F386456

General Info

Members Datasets Scaffolds Average Seq Length
284 199 568 171

Family's Representative Sequence

Representative Sequence 3300050508|nmdc:mga09592_15584_c1|nmdc:mga09592_15584_c1_4945_5577
Length 210
Sequence MAGAPPGVNRAGRPRRSSTSVREWRRAREARLVPWYESVMANPTATFDTSLGSFSAEIYLDKMPVTAGNFIKLAKSGFYDGLHFHRVIKDFMIQFGCPHSKDPSDPRAGTGDSPYGRIKDEHPPQHKLSNEPGTLSMANTGRPDSGGCQFFINSVHNAYLDWFTPGPSKHPVFGKITSGMDVVQKIERTPTSKDRPTTPVKMNKVTIQGA

Samples

Sample ID Description Type Environment
1 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
2 3300004800 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
3 3300004801 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) Metatranscriptome Unclassified
4 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
5 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
6 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
7 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
8 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
11 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
12 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
13 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
14 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
15 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
16 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
17 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
18 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
19 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
23 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
24 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
25 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
26 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
27 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
28 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
33 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
34 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
35 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
36 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
37 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
38 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
39 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
40 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
41 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
42 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
45 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
46 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
47 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
48 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
49 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
51 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
52 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
53 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
54 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
55 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
56 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
57 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
60 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
61 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
62 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
98 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
99 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
100 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
101 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
102 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
103 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
104 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
105 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
106 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
107 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
108 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
109 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
110 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
111 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
112 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
113 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
114 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
115 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
116 3300032137 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SCrBrC Metagenome Rhizosphere
117 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
118 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
119 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
120 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
121 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
122 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
123 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
124 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
125 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
126 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
127 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
128 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
129 3300038727 Seagrass microbial communities from Seahorse Key, FL, USA - TV0818 Metagenome Unclassified
130 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
131 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
132 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
133 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
134 3300041458 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_10 MetaG Metagenome Rhizoplane
135 3300041505 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_9 MetaG Metagenome Unclassified
136 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
137 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
138 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
139 3300046471 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co3_9_34 rhizosphere Metagenome Rhizosphere
140 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
141 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
142 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
143 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
144 3300049130 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J3_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
145 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
146 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
147 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
148 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
151 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
153 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
154 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
155 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
156 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
157 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
158 3300049660 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D2_B_0_control Metagenome Rhizosphere
159 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
160 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
161 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
162 3300049670 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought Metagenome Rhizosphere
163 3300049705 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_A_2_drought Metagenome Rhizosphere
164 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
165 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
166 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
167 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
168 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
169 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
170 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
171 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
172 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
173 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
174 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
175 3300053080 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 endosphere Metagenome Endosphere
176 3300053086 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 endosphere Metagenome Endosphere
177 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
178 3300053091 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 endosphere Metagenome Endosphere
179 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
180 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
181 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
182 3300053102 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 endosphere Metagenome Endosphere
183 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
184 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
185 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
186 3300053121 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 endosphere Metagenome Endosphere
187 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
188 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
189 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
190 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
191 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
192 3300053138 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 endosphere Metagenome Endosphere
193 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
194 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
195 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
196 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
197 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
198 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
199 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.94
Metatranscriptomes 1.06
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 13.03
Nodule 0
Rhizoplane 1.41
Rhizosphere 79.23
Stem 0
Stem Tuber 0
Unclassified 6.34

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 nmdc:mga09592_15584_c1 3300050508 Bacteria 6211
2 Ga0058861_11824186 3300004800 Bacteria 542
3 Ga0058860_12162812 3300004801 Bacteria 737
4 Ga0070690_100040523 3300005330 Bacteria 2946
5 Ga0070690_100092846 3300005330 Bacteria 1990
6 Ga0070670_100336578 3300005331 Bacteria 1324
7 Ga0070670_100648582 3300005331 Bacteria 947
8 Ga0070682_100014136 3300005337 Bacteria 4610
9 Ga0068868_100005520 3300005338 Bacteria 8893
10 Ga0068868_100298088 3300005338 Bacteria 1369
11 Ga0070689_100006317 3300005340 Bacteria 8185
12 Ga0070689_100040101 3300005340 Bacteria 3588
13 Ga0070689_100072011 3300005340 Bacteria 2701
14 Ga0070689_100877000 3300005340 Bacteria 793
15 Ga0070668_100076476 3300005347 Bacteria 2615
16 Ga0070675_101334437 3300005354 Unclassified 661
17 Ga0070688_100845067 3300005365 Unclassified 719
18 Ga0070667_100229977 3300005367 Bacteria 1653
19 Ga0070701_10063197 3300005438 Bacteria 1958
20 Ga0070708_100040321 3300005445 Bacteria 4089
21 Ga0070663_100002049 3300005455 Bacteria 11255
22 Ga0070663_100766113 3300005455 Bacteria 825
23 Ga0070678_100035329 3300005456 Bacteria 3488
24 Ga0070681_10539771 3300005458 Bacteria 1080
25 Ga0068867_100014708 3300005459 Archaea 5546
26 Ga0068867_100085831 3300005459 Bacteria 2380
27 Ga0070685_10211945 3300005466 Bacteria 1265
28 Ga0070685_10503960 3300005466 Unclassified 857
29 Ga0070698_100000382 3300005471 Bacteria 46452
30 Ga0070698_100012659 3300005471 Bacteria 8932
31 Ga0070699_100665003 3300005518 Unclassified 951
32 Ga0070679_100702635 3300005530 Bacteria 954
33 Ga0070679_100994490 3300005530 Bacteria 783
34 Ga0070684_100420358 3300005535 Bacteria 1234
35 Ga0070672_101116480 3300005543 Bacteria 701
36 Ga0070695_101116965 3300005545 Bacteria 646
37 Ga0070696_100835738 3300005546 Bacteria 760
38 Ga0070665_100012631 3300005548 Bacteria 8503
39 Ga0070665_100268073 3300005548 Bacteria 1709
40 Ga0070665_101678041 3300005548 Bacteria 643
41 Ga0070704_100111176 3300005549 Bacteria 2085
42 Ga0068856_100110800 3300005614 Bacteria 2742
43 Ga0068861_100063839 3300005719 Bacteria 2832
44 Ga0068861_100324840 3300005719 Bacteria 1341
45 Ga0068863_100013794 3300005841 Bacteria 7788
46 Ga0068858_100471574 3300005842 Bacteria 1211
47 Ga0068858_100517278 3300005842 Bacteria 1154
48 Ga0068858_100848486 3300005842 Bacteria 892
49 Ga0068860_100127214 3300005843 Bacteria 2442
50 Ga0068860_101477164 3300005843 Unclassified 701
51 Ga0068862_100154926 3300005844 Bacteria 2042
52 Ga0081455_10065342 3300005937 Bacteria 3043
53 Ga0081539_10036890 3300005985 Unclassified 2918
54 Ga0070717_10002958 3300006028 Bacteria 12074
55 Ga0070717_10060132 3300006028 Bacteria 3145
56 Ga0075362_10478105 3300006177 Unclassified 635
57 Ga0075367_10211515 3300006178 Bacteria 1213
58 Ga0075366_10031931 3300006195 Bacteria 3100
59 Ga0075366_10235035 3300006195 Unclassified 1117
60 Ga0097621_100092263 3300006237 Bacteria 2536
61 Ga0097621_100356015 3300006237 Bacteria 1303
62 Ga0075370_10016159 3300006353 Bacteria 4012
63 Ga0068871_100247040 3300006358 Bacteria 1553
64 Ga0068871_100293224 3300006358 Bacteria 1426
65 Ga0075430_100328891 3300006846 Bacteria 1263
66 Ga0075431_100373592 3300006847 Bacteria 1431
67 Ga0075429_100019114 3300006880 Bacteria 5935
68 Ga0075435_100428242 3300007076 Bacteria 1140
69 Ga0075435_100543240 3300007076 Bacteria 1006
70 Ga0105240_10871747 3300009093 Bacteria 970
71 Ga0114129_10590816 3300009147 Bacteria 1440
72 Ga0114129_11923518 3300009147 Bacteria 717
73 Ga0105243_10460357 3300009148 Bacteria 1196
74 Ga0105243_10659370 3300009148 Bacteria 1015
75 Ga0105242_10193985 3300009176 Bacteria 1800
76 Ga0105242_11047075 3300009176 Bacteria 827
77 Ga0105248_11382604 3300009177 Bacteria 796
78 Ga0105249_10051057 3300009553 Bacteria 3771
79 Ga0105249_10111430 3300009553 Bacteria 2588
80 Ga0105249_10232714 3300009553 Bacteria 1818
81 Ga0157374_10177816 3300013296 Bacteria 2077
82 Ga0157378_11300803 3300013297 Bacteria 768
83 Ga0157375_10271647 3300013308 Bacteria 1858
84 Ga0157375_12357001 3300013308 Bacteria 635
85 Ga0163163_10050923 3300014325 Bacteria 4080
86 Ga0163163_11005952 3300014325 Bacteria 897
87 Ga0163163_11670011 3300014325 Bacteria 698
88 Ga0157380_10164390 3300014326 Bacteria 1932
89 Ga0157379_10365557 3300014968 Unclassified 1323
90 Ga0157379_11564750 3300014968 Bacteria 643
91 Ga0157376_10087958 3300014969 Bacteria 2682
92 Ga0157376_10090525 3300014969 Unclassified 2648
93 Ga0213876_10217596 3300021384 Archaea 1016
94 Ga0207653_10126679 3300025885 Bacteria 924
95 Ga0207685_10311386 3300025905 Bacteria 782
96 Ga0207645_10302135 3300025907 Bacteria 1066
97 Ga0207705_10610666 3300025909 Bacteria 848
98 Ga0207684_10107317 3300025910 Bacteria 2389
99 Ga0207684_10932213 3300025910 Bacteria 729
100 Ga0207707_10283966 3300025912 Bacteria 1433
101 Ga0207671_10715658 3300025914 Bacteria 796
102 Ga0207663_10663298 3300025916 Bacteria 824
103 Ga0207660_10300064 3300025917 Bacteria 1279
104 Ga0207662_10167801 3300025918 Bacteria 1406
105 Ga0207652_10488870 3300025921 Bacteria 1108
106 Ga0207650_10422762 3300025925 Bacteria 1106
107 Ga0207659_11039096 3300025926 Unclassified 705
108 Ga0207690_10463220 3300025932 Bacteria 1020
109 Ga0207686_10116314 3300025934 Bacteria 1812
110 Ga0207709_10319569 3300025935 Bacteria 1161
111 Ga0207670_10090054 3300025936 Bacteria 2166
112 Ga0207670_10699864 3300025936 Bacteria 839
113 Ga0207670_11396646 3300025936 Bacteria 594
114 Ga0207669_10179310 3300025937 Bacteria 1517
115 Ga0207691_10993742 3300025940 Bacteria 700
116 Ga0207689_10066505 3300025942 Bacteria 2963
117 Ga0207689_10102562 3300025942 Bacteria 2351
118 Ga0207689_10141528 3300025942 Bacteria 1981
119 Ga0207712_10069464 3300025961 Bacteria 2527
120 Ga0207668_10144848 3300025972 Bacteria 1832
121 Ga0207677_10019214 3300026023 Bacteria 4122
122 Ga0207677_10250957 3300026023 Bacteria 1437
123 Ga0207677_10952787 3300026023 Bacteria 776
124 Ga0207703_10750756 3300026035 Bacteria 930
125 Ga0207703_10934915 3300026035 Bacteria 831
126 Ga0207678_10949152 3300026067 Bacteria 761
127 Ga0207708_10152662 3300026075 Bacteria 1819
128 Ga0207708_10294286 3300026075 Bacteria 1319
129 Ga0207702_10330223 3300026078 Bacteria 1454
130 Ga0207702_11322238 3300026078 Bacteria 715
131 Ga0207648_10022708 3300026089 Archaea 5629
132 Ga0207648_10069578 3300026089 Bacteria 3067
133 Ga0207674_10544827 3300026116 Bacteria 1121
134 Ga0207675_100354099 3300026118 Bacteria 1439
135 Ga0207675_100406749 3300026118 Bacteria 1342
136 Ga0207675_101927964 3300026118 Bacteria 609
137 Ga0207683_10011382 3300026121 Bacteria 7591
138 Ga0207683_10615603 3300026121 Unclassified 1005
139 Ga0207698_11925234 3300026142 Bacteria 606
140 Ga0268266_10003230 3300028379 Bacteria 16467
141 Ga0268266_10496429 3300028379 Bacteria 1165
142 Ga0268266_10689915 3300028379 Bacteria 984
143 Ga0268265_10130011 3300028380 Bacteria 2091
144 Ga0268264_10016948 3300028381 Bacteria 5963
145 Ga0268264_11268015 3300028381 Bacteria 747
146 Ga0268264_11289786 3300028381 Unclassified 740
147 Ga0307515_10010237 3300028794 Bacteria 18004
148 Ga0265338_10079155 3300028800 Bacteria 2767
149 Ga0265332_10013774 3300031238 Bacteria 3580
150 Ga0265339_10006113 3300031249 Bacteria 7945
151 Ga0307509_10000429 3300031507 Bacteria 70665
152 Ga0307509_10009307 3300031507 Bacteria 12324
153 Ga0307509_10031676 3300031507 Bacteria 5837
154 Ga0307509_10055588 3300031507 Bacteria 4206
155 Ga0307509_10062058 3300031507 Bacteria 3943
156 Ga0307508_10019656 3300031616 Bacteria 6137
157 Ga0316575_10018183 3300031665 Bacteria 2677
158 Ga0265314_10001480 3300031711 Bacteria 26127
159 Ga0265342_10034590 3300031712 Bacteria 3099
160 Ga0316576_10545701 3300031727 Bacteria 850
161 Ga0316576_10623939 3300031727 Bacteria 786
162 Ga0316578_10045105 3300031728 Bacteria 2566
163 Ga0307516_10012498 3300031730 Bacteria 9145
164 Ga0307516_10022872 3300031730 Bacteria 6415
165 Ga0307405_10036834 3300031731 Bacteria 2935
166 Ga0307405_10050986 3300031731 Bacteria 2566
167 Ga0316577_10270139 3300031733 Bacteria 962
168 Ga0307406_10362812 3300031901 Bacteria 1136
169 Ga0307407_10069036 3300031903 Bacteria 2096
170 Ga0307416_100057225 3300032002 Bacteria 3153
171 Ga0307411_11823101 3300032005 Unclassified 565
172 Ga0307415_100139325 3300032126 Bacteria 1850
173 Ga0316585_10119307 3300032137 Bacteria 868
174 Ga0373936_0000102 3300035113 Bacteria 30963
175 Ga0373941_0003138 3300035115 Bacteria 3711
176 Ga0373941_0164612 3300035115 Unclassified 822
177 Ga0373954_0070894 3300035118 Bacteria 1656
178 Ga0373956_0036269 3300035119 Bacteria 2176
179 Ga0373961_0000029 3300035241 Bacteria 93421
180 Ga0316574_0029990 3300035398 Bacteria 3290
181 Ga0316574_0184398 3300035398 Bacteria 1342
182 Ga0373931_0552637 3300035691 Bacteria 748
183 Ga0373937_1031762 3300036401 Bacteria 771
184 Ga0316582_0562843 3300036647 Bacteria 785
185 Ga0395900_0019081 3300037418 Bacteria 6992
186 Ga0395900_0163247 3300037418 Bacteria 2271
187 Ga0395900_1496525 3300037418 Bacteria 587
188 Ga0395905_0121306 3300037471 Bacteria 2457
189 Ga0395905_1172525 3300037471 Bacteria 672
190 Ga0395901_0051099 3300038443 Bacteria 4296
191 Ga0400491_23488 3300038727 Bacteria 2897
192 Ga0436365_0454714 3300039437 Bacteria 1069
193 Ga0436365_1316546 3300039437 Bacteria 607
194 Ga0436365_1811252 3300039437 Bacteria 2654
195 Ga0436365_1863170 3300039437 Bacteria 780
196 Ga0436363_0287157 3300039450 Bacteria 1829
197 Ga0436362_0031180 3300039453 Bacteria 607
198 Ga0451793_0845814 3300041452 Bacteria 1774
199 Ga0451798_0142792 3300041458 Bacteria 651
200 Ga0451849_0036185 3300041505 Bacteria 663
201 Ga0451577_0023760 3300042876 Bacteria 5586
202 Ga0453684_0268379 3300044712 Bacteria 1951
203 Ga0453684_0786484 3300044712 Bacteria 1027
204 Ga0466967_0588644 3300045976 Bacteria 1097
205 Ga0495650_0070531 3300046471 Bacteria 1372
206 Ga0495658_0564842 3300046683 Bacteria 729
207 Ga0495686_0052355 3300047472 Bacteria 2560
208 Ga0496104_0766836 3300048907 Bacteria 871
209 Ga0496108_0216760 3300048911 Bacteria 1662
210 Ga0501310_078172 3300049130 Unclassified 516
211 Ga0501298_005155 3300049521 Bacteria 2084
212 Ga0501299_008252 3300049522 Bacteria 1689
213 Ga0501034_0167961 3300049571 Bacteria 2162
214 Ga0501036_0065601 3300049572 Bacteria 3072
215 Ga0501036_0311602 3300049572 Bacteria 1316
216 Ga0501043_0723407 3300049579 Bacteria 725
217 Ga0501047_0006552 3300049581 Bacteria 10963
218 Ga0501047_0025500 3300049581 Bacteria 5683
219 Ga0501048_0135118 3300049582 Archaea 1743
220 Ga0501068_0103757 3300049584 Bacteria 1764
221 Ga0501068_0746860 3300049584 Bacteria 641
222 Ga0501069_0012026 3300049585 Bacteria 4595
223 Ga0501069_0052884 3300049585 Bacteria 2262
224 Ga0501070_0063901 3300049586 Bacteria 3049
225 Ga0501070_0076981 3300049586 Bacteria 2761
226 Ga0501070_0258494 3300049586 Bacteria 1423
227 Ga0501073_0134065 3300049589 Bacteria 1717
228 Ga0501073_0984680 3300049589 Bacteria 580
229 Ga0501074_0186080 3300049590 Bacteria 1481
230 Ga0501077_0500380 3300049593 Bacteria 779
231 Ga0501216_001741 3300049660 Bacteria 2983
232 Ga0501217_012042 3300049661 Bacteria 1921
233 Ga0501227_005299 3300049665 Bacteria 2761
234 Ga0501230_006559 3300049667 Bacteria 1693
235 Ga0501230_075481 3300049667 Bacteria 699
236 Ga0501236_024575 3300049670 Bacteria 915
237 Ga0501225_0007901 3300049705 Bacteria 3070
238 Ga0501080_0393573 3300049742 Bacteria 1247
239 Ga0501083_0048584 3300049744 Bacteria 2863
240 Ga0501083_0162083 3300049744 Bacteria 1463
241 Ga0501035_0175809 3300049822 Bacteria 1847
242 Ga0501044_0014956 3300049823 Bacteria 8367
243 nmdc:mga03n38_312255_c1 3300050490 Bacteria 847
244 nmdc:mga0k408_247571_c1 3300050493 Unclassified 1064
245 nmdc:mga0k408_83940_c1 3300050493 Bacteria 1868
246 nmdc:mga07m45_17154_c1 3300050496 Bacteria 3883
247 nmdc:mga05p37_1648315_c1 3300050507 Bacteria 629
248 nmdc:mga09592_63358_c1 3300050508 Bacteria 3129
249 nmdc:mga0qj67_513507_c1 3300050509 Bacteria 963
250 nmdc:mga06r32_450831_c1 3300050510 Bacteria 1266
251 nmdc:mga0rr50_115580_c1 3300050513 Bacteria 2129
252 nmdc:mga0rr50_377551_c1 3300050513 Bacteria 1195
253 nmdc:mga0rr50_413907_c1 3300050513 Bacteria 1140
254 Ga0500635_0033668 3300053080 Bacteria 1673
255 Ga0500578_0115962 3300053086 Bacteria 1686
256 Ga0500646_0039122 3300053090 Bacteria 1329
257 Ga0500646_0244666 3300053090 Bacteria 629
258 Ga0500647_0071207 3300053091 Bacteria 1671
259 Ga0500583_0030261 3300053092 Bacteria 2370
260 Ga0500583_0336579 3300053092 Bacteria 733
261 Ga0500566_0048799 3300053094 Bacteria 2426
262 Ga0500566_0051324 3300053094 Bacteria 2359
263 Ga0500566_0165703 3300053094 Bacteria 1147
264 Ga0500640_018713 3300053095 Bacteria 2959
265 Ga0500554_000507 3300053102 Bacteria 8108
266 Ga0500562_103016 3300053108 Unclassified 777
267 Ga0500595_000274 3300053119 Bacteria 34028
268 Ga0500597_235915 3300053120 Bacteria 754
269 Ga0500607_098278 3300053121 Bacteria 1459
270 Ga0500608_127210 3300053122 Bacteria 1147
271 Ga0500614_014020 3300053123 Bacteria 1768
272 Ga0500642_0036310 3300053130 Bacteria 2099
273 Ga0500658_0038262 3300053134 Bacteria 1911
274 Ga0500559_0044750 3300053136 Bacteria 1937
275 Ga0500564_289021 3300053138 Bacteria 634
276 Ga0500568_0021181 3300053139 Bacteria 2800
277 Ga0500568_0024330 3300053139 Bacteria 2566
278 Ga0500603_004919 3300053150 Bacteria 2865
279 Ga0500619_051302 3300053154 Bacteria 1336
280 Ga0500636_0352457 3300053177 Bacteria 702
281 Ga0500596_075046 3300053735 Bacteria 582
282 Ga0501084_0961705 3300054114 Bacteria 718
283 Ga0501082_0081144 3300060353 Bacteria 2799
284 Ga0501082_0087059 3300060353 Bacteria 2695
285 nmdc:mga09592_15584_c1
286 Ga0058861_11824186
287 Ga0058860_12162812
288 Ga0070690_100040523
289 Ga0070690_100092846
290 Ga0070670_100336578
291 Ga0070670_100648582
292 Ga0070682_100014136
293 Ga0068868_100005520
294 Ga0068868_100298088
295 Ga0070689_100006317
296 Ga0070689_100040101
297 Ga0070689_100072011
298 Ga0070689_100877000
299 Ga0070668_100076476
300 Ga0070675_101334437
301 Ga0070688_100845067
302 Ga0070667_100229977
303 Ga0070701_10063197
304 Ga0070708_100040321
305 Ga0070663_100002049
306 Ga0070663_100766113
307 Ga0070678_100035329
308 Ga0070681_10539771
309 Ga0068867_100014708
310 Ga0068867_100085831
311 Ga0070685_10211945
312 Ga0070685_10503960
313 Ga0070698_100000382
314 Ga0070698_100012659
315 Ga0070699_100665003
316 Ga0070679_100702635
317 Ga0070679_100994490
318 Ga0070684_100420358
319 Ga0070672_101116480
320 Ga0070695_101116965
321 Ga0070696_100835738
322 Ga0070665_100012631
323 Ga0070665_100268073
324 Ga0070665_101678041
325 Ga0070704_100111176
326 Ga0068856_100110800
327 Ga0068861_100063839
328 Ga0068861_100324840
329 Ga0068863_100013794
330 Ga0068858_100471574
331 Ga0068858_100517278
332 Ga0068858_100848486
333 Ga0068860_100127214
334 Ga0068860_101477164
335 Ga0068862_100154926
336 Ga0081455_10065342
337 Ga0081539_10036890
338 Ga0070717_10002958
339 Ga0070717_10060132
340 Ga0075362_10478105
341 Ga0075367_10211515
342 Ga0075366_10031931
343 Ga0075366_10235035
344 Ga0097621_100092263
345 Ga0097621_100356015
346 Ga0075370_10016159
347 Ga0068871_100247040
348 Ga0068871_100293224
349 Ga0075430_100328891
350 Ga0075431_100373592
351 Ga0075429_100019114
352 Ga0075435_100428242
353 Ga0075435_100543240
354 Ga0105240_10871747
355 Ga0114129_10590816
356 Ga0114129_11923518
357 Ga0105243_10460357
358 Ga0105243_10659370
359 Ga0105242_10193985
360 Ga0105242_11047075
361 Ga0105248_11382604
362 Ga0105249_10051057
363 Ga0105249_10111430
364 Ga0105249_10232714
365 Ga0157374_10177816
366 Ga0157378_11300803
367 Ga0157375_10271647
368 Ga0157375_12357001
369 Ga0163163_10050923
370 Ga0163163_11005952
371 Ga0163163_11670011
372 Ga0157380_10164390
373 Ga0157379_10365557
374 Ga0157379_11564750
375 Ga0157376_10087958
376 Ga0157376_10090525
377 Ga0213876_10217596
378 Ga0207653_10126679
379 Ga0207685_10311386
380 Ga0207645_10302135
381 Ga0207705_10610666
382 Ga0207684_10107317
383 Ga0207684_10932213
384 Ga0207707_10283966
385 Ga0207671_10715658
386 Ga0207663_10663298
387 Ga0207660_10300064
388 Ga0207662_10167801
389 Ga0207652_10488870
390 Ga0207650_10422762
391 Ga0207659_11039096
392 Ga0207690_10463220
393 Ga0207686_10116314
394 Ga0207709_10319569
395 Ga0207670_10090054
396 Ga0207670_10699864
397 Ga0207670_11396646
398 Ga0207669_10179310
399 Ga0207691_10993742
400 Ga0207689_10066505
401 Ga0207689_10102562
402 Ga0207689_10141528
403 Ga0207712_10069464
404 Ga0207668_10144848
405 Ga0207677_10019214
406 Ga0207677_10250957
407 Ga0207677_10952787
408 Ga0207703_10750756
409 Ga0207703_10934915
410 Ga0207678_10949152
411 Ga0207708_10152662
412 Ga0207708_10294286
413 Ga0207702_10330223
414 Ga0207702_11322238
415 Ga0207648_10022708
416 Ga0207648_10069578
417 Ga0207674_10544827
418 Ga0207675_100354099
419 Ga0207675_100406749
420 Ga0207675_101927964
421 Ga0207683_10011382
422 Ga0207683_10615603
423 Ga0207698_11925234
424 Ga0268266_10003230
425 Ga0268266_10496429
426 Ga0268266_10689915
427 Ga0268265_10130011
428 Ga0268264_10016948
429 Ga0268264_11268015
430 Ga0268264_11289786
431 Ga0307515_10010237
432 Ga0265338_10079155
433 Ga0265332_10013774
434 Ga0265339_10006113
435 Ga0307509_10000429
436 Ga0307509_10009307
437 Ga0307509_10031676
438 Ga0307509_10055588
439 Ga0307509_10062058
440 Ga0307508_10019656
441 Ga0316575_10018183
442 Ga0265314_10001480
443 Ga0265342_10034590
444 Ga0316576_10545701
445 Ga0316576_10623939
446 Ga0316578_10045105
447 Ga0307516_10012498
448 Ga0307516_10022872
449 Ga0307405_10036834
450 Ga0307405_10050986
451 Ga0316577_10270139
452 Ga0307406_10362812
453 Ga0307407_10069036
454 Ga0307416_100057225
455 Ga0307411_11823101
456 Ga0307415_100139325
457 Ga0316585_10119307
458 Ga0373936_0000102
459 Ga0373941_0003138
460 Ga0373941_0164612
461 Ga0373954_0070894
462 Ga0373956_0036269
463 Ga0373961_0000029
464 Ga0316574_0029990
465 Ga0316574_0184398
466 Ga0373931_0552637
467 Ga0373937_1031762
468 Ga0316582_0562843
469 Ga0395900_0019081
470 Ga0395900_0163247
471 Ga0395900_1496525
472 Ga0395905_0121306
473 Ga0395905_1172525
474 Ga0395901_0051099
475 Ga0400491_23488
476 Ga0436365_0454714
477 Ga0436365_1316546
478 Ga0436365_1811252
479 Ga0436365_1863170
480 Ga0436363_0287157
481 Ga0436362_0031180
482 Ga0451793_0845814
483 Ga0451798_0142792
484 Ga0451849_0036185
485 Ga0451577_0023760
486 Ga0453684_0268379
487 Ga0453684_0786484
488 Ga0466967_0588644
489 Ga0495650_0070531
490 Ga0495658_0564842
491 Ga0495686_0052355
492 Ga0496104_0766836
493 Ga0496108_0216760
494 Ga0501310_078172
495 Ga0501298_005155
496 Ga0501299_008252
497 Ga0501034_0167961
498 Ga0501036_0065601
499 Ga0501036_0311602
500 Ga0501043_0723407
501 Ga0501047_0006552
502 Ga0501047_0025500
503 Ga0501048_0135118
504 Ga0501068_0103757
505 Ga0501068_0746860
506 Ga0501069_0012026
507 Ga0501069_0052884
508 Ga0501070_0063901
509 Ga0501070_0076981
510 Ga0501070_0258494
511 Ga0501073_0134065
512 Ga0501073_0984680
513 Ga0501074_0186080
514 Ga0501077_0500380
515 Ga0501216_001741
516 Ga0501217_012042
517 Ga0501227_005299
518 Ga0501230_006559
519 Ga0501230_075481
520 Ga0501236_024575
521 Ga0501225_0007901
522 Ga0501080_0393573
523 Ga0501083_0048584
524 Ga0501083_0162083
525 Ga0501035_0175809
526 Ga0501044_0014956
527 nmdc:mga03n38_312255_c1
528 nmdc:mga0k408_247571_c1
529 nmdc:mga0k408_83940_c1
530 nmdc:mga07m45_17154_c1
531 nmdc:mga05p37_1648315_c1
532 nmdc:mga09592_63358_c1
533 nmdc:mga0qj67_513507_c1
534 nmdc:mga06r32_450831_c1
535 nmdc:mga0rr50_115580_c1
536 nmdc:mga0rr50_377551_c1
537 nmdc:mga0rr50_413907_c1
538 Ga0500635_0033668
539 Ga0500578_0115962
540 Ga0500646_0039122
541 Ga0500646_0244666
542 Ga0500647_0071207
543 Ga0500583_0030261
544 Ga0500583_0336579
545 Ga0500566_0048799
546 Ga0500566_0051324
547 Ga0500566_0165703
548 Ga0500640_018713
549 Ga0500554_000507
550 Ga0500562_103016
551 Ga0500595_000274
552 Ga0500597_235915
553 Ga0500607_098278
554 Ga0500608_127210
555 Ga0500614_014020
556 Ga0500642_0036310
557 Ga0500658_0038262
558 Ga0500559_0044750
559 Ga0500564_289021
560 Ga0500568_0021181
561 Ga0500568_0024330
562 Ga0500603_004919
563 Ga0500619_051302
564 Ga0500636_0352457
565 Ga0500596_075046
566 Ga0501084_0961705
567 Ga0501082_0081144
568 Ga0501082_0087059

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00160

Pro_isomerase

Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD

44

207

0.92

Structural Annotation

Top 5 Hits

ID Description Score Start End
3jb9-assembly1.cif.gz_d cryo-em structure of the yeast spliceosome at 3.6 angstrom resolution 0.9326 4 167
2a2n-assembly2.cif.gz_B crystal structure of the peptidylprolyl isomerase domain of human ppwd1 0.93 5 168
2b71-assembly1.cif.gz_A plasmodium yoelii cyclophilin-like protein 0.9287 5 166
1zkc-assembly2.cif.gz_B crystal structure of the cyclophiln_ring domain of human peptidylprolyl isomerase (cyclophilin)-like 2 isoform b 0.9248 2 168
5yzg-assembly1.cif.gz_2 the cryo-em structure of human catalytic step i spliceosome (c complex) at 4.1 angstrom resolution 0.922 5 168
ID Description Score Start End Superfamily
af_Q9FJX0_326_510_2.40.100.10 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.9346 3 170 2.40.100.10
af_A0A0R4J2Z8_2_164_2.40.100.10 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.9344 2 169 2.40.100.10
af_P52012_262_474_2.40.100.10 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.9251 1 170 2.40.100.10
1xyhA00 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.9205 5 170 2.40.100.10
af_A0A0R4J2Z8_2_164_2.40.100.10 Mainly Beta;Beta Barrel;Cyclophilin;Cyclophilin-like 0.8958 2 169 2.40.100.10
ID Description Score Start End GO Terms
AF-A0A813GF73-F1-model_v4 Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) 0.9761 3 168 GO:0003755
AF-A0A7S3ZWK9-F1-model_v4 Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) 0.9753 1 167 GO:0003755
GO:0006457
AF-A0A7R9TE54-F1-model_v4 Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) 0.9738 1 169 GO:0003755
AF-A0A7S3BB86-F1-model_v4 Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) 0.9734 1 169 GO:0003755
GO:0006457
AF-A3E4C5-F1-model_v4 Peptidyl-prolyl cis-trans isomerase (PPIase) (EC 5.2.1.8) 0.9706 2 170 GO:0006457
GO:0140839
GO:0140840

Map