241_10074461
425 Ga0105241_10120217
426 Ga0105241_10151613
427 Ga0105242_10009810
428 Ga0105248_10001318
429 Ga0105248_10015110
430 Ga0105248_10035141
431 Ga0105248_10290535
432 Ga0105248_10303375
433 Ga0105248_10603919
434 Ga0105237_10157507
435 Ga0105238_10004606
436 Ga0105249_10006809
437 Ga0105249_10122629
438 Ga0105249_10498124
439 Ga0105239_10811113
440 Ga0105246_10004330
441 Ga0105246_10073863
442 Ga0157373_10002869
443 Ga0157373_10017937
444 Ga0157373_10084566
445 Ga0163162_10068886
446 Ga0163162_10088327
447 Ga0163162_10549860
448 Ga0163162_10702144
449 Ga0157375_10312232
450 Ga0163163_10000504
451 Ga0163163_10180492
452 Ga0163163_10183731
453 Ga0163163_10191226
454 Ga0163163_10652563
455 Ga0157380_10082086
456 Ga0157380_10241366
457 Ga0157380_10535566
458 Ga0157377_10053369
459 Ga0157379_10337379
460 Ga0157379_10678257
461 Ga0157376_10089582
462 Ga0163161_10034772
463 Ga0163161_10558200
464 Ga0207653_10001322
465 Ga0207710_10000436
466 Ga0207680_10066003
467 Ga0207643_10002706
468 Ga0207643_10010313
469 Ga0207643_10132215
470 Ga0207684_10000085
471 Ga0207684_10050868
472 Ga0207654_10067475
473 Ga0207707_10227170
474 Ga0207671_10107555
475 Ga0207660_10130983
476 Ga0207662_10009725
477 Ga0207662_10097171
478 Ga0207681_10004982
479 Ga0207681_10146877
480 Ga0207694_10011102
481 Ga0207650_10000011
482 Ga0207650_10066145
483 Ga0207650_10186641
484 Ga0207659_10127408
485 Ga0207659_10362157
486 Ga0207659_10383699
487 Ga0207687_10352243
488 Ga0207706_10071753
489 Ga0207706_10154500
490 Ga0207686_10018795
491 Ga0207686_10082918
492 Ga0207709_10017103
493 Ga0207709_10071793
494 Ga0207670_10001045
495 Ga0207670_10274635
496 Ga0207670_10307588
497 Ga0207704_10235697
498 Ga0207665_10245646
499 Ga0207711_10037063
500 Ga0207711_10069536
501 Ga0207711_10243787
502 Ga0207689_10010375
503 Ga0207689_10051679
504 Ga0207679_10315580
505 Ga0207712_10005413
506 Ga0207712_10137063
507 Ga0207640_10106860
508 Ga0207658_10210518
509 Ga0207677_10167535
510 Ga0207703_10076098
511 Ga0207703_10114826
512 Ga0207703_10212503
513 Ga0207708_10010397
514 Ga0207708_10029944
515 Ga0207708_10373994
516 Ga0207641_10041148
517 Ga0207648_10016127
518 Ga0207648_10142838
519 Ga0207648_10242234
520 Ga0207648_10399255
521 Ga0207676_10001966
522 Ga0207676_10005374
523 Ga0207676_10240907
524 Ga0207676_10242463
525 Ga0207674_10469494
526 Ga0207674_10577509
527 Ga0207675_100059547
528 Ga0207675_100126787
529 Ga0207675_100205570
530 Ga0207683_10416130
531 Ga0207698_10023882
532 Ga0268265_10030952
533 Ga0268265_10081835
534 Ga0268264_10009854
535 Ga0268264_10071633
536 Ga0268264_10314201
537 Ga0307513_10233446
538 Ga0307408_100058582
539 Ga0307405_10448930
540 Ga0307405_10455418
541 Ga0307413_10149009
542 Ga0307416_100153620
543 Ga0373951_0001968
544 Ga0242422_04409
545 Ga0242420_013234
546 Ga0439455_0006742
547 Ga0439458_0033511
548 Ga0496106_0018541
549 Ga0496106_0031003
550 Ga0496112_0321046
551 Ga0496113_0422598
552 Ga0501292_003407
553 Ga0501298_007962
554 Ga0501038_0032832
555 Ga0501223_003111
556 Ga0501239_003214
557 Ga0501249_048198
558 Ga0501250_025497
559 Ga0501261_017171
560 Ga0501225_0014865
561 Ga0501234_003691
562 Ga0501283_015230
563 nmdc:mga05p37_836969_c1
564 nmdc:mga09592_36568_c1
565 nmdc:mga0qj67_20599_c1
566 nmdc:mga08y16_4374_c1
567 nmdc:mga0n895_22065_c1
568 nmdc:mga0n895_389616_c1
569 nmdc:mga08x19_3562_c1
570 nmdc:mga0a205_279075_c1
571 nmdc:mga0a205_52445_c1
572 Ga0530510_0070864

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF05721

PhyH

Phytanoyl-CoA dioxygenase (PhyH)

30

269

0.89

Structural Annotation

Top 5 Hits

ID Description Score Start End
2opw-assembly1.cif.gz_A crystal structure of human phytanoyl-coa dioxygenase phyhd1 (apo) 0.9145 1 277
3obz-assembly1.cif.gz_A crystal structure of human phytanoyl-coa dioxygenase phyhd1 2-oxoglutarate and iron complex 0.9109 1 277
2opw-assembly1.cif.gz_A crystal structure of human phytanoyl-coa dioxygenase phyhd1 (apo) 0.9082 1 277
3obz-assembly1.cif.gz_A crystal structure of human phytanoyl-coa dioxygenase phyhd1 2-oxoglutarate and iron complex 0.9046 1 277
2a1x-assembly1.cif.gz_A human phytanoyl-coa 2-hydroxylase in complex with iron and 2-oxoglutarate 0.8238 2 260
ID Description Score Start End Superfamily
af_A0A1D6Q4J3_1_128_2.60.120.620 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.9502 134 257 2.60.120.620
af_A0A1R3PPE3_1_147_2.60.120.620 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.9379 134 272 2.60.120.620
af_Q9ZVF6_4_280_2.60.120.620 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.9295 1 274 2.60.120.620
af_Q9NAM7_3_287_2.60.120.620 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.9283 5 277 2.60.120.620
af_Q9VGY8_1_285_2.60.120.620 Mainly Beta;Sandwich;Jelly Rolls;q2cbj1_9rhob like domain 0.9242 5 277 2.60.120.620
ID Description Score Start End GO Terms
AF-A0A3B0SK24-F1-model_v4 Phytanoyl-CoA dioxygenase 0.974 103 276 GO:0016706
AF-A0A7C7S3L8-F1-model_v4 Phytanoyl-CoA dioxygenase family protein 0.9738 67 278 GO:0005506
GO:0016706
AF-A0A354FML7-F1-model_v4 Phytanoyl-CoA dioxygenase 0.9693 129 278 GO:0005506
GO:0016706
AF-A0A7C7S3L8-F1-model_v4 Phytanoyl-CoA dioxygenase family protein 0.9693 67 278 GO:0005506
GO:0016706
AF-A0A3B0SK24-F1-model_v4 Phytanoyl-CoA dioxygenase 0.9631 103 276 GO:0016706

Map