F387429

General Info

Members Datasets Scaffolds Average Seq Length
286 200 572 118

Family's Representative Sequence

Representative Sequence 3300014497|Ga0182008_10172405|Ga0182008_101724051
Length 142
Sequence VPQHTEHPNTSIPVAWVTCGTSEEIIMANVIDALAAATLRDDIPAFRPGDNLKVHVKVVEGNRSRLQVFQGVCIRIQGSGVGRTFTVRKVSFGVGVERTFPLHTPIIDHIEVVTRGDVRRAKLYYLRNLRGKAAKIKERREA

Samples

Sample ID Description Type Environment
1 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
2 3300003575 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_25 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
3 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
4 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
5 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
10 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
15 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
16 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
17 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
18 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
19 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
20 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
21 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
22 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
23 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
24 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
25 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
26 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
27 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
28 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
29 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
30 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
31 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
32 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
33 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
34 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
35 3300012475 Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.10.old.080610 Metagenome Rhizosphere
36 3300012502 Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610 Metagenome Rhizosphere
37 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
38 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
39 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
40 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
41 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
42 3300020070 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
43 3300020075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
44 3300020076 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3) (version 3) Metatranscriptome Rhizosphere
45 3300020078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
46 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
47 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
48 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
49 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
50 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
51 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
52 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
53 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
54 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
55 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
56 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
65 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
67 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
71 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
73 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
74 3300031592 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRA4 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
75 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
76 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
77 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
78 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
79 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
80 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
81 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
82 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
83 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
84 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
85 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
86 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
87 3300032133 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JBrBrA Metagenome Rhizosphere
88 3300032168 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
89 3300033529 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
90 3300034816 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_3 Metagenome Rhizosphere
91 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
92 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
93 3300035121 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_3 Metagenome Rhizosphere
94 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
95 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
96 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
97 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
98 3300036242 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRI5 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
99 3300036458 Metatranscriptome of spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE2 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
100 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
101 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
102 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
103 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
104 3300041441 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_1 MetaG Metagenome Rhizoplane
105 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
106 3300041444 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaT Metatranscriptome Rhizoplane
107 3300041451 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_3 MetaG Metagenome Rhizoplane
108 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
109 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
110 3300041486 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_9 MetaG Metagenome Rhizoplane
111 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
112 3300041496 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_4 MetaG Metagenome Unclassified
113 3300041498 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_5 MetaG Metagenome Unclassified
114 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
115 3300041509 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_6 MetaG Metagenome Unclassified
116 3300041511 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_12 MetaG Metagenome Unclassified
117 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
118 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
119 3300042185 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0515W_E14_080116_2592 Metagenome Rhizosphere
120 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
121 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
122 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
123 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
124 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
125 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
126 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
127 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
128 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
129 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
130 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
131 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
132 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
133 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
134 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
135 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
136 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
137 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
138 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
139 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
140 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
141 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
142 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
143 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
144 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
145 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
146 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
147 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
148 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
149 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
150 3300049162 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
151 3300049527 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
152 3300049529 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_A_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
153 3300049530 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
154 3300049532 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
155 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
156 3300049536 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_A_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
157 3300049537 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B12_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
158 3300049540 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
159 3300049541 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_A_4_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
160 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
161 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
164 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
165 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
166 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
168 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
169 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
170 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
171 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
172 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
173 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
174 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
175 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
176 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
177 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
179 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
180 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
181 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
182 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
183 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
184 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
185 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
186 3300059492 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 14R_AD_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
187 3300059493 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 19R_SW_T1_R2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
188 3300059504 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 23R_SD_T1_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
189 3300059505 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 24R_SD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
190 3300059510 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 55R_CD_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
191 3300059511 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 56R_CD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
192 3300059513 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 59R_AW_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
193 3300059604 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 63R_AD_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
194 3300059605 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 71R_SD_T2_R3 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
195 3300059644 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 38R_AD_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
196 3300059647 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 43R_SW_T1_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
197 3300059652 Metatranscriptome of rhizosphere soil microbial communities from Hall's panicgrass in greenhouse, Berkeley, CA, USA - 72R_SD_T2_R4 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
198 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
199 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
200 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 78.32
Metatranscriptomes 21.68
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.15
Nodule 0
Rhizoplane 7.69
Rhizosphere 82.52
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0182008_10172405 3300014497 Bacteria 1092
2 Ga0007409J51694_1031629 3300003575 Bacteria 835
3 Ga0007409J51694_1115287 3300003575 Bacteria 536
4 Ga0058860_12208547 3300004801 Bacteria 590
5 Ga0058862_12296117 3300004803 Bacteria 586
6 Ga0070658_10264344 3300005327 Bacteria 1462
7 Ga0070683_101069852 3300005329 Bacteria 775
8 Ga0070683_102329162 3300005329 Bacteria 514
9 Ga0070670_100806125 3300005331 Bacteria 848
10 Ga0070682_100339149 3300005337 Bacteria 1117
11 Ga0070682_100725293 3300005337 Bacteria 800
12 Ga0070687_100085372 3300005343 Bacteria 1732
13 Ga0070692_10467506 3300005345 Bacteria 811
14 Ga0070674_101206282 3300005356 Bacteria 672
15 Ga0070674_101373566 3300005356 Bacteria 632
16 Ga0070673_101228076 3300005364 Bacteria 703
17 Ga0070714_100062167 3300005435 Bacteria 3209
18 Ga0070678_100191434 3300005456 Bacteria 1682
19 Ga0068853_100507830 3300005539 Bacteria 1139
20 Ga0070672_100694484 3300005543 Bacteria 891
21 Ga0070672_101306336 3300005543 Bacteria 648
22 Ga0070686_100000094 3300005544 Bacteria 61903
23 Ga0070665_100001155 3300005548 Bacteria 32424
24 Ga0070664_100518479 3300005564 Bacteria 1100
25 Ga0068854_100416714 3300005578 Bacteria 1115
26 Ga0068854_101203874 3300005578 Bacteria 679
27 Ga0068852_101228035 3300005616 Bacteria 771
28 Ga0068866_10682137 3300005718 Bacteria 703
29 Ga0068870_11057147 3300005840 Bacteria 582
30 Ga0075365_10219780 3300006038 Bacteria 1333
31 Ga0075368_10117657 3300006042 Bacteria 1099
32 Ga0075367_10055903 3300006178 Bacteria 2343
33 Ga0075370_10091987 3300006353 Bacteria 1750
34 Ga0068865_100366235 3300006881 Bacteria 1172
35 Ga0105243_10320299 3300009148 Bacteria 1412
36 Ga0105243_10328747 3300009148 Bacteria 1396
37 Ga0105241_10854751 3300009174 Bacteria 842
38 Ga0105237_11650252 3300009545 Bacteria 648
39 Ga0105238_10000452 3300009551 Bacteria 43023
40 Ga0105238_10343860 3300009551 Bacteria 1480
41 Ga0105238_10919754 3300009551 Bacteria 894
42 Ga0105238_12051849 3300009551 Bacteria 606
43 Ga0105249_12998209 3300009553 Bacteria 542
44 Ga0105246_11190329 3300011119 Bacteria 701
45 Ga0157317_1015007 3300012475 Bacteria 640
46 Ga0157347_1019108 3300012502 Bacteria 789
47 Ga0157372_10139488 3300013307 Bacteria 2792
48 Ga0157372_11078225 3300013307 Bacteria 929
49 Ga0157372_12004625 3300013307 Bacteria 665
50 Ga0163163_11296805 3300014325 Bacteria 790
51 Ga0163163_11684446 3300014325 Bacteria 695
52 Ga0182008_10011342 3300014497 Bacteria 4744
53 Ga0157377_10439918 3300014745 Bacteria 898
54 Ga0157379_11126028 3300014968 Bacteria 752
55 Ga0163161_10509958 3300017792 Bacteria 981
56 Ga0206356_10808069 3300020070 Bacteria 746
57 Ga0206349_1012927 3300020075 Bacteria 572
58 Ga0206349_1178804 3300020075 Bacteria 556
59 Ga0206349_1372542 3300020075 Bacteria 685
60 Ga0206355_1448851 3300020076 Bacteria 672
61 Ga0206352_10200359 3300020078 Bacteria 542
62 Ga0206352_10291261 3300020078 Bacteria 810
63 Ga0206354_10059230 3300020081 Bacteria 869
64 Ga0206354_10147216 3300020081 Bacteria 812
65 Ga0206354_10618486 3300020081 Bacteria 590
66 Ga0206354_10718009 3300020081 Bacteria 740
67 Ga0206354_11303109 3300020081 Bacteria 756
68 Ga0206353_10656579 3300020082 Bacteria 1076
69 Ga0206353_10783919 3300020082 Bacteria 967
70 Ga0206353_11132833 3300020082 Bacteria 701
71 Ga0154015_1001874 3300020610 Bacteria 610
72 Ga0154015_1474219 3300020610 Bacteria 513
73 Ga0213875_10289671 3300021388 Bacteria 774
74 Ga0224712_10559790 3300022467 Bacteria 556
75 Ga0207688_10107448 3300025901 Bacteria 1617
76 Ga0207662_10015927 3300025918 Bacteria 4236
77 Ga0207694_10000117 3300025924 Bacteria 84322
78 Ga0207694_10222524 3300025924 Bacteria 1540
79 Ga0207650_10735874 3300025925 Bacteria 834
80 Ga0207659_10973754 3300025926 Bacteria 730
81 Ga0207664_10019345 3300025929 Bacteria 5031
82 Ga0207709_10249589 3300025935 Bacteria 1295
83 Ga0207709_11187038 3300025935 Bacteria 628
84 Ga0207670_10156079 3300025936 Bacteria 1699
85 Ga0207669_10300482 3300025937 Bacteria 1220
86 Ga0207704_10126117 3300025938 Bacteria 1763
87 Ga0207691_10967126 3300025940 Bacteria 711
88 Ga0207668_10200523 3300025972 Bacteria 1589
89 Ga0207640_10216534 3300025981 Bacteria 1463
90 Ga0207640_11148249 3300025981 Bacteria 689
91 Ga0207677_11420618 3300026023 Bacteria 639
92 Ga0207678_10200458 3300026067 Bacteria 1706
93 Ga0207678_10627934 3300026067 Bacteria 943
94 Ga0207674_10435041 3300026116 Bacteria 1268
95 Ga0207675_101291493 3300026118 Bacteria 750
96 Ga0207683_10231501 3300026121 Bacteria 1685
97 Ga0207698_10597656 3300026142 Bacteria 1087
98 Ga0209813_10068797 3300027866 Bacteria 1147
99 Ga0268266_10001699 3300028379 Bacteria 25235
100 Ga0307515_10073544 3300028794 Bacteria 4591
101 Ga0307408_100767661 3300031548 Bacteria 872
102 Ga0310117_126711 3300031592 Bacteria 564
103 Ga0307514_10048495 3300031649 Bacteria 3308
104 Ga0307514_10114911 3300031649 Bacteria 1896
105 Ga0316576_10000390 3300031727 Bacteria 20161
106 Ga0316576_10034846 3300031727 Bacteria 3590
107 Ga0316578_10021391 3300031728 Bacteria 3589
108 Ga0307405_10290012 3300031731 Bacteria 1236
109 Ga0307413_10223109 3300031824 Bacteria 1378
110 Ga0307413_11326010 3300031824 Bacteria 630
111 Ga0307410_10261379 3300031852 Bacteria 1350
112 Ga0307406_10502919 3300031901 Bacteria 983
113 Ga0307407_11019321 3300031903 Bacteria 640
114 Ga0307407_11286912 3300031903 Bacteria 573
115 Ga0307416_100589050 3300032002 Bacteria 1190
116 Ga0307414_10690621 3300032004 Bacteria 923
117 Ga0307411_10052211 3300032005 Bacteria 2672
118 Ga0307415_100158073 3300032126 Bacteria 1753
119 Ga0316583_10161085 3300032133 Bacteria 781
120 Ga0316593_10046976 3300032168 Bacteria 1451
121 Ga0316593_10136967 3300032168 Bacteria 886
122 Ga0316593_10289212 3300032168 Bacteria 619
123 Ga0316593_10331164 3300032168 Bacteria 580
124 Ga0316587_1070082 3300033529 Bacteria 656
125 Ga0373930_0084848 3300034816 Bacteria 736
126 Ga0373959_0000121 3300034820 Bacteria 17060
127 Ga0373944_0018328 3300035089 Bacteria 1998
128 Ga0373960_0267669 3300035121 Bacteria 626
129 Ga0373946_0061772 3300035171 Bacteria 1596
130 Ga0316574_0982659 3300035398 Bacteria 508
131 Ga0373927_0039721 3300035695 Bacteria 3054
132 Ga0373947_0195042 3300035725 Bacteria 1323
133 Ga0310104_12769 3300036242 Bacteria 667
134 Ga0310112_061633 3300036458 Bacteria 507
135 Ga0316584_0098465 3300036712 Bacteria 2189
136 Ga0316584_0620700 3300036712 Bacteria 748
137 Ga0373925_0332189 3300037068 Bacteria 1231
138 Ga0439453_0051730 3300041408 Bacteria 832
139 Ga0439466_0073594 3300041411 Bacteria 1085
140 Ga0451787_077458 3300041441 Bacteria 915
141 Ga0451789_0078497 3300041443 Bacteria 1232
142 Ga0451790_26628 3300041444 Bacteria 571
143 Ga0451791_0083242 3300041451 Bacteria 2512
144 Ga0451797_0948530 3300041453 Bacteria 612
145 Ga0451802_0764583 3300041460 Bacteria 649
146 Ga0451802_1318904 3300041460 Bacteria 530
147 Ga0451807_1194759 3300041486 Bacteria 547
148 Ga0451837_0204941 3300041494 Bacteria 729
149 Ga0451839_0205818 3300041496 Bacteria 636
150 Ga0451841_1033912 3300041498 Bacteria 1165
151 Ga0451849_1557804 3300041505 Bacteria 675
152 Ga0451843_1424543 3300041509 Bacteria 911
153 Ga0451855_1507225 3300041511 Bacteria 3197
154 Ga0451853_0549443 3300041512 Bacteria 530
155 Ga0450920_128319 3300042122 Bacteria 534
156 Ga0450909_013830 3300042185 Bacteria 1188
157 Ga0466972_0042424 3300044658 Bacteria 2212
158 Ga0466965_0024223 3300044683 Bacteria 2934
159 Ga0466965_0165359 3300044683 Bacteria 1161
160 Ga0466966_0208941 3300044684 Bacteria 1180
161 Ga0466966_0343221 3300044684 Bacteria 897
162 Ga0466961_0044881 3300044693 Bacteria 2828
163 Ga0466961_0593727 3300044693 Bacteria 666
164 Ga0466963_0098158 3300044694 Bacteria 2002
165 Ga0466963_0166838 3300044694 Bacteria 1534
166 Ga0466963_0295024 3300044694 Bacteria 1140
167 Ga0466964_0084660 3300044706 Bacteria 1368
168 Ga0466964_0182031 3300044706 Bacteria 997
169 Ga0466971_0002276 3300044719 Bacteria 8137
170 Ga0466970_0117250 3300044765 Bacteria 1456
171 Ga0466970_0488398 3300044765 Bacteria 708
172 Ga0466957_0004970 3300044842 Bacteria 7438
173 Ga0466957_0038028 3300044842 Bacteria 2899
174 Ga0466957_0068240 3300044842 Bacteria 2195
175 Ga0466957_1126531 3300044842 Bacteria 566
176 Ga0466960_0151704 3300044901 Bacteria 1238
177 Ga0466960_0384791 3300044901 Bacteria 806
178 Ga0466958_0086139 3300045836 Bacteria 1938
179 Ga0466967_0071783 3300045976 Bacteria 3101
180 Ga0466967_0113422 3300045976 Bacteria 2493
181 Ga0466967_0126563 3300045976 Bacteria 2367
182 Ga0466967_0143511 3300045976 Bacteria 2225
183 Ga0466967_0217907 3300045976 Bacteria 1813
184 Ga0466967_0306713 3300045976 Bacteria 1528
185 Ga0466967_1832796 3300045976 Bacteria 604
186 Ga0495641_0232718 3300046461 Bacteria 827
187 Ga0495594_0564255 3300046499 Bacteria 646
188 Ga0495669_0023101 3300046684 Bacteria 2705
189 Ga0495613_0532900 3300046689 Bacteria 788
190 Ga0495600_0393695 3300046809 Bacteria 863
191 Ga0495676_0591916 3300047321 Bacteria 723
192 Ga0495680_0260048 3300047322 Bacteria 1228
193 Ga0496102_0469775 3300048905 Bacteria 1179
194 Ga0496104_0104496 3300048907 Bacteria 2714
195 Ga0496104_1022207 3300048907 Bacteria 730
196 Ga0496105_0044370 3300048908 Bacteria 3667
197 Ga0496108_0363364 3300048911 Bacteria 1264
198 Ga0496108_1384147 3300048911 Bacteria 589
199 Ga0496108_1552061 3300048911 Bacteria 549
200 Ga0496109_0030858 3300048912 Bacteria 4805
201 Ga0496109_0134655 3300048912 Bacteria 2308
202 Ga0496109_1391823 3300048912 Bacteria 637
203 Ga0496110_0002133 3300048913 Bacteria 14776
204 Ga0496110_1359524 3300048913 Bacteria 620
205 Ga0496111_0005087 3300048914 Bacteria 8367
206 Ga0496114_0523222 3300048917 Bacteria 1049
207 Ga0496123_0047681 3300048926 Bacteria 2891
208 Ga0496124_0117438 3300048927 Bacteria 2131
209 Ga0496124_0240663 3300048927 Bacteria 1346
210 Ga0496126_0516189 3300048929 Bacteria 953
211 Ga0501307_037608 3300049162 Bacteria 693
212 Ga0501311_040187 3300049527 Bacteria 707
213 Ga0501311_043580 3300049527 Bacteria 686
214 Ga0501313_046042 3300049529 Bacteria 595
215 Ga0501313_064161 3300049529 Bacteria 524
216 Ga0501314_037488 3300049530 Bacteria 557
217 Ga0501314_040897 3300049530 Bacteria 540
218 Ga0501316_048699 3300049532 Bacteria 606
219 Ga0501316_059559 3300049532 Bacteria 563
220 Ga0501318_064293 3300049534 Bacteria 569
221 Ga0501320_056403 3300049536 Bacteria 545
222 Ga0501321_005050 3300049537 Bacteria 1289
223 Ga0501321_040447 3300049537 Bacteria 654
224 Ga0501324_021711 3300049540 Bacteria 660
225 Ga0501324_047419 3300049540 Bacteria 502
226 Ga0501325_007195 3300049541 Bacteria 936
227 Ga0501032_0556166 3300049569 Bacteria 731
228 Ga0501036_0421576 3300049572 Bacteria 1113
229 Ga0501037_0148847 3300049573 Bacteria 1674
230 Ga0501039_0015115 3300049575 Bacteria 5906
231 Ga0501039_0304943 3300049575 Bacteria 1252
232 Ga0501040_0151688 3300049576 Bacteria 1635
233 Ga0501040_1330238 3300049576 Bacteria 521
234 Ga0501042_0001973 3300049578 Bacteria 12360
235 Ga0501042_0053448 3300049578 Bacteria 2882
236 Ga0501047_0548358 3300049581 Bacteria 981
237 Ga0501048_0082646 3300049582 Bacteria 2266
238 Ga0501048_1283332 3300049582 Bacteria 526
239 Ga0501068_0681820 3300049584 Bacteria 672
240 Ga0501069_0091379 3300049585 Bacteria 1722
241 Ga0501069_0205444 3300049585 Bacteria 1142
242 Ga0501070_0113605 3300049586 Bacteria 2238
243 Ga0501071_0395927 3300049587 Bacteria 1054
244 Ga0501072_0639610 3300049588 Bacteria 838
245 Ga0501072_1099262 3300049588 Bacteria 619
246 Ga0501075_0298760 3300049591 Bacteria 1227
247 Ga0501075_1052819 3300049591 Bacteria 618
248 Ga0501079_0013008 3300049741 Bacteria 6348
249 Ga0501079_0370544 3300049741 Bacteria 1123
250 Ga0501079_1367283 3300049741 Bacteria 557
251 Ga0501080_0011786 3300049742 Bacteria 8011
252 Ga0501080_0027510 3300049742 Bacteria 5288
253 Ga0501080_0253577 3300049742 Bacteria 1604
254 Ga0501035_0972964 3300049822 Bacteria 669
255 Ga0501044_0441429 3300049823 Bacteria 1209
256 Ga0501045_0197528 3300049824 Bacteria 1499
257 Ga0501045_0292182 3300049824 Bacteria 1213
258 Ga0501045_0390915 3300049824 Bacteria 1035
259 nmdc:mga00v17_427_c1 3300050491 Bacteria 19744
260 nmdc:mga0yw44_127613_c1 3300050492 Bacteria 1644
261 nmdc:mga0yw44_173282_c1 3300050492 Bacteria 1418
262 nmdc:mga06r32_117_c5 3300050510 Bacteria 10449
263 Ga0495612_0199773 3300053078 Bacteria 882
264 Ga0495619_0409088 3300053085 Bacteria 936
265 Ga0500616_0150310 3300053153 Bacteria 1079
266 Ga0501084_0630588 3300054114 Bacteria 905
267 Ga0501084_1825836 3300054114 Bacteria 507
268 Ga0587073_0086021 3300059492 Bacteria 790
269 Ga0587077_069088 3300059493 Bacteria 785
270 Ga0587077_225073 3300059493 Bacteria 531
271 Ga0587082_148260 3300059504 Bacteria 553
272 Ga0587083_0093640 3300059505 Bacteria 737
273 Ga0587090_053075 3300059510 Bacteria 748
274 Ga0587091_102076 3300059511 Bacteria 674
275 Ga0587091_208441 3300059511 Bacteria 528
276 Ga0587094_093780 3300059513 Bacteria 571
277 Ga0587098_081579 3300059604 Bacteria 539
278 Ga0587106_148693 3300059605 Bacteria 519
279 Ga0587075_110373 3300059644 Bacteria 559
280 Ga0587075_148478 3300059644 Bacteria 506
281 Ga0587079_185395 3300059647 Bacteria 559
282 Ga0587107_152194 3300059652 Bacteria 503
283 Ga0501082_1675499 3300060353 Bacteria 555
284 Ga0466962_0003253 3300061719 Bacteria 7717
285 Ga0530510_0059743 3300061734 Bacteria 2758
286 Ga0530510_1302827 3300061734 Bacteria 557
287 Ga0182008_10172405
288 Ga0007409J51694_1031629
289 Ga0007409J51694_1115287
290 Ga0058860_12208547
291 Ga0058862_12296117
292 Ga0070658_10264344
293 Ga0070683_101069852
294 Ga0070683_102329162
295 Ga0070670_100806125
296 Ga0070682_100339149
297 Ga0070682_100725293
298 Ga0070687_100085372
299 Ga0070692_10467506
300 Ga0070674_101206282
301 Ga0070674_101373566
302 Ga0070673_101228076
303 Ga0070714_100062167
304 Ga0070678_100191434
305 Ga0068853_100507830
306 Ga0070672_100694484
307 Ga0070672_101306336
308 Ga0070686_100000094
309 Ga0070665_100001155
310 Ga0070664_100518479
311 Ga0068854_100416714
312 Ga0068854_101203874
313 Ga0068852_101228035
314 Ga0068866_10682137
315 Ga0068870_11057147
316 Ga0075365_10219780
317 Ga0075368_10117657
318 Ga0075367_10055903
319 Ga0075370_10091987
320 Ga0068865_100366235
321 Ga0105243_10320299
322 Ga0105243_10328747
323 Ga0105241_10854751
324 Ga0105237_11650252
325 Ga0105238_10000452
326 Ga0105238_10343860
327 Ga0105238_10919754
328 Ga0105238_12051849
329 Ga0105249_12998209
330 Ga0105246_11190329
331 Ga0157317_1015007
332 Ga0157347_1019108
333 Ga0157372_10139488
334 Ga0157372_11078225
335 Ga0157372_12004625
336 Ga0163163_11296805
337 Ga0163163_11684446
338 Ga0182008_10011342
339 Ga0157377_10439918
340 Ga0157379_11126028
341 Ga0163161_10509958
342 Ga0206356_10808069
343 Ga0206349_1012927
344 Ga0206349_1178804
345 Ga0206349_1372542
346 Ga0206355_1448851
347 Ga0206352_10200359
348 Ga0206352_10291261
349 Ga0206354_10059230
350 Ga0206354_10147216
351 Ga0206354_10618486
352 Ga0206354_10718009
353 Ga0206354_11303109
354 Ga0206353_10656579
355 Ga0206353_10783919
356 Ga0206353_11132833
357 Ga0154015_1001874
358 Ga0154015_1474219
359 Ga0213875_10289671
360 Ga0224712_10559790
361 Ga0207688_10107448
362 Ga0207662_10015927
363 Ga0207694_10000117
364 Ga0207694_10222524
365 Ga0207650_10735874
366 Ga0207659_10973754
367 Ga0207664_10019345
368 Ga0207709_10249589
369 Ga0207709_11187038
370 Ga0207670_10156079
371 Ga0207669_10300482
372 Ga0207704_10126117
373 Ga0207691_10967126
374 Ga0207668_10200523
375 Ga0207640_10216534
376 Ga0207640_11148249
377 Ga0207677_11420618
378 Ga0207678_10200458
379 Ga0207678_10627934
380 Ga0207674_10435041
381 Ga0207675_101291493
382 Ga0207683_10231501
383 Ga0207698_10597656
384 Ga0209813_10068797
385 Ga0268266_10001699
386 Ga0307515_10073544
387 Ga0307408_100767661
388 Ga0310117_126711
389 Ga0307514_10048495
390 Ga0307514_10114911
391 Ga0316576_10000390
392 Ga0316576_10034846
393 Ga0316578_10021391
394 Ga0307405_10290012
395 Ga0307413_10223109
396 Ga0307413_11326010
397 Ga0307410_10261379
398 Ga0307406_10502919
399 Ga0307407_11019321
400 Ga0307407_11286912
401 Ga0307416_100589050
402 Ga0307414_10690621
403 Ga0307411_10052211
404 Ga0307415_100158073
405 Ga0316583_10161085
406 Ga0316593_10046976
407 Ga0316593_10136967
408 Ga0316593_10289212
409 Ga0316593_10331164
410 Ga0316587_1070082
411 Ga0373930_0084848
412 Ga0373959_0000121
413 Ga0373944_0018328
414 Ga0373960_0267669
415 Ga0373946_0061772
416 Ga0316574_0982659
417 Ga0373927_0039721
418 Ga0373947_0195042
419 Ga0310104_12769
420 Ga0310112_061633
421 Ga0316584_0098465
422 Ga0316584_0620700
423 Ga0373925_0332189
424 Ga0439453_0051730
425 Ga0439466_0073594
426 Ga0451787_077458
427 Ga0451789_0078497
428 Ga0451790_26628
429 Ga0451791_0083242
430 Ga0451797_0948530
431 Ga0451802_0764583
432 Ga0451802_1318904
433 Ga0451807_1194759
434 Ga0451837_0204941
435 Ga0451839_0205818
436 Ga0451841_1033912
437 Ga0451849_1557804
438 Ga0451843_1424543
439 Ga0451855_1507225
440 Ga0451853_0549443
441 Ga0450920_128319
442 Ga0450909_013830
443 Ga0466972_0042424
444 Ga0466965_0024223
445 Ga0466965_0165359
446 Ga0466966_0208941
447 Ga0466966_0343221
448 Ga0466961_0044881
449 Ga0466961_0593727
450 Ga0466963_0098158
451 Ga0466963_0166838
452 Ga0466963_0295024
453 Ga0466964_0084660
454 Ga0466964_0182031
455 Ga0466971_0002276
456 Ga0466970_0117250
457 Ga0466970_0488398
458 Ga0466957_0004970
459 Ga0466957_0038028
460 Ga0466957_0068240
461 Ga0466957_1126531
462 Ga0466960_0151704
463 Ga0466960_0384791
464 Ga0466958_0086139
465 Ga0466967_0071783
466 Ga0466967_0113422
467 Ga0466967_0126563
468 Ga0466967_0143511
469 Ga0466967_0217907
470 Ga0466967_0306713
471 Ga0466967_1832796
472 Ga0495641_0232718
473 Ga0495594_0564255
474 Ga0495669_0023101
475 Ga0495613_0532900
476 Ga0495600_0393695
477 Ga0495676_0591916
478 Ga0495680_0260048
479 Ga0496102_0469775
480 Ga0496104_0104496
481 Ga0496104_1022207
482 Ga0496105_0044370
483 Ga0496108_0363364
484 Ga0496108_1384147
485 Ga0496108_1552061
486 Ga0496109_0030858
487 Ga0496109_0134655
488 Ga0496109_1391823
489 Ga0496110_0002133
490 Ga0496110_1359524
491 Ga0496111_0005087
492 Ga0496114_0523222
493 Ga0496123_0047681
494 Ga0496124_0117438
495 Ga0496124_0240663
496 Ga0496126_0516189
497 Ga0501307_037608
498 Ga0501311_040187
499 Ga0501311_043580
500 Ga0501313_046042
501 Ga0501313_064161
502 Ga0501314_037488
503 Ga0501314_040897
504 Ga0501316_048699
505 Ga0501316_059559
506 Ga0501318_064293
507 Ga0501320_056403
508 Ga0501321_005050
509 Ga0501321_040447
510 Ga0501324_021711
511 Ga0501324_047419
512 Ga0501325_007195
513 Ga0501032_0556166
514 Ga0501036_0421576
515 Ga0501037_0148847
516 Ga0501039_0015115
517 Ga0501039_0304943
518 Ga0501040_0151688
519 Ga0501040_1330238
520 Ga0501042_0001973
521 Ga0501042_0053448
522 Ga0501047_0548358
523 Ga0501048_0082646
524 Ga0501048_1283332
525 Ga0501068_0681820
526 Ga0501069_0091379
527 Ga0501069_0205444
528 Ga0501070_0113605
529 Ga0501071_0395927
530 Ga0501072_0639610
531 Ga0501072_1099262
532 Ga0501075_0298760
533 Ga0501075_1052819
534 Ga0501079_0013008
535 Ga0501079_0370544
536 Ga0501079_1367283
537 Ga0501080_0011786
538 Ga0501080_0027510
539 Ga0501080_0253577
540 Ga0501035_0972964
541 Ga0501044_0441429
542 Ga0501045_0197528
543 Ga0501045_0292182
544 Ga0501045_0390915
545 nmdc:mga00v17_427_c1
546 nmdc:mga0yw44_127613_c1
547 nmdc:mga0yw44_173282_c1
548 nmdc:mga06r32_117_c5
549 Ga0495612_0199773
550 Ga0495619_0409088
551 Ga0500616_0150310
552 Ga0501084_0630588
553 Ga0501084_1825836
554 Ga0587073_0086021
555 Ga0587077_069088
556 Ga0587077_225073
557 Ga0587082_148260
558 Ga0587083_0093640
559 Ga0587090_053075
560 Ga0587091_102076
561 Ga0587091_208441
562 Ga0587094_093780
563 Ga0587098_081579
564 Ga0587106_148693
565 Ga0587075_110373
566 Ga0587075_148478
567 Ga0587079_185395
568 Ga0587107_152194
569 Ga0501082_1675499
570 Ga0466962_0003253
571 Ga0530510_0059743
572 Ga0530510_1302827

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01245

Ribosomal_L19

Ribosomal protein L19

29

139

0.98

Structural Annotation

Top 5 Hits

ID Description Score Start End
6sj6-assembly1.cif.gz_S cryo-em structure of 50s-rsfs complex from staphylococcus aureus 0.8885 2 100
6ppf-assembly1.cif.gz_P bacterial 45srbga ribosomal particle class b 0.8776 3 104
5dm7-assembly1.cif.gz_M crystal structure of the 50s ribosomal subunit from deinococcus radiodurans in complex with hygromycin a 0.8759 2 101
6gsk-assembly1.cif.gz_B8 structure of t. thermophilus 70s ribosome complex with mrna, trnafmet and near-cognate trnathr in the a-site 0.8676 2 103
6pvk-assembly1.cif.gz_P bacterial 45srbga ribosomal particle class a 0.8645 3 104
ID Description Score Start End Superfamily
af_Q7ZW47_303_388_3.30.160.20 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain; 0.9252 46 75 3.30.160.20
af_Q9VRL8_239_320_3.30.160.20 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain; 0.8906 46 75 3.30.160.20
af_P97473_17_105_3.30.160.20 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain; 0.8757 47 75 3.30.160.20
af_Q96SI9_372_467_3.30.160.20 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain; 0.8667 47 75 3.30.160.20
af_A0A2R8Q731_63_142_3.30.160.20 Alpha Beta;2-Layer Sandwich;Double Stranded RNA Binding Domain; 0.8557 47 74 3.30.160.20
ID Description Score Start End GO Terms
AF-A0A7W0HFS8-F1-model_v4 50S ribosomal protein L19 0.9584 7 94 GO:0003735
GO:0006412
GO:0022625
AF-A0A519BJM2-F1-model_v4 50S ribosomal protein L19 0.9574 11 94 GO:0003735
GO:0006412
GO:0022625
AF-A0A1Q7S5A4-F1-model_v4 50S ribosomal protein L19 0.9571 1 91 GO:0003735
GO:0006412
GO:0022625
AF-A0A354LU83-F1-model_v4 deleted 0.9533 2 91
AF-A0A7X7G057-F1-model_v4 50S ribosomal protein L19 0.9506 2 91 GO:0003735
GO:0006412
GO:0022625

Map