F386342

General Info

Members Datasets Scaffolds Average Seq Length
284 179 569 245

Family's Representative Sequence

Representative Sequence 3300044693|Ga0466961_0097832|Ga0466961_0097832_782_1630
Length 282
Sequence VRRSSSPPGADALSAPPAGRRGNPAFAEATESYKRIMPATPAWPPASTPRLFVSQSLDSGTALTLDGAQANYLANVMRLRTGDPVRLFDDRTGEWLAEVGDTGKRSVTVHVTAQLRERENVPDLWLLFAPIKKGPIDWLVEKATELGVARLQPVITARTIVDRTNLDRLRAHTIEAAEQCNRTALPELAEPVKLAALLKGWDAARMLIFADETGGRRPAEVATAGPAAILIGPEGGFTPEERDLIRATQGAVGVSLGPRILRAETAAAAAISAWMCLAGDWR

Samples

Sample ID Description Type Environment
1 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
2 3300001904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 Metagenome Rhizosphere
3 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
4 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
5 3300001990 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3 Metagenome Rhizosphere
6 3300001991 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2 Metagenome Rhizosphere
7 3300002067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C1 Metagenome Rhizosphere
8 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
9 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
10 3300002076 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3 Metagenome Rhizosphere
11 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
12 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
13 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
14 3300003214 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL Metagenome Endosphere
15 3300003316 Sugarcane root Sample L1 Metagenome Unclassified
16 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
17 3300003781 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 Metagenome Endosphere
18 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
19 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
20 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
21 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
22 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
23 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
24 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
25 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
26 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
27 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
28 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
29 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
30 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
31 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
32 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
33 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
34 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
35 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
36 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
37 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
38 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
39 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
40 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
41 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
42 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
43 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
44 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
45 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
46 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
47 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
48 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
49 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
50 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
51 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
52 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
53 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
54 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
55 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
56 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
59 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
60 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
61 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
62 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
63 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
64 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
65 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
66 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
67 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
68 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
69 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
70 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
71 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
72 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
73 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
74 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
75 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
76 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
77 3300025231 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
78 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
79 3300025254 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mMF_r2 (SPAdes) (version 2) Metagenome Endosphere
80 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
81 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
82 3300025292 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
83 3300025298 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
84 3300025321 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
122 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
123 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
125 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
126 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
127 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
128 3300033180 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 12_EM Metagenome Unclassified
129 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
130 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
131 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
132 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
133 3300042008 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z062817_5219 Metagenome Rhizosphere
134 3300042012 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z062817_5213 Metagenome Rhizosphere
135 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
136 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
137 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
138 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
139 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
140 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
141 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
142 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
143 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
144 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
145 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
146 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
147 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
148 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
149 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
150 3300047443 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co3_24_32 rhizosphere Metagenome Rhizosphere
151 3300047472 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co2_54_22 rhizosphere Metagenome Rhizosphere
152 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
153 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
154 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
155 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
156 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
157 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
158 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
159 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
160 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
161 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
162 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
163 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
164 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
165 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
166 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
167 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
168 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
169 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
170 3300049460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co2_41_10 rhizosphere Metagenome Rhizosphere
171 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
172 3300049758 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D15_A_3_drought Metagenome Rhizosphere
173 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
174 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
175 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
176 3300053122 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 endosphere Metagenome Endosphere
177 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
178 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
179 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 7.39
Nodule 0
Rhizoplane 3.17
Rhizosphere 80.63
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0466961_0097832 3300044693 Bacteria 1850
2 JGI24736J21556_1000034 3300001904 Bacteria 23064
3 JGI24740J21852_10032315 3300001979 Bacteria 1675
4 JGI24740J21852_10038068 3300001979 Bacteria 1479
5 JGI24739J22299_10002699 3300001989 Bacteria 6829
6 JGI24739J22299_10005940 3300001989 Bacteria 4622
7 JGI24739J22299_10007783 3300001989 Bacteria 4010
8 JGI24739J22299_10023774 3300001989 Bacteria 2163
9 JGI24737J22298_10000480 3300001990 Bacteria 13819
10 JGI24737J22298_10003441 3300001990 Bacteria 5595
11 JGI24737J22298_10005285 3300001990 Bacteria 4464
12 JGI24737J22298_10039087 3300001990 Bacteria 1459
13 JGI24743J22301_10010870 3300001991 Bacteria 1629
14 JGI24735J21928_10001544 3300002067 Bacteria 8171
15 JGI24735J21928_10013846 3300002067 Bacteria 2530
16 JGI24735J21928_10043285 3300002067 Bacteria 1310
17 JGI24735J21928_10107722 3300002067 Bacteria 801
18 JGI24748J21848_1000034 3300002074 Bacteria 74812
19 JGI24738J21930_10000114 3300002075 Bacteria 18967
20 JGI24738J21930_10000458 3300002075 Bacteria 11572
21 JGI24749J21850_1000580 3300002076 Bacteria 5339
22 JGI24744J21845_10001105 3300002077 Bacteria 5233
23 JGI24034J26672_10000018 3300002239 Bacteria 130180
24 JGI24742J22300_10017622 3300002244 Bacteria 1208
25 JGI24742J22300_10022739 3300002244 Bacteria 1075
26 JGI25165J46597_1000127 3300003214 Bacteria 130786
27 rootH1_10049214 3300003316 Bacteria 2236
28 rootH1_10049214 3300003323 Bacteria 1637
29 Ga0055537_1003832 3300003773 Bacteria 4502
30 Ga0055536_1002264 3300003781 Bacteria 10936
31 Ga0065165_1010375 3300005262 Bacteria 4038
32 Ga0065707_10081792 3300005295 Bacteria 40444
33 Ga0070658_10000055 3300005327 Bacteria 114800
34 Ga0070658_10002097 3300005327 Bacteria 16720
35 Ga0070658_10093452 3300005327 Bacteria 2481
36 Ga0070676_10005948 3300005328 Bacteria 6511
37 Ga0070690_100000008 3300005330 Bacteria 118441
38 Ga0070670_100107539 3300005331 Bacteria 2403
39 Ga0068869_100000246 3300005334 Bacteria 28654
40 Ga0070666_10000032 3300005335 Bacteria 129142
41 Ga0070666_10087623 3300005335 Bacteria 2134
42 Ga0068868_100002777 3300005338 Bacteria 12127
43 Ga0070660_100000667 3300005339 Bacteria 22709
44 Ga0070660_100034420 3300005339 Bacteria 3827
45 Ga0070660_100155430 3300005339 Bacteria 1841
46 Ga0070668_100178106 3300005347 Bacteria 1735
47 Ga0070669_100000211 3300005353 Bacteria 48717
48 Ga0070675_100004619 3300005354 Bacteria 10516
49 Ga0070671_100013761 3300005355 Bacteria 6527
50 Ga0070671_100030717 3300005355 Bacteria 4434
51 Ga0070671_100041181 3300005355 Bacteria 3838
52 Ga0070674_100011603 3300005356 Bacteria 5370
53 Ga0070673_100000010 3300005364 Bacteria 153851
54 Ga0070673_100870937 3300005364 Bacteria 834
55 Ga0070688_100000278 3300005365 Bacteria 26547
56 Ga0070659_100029396 3300005366 Bacteria 4247
57 Ga0070659_100660184 3300005366 Bacteria 902
58 Ga0070663_100040044 3300005455 Bacteria 3278
59 Ga0070663_100167718 3300005455 Bacteria 1695
60 Ga0070678_100002795 3300005456 Bacteria 9644
61 Ga0070662_100010013 3300005457 Bacteria 6208
62 Ga0070662_100031831 3300005457 Bacteria 3705
63 Ga0070662_100107554 3300005457 Bacteria 2120
64 Ga0070662_100111910 3300005457 Bacteria 2081
65 Ga0070662_100317514 3300005457 Bacteria 1270
66 Ga0070662_100356241 3300005457 Bacteria 1200
67 Ga0068867_100000019 3300005459 Bacteria 97503
68 Ga0070685_10001896 3300005466 Bacteria 10868
69 Ga0068853_100121013 3300005539 Bacteria 2335
70 Ga0068853_100619693 3300005539 Bacteria 1028
71 Ga0068853_100678652 3300005539 Bacteria 982
72 Ga0070686_100000030 3300005544 Bacteria 118308
73 Ga0070665_100000056 3300005548 Bacteria 242622
74 Ga0070665_100473513 3300005548 Bacteria 1263
75 Ga0068855_100285372 3300005563 Bacteria 1832
76 Ga0070664_100209712 3300005564 Bacteria 1741
77 Ga0068857_100014640 3300005577 Bacteria 6841
78 Ga0068857_100607180 3300005577 Bacteria 1034
79 Ga0068857_100607181 3300005577 Bacteria 1034
80 Ga0068856_100011034 3300005614 Bacteria 8775
81 Ga0068856_100189160 3300005614 Bacteria 2072
82 Ga0068852_100001788 3300005616 Bacteria 14595
83 Ga0068852_100585038 3300005616 Bacteria 1119
84 Ga0068864_100064614 3300005618 Bacteria 3174
85 Ga0068851_10019481 3300005834 Bacteria 3278
86 Ga0068863_100000065 3300005841 Bacteria 117925
87 Ga0068858_100020293 3300005842 Bacteria 6215
88 Ga0068860_100000132 3300005843 Bacteria 120657
89 Ga0068862_100000356 3300005844 Bacteria 49670
90 Ga0075366_10424886 3300006195 Bacteria 819
91 Ga0068865_100000058 3300006881 Bacteria 60005
92 Ga0105240_10211482 3300009093 Bacteria 2266
93 Ga0105245_10000908 3300009098 Bacteria 26913
94 Ga0105247_10018446 3300009101 Bacteria 4185
95 Ga0105243_10000296 3300009148 Bacteria 55065
96 Ga0105241_10193677 3300009174 Bacteria 1693
97 Ga0105242_10000215 3300009176 Bacteria 45186
98 Ga0105248_10145423 3300009177 Bacteria 2675
99 Ga0105238_10131644 3300009551 Bacteria 2480
100 Ga0105238_10688944 3300009551 Bacteria 1034
101 Ga0105249_10000109 3300009553 Bacteria 112308
102 Ga0105239_10081418 3300010375 Bacteria 3564
103 Ga0105239_10255813 3300010375 Bacteria 1967
104 Ga0105239_10362392 3300010375 Bacteria 1637
105 Ga0157370_10000176 3300013104 Bacteria 79656
106 Ga0157370_10025690 3300013104 Bacteria 5828
107 Ga0157369_10005408 3300013105 Bacteria 14865
108 Ga0157369_10015636 3300013105 Bacteria 8552
109 Ga0157369_10295434 3300013105 Bacteria 1686
110 Ga0157374_10000714 3300013296 Bacteria 29089
111 Ga0157372_10007833 3300013307 Bacteria 11348
112 Ga0157372_10335594 3300013307 Bacteria 1761
113 Ga0157375_10000769 3300013308 Bacteria 28108
114 Ga0163163_10152520 3300014325 Bacteria 2354
115 Ga0157380_10001148 3300014326 Bacteria 17105
116 Ga0157380_10011014 3300014326 Bacteria 6521
117 Ga0157377_10127127 3300014745 Bacteria 1552
118 Ga0157376_10000061 3300014969 Bacteria 91247
119 Ga0163161_10000084 3300017792 Bacteria 93742
120 Ga0207427_100552 3300025231 Bacteria 18979
121 Ga0209026_1004764 3300025250 Bacteria 3889
122 Ga0209148_1000114 3300025254 Bacteria 192073
123 Ga0209148_1002505 3300025254 Bacteria 6196
124 Ga0209233_1000120 3300025261 Bacteria 233311
125 Ga0209455_1000520 3300025272 Bacteria 27264
126 Ga0209676_1000343 3300025292 Bacteria 88398
127 Ga0209050_1012693 3300025298 Bacteria 3833
128 Ga0209050_1042549 3300025298 Bacteria 1238
129 Ga0207656_10079005 3300025321 Bacteria 1475
130 Ga0207680_10000009 3300025903 Bacteria 464571
131 Ga0207647_10000068 3300025904 Bacteria 81240
132 Ga0207647_10000766 3300025904 Bacteria 25085
133 Ga0207647_10005499 3300025904 Bacteria 9275
134 Ga0207645_10001352 3300025907 Bacteria 20135
135 Ga0207705_10000066 3300025909 Bacteria 136520
136 Ga0207705_10000139 3300025909 Bacteria 78756
137 Ga0207705_10002061 3300025909 Bacteria 15634
138 Ga0207705_10077227 3300025909 Bacteria 2422
139 Ga0207705_10321039 3300025909 Bacteria 1190
140 Ga0207654_10000868 3300025911 Bacteria 16743
141 Ga0207695_10003070 3300025913 Bacteria 23930
142 Ga0207695_10276518 3300025913 Bacteria 1573
143 Ga0207671_10006228 3300025914 Bacteria 10699
144 Ga0207657_10002257 3300025919 Bacteria 20882
145 Ga0207657_10010095 3300025919 Bacteria 9441
146 Ga0207657_10020962 3300025919 Bacteria 6164
147 Ga0207657_10070970 3300025919 Bacteria 2950
148 Ga0207657_10117989 3300025919 Bacteria 2185
149 Ga0207681_10000266 3300025923 Bacteria 39786
150 Ga0207694_10001544 3300025924 Bacteria 19570
151 Ga0207694_10025876 3300025924 Bacteria 4461
152 Ga0207650_10086923 3300025925 Bacteria 2381
153 Ga0207659_10124527 3300025926 Bacteria 1980
154 Ga0207644_10012361 3300025931 Bacteria 5668
155 Ga0207644_10027214 3300025931 Bacteria 3950
156 Ga0207690_10176601 3300025932 Bacteria 1604
157 Ga0207690_10179632 3300025932 Bacteria 1592
158 Ga0207690_10252960 3300025932 Bacteria 1362
159 Ga0207690_10336934 3300025932 Bacteria 1189
160 Ga0207690_10547761 3300025932 Bacteria 940
161 Ga0207706_10002721 3300025933 Bacteria 17222
162 Ga0207706_10016684 3300025933 Bacteria 6627
163 Ga0207706_10103459 3300025933 Bacteria 2505
164 Ga0207706_10114428 3300025933 Bacteria 2373
165 Ga0207706_10130157 3300025933 Bacteria 2213
166 Ga0207706_10322372 3300025933 Bacteria 1345
167 Ga0207706_10356312 3300025933 Bacteria 1271
168 Ga0207686_10000358 3300025934 Bacteria 32571
169 Ga0207709_10000050 3300025935 Bacteria 234391
170 Ga0207669_10003240 3300025937 Bacteria 7031
171 Ga0207704_10000051 3300025938 Bacteria 81152
172 Ga0207691_10397348 3300025940 Bacteria 1176
173 Ga0207689_10002014 3300025942 Bacteria 19203
174 Ga0207679_10265038 3300025945 Bacteria 1467
175 Ga0207667_10007311 3300025949 Bacteria 13302
176 Ga0207667_10086559 3300025949 Bacteria 3243
177 Ga0207667_10242792 3300025949 Bacteria 1843
178 Ga0207651_10000005 3300025960 Bacteria 246132
179 Ga0207712_10000046 3300025961 Bacteria 162468
180 Ga0207668_10157571 3300025972 Bacteria 1765
181 Ga0207658_10004703 3300025986 Bacteria 9457
182 Ga0207677_10000128 3300026023 Bacteria 62112
183 Ga0207703_10004380 3300026035 Bacteria 11607
184 Ga0207639_10015482 3300026041 Bacteria 5383
185 Ga0207639_10020007 3300026041 Bacteria 4785
186 Ga0207639_10147542 3300026041 Bacteria 1967
187 Ga0207639_10523607 3300026041 Bacteria 1086
188 Ga0207678_10016104 3300026067 Bacteria 6566
189 Ga0207678_10116627 3300026067 Bacteria 2278
190 Ga0207702_10001550 3300026078 Bacteria 22735
191 Ga0207702_10005007 3300026078 Bacteria 11638
192 Ga0207702_10014573 3300026078 Bacteria 6524
193 Ga0207641_10000063 3300026088 Bacteria 159283
194 Ga0207648_10000068 3300026089 Bacteria 97469
195 Ga0207676_10003249 3300026095 Bacteria 11573
196 Ga0207674_10015561 3300026116 Bacteria 8354
197 Ga0207675_100000167 3300026118 Bacteria 58637
198 Ga0207683_10005360 3300026121 Bacteria 10992
199 Ga0207698_10001259 3300026142 Bacteria 14783
200 Ga0207698_10085079 3300026142 Bacteria 2566
201 Ga0207698_10982784 3300026142 Bacteria 854
202 Ga0268266_10000066 3300028379 Bacteria 242637
203 Ga0268266_10399050 3300028379 Bacteria 1300
204 Ga0268265_10000129 3300028380 Bacteria 96060
205 Ga0268264_10000130 3300028381 Bacteria 181732
206 Ga0307414_10012355 3300032004 Bacteria 5046
207 Ga0307510_10136429 3300033180 Bacteria 2110
208 Ga0395899_0018620 3300037312 Bacteria 5277
209 Ga0395900_0099402 3300037418 Bacteria 2989
210 Ga0395900_0342127 3300037418 Bacteria 1471
211 Ga0395901_0374559 3300038443 Bacteria 1466
212 Ga0439448_0010893 3300042005 Bacteria 2703
213 Ga0439448_0057994 3300042005 Bacteria 1276
214 Ga0439450_002490 3300042008 Bacteria 2904
215 Ga0439455_0009579 3300042012 Bacteria 2107
216 Ga0439455_0010157 3300042012 Bacteria 2062
217 Ga0439458_0001707 3300042157 Bacteria 5489
218 Ga0439458_0024448 3300042157 Bacteria 1412
219 Ga0466972_0005798 3300044658 Bacteria 6191
220 Ga0466972_0031712 3300044658 Bacteria 2598
221 Ga0466965_0015672 3300044683 Bacteria 3601
222 Ga0466961_0094135 3300044693 Bacteria 1890
223 Ga0466963_0003170 3300044694 Bacteria 9343
224 Ga0466964_0039632 3300044706 Bacteria 1899
225 Ga0466971_0001653 3300044719 Bacteria 9425
226 Ga0466968_0091439 3300044735 Bacteria 1349
227 Ga0466970_0038916 3300044765 Bacteria 2524
228 Ga0466970_0156258 3300044765 Bacteria 1260
229 Ga0466957_0052273 3300044842 Bacteria 2487
230 Ga0466960_0001144 3300044901 Bacteria 9520
231 Ga0466959_0013893 3300045049 Bacteria 5845
232 Ga0466959_0053362 3300045049 Bacteria 2956
233 Ga0466958_0028699 3300045836 Bacteria 3300
234 Ga0466958_0093868 3300045836 Bacteria 1858
235 Ga0495638_0043626 3300046460 Bacteria 2828
236 Ga0495583_0000033 3300046506 Bacteria 246882
237 Ga0495625_0001882 3300046660 Bacteria 23799
238 Ga0495687_078348 3300047443 Bacteria 1302
239 Ga0495686_0000053 3300047472 Bacteria 259537
240 Ga0495686_0000996 3300047472 Bacteria 34533
241 Ga0495686_0096588 3300047472 Bacteria 1788
242 Ga0495686_0312913 3300047472 Bacteria 863
243 Ga0496101_0411044 3300048904 Bacteria 1066
244 Ga0496102_0000034 3300048905 Bacteria 213826
245 Ga0496102_0008605 3300048905 Bacteria 8757
246 Ga0496103_0000026 3300048906 Bacteria 213826
247 Ga0496103_0000788 3300048906 Bacteria 23326
248 Ga0496104_0070843 3300048907 Bacteria 3315
249 Ga0496105_0238550 3300048908 Bacteria 1476
250 Ga0496110_0431684 3300048913 Bacteria 1201
251 Ga0496111_0067613 3300048914 Bacteria 2596
252 Ga0496116_0000926 3300048919 Bacteria 36211
253 Ga0496116_0019225 3300048919 Bacteria 5237
254 Ga0496117_0000072 3300048920 Bacteria 238366
255 Ga0496117_0009931 3300048920 Bacteria 8755
256 Ga0496118_0000030 3300048921 Bacteria 339946
257 Ga0496118_0013625 3300048921 Bacteria 7676
258 Ga0496118_0050685 3300048921 Bacteria 3182
259 Ga0496118_0117380 3300048921 Bacteria 1746
260 Ga0496119_0080863 3300048922 Bacteria 1873
261 Ga0496120_0086952 3300048923 Bacteria 1679
262 Ga0496121_0084952 3300048924 Bacteria 2493
263 Ga0496121_0117885 3300048924 Bacteria 2010
264 Ga0496122_0035951 3300048925 Bacteria 4017
265 Ga0496122_0039272 3300048925 Bacteria 3776
266 Ga0496123_0001812 3300048926 Bacteria 28119
267 Ga0496123_0087980 3300048926 Bacteria 1856
268 Ga0496124_0000061 3300048927 Bacteria 238225
269 Ga0496124_0027892 3300048927 Bacteria 5057
270 Ga0496124_0159632 3300048927 Bacteria 1759
271 Ga0496125_0046168 3300048928 Bacteria 3657
272 Ga0496125_0112024 3300048928 Bacteria 1973
273 Ga0496126_0545782 3300048929 Bacteria 921
274 Ga0495682_0088423 3300049460 Bacteria 1113
275 Ga0501047_0223477 3300049581 Bacteria 1739
276 Ga0501241_006129 3300049758 Bacteria 2223
277 Ga0500643_000248 3300053087 Bacteria 49637
278 Ga0500566_0066323 3300053094 Bacteria 2034
279 Ga0500566_0134191 3300053094 Bacteria 1321
280 Ga0500555_000972 3300053103 Bacteria 9921
281 Ga0500608_144422 3300053122 Bacteria 1050
282 Ga0500577_0019833 3300053142 Bacteria 2188
283 Ga0500577_0101135 3300053142 Bacteria 1178
284 Ga0500616_0072243 3300053153 Bacteria 1754
285 Ga0466962_0007522 3300061719 Bacteria 5225
286 Ga0466961_0097832
287 JGI24736J21556_1000034
288 JGI24740J21852_10032315
289 JGI24740J21852_10038068
290 JGI24739J22299_10002699
291 JGI24739J22299_10005940
292 JGI24739J22299_10007783
293 JGI24739J22299_10023774
294 JGI24737J22298_10000480
295 JGI24737J22298_10003441
296 JGI24737J22298_10005285
297 JGI24737J22298_10039087
298 JGI24743J22301_10010870
299 JGI24735J21928_10001544
300 JGI24735J21928_10013846
301 JGI24735J21928_10043285
302 JGI24735J21928_10107722
303 JGI24748J21848_1000034
304 JGI24738J21930_10000114
305 JGI24738J21930_10000458
306 JGI24749J21850_1000580
307 JGI24744J21845_10001105
308 JGI24034J26672_10000018
309 JGI24742J22300_10017622
310 JGI24742J22300_10022739
311 JGI25165J46597_1000127
312 rootH1_10049214
313 Ga0055537_1003832
314 Ga0055536_1002264
315 Ga0065165_1010375
316 Ga0065707_10081792
317 Ga0070658_10000055
318 Ga0070658_10002097
319 Ga0070658_10093452
320 Ga0070676_10005948
321 Ga0070690_100000008
322 Ga0070670_100107539
323 Ga0068869_100000246
324 Ga0070666_10000032
325 Ga0070666_10087623
326 Ga0068868_100002777
327 Ga0070660_100000667
328 Ga0070660_100034420
329 Ga0070660_100155430
330 Ga0070668_100178106
331 Ga0070669_100000211
332 Ga0070675_100004619
333 Ga0070671_100013761
334 Ga0070671_100030717
335 Ga0070671_100041181
336 Ga0070674_100011603
337 Ga0070673_100000010
338 Ga0070673_100870937
339 Ga0070688_100000278
340 Ga0070659_100029396
341 Ga0070659_100660184
342 Ga0070663_100040044
343 Ga0070663_100167718
344 Ga0070678_100002795
345 Ga0070662_100010013
346 Ga0070662_100031831
347 Ga0070662_100107554
348 Ga0070662_100111910
349 Ga0070662_100317514
350 Ga0070662_100356241
351 Ga0068867_100000019
352 Ga0070685_10001896
353 Ga0068853_100121013
354 Ga0068853_100619693
355 Ga0068853_100678652
356 Ga0070686_100000030
357 Ga0070665_100000056
358 Ga0070665_100473513
359 Ga0068855_100285372
360 Ga0070664_100209712
361 Ga0068857_100014640
362 Ga0068857_100607180
363 Ga0068857_100607181
364 Ga0068856_100011034
365 Ga0068856_100189160
366 Ga0068852_100001788
367 Ga0068852_100585038
368 Ga0068864_100064614
369 Ga0068851_10019481
370 Ga0068863_100000065
371 Ga0068858_100020293
372 Ga0068860_100000132
373 Ga0068862_100000356
374 Ga0075366_10424886
375 Ga0068865_100000058
376 Ga0105240_10211482
377 Ga0105245_10000908
378 Ga0105247_10018446
379 Ga0105243_10000296
380 Ga0105241_10193677
381 Ga0105242_10000215
382 Ga0105248_10145423
383 Ga0105238_10131644
384 Ga0105238_10688944
385 Ga0105249_10000109
386 Ga0105239_10081418
387 Ga0105239_10255813
388 Ga0105239_10362392
389 Ga0157370_10000176
390 Ga0157370_10025690
391 Ga0157369_10005408
392 Ga0157369_10015636
393 Ga0157369_10295434
394 Ga0157374_10000714
395 Ga0157372_10007833
396 Ga0157372_10335594
397 Ga0157375_10000769
398 Ga0163163_10152520
399 Ga0157380_10001148
400 Ga0157380_10011014
401 Ga0157377_10127127
402 Ga0157376_10000061
403 Ga0163161_10000084
404 Ga0207427_100552
405 Ga0209026_1004764
406 Ga0209148_1000114
407 Ga0209148_1002505
408 Ga0209233_1000120
409 Ga0209455_1000520
410 Ga0209676_1000343
411 Ga0209050_1012693
412 Ga0209050_1042549
413 Ga0207656_10079005
414 Ga0207680_10000009
415 Ga0207647_10000068
416 Ga0207647_10000766
417 Ga0207647_10005499
418 Ga0207645_10001352
419 Ga0207705_10000066
420 Ga0207705_10000139
421 Ga0207705_10002061
422 Ga0207705_10077227
423 Ga0207705_10321039
424 Ga0207654_10000868
425 Ga0207695_10003070
426 Ga0207695_10276518
427 Ga0207671_10006228
428 Ga0207657_10002257
429 Ga0207657_10010095
430 Ga0207657_10020962
431 Ga0207657_10070970
432 Ga0207657_10117989
433 Ga0207681_10000266
434 Ga0207694_10001544
435 Ga0207694_10025876
436 Ga0207650_10086923
437 Ga0207659_10124527
438 Ga0207644_10012361
439 Ga0207644_10027214
440 Ga0207690_10176601
441 Ga0207690_10179632
442 Ga0207690_10252960
443 Ga0207690_10336934
444 Ga0207690_10547761
445 Ga0207706_10002721
446 Ga0207706_10016684
447 Ga0207706_10103459
448 Ga0207706_10114428
449 Ga0207706_10130157
450 Ga0207706_10322372
451 Ga0207706_10356312
452 Ga0207686_10000358
453 Ga0207709_10000050
454 Ga0207669_10003240
455 Ga0207704_10000051
456 Ga0207691_10397348
457 Ga0207689_10002014
458 Ga0207679_10265038
459 Ga0207667_10007311
460 Ga0207667_10086559
461 Ga0207667_10242792
462 Ga0207651_10000005
463 Ga0207712_10000046
464 Ga0207668_10157571
465 Ga0207658_10004703
466 Ga0207677_10000128
467 Ga0207703_10004380
468 Ga0207639_10015482
469 Ga0207639_10020007
470 Ga0207639_10147542
471 Ga0207639_10523607
472 Ga0207678_10016104
473 Ga0207678_10116627
474 Ga0207702_10001550
475 Ga0207702_10005007
476 Ga0207702_10014573
477 Ga0207641_10000063
478 Ga0207648_10000068
479 Ga0207676_10003249
480 Ga0207674_10015561
481 Ga0207675_100000167
482 Ga0207683_10005360
483 Ga0207698_10001259
484 Ga0207698_10085079
485 Ga0207698_10982784
486 Ga0268266_10000066
487 Ga0268266_10399050
488 Ga0268265_10000129
489 Ga0268264_10000130
490 Ga0307414_10012355
491 Ga0307510_10136429
492 Ga0395899_0018620
493 Ga0395900_0099402
494 Ga0395900_0342127
495 Ga0395901_0374559
496 Ga0439448_0010893
497 Ga0439448_0057994
498 Ga0439450_002490
499 Ga0439455_0009579
500 Ga0439455_0010157
501 Ga0439458_0001707
502 Ga0439458_0024448
503 Ga0466972_0005798
504 Ga0466972_0031712
505 Ga0466965_0015672
506 Ga0466961_0094135
507 Ga0466963_0003170
508 Ga0466964_0039632
509 Ga0466971_0001653
510 Ga0466968_0091439
511 Ga0466970_0038916
512 Ga0466970_0156258
513 Ga0466957_0052273
514 Ga0466960_0001144
515 Ga0466959_0013893
516 Ga0466959_0053362
517 Ga0466958_0028699
518 Ga0466958_0093868
519 Ga0495638_0043626
520 Ga0495583_0000033
521 Ga0495625_0001882
522 Ga0495687_078348
523 Ga0495686_0000053
524 Ga0495686_0000996
525 Ga0495686_0096588
526 Ga0495686_0312913
527 Ga0496101_0411044
528 Ga0496102_0000034
529 Ga0496102_0008605
530 Ga0496103_0000026
531 Ga0496103_0000788
532 Ga0496104_0070843
533 Ga0496105_0238550
534 Ga0496110_0431684
535 Ga0496111_0067613
536 Ga0496116_0000926
537 Ga0496116_0019225
538 Ga0496117_0000072
539 Ga0496117_0009931
540 Ga0496118_0000030
541 Ga0496118_0013625
542 Ga0496118_0050685
543 Ga0496118_0117380
544 Ga0496119_0080863
545 Ga0496120_0086952
546 Ga0496121_0084952
547 Ga0496121_0117885
548 Ga0496122_0035951
549 Ga0496122_0039272
550 Ga0496123_0001812
551 Ga0496123_0087980
552 Ga0496124_0000061
553 Ga0496124_0027892
554 Ga0496124_0159632
555 Ga0496125_0046168
556 Ga0496125_0112024
557 Ga0496126_0545782
558 Ga0495682_0088423
559 Ga0501047_0223477
560 Ga0501241_006129
561 Ga0500643_000248
562 Ga0500566_0066323
563 Ga0500566_0134191
564 Ga0500555_000972
565 Ga0500608_144422
566 Ga0500577_0019833
567 Ga0500577_0101135
568 Ga0500616_0072243
569 Ga0466962_0007522

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF20260

PUA_4

RNA methyltransferase PUA domain

65

112

0.97

PF04452

Methyltrans_RNA

RNA methyltransferase domain

117

275

0.95

Structural Annotation

Top 5 Hits

ID Description Score Start End
5vm8-assembly3.cif.gz_B crystal structure of a ribosomal rna small subunit methyltransferase e from neisseria gonorrhoeae bound to s-adenosyl methionine 0.8994 12 242
3kw2-assembly1.cif.gz_B crystal structure of probable rrna-methyltransferase from porphyromonas gingivalis 0.8978 13 245
4j3c-assembly1.cif.gz_A crystal structure of 16s ribosomal rna methyltransferase rsme 0.8858 12 241
5vm8-assembly3.cif.gz_A crystal structure of a ribosomal rna small subunit methyltransferase e from neisseria gonorrhoeae bound to s-adenosyl methionine 0.8812 12 241
4j3c-assembly1.cif.gz_B crystal structure of 16s ribosomal rna methyltransferase rsme 0.8789 12 245
ID Description Score Start End Superfamily
1vhyA01 Mainly Beta;Beta Barrel;Ribosomal Protein L25; Chain P;Hypothetical PUA domain-like; domain 1 0.9104 13 77 2.40.240.20
5vm8B02 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.8927 81 242 3.40.1280.10
4j3cB02 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.8895 82 245 3.40.1280.10
af_Q2FXZ5_1_71_2.40.240.20 Mainly Beta;Beta Barrel;Ribosomal Protein L25; Chain P;Hypothetical PUA domain-like; domain 1 0.8844 12 80 2.40.240.20
4j3cB02 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.8792 82 245 3.40.1280.10
ID Description Score Start End GO Terms
AF-A0A1V5LE50-F1-model_v4 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193) 0.9548 12 242 GO:0005737
GO:0070042
GO:0070475
AF-A0A2P2EAI5-F1-model_v4 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193) 0.9542 10 245 GO:0005737
GO:0070042
GO:0070475
AF-A0A2E5V0I1-F1-model_v4 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193) 0.9541 12 241 GO:0005737
GO:0070042
GO:0070475
AF-A0A326GEC7-F1-model_v4 Ribosomal RNA small subunit methyltransferase E (EC 2.1.1.193) 0.9539 1 240 GO:0005737
GO:0070042
GO:0070475
AF-A0A561HY37-F1-model_v4 deleted 0.9522 1 247

Map