F385661

General Info

Members Datasets Scaffolds Average Seq Length
283 168 566 255

Family's Representative Sequence

Representative Sequence 3300031548|Ga0307408_100023261|Ga0307408_1000232615
Length 245
Sequence MQFYGTPLPGVEKEVYPGKLIVIEGTDGVGRSTHTALLRTWLEARGHAVLDTGTLGRVTMQLFYATDFIDRLENEMLPALRAGFVVLTDRYIYSAIARAEVRGIDSAWIRKIYGMALVPDAVFYLRIKTAQQLVERLLSSGRGFDYWESGMDLHLGEDLYDSFIEYQSRLLKVFDRLTGEYGFQVLNASRSVRTVAADLRHAVTRVLDEPAPTAEDNLSVIKSRRDQNGAKPTTNLVDLNKKALP

Samples

Sample ID Description Type Environment
1 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
2 2162886007 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v1 Metagenome Rhizosphere
3 3300000532 Quercus rhizosphere microbial communities from Sierra Nevada National Park, Granada, Spain - CNA_Illumina_Assembled Metagenome Rhizosphere
4 3300002074 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S1 Metagenome Rhizosphere
5 3300002239 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S2 Metagenome Rhizosphere
6 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
7 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
8 3300005293 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1 v2 (version 2) Metagenome Rhizosphere
9 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
10 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
11 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
12 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
13 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
14 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
15 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
16 3300005343 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG Metagenome Rhizosphere
17 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
18 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
19 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
20 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
21 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
22 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
23 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
24 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
25 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
26 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
27 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
28 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
29 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
30 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
31 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
32 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
33 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
34 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
35 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
36 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
37 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
38 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
39 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
40 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
41 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
42 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
43 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
44 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
45 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
46 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
47 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
48 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
49 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
50 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
51 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
52 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
53 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
54 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
55 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
56 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
57 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
58 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
59 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
61 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
62 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
63 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
64 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
65 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
66 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
67 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
68 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
69 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
70 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
71 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
72 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
73 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
74 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
75 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
76 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
77 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
78 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
79 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
80 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
81 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
82 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
83 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
84 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
85 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
86 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
87 3300025223 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025905 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
117 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
118 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
121 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
122 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
123 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
124 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
125 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
126 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
127 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
128 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
129 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
130 3300034820 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2 Metagenome Rhizosphere
131 3300035088 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_4 Metagenome Rhizosphere
132 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
133 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
134 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
135 3300038996 Genetically engineered switchgrass root microbial communities from Knoxville, USA - plot19 Metagenome Rhizosphere
136 3300042157 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0311LE14Z062817_5210 Metagenome Rhizosphere
137 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
138 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
139 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
140 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
141 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
142 3300049521 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E25_B_7_drought Metagenome Rhizosphere
143 3300049522 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C24_B_7_control Metagenome Rhizosphere
144 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049654 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_A_0_control Metagenome Rhizosphere
146 3300049659 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_B_0_control Metagenome Rhizosphere
147 3300049661 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I5_B_0_control Metagenome Rhizosphere
148 3300049664 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B5_A_2_drought Metagenome Rhizosphere
149 3300049665 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_A_2_drought Metagenome Rhizosphere
150 3300049667 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G5_B_2_control Metagenome Rhizosphere
151 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
152 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
153 3300049671 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_A_3_drought Metagenome Rhizosphere
154 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
155 3300049679 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G11_B_3_drought Metagenome Rhizosphere
156 3300049688 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - E14_A_4_drought Metagenome Rhizosphere
157 3300049706 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J2_B_2_control Metagenome Rhizosphere
158 3300049768 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_B_4_drought Metagenome Rhizosphere
159 3300049779 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C22_A_7_drought Metagenome Rhizosphere
160 3300049853 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_A_2_drought Metagenome Rhizosphere
161 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
162 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
163 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
164 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
165 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
166 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
167 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
168 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0.35
Nodule 0
Rhizoplane 1.06
Rhizosphere 98.59
Stem 0
Stem Tuber 0
Unclassified 30.39

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0307408_100023261 3300031548 Bacteria 4219
2 SwRhRL2b_contig_249957 2162886007 Unclassified 3176
3 CNAas_1000164 3300000532 Bacteria 5953
4 JGI24748J21848_1000007 3300002074 Bacteria 208838
5 JGI24034J26672_10000002 3300002239 Bacteria 925353
6 JGI25406J46586_10022089 3300003203 Unclassified 2543
7 Ga0065712_10078705 3300005290 Unclassified 3296
8 Ga0065712_10090813 3300005290 Unclassified 2403
9 Ga0065715_10005571 3300005293 Unclassified 4001
10 Ga0065715_10016815 3300005293 Bacteria 2026
11 Ga0065715_10035226 3300005293 Unclassified 1736
12 Ga0065707_10138500 3300005295 Bacteria 1805
13 Ga0070676_10106681 3300005328 Unclassified 1738
14 Ga0070676_10201637 3300005328 Bacteria 1304
15 Ga0070690_100027861 3300005330 Unclassified 3496
16 Ga0070690_100118773 3300005330 Bacteria 1773
17 Ga0068869_100018946 3300005334 Bacteria 4692
18 Ga0068869_100019491 3300005334 Unclassified 4637
19 Ga0068869_100294902 3300005334 Unclassified 1308
20 Ga0070666_10244835 3300005335 Unclassified 1268
21 Ga0070680_100004338 3300005336 Bacteria 10666
22 Ga0070680_100035304 3300005336 Unclassified 4036
23 Ga0070680_100351156 3300005336 Bacteria 1254
24 Ga0070689_100095437 3300005340 Unclassified 2349
25 Ga0070687_100086588 3300005343 Unclassified 1722
26 Ga0070692_10070831 3300005345 Unclassified 1857
27 Ga0070668_100127542 3300005347 Unclassified 2039
28 Ga0070669_100030180 3300005353 Unclassified 3910
29 Ga0070669_100071117 3300005353 Bacteria 2573
30 Ga0070674_100041891 3300005356 Bacteria 3107
31 Ga0070673_100012294 3300005364 Bacteria 5873
32 Ga0070673_100122189 3300005364 Bacteria 2174
33 Ga0070673_100237729 3300005364 Bacteria 1582
34 Ga0070673_100308520 3300005364 Bacteria 1395
35 Ga0070688_100120669 3300005365 Unclassified 1755
36 Ga0070688_100184656 3300005365 Unclassified 1449
37 Ga0070709_10117317 3300005434 Bacteria 1798
38 Ga0070714_100000025 3300005435 Bacteria 147717
39 Ga0070701_10286482 3300005438 Unclassified 1008
40 Ga0070705_100021994 3300005440 Unclassified 3400
41 Ga0070700_100000422 3300005441 Bacteria 21527
42 Ga0070694_100103534 3300005444 Bacteria 2017
43 Ga0070694_100114482 3300005444 Bacteria 1926
44 Ga0070694_100150680 3300005444 Unclassified 1698
45 Ga0070694_100494700 3300005444 Unclassified 972
46 Ga0070678_100111797 3300005456 Bacteria 2138
47 Ga0070662_100068159 3300005457 Unclassified 2615
48 Ga0070662_100157879 3300005457 Unclassified 1772
49 Ga0070681_10000095 3300005458 Bacteria 65410
50 Ga0070681_10111190 3300005458 Unclassified 2679
51 Ga0068867_100008887 3300005459 Bacteria 7087
52 Ga0070706_100097775 3300005467 Unclassified 2727
53 Ga0070706_100105035 3300005467 Unclassified 2628
54 Ga0070706_100390759 3300005467 Unclassified 1295
55 Ga0070707_100025854 3300005468 Bacteria 5573
56 Ga0070707_100080470 3300005468 Bacteria 3144
57 Ga0070698_100023370 3300005471 Bacteria 6463
58 Ga0070698_100026461 3300005471 Bacteria 6039
59 Ga0070698_100064548 3300005471 Unclassified 3688
60 Ga0070698_100116319 3300005471 Unclassified 2637
61 Ga0070699_100072557 3300005518 Bacteria 2994
62 Ga0070699_100334748 3300005518 Unclassified 1362
63 Ga0070679_100001352 3300005530 Bacteria 21630
64 Ga0070697_100030358 3300005536 Bacteria 4342
65 Ga0070697_100032343 3300005536 Bacteria 4210
66 Ga0070697_100339433 3300005536 Bacteria 1296
67 Ga0068853_100037876 3300005539 Unclassified 4106
68 Ga0070686_100093097 3300005544 Bacteria 2020
69 Ga0070695_100123728 3300005545 Bacteria 1773
70 Ga0070695_100161553 3300005545 Unclassified 1573
71 Ga0070696_100095854 3300005546 Bacteria 2120
72 Ga0070696_100101531 3300005546 Bacteria 2062
73 Ga0070696_100170745 3300005546 Unclassified 1607
74 Ga0070696_100416209 3300005546 Unclassified 1054
75 Ga0070704_100085288 3300005549 Unclassified 2337
76 Ga0070704_100232673 3300005549 Bacteria 1504
77 Ga0070704_100615052 3300005549 Unclassified 956
78 Ga0068854_100315560 3300005578 Bacteria 1269
79 Ga0068856_100145900 3300005614 Bacteria 2374
80 Ga0070702_100217383 3300005615 Bacteria 1276
81 Ga0070702_100236561 3300005615 Bacteria 1230
82 Ga0068859_100073770 3300005617 Bacteria 3450
83 Ga0068859_100109208 3300005617 Bacteria 2827
84 Ga0068859_100355356 3300005617 Bacteria 1560
85 Ga0068864_100061565 3300005618 Unclassified 3251
86 Ga0068866_10021521 3300005718 Bacteria 2972
87 Ga0068861_100002145 3300005719 Bacteria 12769
88 Ga0068861_100017383 3300005719 Bacteria 5104
89 Ga0068870_10004457 3300005840 Bacteria 6027
90 Ga0068863_100103701 3300005841 Bacteria 2705
91 Ga0068858_100001261 3300005842 Bacteria 26203
92 Ga0068858_100059955 3300005842 Unclassified 3517
93 Ga0068858_100286657 3300005842 Bacteria 1569
94 Ga0068860_100038812 3300005843 Unclassified 4556
95 Ga0068860_100055928 3300005843 Unclassified 3751
96 Ga0068860_100226402 3300005843 Unclassified 1816
97 Ga0068860_100304459 3300005843 Bacteria 1562
98 Ga0068862_100046206 3300005844 Bacteria 3715
99 Ga0081539_10001640 3300005985 Bacteria 36383
100 Ga0070715_10000006 3300006163 Bacteria 216296
101 Ga0070716_100074812 3300006173 Bacteria 2002
102 Ga0070716_100290770 3300006173 Unclassified 1132
103 Ga0097621_100027186 3300006237 Unclassified 4497
104 Ga0068871_100004535 3300006358 Bacteria 9681
105 Ga0075428_100097025 3300006844 Bacteria 3214
106 Ga0075433_10020523 3300006852 Bacteria 5527
107 Ga0075433_10032313 3300006852 Bacteria 4482
108 Ga0075433_10250992 3300006852 Bacteria 1570
109 Ga0075434_100028680 3300006871 Bacteria 5472
110 Ga0075434_100034938 3300006871 Bacteria 4968
111 Ga0075434_100079542 3300006871 Bacteria 3275
112 Ga0075434_100497097 3300006871 Bacteria 1240
113 Ga0097620_100073133 3300006931 Unclassified 3466
114 Ga0097620_100073773 3300006931 Bacteria 3450
115 Ga0097620_100109206 3300006931 Bacteria 2827
116 Ga0097620_100355338 3300006931 Bacteria 1560
117 Ga0075435_100523473 3300007076 Unclassified 1026
118 Ga0099794_10022848 3300007265 Bacteria 2855
119 Ga0105251_10062120 3300009011 Bacteria 1755
120 Ga0105240_10554767 3300009093 Unclassified 1271
121 Ga0111539_10025370 3300009094 Bacteria 7266
122 Ga0111539_10025609 3300009094 Bacteria 7229
123 Ga0105247_10000001 3300009101 Bacteria 739726
124 Ga0114129_10003333 3300009147 Bacteria 22577
125 Ga0114129_10138441 3300009147 Bacteria 3339
126 Ga0114129_10807265 3300009147 Unclassified 1196
127 Ga0105243_10000029 3300009148 Bacteria 190577
128 Ga0105243_10000436 3300009148 Bacteria 43715
129 Ga0105241_10068296 3300009174 Unclassified 2754
130 Ga0105241_10302583 3300009174 Bacteria 1373
131 Ga0105242_10000009 3300009176 Bacteria 162286
132 Ga0105242_10000029 3300009176 Bacteria 102019
133 Ga0105242_10051432 3300009176 Bacteria 3357
134 Ga0105248_10008882 3300009177 Bacteria 11045
135 Ga0105248_10017661 3300009177 Bacteria 7868
136 Ga0105248_10296129 3300009177 Bacteria 1822
137 Ga0105248_10382546 3300009177 Unclassified 1585
138 Ga0105248_10896599 3300009177 Bacteria 1001
139 Ga0105237_10102849 3300009545 Unclassified 2848
140 Ga0105249_10038605 3300009553 Bacteria 4333
141 Ga0105249_10253427 3300009553 Bacteria 1746
142 Ga0105239_10043879 3300010375 Bacteria 4903
143 Ga0105239_10597432 3300010375 Bacteria 1259
144 Ga0105246_10077344 3300011119 Bacteria 2360
145 Ga0105246_10100058 3300011119 Bacteria 2109
146 Ga0157373_10004040 3300013100 Bacteria 11063
147 Ga0157378_10000379 3300013297 Bacteria 43998
148 Ga0157378_10013290 3300013297 Bacteria 7199
149 Ga0157378_10019839 3300013297 Bacteria 5910
150 Ga0157378_10106195 3300013297 Bacteria 2568
151 Ga0157378_10209638 3300013297 Unclassified 1847
152 Ga0157378_10262167 3300013297 Bacteria 1659
153 Ga0157378_10345656 3300013297 Bacteria 1452
154 Ga0163162_10005531 3300013306 Bacteria 12213
155 Ga0163162_10016077 3300013306 Bacteria 7315
156 Ga0163162_10236286 3300013306 Bacteria 1958
157 Ga0157372_10014464 3300013307 Bacteria 8444
158 Ga0157375_10007377 3300013308 Bacteria 9625
159 Ga0163163_10101508 3300014325 Bacteria 2899
160 Ga0163163_10269561 3300014325 Bacteria 1754
161 Ga0163163_10297129 3300014325 Bacteria 1667
162 Ga0163163_10431927 3300014325 Unclassified 1376
163 Ga0163161_10004841 3300017792 Bacteria 9378
164 Ga0163161_10174503 3300017792 Unclassified 1645
165 Ga0207672_1000795 3300025223 Unclassified 3367
166 Ga0207653_10000276 3300025885 Bacteria 30342
167 Ga0207642_10009235 3300025899 Bacteria 3423
168 Ga0207710_10000003 3300025900 Bacteria 1071597
169 Ga0207685_10000010 3300025905 Bacteria 216792
170 Ga0207643_10013538 3300025908 Bacteria 4419
171 Ga0207684_10012142 3300025910 Bacteria 7498
172 Ga0207684_10038099 3300025910 Bacteria 4080
173 Ga0207684_10337435 3300025910 Bacteria 1298
174 Ga0207707_10000571 3300025912 Bacteria 37397
175 Ga0207695_10045881 3300025913 Bacteria 4635
176 Ga0207660_10011137 3300025917 Bacteria 5846
177 Ga0207660_10137173 3300025917 Bacteria 1868
178 Ga0207662_10181426 3300025918 Bacteria 1355
179 Ga0207652_10001366 3300025921 Bacteria 21685
180 Ga0207646_10006373 3300025922 Bacteria 12204
181 Ga0207646_10067174 3300025922 Bacteria 3201
182 Ga0207646_10099453 3300025922 Bacteria 2607
183 Ga0207646_10100948 3300025922 Bacteria 2587
184 Ga0207681_10047459 3300025923 Bacteria 2894
185 Ga0207650_10152597 3300025925 Unclassified 1824
186 Ga0207664_10000071 3300025929 Bacteria 105708
187 Ga0207644_10006884 3300025931 Bacteria 7401
188 Ga0207706_10071404 3300025933 Bacteria 3053
189 Ga0207686_10000010 3300025934 Bacteria 227471
190 Ga0207686_10000030 3300025934 Bacteria 159065
191 Ga0207686_10001528 3300025934 Bacteria 13044
192 Ga0207686_10535705 3300025934 Unclassified 913
193 Ga0207709_10000052 3300025935 Bacteria 227471
194 Ga0207709_10001413 3300025935 Bacteria 16815
195 Ga0207709_10019537 3300025935 Unclassified 3812
196 Ga0207709_10074259 3300025935 Bacteria 2169
197 Ga0207665_10201667 3300025939 Unclassified 1450
198 Ga0207665_10230872 3300025939 Unclassified 1360
199 Ga0207711_10010237 3300025941 Bacteria 7785
200 Ga0207711_10053309 3300025941 Bacteria 3469
201 Ga0207689_10019205 3300025942 Bacteria 5762
202 Ga0207689_10113058 3300025942 Bacteria 2232
203 Ga0207689_10161514 3300025942 Bacteria 1846
204 Ga0207640_10189083 3300025981 Bacteria 1550
205 Ga0207640_10366744 3300025981 Bacteria 1162
206 Ga0207640_10371897 3300025981 Bacteria 1155
207 Ga0207703_10002069 3300026035 Bacteria 17649
208 Ga0207703_10409060 3300026035 Bacteria 1260
209 Ga0207639_10084307 3300026041 Unclassified 2524
210 Ga0207708_10000100 3300026075 Bacteria 65501
211 Ga0207708_10212556 3300026075 Bacteria 1547
212 Ga0207702_10103671 3300026078 Bacteria 2516
213 Ga0207641_10205034 3300026088 Unclassified 1821
214 Ga0207675_100003630 3300026118 Bacteria 15046
215 Ga0207675_100003714 3300026118 Bacteria 14870
216 Ga0207675_100102187 3300026118 Bacteria 2701
217 Ga0207428_10047531 3300027907 Bacteria 3446
218 Ga0268265_10100019 3300028380 Unclassified 2339
219 Ga0268265_10375168 3300028380 Bacteria 1307
220 Ga0268264_10003971 3300028381 Bacteria 12656
221 Ga0307405_10303888 3300031731 Bacteria 1212
222 Ga0307413_10022390 3300031824 Unclassified 3405
223 Ga0307410_10051241 3300031852 Unclassified 2781
224 Ga0307406_10061814 3300031901 Unclassified 2420
225 Ga0307407_10033135 3300031903 Bacteria 2816
226 Ga0307412_10028387 3300031911 Unclassified 3499
227 Ga0307412_10138393 3300031911 Bacteria 1779
228 Ga0307416_100182449 3300032002 Bacteria 1968
229 Ga0307414_10002740 3300032004 Bacteria 9273
230 Ga0307411_10197268 3300032005 Bacteria 1543
231 Ga0307415_100033752 3300032126 Bacteria 3323
232 Ga0307415_100065095 3300032126 Bacteria 2539
233 Ga0307415_100081800 3300032126 Unclassified 2308
234 Ga0373959_0040581 3300034820 Unclassified 975
235 Ga0373940_0057971 3300035088 Bacteria 1102
236 Ga0395898_0162253 3300037466 Bacteria 2138
237 Ga0395905_0014285 3300037471 Bacteria 7586
238 Ga0395905_0184869 3300037471 Bacteria 1956
239 Ga0395901_0089624 3300038443 Bacteria 3219
240 Ga0395901_0345889 3300038443 Unclassified 1535
241 Ga0242420_001536 3300038996 Bacteria 3094
242 Ga0242420_003657 3300038996 Bacteria 2283
243 Ga0439458_0009081 3300042157 Bacteria 2215
244 Ga0495621_0107059 3300046539 Unclassified 1069
245 Ga0496102_0354186 3300048905 Bacteria 1382
246 Ga0496104_0243589 3300048907 Unclassified 1710
247 Ga0496106_0014031 3300048909 Bacteria 5923
248 Ga0501290_005726 3300049513 Bacteria 1550
249 Ga0501298_009434 3300049521 Bacteria 1660
250 Ga0501299_003663 3300049522 Bacteria 2243
251 Ga0501038_0034038 3300049574 Bacteria 4482
252 Ga0501207_001762 3300049654 Unclassified 2738
253 Ga0501207_005999 3300049654 Bacteria 1695
254 Ga0501214_003031 3300049659 Unclassified 1458
255 Ga0501217_005921 3300049661 Bacteria 2575
256 Ga0501224_003202 3300049664 Unclassified 2274
257 Ga0501224_007242 3300049664 Unclassified 1616
258 Ga0501227_000465 3300049665 Bacteria 8625
259 Ga0501230_006220 3300049667 Unclassified 1724
260 Ga0501233_000485 3300049668 Bacteria 6357
261 Ga0501235_012320 3300049669 Unclassified 1880
262 Ga0501235_021940 3300049669 Bacteria 1420
263 Ga0501238_007653 3300049671 Bacteria 1408
264 Ga0501243_004311 3300049675 Unclassified 2132
265 Ga0501249_020682 3300049679 Unclassified 1432
266 Ga0501259_002931 3300049688 Bacteria 2738
267 Ga0501229_008730 3300049706 Bacteria 1269
268 Ga0501271_007538 3300049768 Unclassified 1099
269 Ga0501271_008775 3300049768 Unclassified 1043
270 Ga0501283_001447 3300049779 Bacteria 3082
271 Ga0501226_000284 3300049853 Bacteria 7589
272 nmdc:mga09592_45006_c1 3300050508 Bacteria 3717
273 nmdc:mga08y16_162473_c1 3300050511 Bacteria 2321
274 nmdc:mga08y16_53998_c1 3300050511 Bacteria 4200
275 nmdc:mga0n895_101714_c1 3300050512 Bacteria 2884
276 nmdc:mga0n895_18299_c1 3300050512 Bacteria 6478
277 nmdc:mga0rr50_340986_c1 3300050513 Unclassified 1259
278 nmdc:mga0a205_114493_c1 3300050515 Bacteria 2595
279 nmdc:mga0a205_20731_c1 3300050515 Bacteria 6208
280 nmdc:mga0a205_40562_c1 3300050515 Bacteria 4482
281 Ga0500616_0003330 3300053153 Bacteria 12380
282 Ga0501084_0377691 3300054114 Unclassified 1198
283 Ga0530510_0018207 3300061734 Unclassified 4980
284 Ga0307408_100023261
285 SwRhRL2b_contig_249957
286 CNAas_1000164
287 JGI24748J21848_1000007
288 JGI24034J26672_10000002
289 JGI25406J46586_10022089
290 Ga0065712_10078705
291 Ga0065712_10090813
292 Ga0065715_10005571
293 Ga0065715_10016815
294 Ga0065715_10035226
295 Ga0065707_10138500
296 Ga0070676_10106681
297 Ga0070676_10201637
298 Ga0070690_100027861
299 Ga0070690_100118773
300 Ga0068869_100018946
301 Ga0068869_100019491
302 Ga0068869_100294902
303 Ga0070666_10244835
304 Ga0070680_100004338
305 Ga0070680_100035304
306 Ga0070680_100351156
307 Ga0070689_100095437
308 Ga0070687_100086588
309 Ga0070692_10070831
310 Ga0070668_100127542
311 Ga0070669_100030180
312 Ga0070669_100071117
313 Ga0070674_100041891
314 Ga0070673_100012294
315 Ga0070673_100122189
316 Ga0070673_100237729
317 Ga0070673_100308520
318 Ga0070688_100120669
319 Ga0070688_100184656
320 Ga0070709_10117317
321 Ga0070714_100000025
322 Ga0070701_10286482
323 Ga0070705_100021994
324 Ga0070700_100000422
325 Ga0070694_100103534
326 Ga0070694_100114482
327 Ga0070694_100150680
328 Ga0070694_100494700
329 Ga0070678_100111797
330 Ga0070662_100068159
331 Ga0070662_100157879
332 Ga0070681_10000095
333 Ga0070681_10111190
334 Ga0068867_100008887
335 Ga0070706_100097775
336 Ga0070706_100105035
337 Ga0070706_100390759
338 Ga0070707_100025854
339 Ga0070707_100080470
340 Ga0070698_100023370
341 Ga0070698_100026461
342 Ga0070698_100064548
343 Ga0070698_100116319
344 Ga0070699_100072557
345 Ga0070699_100334748
346 Ga0070679_100001352
347 Ga0070697_100030358
348 Ga0070697_100032343
349 Ga0070697_100339433
350 Ga0068853_100037876
351 Ga0070686_100093097
352 Ga0070695_100123728
353 Ga0070695_100161553
354 Ga0070696_100095854
355 Ga0070696_100101531
356 Ga0070696_100170745
357 Ga0070696_100416209
358 Ga0070704_100085288
359 Ga0070704_100232673
360 Ga0070704_100615052
361 Ga0068854_100315560
362 Ga0068856_100145900
363 Ga0070702_100217383
364 Ga0070702_100236561
365 Ga0068859_100073770
366 Ga0068859_100109208
367 Ga0068859_100355356
368 Ga0068864_100061565
369 Ga0068866_10021521
370 Ga0068861_100002145
371 Ga0068861_100017383
372 Ga0068870_10004457
373 Ga0068863_100103701
374 Ga0068858_100001261
375 Ga0068858_100059955
376 Ga0068858_100286657
377 Ga0068860_100038812
378 Ga0068860_100055928
379 Ga0068860_100226402
380 Ga0068860_100304459
381 Ga0068862_100046206
382 Ga0081539_10001640
383 Ga0070715_10000006
384 Ga0070716_100074812
385 Ga0070716_100290770
386 Ga0097621_100027186
387 Ga0068871_100004535
388 Ga0075428_100097025
389 Ga0075433_10020523
390 Ga0075433_10032313
391 Ga0075433_10250992
392 Ga0075434_100028680
393 Ga0075434_100034938
394 Ga0075434_100079542
395 Ga0075434_100497097
396 Ga0097620_100073133
397 Ga0097620_100073773
398 Ga0097620_100109206
399 Ga0097620_100355338
400 Ga0075435_100523473
401 Ga0099794_10022848
402 Ga0105251_10062120
403 Ga0105240_10554767
404 Ga0111539_10025370
405 Ga0111539_10025609
406 Ga0105247_10000001
407 Ga0114129_10003333
408 Ga0114129_10138441
409 Ga0114129_10807265
410 Ga0105243_10000029
411 Ga0105243_10000436
412 Ga0105241_10068296
413 Ga0105241_10302583
414 Ga0105242_10000009
415 Ga0105242_10000029
416 Ga0105242_10051432
417 Ga0105248_10008882
418 Ga0105248_10017661
419 Ga0105248_10296129
420 Ga0105248_10382546
421 Ga0105248_10896599
422 Ga0105237_10102849
423 Ga0105249_10038605
424 Ga0105249_10253427
425 Ga0105239_10043879
426 Ga0105239_10597432
427 Ga0105246_10077344
428 Ga0105246_10100058
429 Ga0157373_10004040
430 Ga0157378_10000379
431 Ga0157378_10013290
432 Ga0157378_10019839
433 Ga0157378_10106195
434 Ga0157378_10209638
435 Ga0157378_10262167
436 Ga0157378_10345656
437 Ga0163162_10005531
438 Ga0163162_10016077
439 Ga0163162_10236286
440 Ga0157372_10014464
441 Ga0157375_10007377
442 Ga0163163_10101508
443 Ga0163163_10269561
444 Ga0163163_10297129
445 Ga0163163_10431927
446 Ga0163161_10004841
447 Ga0163161_10174503
448 Ga0207672_1000795
449 Ga0207653_10000276
450 Ga0207642_10009235
451 Ga0207710_10000003
452 Ga0207685_10000010
453 Ga0207643_10013538
454 Ga0207684_10012142
455 Ga0207684_10038099
456 Ga0207684_10337435
457 Ga0207707_10000571
458 Ga0207695_10045881
459 Ga0207660_10011137
460 Ga0207660_10137173
461 Ga0207662_10181426
462 Ga0207652_10001366
463 Ga0207646_10006373
464 Ga0207646_10067174
465 Ga0207646_10099453
466 Ga0207646_10100948
467 Ga0207681_10047459
468 Ga0207650_10152597
469 Ga0207664_10000071
470 Ga0207644_10006884
471 Ga0207706_10071404
472 Ga0207686_10000010
473 Ga0207686_10000030
474 Ga0207686_10001528
475 Ga0207686_10535705
476 Ga0207709_10000052
477 Ga0207709_10001413
478 Ga0207709_10019537
479 Ga0207709_10074259
480 Ga0207665_10201667
481 Ga0207665_10230872
482 Ga0207711_10010237
483 Ga0207711_10053309
484 Ga0207689_10019205
485 Ga0207689_10113058
486 Ga0207689_10161514
487 Ga0207640_10189083
488 Ga0207640_10366744
489 Ga0207640_10371897
490 Ga0207703_10002069
491 Ga0207703_10409060
492 Ga0207639_10084307
493 Ga0207708_10000100
494 Ga0207708_10212556
495 Ga0207702_10103671
496 Ga0207641_10205034
497 Ga0207675_100003630
498 Ga0207675_100003714
499 Ga0207675_100102187
500 Ga0207428_10047531
501 Ga0268265_10100019
502 Ga0268265_10375168
503 Ga0268264_10003971
504 Ga0307405_10303888
505 Ga0307413_10022390
506 Ga0307410_10051241
507 Ga0307406_10061814
508 Ga0307407_10033135
509 Ga0307412_10028387
510 Ga0307412_10138393
511 Ga0307416_100182449
512 Ga0307414_10002740
513 Ga0307411_10197268
514 Ga0307415_100033752
515 Ga0307415_100065095
516 Ga0307415_100081800
517 Ga0373959_0040581
518 Ga0373940_0057971
519 Ga0395898_0162253
520 Ga0395905_0014285
521 Ga0395905_0184869
522 Ga0395901_0089624
523 Ga0395901_0345889
524 Ga0242420_001536
525 Ga0242420_003657
526 Ga0439458_0009081
527 Ga0495621_0107059
528 Ga0496102_0354186
529 Ga0496104_0243589
530 Ga0496106_0014031
531 Ga0501290_005726
532 Ga0501298_009434
533 Ga0501299_003663
534 Ga0501038_0034038
535 Ga0501207_001762
536 Ga0501207_005999
537 Ga0501214_003031
538 Ga0501217_005921
539 Ga0501224_003202
540 Ga0501224_007242
541 Ga0501227_000465
542 Ga0501230_006220
543 Ga0501233_000485
544 Ga0501235_012320
545 Ga0501235_021940
546 Ga0501238_007653
547 Ga0501243_004311
548 Ga0501249_020682
549 Ga0501259_002931
550 Ga0501229_008730
551 Ga0501271_007538
552 Ga0501271_008775
553 Ga0501283_001447
554 Ga0501226_000284
555 nmdc:mga09592_45006_c1
556 nmdc:mga08y16_162473_c1
557 nmdc:mga08y16_53998_c1
558 nmdc:mga0n895_101714_c1
559 nmdc:mga0n895_18299_c1
560 nmdc:mga0rr50_340986_c1
561 nmdc:mga0a205_114493_c1
562 nmdc:mga0a205_20731_c1
563 nmdc:mga0a205_40562_c1
564 Ga0500616_0003330
565 Ga0501084_0377691
566 Ga0530510_0018207

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02223

Thymidylate_kin

Thymidylate kinase

47

199

0.76

Structural Annotation

Top 5 Hits

ID Description Score Start End
5h70-assembly1.cif.gz_A crystal structure of adp bound dtmp kinase (st1543) from sulfolobus tokodaii strain7 0.8222 1 205
5h70-assembly1.cif.gz_B crystal structure of adp bound dtmp kinase (st1543) from sulfolobus tokodaii strain7 0.8187 2 205
5h70-assembly1.cif.gz_A crystal structure of adp bound dtmp kinase (st1543) from sulfolobus tokodaii strain7 0.8148 1 205
4nzy-assembly1.cif.gz_B crystal structure (type-2) of dtmp kinase (st1543) from sulfolobus tokodaii strain7 0.8104 2 206
4rzx-assembly1.cif.gz_B crystal structure (type-3) of dtmp kinase (st1543) from sulfolobus tokodaii strain7 0.8098 2 204
ID Description Score Start End Superfamily
4rzxB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.8098 2 204 3.40.50.300
4rzxB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7953 2 204 3.40.50.300
2cckB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7398 2 209 3.40.50.300
2yohA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7347 2 204 3.40.50.300
2pbrA00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.7317 2 203 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A2V5NYJ3-F1-model_v4 Thymidylate kinase 0.9209 89 207 GO:0016301
AF-A0A367IAT5-F1-model_v4 Uncharacterized protein 0.9151 87 207
AF-A0A2V5NYJ3-F1-model_v4 Thymidylate kinase 0.8994 89 207 GO:0016301
AF-A0A382DA33-F1-model_v4 Thymidylate kinase-like domain-containing protein 0.8958 81 206 GO:0004798
GO:0005737
GO:0006227
GO:0006233
GO:0006235
AF-A0A3C0VXW5-F1-model_v4 Thymidylate kinase 0.8781 26 206 GO:0004798
GO:0005737
GO:0006227
GO:0006233
GO:0006235

Map