F386171

General Info

Members Datasets Scaffolds Average Seq Length
284 192 284 422

Family's Representative Sequence

Representative Sequence 3300009177|Ga0105248_10353873|Ga0105248_103538732
Length 471
Sequence MADPQHGLLSAQTRSSSNTTFLLLPHIDVGTNKKGRGEMIKAPIQLQDLRRRLYVKAKTEPSWRFWGLYVHVCKRETLREAYRLAKANDGAPGIDGVTFESVEANGVEGFLEQLRQELVERTYRPERLRKVEIPKDGGKVRQLSIPSIRDRVIQGALKLILEPIFEADFQPGSFGYRPKKTAHTAIQRVSTAILEGKTYVIDLDLRSYFDTIRHHIVLEKVARRVNDPEVLWLLRRMLRASGKQGVPQGSVISPLLSNIYLNEVDQMLERAKRVTQDQWTYVEYARFADDMVILVSSHRRQQWLRRAVEKRIREELAKLEVEVNEEKSRKVDLEHGGSFGFLGFEFRRIRSRQGRWMPLRIPKLKKRTALLGTLRMVFRRFQSQPVSRLIEQINPILRGWVNYFAMGHSSRCFAFIRDWVEQKIRSHLARACQRRGFGWKRWNREWLYETLGLFNQYRVSYRPSPTAVPIP

Samples

Sample ID Description Type Environment
1 3300002070 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4 Metagenome Rhizosphere
2 3300002244 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M1 Metagenome Rhizosphere
3 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
4 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
5 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
6 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
7 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
8 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
9 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
12 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
13 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
14 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
15 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
16 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
17 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
18 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
19 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
20 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
21 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
22 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
23 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
24 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
25 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
26 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
27 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
28 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
29 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
30 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
31 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
32 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
33 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
34 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
35 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
36 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
37 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
38 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
39 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
40 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
41 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
42 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
43 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
44 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
45 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
46 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
47 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
48 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
54 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
55 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
58 3300010159 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3 Metagenome Rhizosphere
59 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
60 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
61 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
62 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
63 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
64 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
65 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
66 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
67 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
68 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027512 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
87 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
88 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
89 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
90 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
91 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
92 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
93 3300034957 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_2 Metagenome Rhizosphere
94 3300035083 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_17 Metagenome Rhizosphere
95 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
96 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
97 3300035118 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_2 Metagenome Rhizosphere
98 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
99 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
100 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
101 3300035410 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_12 Metagenome Rhizosphere
102 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
103 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
104 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
105 3300035724 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_1 Metagenome Rhizosphere
106 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
107 3300036647 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J_170502JArCrA Metagenome Rhizosphere
108 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
109 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
110 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
111 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
112 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
113 3300037588 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_160517rA Metagenome Rhizosphere
114 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
115 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
116 3300038725 Seagrass microbial communities from Seahorse Key, FL, USA - HV0818 Metagenome Unclassified
117 3300039093 Seagrass microbial communities from Seahorse Key, FL, USA - TH0818 Metagenome Unclassified
118 3300039110 Seagrass microbial communities from Seahorse Key, FL, USA - SV0319 Metagenome Unclassified
119 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
120 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
121 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
122 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
123 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
124 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
125 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
126 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
127 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
128 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
129 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
130 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
131 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
132 3300046475 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL1_31_22 rhizosphere Metagenome Rhizosphere
133 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
134 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
135 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
136 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
137 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
138 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
139 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
140 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
141 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
142 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
143 3300046528 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co1_24_3 rhizosphere Metagenome Rhizosphere
144 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
145 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
146 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
147 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
148 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
149 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
150 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
151 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
152 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
153 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
154 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
155 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
156 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
157 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
158 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
159 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
160 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
161 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
162 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
163 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
164 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
165 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
166 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
167 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
168 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
169 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
170 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
171 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
172 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
173 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
174 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
175 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
176 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
177 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
178 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
179 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
180 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
181 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
182 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
183 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
184 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
185 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
186 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
187 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
188 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
189 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
190 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
191 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
192 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.63
Nodule 0
Rhizoplane 4.23
Rhizosphere 87.32
Stem 0
Stem Tuber 0
Unclassified 2.82

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24750J21931_1002680 3300002070 Bacteria 2136
2 JGI24742J22300_10015112 3300002244 Bacteria 1298
3 JGI25405J52794_10005471 3300003911 Bacteria 2291
4 Ga0070682_100028024 3300005337 Bacteria 3385
5 Ga0070682_100059321 3300005337 Bacteria 2417
6 Ga0070689_100121590 3300005340 Bacteria 2086
7 Ga0070669_100059408 3300005353 Bacteria 2807
8 Ga0070675_100094200 3300005354 Bacteria 2512
9 Ga0070675_100161096 3300005354 Bacteria 1929
10 Ga0070674_100077672 3300005356 Bacteria 2364
11 Ga0070709_10104090 3300005434 Bacteria 1896
12 Ga0070709_10113297 3300005434 Bacteria 1826
13 Ga0070714_100246598 3300005435 Bacteria 1650
14 Ga0070711_100099979 3300005439 Bacteria 2108
15 Ga0070711_100126211 3300005439 Bacteria 1900
16 Ga0070708_100054137 3300005445 Bacteria 3563
17 Ga0070708_100055028 3300005445 Bacteria 3537
18 Ga0070678_100149038 3300005456 Bacteria 1882
19 Ga0068867_100102035 3300005459 Bacteria 2192
20 Ga0070706_100126875 3300005467 Bacteria 2380
21 Ga0070707_100049805 3300005468 Bacteria 4015
22 Ga0070707_100116959 3300005468 Bacteria 2588
23 Ga0070707_100125701 3300005468 Bacteria 2491
24 Ga0070707_100232420 3300005468 Bacteria 1795
25 Ga0070698_100031422 3300005471 Bacteria 5505
26 Ga0070699_100025000 3300005518 Bacteria 5149
27 Ga0070697_100110794 3300005536 Bacteria 2287
28 Ga0070672_100154620 3300005543 Bacteria 1899
29 Ga0070704_100069465 3300005549 Bacteria 2552
30 Ga0070664_100180219 3300005564 Bacteria 1877
31 Ga0070702_100094355 3300005615 Bacteria 1822
32 Ga0068859_100147612 3300005617 Bacteria 2427
33 Ga0068859_100155797 3300005617 Bacteria 2361
34 Ga0068864_100042328 3300005618 Bacteria 3898
35 Ga0068864_100084291 3300005618 Bacteria 2792
36 Ga0068851_10081708 3300005834 Bacteria 1689
37 Ga0068863_100057972 3300005841 Bacteria 3665
38 Ga0068863_100234297 3300005841 Bacteria 1771
39 Ga0068862_100201542 3300005844 Bacteria 1794
40 Ga0081455_10097489 3300005937 Bacteria 2369
41 Ga0081455_10105133 3300005937 Bacteria 2257
42 Ga0070717_10131486 3300006028 Bacteria 2153
43 Ga0075365_10047587 3300006038 Bacteria 2819
44 Ga0075363_100077999 3300006048 Bacteria 1808
45 Ga0075364_10007632 3300006051 Bacteria 6432
46 Ga0070715_10006182 3300006163 Bacteria 4054
47 Ga0075362_10033324 3300006177 Bacteria 2240
48 Ga0075367_10020750 3300006178 Bacteria 3664
49 Ga0075366_10023038 3300006195 Bacteria 3627
50 Ga0075366_10126582 3300006195 Bacteria 1541
51 Ga0075370_10032366 3300006353 Bacteria 2923
52 Ga0075428_100041887 3300006844 Bacteria 5035
53 Ga0075428_100062882 3300006844 Bacteria 4063
54 Ga0075428_100065107 3300006844 Bacteria 3992
55 Ga0075430_100104665 3300006846 Unclassified 2362
56 Ga0075430_100183262 3300006846 Bacteria 1741
57 Ga0075430_100252095 3300006846 Bacteria 1462
58 Ga0075431_100065199 3300006847 Bacteria 3760
59 Ga0075431_100204104 3300006847 Unclassified 2021
60 Ga0075433_10108121 3300006852 Bacteria 2467
61 Ga0075433_10231749 3300006852 Bacteria 1640
62 Ga0075433_10232489 3300006852 Bacteria 1637
63 Ga0075433_10233521 3300006852 Bacteria 1633
64 Ga0075434_100014555 3300006871 Bacteria 7523
65 Ga0075434_100216357 3300006871 Bacteria 1936
66 Ga0075429_100082198 3300006880 Bacteria 2808
67 Ga0075436_100116284 3300006914 Bacteria 1869
68 Ga0097620_100147618 3300006931 Bacteria 2427
69 Ga0097620_100155795 3300006931 Bacteria 2361
70 Ga0075435_100039840 3300007076 Bacteria 3750
71 Ga0075435_100042686 3300007076 Bacteria 3628
72 Ga0075435_100092117 3300007076 Bacteria 2502
73 Ga0075435_100120056 3300007076 Bacteria 2193
74 Ga0099795_10026022 3300007788 Bacteria 1967
75 Ga0099795_10037696 3300007788 Bacteria 1703
76 Ga0111539_10158538 3300009094 Bacteria 2648
77 Ga0111539_10283345 3300009094 Bacteria 1928
78 Ga0105245_10161430 3300009098 Bacteria 2127
79 Ga0114129_10102419 3300009147 Bacteria 3960
80 Ga0114129_10200636 3300009147 Bacteria 2702
81 Ga0114129_10421441 3300009147 Unclassified 1755
82 Ga0114129_10428401 3300009147 Bacteria 1739
83 Ga0105243_10170578 3300009148 Bacteria 1884
84 Ga0105241_10133990 3300009174 Bacteria 2009
85 Ga0105241_10285580 3300009174 Bacteria 1411
86 Ga0105242_10118925 3300009176 Bacteria 2264
87 Ga0105242_10137769 3300009176 Bacteria 2114
88 Ga0105248_10353873 3300009177 Bacteria 1653
89 Ga0105237_10252695 3300009545 Bacteria 1765
90 Ga0105237_10388512 3300009545 Bacteria 1400
91 Ga0105249_10200933 3300009553 Bacteria 1950
92 Ga0105249_10214500 3300009553 Bacteria 1891
93 Ga0099796_10003836 3300010159 Bacteria 3550
94 Ga0105239_10276482 3300010375 Bacteria 1890
95 Ga0105239_10400311 3300010375 Unclassified 1554
96 Ga0157374_10153542 3300013296 Bacteria 2240
97 Ga0157374_10156494 3300013296 Bacteria 2218
98 Ga0157378_10184271 3300013297 Bacteria 1965
99 Ga0163162_10169827 3300013306 Bacteria 2306
100 Ga0163162_10174226 3300013306 Bacteria 2276
101 Ga0163162_10326241 3300013306 Bacteria 1667
102 Ga0157375_10237422 3300013308 Bacteria 1982
103 Ga0157379_10023674 3300014968 Bacteria 5451
104 Ga0163161_10097548 3300017792 Bacteria 2183
105 Ga0163161_10148303 3300017792 Unclassified 1781
106 Ga0213875_10047685 3300021388 Bacteria 2010
107 Ga0209026_1002930 3300025250 Bacteria 5966
108 Ga0207692_10051370 3300025898 Bacteria 2090
109 Ga0207685_10023491 3300025905 Bacteria 2100
110 Ga0207685_10024682 3300025905 Bacteria 2065
111 Ga0207684_10015043 3300025910 Bacteria 6661
112 Ga0207684_10108920 3300025910 Bacteria 2371
113 Ga0207671_10019716 3300025914 Bacteria 5150
114 Ga0207663_10136937 3300025916 Bacteria 1701
115 Ga0207646_10108009 3300025922 Bacteria 2496
116 Ga0207646_10213539 3300025922 Bacteria 1743
117 Ga0207659_10066701 3300025926 Bacteria 2612
118 Ga0207659_10159720 3300025926 Bacteria 1768
119 Ga0207644_10048079 3300025931 Bacteria 3047
120 Ga0207691_10151089 3300025940 Bacteria 2042
121 Ga0207711_10155503 3300025941 Bacteria 2066
122 Ga0207679_10160455 3300025945 Bacteria 1840
123 Ga0207703_10099758 3300026035 Bacteria 2459
124 Ga0207702_10070437 3300026078 Bacteria 3007
125 Ga0207641_10064820 3300026088 Bacteria 3123
126 Ga0207641_10070640 3300026088 Bacteria 3000
127 Ga0207676_10113784 3300026095 Bacteria 2269
128 Ga0207683_10085350 3300026121 Bacteria 2806
129 Ga0209179_1001995 3300027512 Bacteria 2658
130 Ga0209588_1003575 3300027671 Bacteria 4317
131 Ga0209813_10008058 3300027866 Bacteria 2649
132 Ga0207428_10000151 3300027907 Bacteria 94421
133 Ga0265338_10147949 3300028800 Unclassified 1829
134 Ga0316576_10106314 3300031727 Bacteria 2101
135 Ga0316578_10081427 3300031728 Bacteria 1926
136 Ga0316577_10044224 3300031733 Bacteria 2491
137 Ga0373959_0006301 3300034820 Bacteria 1965
138 Ga0373938_0005250 3300034957 Bacteria 2196
139 Ga0373926_0015590 3300035083 Bacteria 2591
140 Ga0373926_0020938 3300035083 Bacteria 2261
141 Ga0373926_0037979 3300035083 Bacteria 1714
142 Ga0373923_0089218 3300035111 Bacteria 1346
143 Ga0373936_0025440 3300035113 Bacteria 2314
144 Ga0373954_0038912 3300035118 Bacteria 2213
145 Ga0373943_0038268 3300035170 Bacteria 2305
146 Ga0373943_0096725 3300035170 Bacteria 1538
147 Ga0373955_0058348 3300035172 Bacteria 2123
148 Ga0373955_0065944 3300035172 Bacteria 2011
149 Ga0316574_0060303 3300035398 Bacteria 2381
150 Ga0373924_0033448 3300035410 Bacteria 2076
151 Ga0373931_0060658 3300035691 Bacteria 2037
152 Ga0373935_0164431 3300035692 Bacteria 1514
153 Ga0373935_0172916 3300035692 Bacteria 1479
154 Ga0373927_0083636 3300035695 Bacteria 2069
155 Ga0373927_0148466 3300035695 Bacteria 1535
156 Ga0373933_0006647 3300035724 Bacteria 6298
157 Ga0373933_0066776 3300035724 Bacteria 2180
158 Ga0373937_0261986 3300036401 Bacteria 1630
159 Ga0316582_0051953 3300036647 Bacteria 2603
160 Ga0373925_0050605 3300037068 Bacteria 3099
161 Ga0395899_0072771 3300037312 Bacteria 2515
162 Ga0395900_0066875 3300037418 Bacteria 3693
163 Ga0395900_0363835 3300037418 Bacteria 1417
164 Ga0395898_0149649 3300037466 Bacteria 2234
165 Ga0395898_0292080 3300037466 Bacteria 1555
166 Ga0395905_0031696 3300037471 Bacteria 4973
167 Ga0395905_0055513 3300037471 Bacteria 3706
168 Ga0316581_0028048 3300037588 Bacteria 1686
169 Ga0436364_0725784 3300037853 Bacteria 2196
170 Ga0395901_0198651 3300038443 Bacteria 2102
171 Ga0400484_12027 3300038725 Bacteria 2216
172 Ga0400489_20113 3300039093 Bacteria 2280
173 Ga0400487_66559 3300039110 Bacteria 2495
174 Ga0436360_1376491 3300039438 Bacteria 2104
175 Ga0436361_0692013 3300039447 Bacteria 2518
176 Ga0436363_1257545 3300039450 Bacteria 2150
177 Ga0436363_1665326 3300039450 Bacteria 1736
178 Ga0453683_0012756 3300044673 Bacteria 5502
179 Ga0453683_0107248 3300044673 Bacteria 1756
180 Ga0453684_0218871 3300044712 Bacteria 2207
181 Ga0466968_0025278 3300044735 Bacteria 2431
182 Ga0466959_0074903 3300045049 Bacteria 2447
183 Ga0451576_0098356 3300045051 Bacteria 3043
184 Ga0451576_0112559 3300045051 Bacteria 2833
185 Ga0495592_0158640 3300046454 Bacteria 1558
186 Ga0495629_0103378 3300046459 Bacteria 1987
187 Ga0495629_0155837 3300046459 Bacteria 1587
188 Ga0495629_0173933 3300046459 Bacteria 1493
189 Ga0495641_0075875 3300046461 Bacteria 1507
190 Ga0495580_0066580 3300046472 Bacteria 2521
191 Ga0495580_0074540 3300046472 Bacteria 2368
192 Ga0495580_0118991 3300046472 Bacteria 1834
193 Ga0495582_0040219 3300046473 Bacteria 2574
194 Ga0495639_0089604 3300046475 Bacteria 1442
195 Ga0495639_0092096 3300046475 Bacteria 1423
196 Ga0495662_0045179 3300046476 Bacteria 2126
197 Ga0495662_0069538 3300046476 Bacteria 1705
198 Ga0495662_0117248 3300046476 Bacteria 1306
199 Ga0495664_0010152 3300046477 Bacteria 5283
200 Ga0495585_0079135 3300046492 Bacteria 1783
201 Ga0495594_0155237 3300046499 Bacteria 1300
202 Ga0495596_0073853 3300046500 Bacteria 1324
203 Ga0495608_0092020 3300046511 Bacteria 1960
204 Ga0495618_0047460 3300046514 Bacteria 2711
205 Ga0495618_0075213 3300046514 Bacteria 2151
206 Ga0495628_0145602 3300046516 Bacteria 1806
207 Ga0495630_0036330 3300046517 Bacteria 3684
208 Ga0495663_0048729 3300046525 Bacteria 1307
209 Ga0495642_0013861 3300046528 Bacteria 3121
210 Ga0495665_0058489 3300046531 Bacteria 2035
211 Ga0495640_0135664 3300046533 Bacteria 1589
212 Ga0495586_0078416 3300046535 Bacteria 1812
213 Ga0495598_0007636 3300046537 Bacteria 2488
214 Ga0495598_0014495 3300046537 Bacteria 1973
215 Ga0495633_0076708 3300046558 Bacteria 1556
216 Ga0495667_0131625 3300046559 Bacteria 1613
217 Ga0495634_0084583 3300046642 Bacteria 2068
218 Ga0495635_0124887 3300046663 Bacteria 1755
219 Ga0495659_0034607 3300046664 Bacteria 1777
220 Ga0495588_0041436 3300046674 Bacteria 2351
221 Ga0495658_0020852 3300046683 Bacteria 3447
222 Ga0495658_0032910 3300046683 Bacteria 2834
223 Ga0495669_0075848 3300046684 Bacteria 1538
224 Ga0495613_0067690 3300046689 Bacteria 2606
225 Ga0495589_0113264 3300046794 Bacteria 1309
226 Ga0495600_0143090 3300046809 Bacteria 1551
227 Ga0495581_0067226 3300047315 Bacteria 2072
228 Ga0495674_0086079 3300047319 Bacteria 2691
229 Ga0495674_0152641 3300047319 Bacteria 1936
230 Ga0495679_022889 3300047446 Bacteria 2130
231 Ga0495684_0068225 3300047471 Bacteria 2704
232 Ga0495684_0245234 3300047471 Unclassified 1305
233 Ga0495593_0056241 3300047673 Bacteria 2068
234 Ga0495593_0096463 3300047673 Bacteria 1519
235 Ga0495614_0019444 3300048089 Bacteria 2938
236 Ga0495614_0049305 3300048089 Bacteria 1805
237 Ga0495614_0054792 3300048089 Bacteria 1711
238 Ga0496100_0075814 3300048903 Bacteria 2256
239 Ga0496102_0100569 3300048905 Bacteria 2685
240 Ga0496102_0228535 3300048905 Bacteria 1754
241 Ga0496103_0092360 3300048906 Bacteria 1910
242 Ga0496104_0080620 3300048907 Bacteria 3103
243 Ga0496105_0133749 3300048908 Bacteria 2043
244 Ga0496106_0114001 3300048909 Bacteria 2107
245 Ga0496107_0097591 3300048910 Bacteria 2151
246 Ga0496114_0127769 3300048917 Bacteria 2192
247 Ga0496114_0135603 3300048917 Bacteria 2128
248 Ga0496115_0116703 3300048918 Bacteria 2195
249 Ga0496115_0208696 3300048918 Unclassified 1613
250 nmdc:mga03683_13653_c1 3300050489 Bacteria 2994
251 nmdc:mga00v17_5877_c1 3300050491 Bacteria 6480
252 nmdc:mga0k408_144303_c1 3300050493 Bacteria 1417
253 nmdc:mga06z11_4547_c1 3300050494 Bacteria 5465
254 nmdc:mga04h51_13651_c1 3300050495 Bacteria 2304
255 nmdc:mga07m45_11465_c1 3300050496 Bacteria 4657
256 nmdc:mga05p37_166609_c1 3300050507 Bacteria 2689
257 nmdc:mga05p37_268908_c1 3300050507 Bacteria 2038
258 nmdc:mga05p37_276304_c1 3300050507 Bacteria 2005
259 nmdc:mga05p37_82113_c1 3300050507 Bacteria 3971
260 nmdc:mga09592_140051_c1 3300050508 Bacteria 2085
261 nmdc:mga09592_86271_c1 3300050508 Bacteria 2678
262 nmdc:mga0qj67_21082_c1 3300050509 Bacteria 4996
263 nmdc:mga0qj67_90833_c1 3300050509 Unclassified 2454
264 nmdc:mga06r32_169356_c1 3300050510 Bacteria 2168
265 nmdc:mga06r32_49149_c1 3300050510 Bacteria 4033
266 nmdc:mga08y16_5502_c1 3300050511 Bacteria 13247
267 nmdc:mga0n895_178246_c1 3300050512 Bacteria 2156
268 nmdc:mga0n895_190363_c1 3300050512 Bacteria 2083
269 nmdc:mga0n895_75535_c1 3300050512 Bacteria 3350
270 nmdc:mga0rr50_48401_c1 3300050513 Bacteria 3142
271 nmdc:mga0rr50_73015_c1 3300050513 Bacteria 2622
272 nmdc:mga0rr50_93844_c1 3300050513 Bacteria 2342
273 nmdc:mga08x19_107671_c1 3300050514 Bacteria 1856
274 nmdc:mga08x19_116612_c1 3300050514 Bacteria 1786
275 nmdc:mga0a205_133099_c1 3300050515 Bacteria 2387
276 nmdc:mga0a205_69885_c1 3300050515 Bacteria 3390
277 nmdc:mga0a205_81379_c1 3300050515 Bacteria 3128
278 nmdc:mga0a205_96851_c1 3300050515 Bacteria 1739
279 Ga0495612_0012729 3300053078 Bacteria 3391
280 Ga0495612_0093686 3300053078 Bacteria 1274
281 Ga0495619_0072692 3300053085 Bacteria 2303
282 Ga0495619_0242364 3300053085 Bacteria 1249
283 Ga0500641_0027645 3300053096 Bacteria 2209
284 Ga0530510_0005392 3300061734 Bacteria 8853

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300002244 JGI24742J22300_10015112 JGI24742J22300_100151122 319
2 3300005356 Ga0070674_100077672 Ga0070674_1000776722 319
3 3300046794 Ga0495589_0113264 Ga0495589_0113264_71_1033 320
4 3300009545 Ga0105237_10388512 Ga0105237_103885122 332
5 3300025914 Ga0207671_10019716 Ga0207671_100197166 332
6 3300039447 Ga0436361_0692013 Ga0436361_0692013_1335_2396 352
7 3300044673 Ga0453683_0012756 Ga0453683_0012756_3601_4770 388
8 3300046476 Ga0495662_0117248 Ga0495662_0117248_64_1242 388
9 3300050507 nmdc:mga05p37_166609_c1 nmdc:mga05p37_166609_c1_331_1497 388
10 3300009094 Ga0111539_10158538 Ga0111539_101585383 389
11 3300039093 Ga0400489_20113 Ga0400489_20113_688_1863 390
12 3300039110 Ga0400487_66559 Ga0400487_66559_334_1509 390
13 3300039450 Ga0436363_1665326 Ga0436363_1665326_196_1368 390
14 3300046454 Ga0495592_0158640 Ga0495592_0158640_41_1213 390
15 3300046559 Ga0495667_0131625 Ga0495667_0131625_357_1529 390
16 3300053078 Ga0495612_0012729 Ga0495612_0012729_2166_3338 390
17 3300053085 Ga0495619_0242364 Ga0495619_0242364_20_1192 390
18 3300050515 nmdc:mga0a205_96851_c1 nmdc:mga0a205_96851_c1_258_1445 395
19 3300037466 Ga0395898_0292080 Ga0395898_0292080_79_1269 396
20 3300037471 Ga0395905_0031696 Ga0395905_0031696_3092_4282 396
21 3300037853 Ga0436364_0725784 Ga0436364_0725784_277_1482 396
22 3300046459 Ga0495629_0155837 Ga0495629_0155837_279_1472 396
23 3300046461 Ga0495641_0075875 Ga0495641_0075875_261_1454 396
24 3300046475 Ga0495639_0089604 Ga0495639_0089604_37_1227 396
25 3300046499 Ga0495594_0155237 Ga0495594_0155237_17_1210 396
26 3300046511 Ga0495608_0092020 Ga0495608_0092020_31_1227 396
27 3300046674 Ga0495588_0041436 Ga0495588_0041436_206_1396 396
28 3300047471 Ga0495684_0068225 Ga0495684_0068225_417_1613 396
29 3300048905 Ga0496102_0228535 Ga0496102_0228535_546_1739 396
30 3300050493 nmdc:mga0k408_144303_c1 nmdc:mga0k408_144303_c1_107_1297 396
31 3300005435 Ga0070714_100246598 Ga0070714_1002465981 397
32 3300007788 Ga0099795_10037696 Ga0099795_100376961 397
33 3300009098 Ga0105245_10161430 Ga0105245_101614302 397
34 3300009148 Ga0105243_10170578 Ga0105243_101705781 397
35 3300009176 Ga0105242_10118925 Ga0105242_101189251 397
36 3300009176 Ga0105242_10137769 Ga0105242_101377691 397
37 3300009545 Ga0105237_10252695 Ga0105237_102526951 397
38 3300009553 Ga0105249_10200933 Ga0105249_102009332 397
39 3300009553 Ga0105249_10214500 Ga0105249_102145001 397
40 3300010159 Ga0099796_10003836 Ga0099796_100038362 397
41 3300010375 Ga0105239_10400311 Ga0105239_104003111 397
42 3300013297 Ga0157378_10184271 Ga0157378_101842711 397
43 3300013306 Ga0163162_10174226 Ga0163162_101742261 397
44 3300017792 Ga0163161_10148303 Ga0163161_101483031 397
45 3300034820 Ga0373959_0006301 Ga0373959_0006301_92_1285 397
46 3300035083 Ga0373926_0020938 Ga0373926_0020938_858_2051 397
47 3300035111 Ga0373923_0089218 Ga0373923_0089218_143_1336 397
48 3300035113 Ga0373936_0025440 Ga0373936_0025440_477_1670 397
49 3300035118 Ga0373954_0038912 Ga0373954_0038912_302_1495 397
50 3300035170 Ga0373943_0096725 Ga0373943_0096725_314_1507 397
51 3300035172 Ga0373955_0058348 Ga0373955_0058348_572_1765 397
52 3300035410 Ga0373924_0033448 Ga0373924_0033448_623_1816 397
53 3300035692 Ga0373935_0164431 Ga0373935_0164431_20_1213 397
54 3300035724 Ga0373933_0066776 Ga0373933_0066776_434_1627 397
55 3300036401 Ga0373937_0261986 Ga0373937_0261986_280_1473 397
56 3300046459 Ga0495629_0173933 Ga0495629_0173933_97_1290 397
57 3300046473 Ga0495582_0040219 Ga0495582_0040219_285_1478 397
58 3300046475 Ga0495639_0092096 Ga0495639_0092096_37_1230 397
59 3300046476 Ga0495662_0045179 Ga0495662_0045179_562_1755 397
60 3300046476 Ga0495662_0069538 Ga0495662_0069538_278_1471 397
61 3300046477 Ga0495664_0010152 Ga0495664_0010152_3472_4665 397
62 3300046500 Ga0495596_0073853 Ga0495596_0073853_37_1230 397
63 3300046514 Ga0495618_0047460 Ga0495618_0047460_576_1808 397
64 3300046514 Ga0495618_0075213 Ga0495618_0075213_312_1505 397
65 3300046525 Ga0495663_0048729 Ga0495663_0048729_67_1263 397
66 3300046531 Ga0495665_0058489 Ga0495665_0058489_167_1360 397
67 3300046642 Ga0495634_0084583 Ga0495634_0084583_697_1890 397
68 3300046663 Ga0495635_0124887 Ga0495635_0124887_274_1467 397
69 3300046664 Ga0495659_0034607 Ga0495659_0034607_477_1673 397
70 3300046683 Ga0495658_0020852 Ga0495658_0020852_267_1460 397
71 3300046683 Ga0495658_0032910 Ga0495658_0032910_1196_2389 397
72 3300046689 Ga0495613_0067690 Ga0495613_0067690_282_1475 397
73 3300047315 Ga0495581_0067226 Ga0495581_0067226_189_1382 397
74 3300047319 Ga0495674_0086079 Ga0495674_0086079_719_1912 397
75 3300047673 Ga0495593_0056241 Ga0495593_0056241_218_1411 397
76 3300047673 Ga0495593_0096463 Ga0495593_0096463_15_1208 397
77 3300048089 Ga0495614_0019444 Ga0495614_0019444_1309_2502 397
78 3300048089 Ga0495614_0049305 Ga0495614_0049305_376_1569 397
79 3300048089 Ga0495614_0054792 Ga0495614_0054792_430_1623 397
80 3300048903 Ga0496100_0075814 Ga0496100_0075814_758_1951 397
81 3300048905 Ga0496102_0100569 Ga0496102_0100569_1267_2460 397
82 3300048906 Ga0496103_0092360 Ga0496103_0092360_380_1573 397
83 3300048909 Ga0496106_0114001 Ga0496106_0114001_691_1884 397
84 3300048910 Ga0496107_0097591 Ga0496107_0097591_680_1873 397
85 3300048917 Ga0496114_0127769 Ga0496114_0127769_732_1925 397
86 3300048917 Ga0496114_0135603 Ga0496114_0135603_672_1865 397
87 3300048918 Ga0496115_0116703 Ga0496115_0116703_737_1930 397
88 3300048918 Ga0496115_0208696 Ga0496115_0208696_206_1399 397
89 3300050515 nmdc:mga0a205_69885_c1 nmdc:mga0a205_69885_c1_1936_3129 397
90 3300053078 Ga0495612_0093686 Ga0495612_0093686_22_1215 397
91 3300053085 Ga0495619_0072692 Ga0495619_0072692_362_1594 397
92 3300050507 nmdc:mga05p37_276304_c1 nmdc:mga05p37_276304_c1_549_1763 402
93 3300035692 Ga0373935_0172916 Ga0373935_0172916_29_1246 403
94 3300050509 nmdc:mga0qj67_21082_c1 nmdc:mga0qj67_21082_c1_3254_4471 403
95 3300050512 nmdc:mga0n895_75535_c1 nmdc:mga0n895_75535_c1_1401_2618 403
96 3300050513 nmdc:mga0rr50_48401_c1 nmdc:mga0rr50_48401_c1_1418_2635 403
97 3300050515 nmdc:mga0a205_81379_c1 nmdc:mga0a205_81379_c1_98_1315 403
98 3300009174 Ga0105241_10285580 Ga0105241_102855802 404
99 3300046558 Ga0495633_0076708 Ga0495633_0076708_74_1288 404
100 3300046684 Ga0495669_0075848 Ga0495669_0075848_47_1261 404
101 3300046809 Ga0495600_0143090 Ga0495600_0143090_74_1288 404
102 3300047471 Ga0495684_0245234 Ga0495684_0245234_56_1273 404
103 3300035695 Ga0373927_0083636 Ga0373927_0083636_496_1794 410
104 3300037068 Ga0373925_0050605 Ga0373925_0050605_524_1822 410
105 3300046472 Ga0495580_0066580 Ga0495580_0066580_777_2075 410
106 3300047319 Ga0495674_0152641 Ga0495674_0152641_195_1493 410
107 3300005536 Ga0070697_100110794 Ga0070697_1001107941 412
108 3300038725 Ga0400484_12027 Ga0400484_12027_591_1940 417
109 3300025250 Ga0209026_1002930 Ga0209026_10029304 423
110 3300005468 Ga0070707_100049805 Ga0070707_1000498052 424
111 3300007076 Ga0075435_100042686 Ga0075435_1000426862 424
112 3300046459 Ga0495629_0103378 Ga0495629_0103378_460_1734 424
113 3300046535 Ga0495586_0078416 Ga0495586_0078416_342_1616 424
114 3300050513 nmdc:mga0rr50_73015_c1 nmdc:mga0rr50_73015_c1_247_1521 424
115 3300005445 Ga0070708_100054137 Ga0070708_1000541372 425
116 3300006852 Ga0075433_10231749 Ga0075433_102317491 425
117 3300007076 Ga0075435_100039840 Ga0075435_1000398401 425
118 3300025910 Ga0207684_10015043 Ga0207684_100150436 425
119 3300037312 Ga0395899_0072771 Ga0395899_0072771_456_1733 425
120 3300037418 Ga0395900_0363835 Ga0395900_0363835_25_1302 425
121 3300037466 Ga0395898_0149649 Ga0395898_0149649_496_1773 425
122 3300038443 Ga0395901_0198651 Ga0395901_0198651_488_1765 425
123 3300005439 Ga0070711_100099979 Ga0070711_1000999791 426
124 3300031727 Ga0316576_10106314 Ga0316576_101063141 426
125 3300035083 Ga0373926_0015590 Ga0373926_0015590_244_1524 426
126 3300005467 Ga0070706_100126875 Ga0070706_1001268753 427
127 3300005468 Ga0070707_100232420 Ga0070707_1002324201 427
128 3300009174 Ga0105241_10133990 Ga0105241_101339901 427
129 3300025910 Ga0207684_10108920 Ga0207684_101089202 427
130 3300025922 Ga0207646_10213539 Ga0207646_102135391 427
131 3300027671 Ga0209588_1003575 Ga0209588_10035751 427
132 3300045051 Ga0451576_0112559 Ga0451576_0112559_299_1603 427
133 3300046492 Ga0495585_0079135 Ga0495585_0079135_259_1563 427
134 3300046537 Ga0495598_0014495 Ga0495598_0014495_108_1412 427
135 3300061734 Ga0530510_0005392 Ga0530510_0005392_6015_7319 427
136 3300047446 Ga0495679_022889 Ga0495679_022889_193_1506 429
137 3300035398 Ga0316574_0060303 Ga0316574_0060303_271_1572 431
138 3300039438 Ga0436360_1376491 Ga0436360_1376491_211_1509 431
139 3300005337 Ga0070682_100028024 Ga0070682_1000280243 432
140 3300005337 Ga0070682_100059321 Ga0070682_1000593212 432
141 3300005340 Ga0070689_100121590 Ga0070689_1001215902 432
142 3300005353 Ga0070669_100059408 Ga0070669_1000594082 432
143 3300005354 Ga0070675_100094200 Ga0070675_1000942002 432
144 3300005354 Ga0070675_100161096 Ga0070675_1001610961 432
145 3300005434 Ga0070709_10113297 Ga0070709_101132971 432
146 3300005445 Ga0070708_100055028 Ga0070708_1000550283 432
147 3300005468 Ga0070707_100116959 Ga0070707_1001169592 432
148 3300005471 Ga0070698_100031422 Ga0070698_1000314221 432
149 3300005518 Ga0070699_100025000 Ga0070699_1000250001 432
150 3300005543 Ga0070672_100154620 Ga0070672_1001546202 432
151 3300005564 Ga0070664_100180219 Ga0070664_1001802191 432
152 3300005615 Ga0070702_100094355 Ga0070702_1000943552 432
153 3300005617 Ga0068859_100155797 Ga0068859_1001557972 432
154 3300005618 Ga0068864_100042328 Ga0068864_1000423286 432
155 3300005834 Ga0068851_10081708 Ga0068851_100817081 432
156 3300005841 Ga0068863_100234297 Ga0068863_1002342971 432
157 3300005844 Ga0068862_100201542 Ga0068862_1002015421 432
158 3300006038 Ga0075365_10047587 Ga0075365_100475873 432
159 3300006048 Ga0075363_100077999 Ga0075363_1000779991 432
160 3300006051 Ga0075364_10007632 Ga0075364_100076323 432
161 3300006177 Ga0075362_10033324 Ga0075362_100333242 432
162 3300006178 Ga0075367_10020750 Ga0075367_100207502 432
163 3300006195 Ga0075366_10023038 Ga0075366_100230381 432
164 3300006195 Ga0075366_10126582 Ga0075366_101265822 432
165 3300006353 Ga0075370_10032366 Ga0075370_100323662 432
166 3300006844 Ga0075428_100065107 Ga0075428_1000651072 432
167 3300006852 Ga0075433_10232489 Ga0075433_102324891 432
168 3300006931 Ga0097620_100155795 Ga0097620_1001557952 432
169 3300009094 Ga0111539_10283345 Ga0111539_102833451 432
170 3300009147 Ga0114129_10421441 Ga0114129_104214411 432
171 3300009177 Ga0105248_10353873 Ga0105248_103538732 432
172 3300010375 Ga0105239_10276482 Ga0105239_102764822 432
173 3300013296 Ga0157374_10156494 Ga0157374_101564941 432
174 3300013306 Ga0163162_10169827 Ga0163162_101698272 432
175 3300013306 Ga0163162_10326241 Ga0163162_103262411 432
176 3300013308 Ga0157375_10237422 Ga0157375_102374222 432
177 3300014968 Ga0157379_10023674 Ga0157379_100236743 432
178 3300021388 Ga0213875_10047685 Ga0213875_100476851 432
179 3300025926 Ga0207659_10066701 Ga0207659_100667013 432
180 3300025926 Ga0207659_10159720 Ga0207659_101597201 432
181 3300025940 Ga0207691_10151089 Ga0207691_101510892 432
182 3300025941 Ga0207711_10155503 Ga0207711_101555032 432
183 3300025945 Ga0207679_10160455 Ga0207679_101604551 432
184 3300026035 Ga0207703_10099758 Ga0207703_100997582 432
185 3300026088 Ga0207641_10064820 Ga0207641_100648203 432
186 3300026095 Ga0207676_10113784 Ga0207676_101137842 432
187 3300027866 Ga0209813_10008058 Ga0209813_100080582 432
188 3300027907 Ga0207428_10000151 Ga0207428_1000015178 432
189 3300028800 Ga0265338_10147949 Ga0265338_101479492 432
190 3300031728 Ga0316578_10081427 Ga0316578_100814271 432
191 3300031733 Ga0316577_10044224 Ga0316577_100442242 432
192 3300035691 Ga0373931_0060658 Ga0373931_0060658_580_1881 432
193 3300035695 Ga0373927_0148466 Ga0373927_0148466_173_1495 432
194 3300036647 Ga0316582_0051953 Ga0316582_0051953_594_1898 432
195 3300037418 Ga0395900_0066875 Ga0395900_0066875_1855_3159 432
196 3300037471 Ga0395905_0055513 Ga0395905_0055513_548_1852 432
197 3300037588 Ga0316581_0028048 Ga0316581_0028048_293_1597 432
198 3300039450 Ga0436363_1257545 Ga0436363_1257545_550_1854 432
199 3300046472 Ga0495580_0118991 Ga0495580_0118991_380_1699 432
200 3300046517 Ga0495630_0036330 Ga0495630_0036330_80_1384 432
201 3300050489 nmdc:mga03683_13653_c1 nmdc:mga03683_13653_c1_1158_2471 432
202 3300050491 nmdc:mga00v17_5877_c1 nmdc:mga00v17_5877_c1_3966_5279 432
203 3300050494 nmdc:mga06z11_4547_c1 nmdc:mga06z11_4547_c1_3348_4661 432
204 3300050495 nmdc:mga04h51_13651_c1 nmdc:mga04h51_13651_c1_772_2085 432
205 3300050496 nmdc:mga07m45_11465_c1 nmdc:mga07m45_11465_c1_2462_3775 432
206 3300050508 nmdc:mga09592_86271_c1 nmdc:mga09592_86271_c1_346_1659 432
207 3300050511 nmdc:mga08y16_5502_c1 nmdc:mga08y16_5502_c1_6781_8094 432
208 3300002070 JGI24750J21931_1002680 JGI24750J21931_10026802 433
209 3300003911 JGI25405J52794_10005471 JGI25405J52794_100054711 433
210 3300005434 Ga0070709_10104090 Ga0070709_101040901 433
211 3300005439 Ga0070711_100126211 Ga0070711_1001262111 433
212 3300005456 Ga0070678_100149038 Ga0070678_1001490381 433
213 3300005459 Ga0068867_100102035 Ga0068867_1001020352 433
214 3300005468 Ga0070707_100125701 Ga0070707_1001257011 433
215 3300005549 Ga0070704_100069465 Ga0070704_1000694652 433
216 3300005617 Ga0068859_100147612 Ga0068859_1001476122 433
217 3300005618 Ga0068864_100084291 Ga0068864_1000842911 433
218 3300005841 Ga0068863_100057972 Ga0068863_1000579725 433
219 3300005937 Ga0081455_10097489 Ga0081455_100974891 433
220 3300005937 Ga0081455_10105133 Ga0081455_101051331 433
221 3300006028 Ga0070717_10131486 Ga0070717_101314863 433
222 3300006163 Ga0070715_10006182 Ga0070715_100061821 433
223 3300006844 Ga0075428_100041887 Ga0075428_1000418872 433
224 3300006844 Ga0075428_100062882 Ga0075428_1000628821 433
225 3300006846 Ga0075430_100104665 Ga0075430_1001046653 433
226 3300006846 Ga0075430_100183262 Ga0075430_1001832621 433
227 3300006846 Ga0075430_100252095 Ga0075430_1002520951 433
228 3300006847 Ga0075431_100065199 Ga0075431_1000651993 433
229 3300006847 Ga0075431_100204104 Ga0075431_1002041042 433
230 3300006852 Ga0075433_10108121 Ga0075433_101081212 433
231 3300006852 Ga0075433_10233521 Ga0075433_102335212 433
232 3300006871 Ga0075434_100014555 Ga0075434_1000145557 433
233 3300006871 Ga0075434_100216357 Ga0075434_1002163571 433
234 3300006880 Ga0075429_100082198 Ga0075429_1000821983 433
235 3300006914 Ga0075436_100116284 Ga0075436_1001162841 433
236 3300006931 Ga0097620_100147618 Ga0097620_1001476181 433
237 3300007076 Ga0075435_100092117 Ga0075435_1000921172 433
238 3300007076 Ga0075435_100120056 Ga0075435_1001200564 433
239 3300007788 Ga0099795_10026022 Ga0099795_100260221 433
240 3300009147 Ga0114129_10102419 Ga0114129_101024194 433
241 3300009147 Ga0114129_10200636 Ga0114129_102006361 433
242 3300009147 Ga0114129_10428401 Ga0114129_104284011 433
243 3300013296 Ga0157374_10153542 Ga0157374_101535423 433
244 3300017792 Ga0163161_10097548 Ga0163161_100975481 433
245 3300025898 Ga0207692_10051370 Ga0207692_100513701 433
246 3300025905 Ga0207685_10023491 Ga0207685_100234911 433
247 3300025905 Ga0207685_10024682 Ga0207685_100246822 433
248 3300025916 Ga0207663_10136937 Ga0207663_101369371 433
249 3300025922 Ga0207646_10108009 Ga0207646_101080091 433
250 3300025931 Ga0207644_10048079 Ga0207644_100480792 433
251 3300026078 Ga0207702_10070437 Ga0207702_100704372 433
252 3300026088 Ga0207641_10070640 Ga0207641_100706401 433
253 3300026121 Ga0207683_10085350 Ga0207683_100853501 433
254 3300027512 Ga0209179_1001995 Ga0209179_10019953 433
255 3300034957 Ga0373938_0005250 Ga0373938_0005250_643_1944 433
256 3300035083 Ga0373926_0037979 Ga0373926_0037979_299_1615 433
257 3300035170 Ga0373943_0038268 Ga0373943_0038268_602_1969 433
258 3300035172 Ga0373955_0065944 Ga0373955_0065944_380_1747 433
259 3300035724 Ga0373933_0006647 Ga0373933_0006647_187_1488 433
260 3300044673 Ga0453683_0107248 Ga0453683_0107248_195_1502 433
261 3300044712 Ga0453684_0218871 Ga0453684_0218871_606_1913 433
262 3300044735 Ga0466968_0025278 Ga0466968_0025278_873_2189 433
263 3300045049 Ga0466959_0074903 Ga0466959_0074903_673_1989 433
264 3300045051 Ga0451576_0098356 Ga0451576_0098356_1440_2747 433
265 3300046472 Ga0495580_0074540 Ga0495580_0074540_418_1719 433
266 3300046516 Ga0495628_0145602 Ga0495628_0145602_115_1482 433
267 3300046528 Ga0495642_0013861 Ga0495642_0013861_1139_2440 433
268 3300046533 Ga0495640_0135664 Ga0495640_0135664_120_1487 433
269 3300046537 Ga0495598_0007636 Ga0495598_0007636_465_1796 433
270 3300048907 Ga0496104_0080620 Ga0496104_0080620_1604_2914 433
271 3300048908 Ga0496105_0133749 Ga0496105_0133749_238_1548 433
272 3300050507 nmdc:mga05p37_268908_c1 nmdc:mga05p37_268908_c1_561_1868 433
273 3300050507 nmdc:mga05p37_82113_c1 nmdc:mga05p37_82113_c1_2254_3621 433
274 3300050508 nmdc:mga09592_140051_c1 nmdc:mga09592_140051_c1_576_1883 433
275 3300050509 nmdc:mga0qj67_90833_c1 nmdc:mga0qj67_90833_c1_731_2125 433
276 3300050510 nmdc:mga06r32_169356_c1 nmdc:mga06r32_169356_c1_668_1975 433
277 3300050510 nmdc:mga06r32_49149_c1 nmdc:mga06r32_49149_c1_1578_2972 433
278 3300050512 nmdc:mga0n895_178246_c1 nmdc:mga0n895_178246_c1_534_1844 433
279 3300050512 nmdc:mga0n895_190363_c1 nmdc:mga0n895_190363_c1_574_1881 433
280 3300050513 nmdc:mga0rr50_93844_c1 nmdc:mga0rr50_93844_c1_514_1824 433
281 3300050514 nmdc:mga08x19_107671_c1 nmdc:mga08x19_107671_c1_64_1374 433
282 3300050514 nmdc:mga08x19_116612_c1 nmdc:mga08x19_116612_c1_340_1713 433
283 3300050515 nmdc:mga0a205_133099_c1 nmdc:mga0a205_133099_c1_237_1544 433
284 3300053096 Ga0500641_0027645 Ga0500641_0027645_257_1633 433

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00078

RVT_1

Reverse transcriptase (RNA-dependent DNA polymerase)

133

346

0.88

PF08388

GIIM

Group II intron, maturase-specific domain

367

446

0.88

Structural Annotation

Top 5 Hits

ID Description Score Start End
8t2r-assembly1.cif.gz_D structure of a group ii intron ribonucleoprotein in the pre-ligation (pre-2f) state 0.8957 30 393
7uin-assembly1.cif.gz_D cryoem structure of an group ii intron retroelement 0.8857 29 393
8bgj-assembly2.cif.gz_B crystal structure of reverse transcriptase domain from caloramator australicus cart-capp 0.8819 103 308
8bgj-assembly3.cif.gz_C crystal structure of reverse transcriptase domain from caloramator australicus cart-capp 0.8691 91 308
5irg-assembly2.cif.gz_C reverse transcriptase domain of group ii intron maturase from roseburia intestinalis in p212121 space group 0.8591 29 325
ID Description Score Start End Superfamily
af_P05511_299_561_3.20.20.210 Alpha Beta;Alpha-Beta Barrel;TIM Barrel; 0.8664 95 304 3.20.20.210
af_Q47688_90_332_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.863 95 302 3.30.70.270
af_Q54BA4_491_738_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.8297 95 294 3.30.70.270
af_A0A0G2KTU9_518_768_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.8182 95 308 3.30.70.270
af_A0A0G2L3N0_331_584_3.30.70.270 Alpha Beta;2-Layer Sandwich;Alpha-Beta Plaits;Reverse transcriptase/Diguanylate cyclase domain 0.8174 95 308 3.30.70.270
ID Description Score Start End GO Terms
AF-A0A2C1ACC5-F1-model_v4 deleted 0.9846 26 260
AF-A0A2C1ACC5-F1-model_v4 deleted 0.9805 26 260
AF-K1SNR9-F1-model_v4 RNA-directed DNA polymerase (Reverse transcriptase) (EC 2.7.7.49) 0.9763 8 192 GO:0003720
AF-D9QQI6-F1-model_v4 RNA-directed DNA polymerase (Reverse transcriptase) 0.973 1 427 GO:0003964
AF-A0A0J1CM50-F1-model_v4 Transposase 0.9706 109 432

Feature Viewer

pLDDT pTM Quality
86.15 0.78 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map