F384992

General Info

Members Datasets Scaffolds Average Seq Length
282 198 564 265

Family's Representative Sequence

Representative Sequence 3300025986|Ga0207658_10137777|Ga0207658_101377773
Length 308
Sequence VRIPGQKRENSHYCGTTQGKVSVQRCYADPPLSPCEPIALKPSSVNRFPQRIVCLTEETTETLYLLGEQDRIVGISGFTARPPEARKEKPRVSAFTSARIDKILALEPDLVLGFSDLQADIARELVQRGIAVHIFNHRSVDGILRMIAMLGAIVGAHDRAAALLAQLEANLSEAQRAAERLLHRPRIYFEEWNDPLISGIRWVSELIDLAGGVDCFAELGTQPLGSQRIIADPQDVVRRQPDIIIGSWCGKKFRPEQVSKREGWLDIPAVRSGSLYEIKSADILQPGPAALTDGLRQLRDIVQRWAQT

Samples

Sample ID Description Type Environment
1 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
2 3300002077 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 Metagenome Rhizosphere
3 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
4 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
5 3300005290 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 v3 (version 3) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
8 3300005330 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG Metagenome Rhizosphere
9 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
10 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
11 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
12 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
13 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
14 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
15 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
16 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
17 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
18 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
19 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
20 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
21 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
22 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
23 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
24 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
25 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
26 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
27 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
28 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
29 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
30 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
31 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
32 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
33 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
34 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
35 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
36 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
37 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
38 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
39 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
40 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
45 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
46 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
47 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
48 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
49 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
50 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
51 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
52 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
53 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
54 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
55 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
56 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
57 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
58 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
59 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
60 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
61 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
62 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
63 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
64 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
65 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
66 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
67 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
68 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
69 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
70 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
71 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
72 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
73 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
74 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
75 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
76 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
77 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
78 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
101 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
102 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
104 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
105 3300031727 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_050615r3r5 Metagenome Rhizosphere
106 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
107 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
108 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
109 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
110 3300035241 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_4 Metagenome Rhizosphere
111 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
112 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
113 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
114 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
115 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
116 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
117 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
118 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
119 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
120 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
121 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
122 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
123 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
124 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
125 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
126 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
127 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
128 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
129 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
130 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
131 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
132 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
133 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
134 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
135 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
136 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
137 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
138 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
139 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
140 3300046514 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 rhizosphere Metagenome Rhizosphere
141 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
142 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
143 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
144 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
145 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
146 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
147 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
148 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
149 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
150 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
151 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
152 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
153 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
154 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
155 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
156 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
157 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
158 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
159 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
160 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
161 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
164 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
166 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
169 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
171 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
172 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
173 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
174 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
175 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
176 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
177 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
178 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
179 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
180 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
181 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
182 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
183 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
184 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
185 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
186 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
187 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
188 3300053077 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL1_33_12 rhizosphere Metagenome Rhizosphere
189 3300053078 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL1_27_10 rhizosphere Metagenome Rhizosphere
190 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
191 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
192 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
193 3300053156 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 endosphere Metagenome Endosphere
194 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
195 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
196 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
197 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
198 2894510363 Methylomonas sp. Kb3 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 99.65
Metatranscriptomes 0
Isolates 0.35

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.48
Nodule 0
Rhizoplane 0.35
Rhizosphere 95.04
Stem 0
Stem Tuber 0
Unclassified 4.26

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0207658_10137777 3300025986 Bacteria 1971
2 JGI24744J21845_10024830 3300002077 Bacteria 1171
3 JGI24751J29686_10015498 3300002459 Bacteria 1572
4 JGI25406J46586_10000120 3300003203 Bacteria 34396
5 JGI25406J46586_10010510 3300003203 Bacteria 4104
6 JGI25406J46586_10075659 3300003203 Bacteria 1044
7 Ga0065712_10000744 3300005290 Bacteria 14601
8 Ga0065712_10074580 3300005290 Bacteria 4058
9 Ga0065707_10089559 3300005295 Bacteria 4338
10 Ga0070658_10008806 3300005327 Bacteria 8111
11 Ga0070690_100137884 3300005330 Bacteria 1653
12 Ga0070670_100095266 3300005331 Bacteria 2560
13 Ga0070677_10032422 3300005333 Bacteria 2004
14 Ga0070680_100213538 3300005336 Bacteria 1628
15 Ga0068868_100188634 3300005338 Bacteria 1714
16 Ga0070660_100006125 3300005339 Bacteria 8321
17 Ga0070660_100018527 3300005339 Bacteria 5088
18 Ga0070689_100037092 3300005340 Bacteria 3728
19 Ga0070689_100264478 3300005340 Bacteria 1422
20 Ga0070692_10252288 3300005345 Bacteria 1057
21 Ga0070669_100035900 3300005353 Unclassified 3591
22 Ga0070669_100063449 3300005353 Bacteria 2719
23 Ga0070675_100045937 3300005354 Bacteria 3576
24 Ga0070674_100041995 3300005356 Unclassified 3104
25 Ga0070674_100476070 3300005356 Bacteria 1035
26 Ga0070673_100581668 3300005364 Bacteria 1020
27 Ga0070659_100381568 3300005366 Bacteria 1187
28 Ga0070694_100063342 3300005444 Bacteria 2528
29 Ga0070708_100333166 3300005445 Bacteria 1430
30 Ga0070662_100273708 3300005457 Bacteria 1364
31 Ga0070681_10003616 3300005458 Bacteria 14503
32 Ga0070681_10032641 3300005458 Bacteria 5226
33 Ga0070681_10489907 3300005458 Bacteria 1142
34 Ga0070706_100595330 3300005467 Bacteria 1028
35 Ga0070698_100003898 3300005471 Bacteria 16406
36 Ga0070698_100157076 3300005471 Unclassified 2220
37 Ga0070699_100000172 3300005518 Bacteria 62043
38 Ga0070699_100016152 3300005518 Bacteria 6408
39 Ga0070699_100024230 3300005518 Bacteria 5229
40 Ga0070679_100019201 3300005530 Bacteria 6643
41 Ga0070679_100035688 3300005530 Bacteria 4933
42 Ga0070679_100147126 3300005530 Bacteria 2333
43 Ga0070684_100440224 3300005535 Bacteria 1204
44 Ga0070697_100023793 3300005536 Bacteria 4874
45 Ga0070697_100131132 3300005536 Bacteria 2102
46 Ga0070697_100288979 3300005536 Bacteria 1408
47 Ga0070697_100305054 3300005536 Bacteria 1369
48 Ga0068853_100239702 3300005539 Bacteria 1662
49 Ga0070695_100001169 3300005545 Bacteria 14409
50 Ga0070696_100049642 3300005546 Bacteria 2915
51 Ga0070665_100025266 3300005548 Bacteria 5985
52 Ga0070665_100029679 3300005548 Bacteria 5502
53 Ga0070665_100060384 3300005548 Bacteria 3800
54 Ga0068855_100021526 3300005563 Bacteria 7732
55 Ga0068855_100083205 3300005563 Bacteria 3707
56 Ga0070664_100024234 3300005564 Bacteria 5018
57 Ga0068857_100461774 3300005577 Bacteria 1188
58 Ga0068859_100000084 3300005617 Bacteria 87012
59 Ga0068851_10011261 3300005834 Bacteria 4191
60 Ga0068863_100220433 3300005841 Bacteria 1827
61 Ga0068863_100278194 3300005841 Bacteria 1621
62 Ga0068858_100093490 3300005842 Bacteria 2799
63 Ga0068860_100574374 3300005843 Bacteria 1131
64 Ga0068862_100001104 3300005844 Bacteria 25631
65 Ga0068862_100219644 3300005844 Bacteria 1720
66 Ga0068862_100323613 3300005844 Bacteria 1424
67 Ga0068862_100567899 3300005844 Bacteria 1085
68 Ga0068862_100749318 3300005844 Bacteria 950
69 Ga0081538_10049211 3300005981 Bacteria 2559
70 Ga0081539_10000024 3300005985 Bacteria 354702
71 Ga0081539_10011883 3300005985 Bacteria 6803
72 Ga0081539_10021425 3300005985 Bacteria 4319
73 Ga0075365_10149983 3300006038 Bacteria 1622
74 Ga0070715_10203229 3300006163 Bacteria 1008
75 Ga0070716_100382983 3300006173 Bacteria 1006
76 Ga0075366_10048901 3300006195 Unclassified 2509
77 Ga0097621_100005172 3300006237 Bacteria 9168
78 Ga0097621_100097082 3300006237 Bacteria 2473
79 Ga0068871_100004481 3300006358 Bacteria 9723
80 Ga0068871_100028967 3300006358 Bacteria 4346
81 Ga0075428_100009601 3300006844 Bacteria 10745
82 Ga0075428_100067654 3300006844 Bacteria 3909
83 Ga0075434_100007002 3300006871 Bacteria 10399
84 Ga0075429_100233236 3300006880 Bacteria 1612
85 Ga0068865_100374483 3300006881 Bacteria 1160
86 Ga0075436_100007999 3300006914 Bacteria 7238
87 Ga0075436_100230905 3300006914 Bacteria 1314
88 Ga0097620_100000084 3300006931 Bacteria 87012
89 Ga0075435_100028816 3300007076 Bacteria 4356
90 Ga0075435_100046162 3300007076 Bacteria 3494
91 Ga0105240_10034591 3300009093 Bacteria 6516
92 Ga0105240_10060899 3300009093 Bacteria 4705
93 Ga0105240_10285769 3300009093 Bacteria 1893
94 Ga0105240_10298575 3300009093 Bacteria 1843
95 Ga0111539_10066641 3300009094 Bacteria 4253
96 Ga0105245_10365418 3300009098 Bacteria 1433
97 Ga0105247_10195921 3300009101 Bacteria 1355
98 Ga0114129_10027105 3300009147 Bacteria 8113
99 Ga0114129_10037467 3300009147 Bacteria 6845
100 Ga0114129_10786076 3300009147 Unclassified 1215
101 Ga0105243_10334489 3300009148 Bacteria 1385
102 Ga0105242_10015698 3300009176 Bacteria 5884
103 Ga0105248_10013864 3300009177 Bacteria 8868
104 Ga0105248_10372674 3300009177 Unclassified 1607
105 Ga0105237_10175411 3300009545 Bacteria 2144
106 Ga0105238_10002750 3300009551 Bacteria 17539
107 Ga0105238_10013992 3300009551 Bacteria 8114
108 Ga0105238_10046128 3300009551 Bacteria 4399
109 Ga0105238_10064852 3300009551 Bacteria 3652
110 Ga0105238_10272656 3300009551 Bacteria 1673
111 Ga0105246_10483827 3300011119 Bacteria 1048
112 Ga0157374_10108367 3300013296 Bacteria 2670
113 Ga0157378_10015633 3300013297 Bacteria 6647
114 Ga0157378_10403597 3300013297 Bacteria 1347
115 Ga0157372_10055290 3300013307 Bacteria 4432
116 Ga0157375_10012624 3300013308 Bacteria 7497
117 Ga0157380_10469616 3300014326 Bacteria 1213
118 Ga0157380_10657929 3300014326 Bacteria 1046
119 Ga0157379_10213270 3300014968 Bacteria 1748
120 Ga0157376_10409895 3300014969 Bacteria 1312
121 Ga0213876_10099054 3300021384 Bacteria 1545
122 Ga0207707_10004604 3300025912 Bacteria 12113
123 Ga0207707_10051802 3300025912 Bacteria 3575
124 Ga0207707_10053346 3300025912 Bacteria 3519
125 Ga0207707_10535303 3300025912 Bacteria 997
126 Ga0207695_10206946 3300025913 Bacteria 1874
127 Ga0207657_10000779 3300025919 Bacteria 33835
128 Ga0207652_10143938 3300025921 Bacteria 2132
129 Ga0207652_10654735 3300025921 Bacteria 939
130 Ga0207681_10046149 3300025923 Unclassified 2930
131 Ga0207694_10004556 3300025924 Bacteria 10806
132 Ga0207694_10013622 3300025924 Bacteria 6130
133 Ga0207694_10254210 3300025924 Bacteria 1438
134 Ga0207650_10033423 3300025925 Bacteria 3725
135 Ga0207659_10032049 3300025926 Bacteria 3603
136 Ga0207659_10094434 3300025926 Unclassified 2241
137 Ga0207687_10229173 3300025927 Bacteria 1467
138 Ga0207700_10859603 3300025928 Bacteria 812
139 Ga0207690_10323218 3300025932 Bacteria 1213
140 Ga0207670_10012359 3300025936 Bacteria 4994
141 Ga0207669_10212148 3300025937 Unclassified 1414
142 Ga0207665_10022583 3300025939 Bacteria 4140
143 Ga0207665_10161694 3300025939 Bacteria 1611
144 Ga0207667_10050810 3300025949 Bacteria 4373
145 Ga0207667_10138914 3300025949 Unclassified 2502
146 Ga0207668_10089707 3300025972 Bacteria 2254
147 Ga0207703_10266703 3300026035 Bacteria 1550
148 Ga0207702_10080127 3300026078 Bacteria 2832
149 Ga0207641_10076896 3300026088 Bacteria 2887
150 Ga0207641_10237112 3300026088 Bacteria 1698
151 Ga0207648_10033725 3300026089 Bacteria 4515
152 Ga0207676_10615978 3300026095 Bacteria 1044
153 Ga0207698_10235406 3300026142 Bacteria 1665
154 Ga0268266_10001703 3300028379 Bacteria 25197
155 Ga0268266_10048856 3300028379 Bacteria 3627
156 Ga0268265_10000072 3300028380 Bacteria 130716
157 Ga0268265_10448863 3300028380 Bacteria 1204
158 Ga0268265_10471499 3300028380 Bacteria 1177
159 Ga0268265_10483541 3300028380 Bacteria 1163
160 Ga0268264_10094542 3300028381 Unclassified 2584
161 Ga0268264_10304957 3300028381 Bacteria 1500
162 Ga0265334_10000030 3300028573 Bacteria 112102
163 Ga0316579_10049502 3300031691 Bacteria 1963
164 Ga0316576_10021274 3300031727 Bacteria 4484
165 Ga0307516_10152091 3300031730 Unclassified 2073
166 Ga0373945_0016231 3300035116 Bacteria 2508
167 Ga0373943_0003990 3300035170 Bacteria 6717
168 Ga0373946_0022739 3300035171 Bacteria 2443
169 Ga0373961_0004975 3300035241 Bacteria 3194
170 Ga0373935_0003918 3300035692 Bacteria 8687
171 Ga0373947_0020342 3300035725 Bacteria 3831
172 Ga0373937_0096084 3300036401 Bacteria 2748
173 Ga0316584_0021165 3300036712 Bacteria 4723
174 Ga0316584_0162460 3300036712 Bacteria 1659
175 Ga0373925_0005541 3300037068 Bacteria 9399
176 Ga0373925_0012672 3300037068 Bacteria 6105
177 Ga0395900_0000491 3300037418 Bacteria 55920
178 Ga0395900_0075975 3300037418 Bacteria 3453
179 Ga0395898_0000466 3300037466 Bacteria 80988
180 Ga0436365_0627284 3300039437 Bacteria 1330
181 Ga0436365_1937189 3300039437 Bacteria 2172
182 Ga0436362_0402885 3300039453 Bacteria 901
183 Ga0439449_0000458 3300042007 Bacteria 15210
184 Ga0439462_0020114 3300042015 Bacteria 1740
185 Ga0451577_0004779 3300042876 Bacteria 14161
186 Ga0451577_0126985 3300042876 Bacteria 2286
187 Ga0466969_0006815 3300044656 Bacteria 6076
188 Ga0466972_0020381 3300044658 Bacteria 3314
189 Ga0466966_0003189 3300044684 Bacteria 10797
190 Ga0466966_0015346 3300044684 Bacteria 5065
191 Ga0466961_0002552 3300044693 Bacteria 11277
192 Ga0466961_0005241 3300044693 Bacteria 8160
193 Ga0466961_0040564 3300044693 Bacteria 2984
194 Ga0466963_0067773 3300044694 Bacteria 2395
195 Ga0466963_0165952 3300044694 Bacteria 1538
196 Ga0466964_0064400 3300044706 Bacteria 1533
197 Ga0453684_0014076 3300044712 Bacteria 12865
198 Ga0466971_0002481 3300044719 Bacteria 7796
199 Ga0466971_0015397 3300044719 Bacteria 3365
200 Ga0466970_0054384 3300044765 Bacteria 2137
201 Ga0466957_0135491 3300044842 Bacteria 1582
202 Ga0466957_0341293 3300044842 Bacteria 1014
203 Ga0466959_0000886 3300045049 Bacteria 17631
204 Ga0466959_0055781 3300045049 Bacteria 2883
205 Ga0451576_0040111 3300045051 Bacteria 4957
206 Ga0451576_0332778 3300045051 Bacteria 1589
207 Ga0466958_0062190 3300045836 Bacteria 2275
208 Ga0466967_0004939 3300045976 Bacteria 9119
209 Ga0495653_0175950 3300046463 Bacteria 1473
210 Ga0495580_0097081 3300046472 Bacteria 2049
211 Ga0495662_0027268 3300046476 Bacteria 2760
212 Ga0495618_0022509 3300046514 Bacteria 3892
213 Ga0495630_0008318 3300046517 Bacteria 7448
214 Ga0495663_0087626 3300046525 Bacteria 1011
215 Ga0495666_0023701 3300046526 Bacteria 3035
216 Ga0495665_0013911 3300046531 Bacteria 4346
217 Ga0495640_0073788 3300046533 Bacteria 2283
218 Ga0495659_0026706 3300046664 Bacteria 1987
219 Ga0495646_0257932 3300046680 Bacteria 932
220 Ga0495658_0015946 3300046683 Bacteria 3864
221 Ga0495613_0048197 3300046689 Bacteria 3146
222 Ga0495581_0011557 3300047315 Bacteria 5107
223 Ga0495674_0045956 3300047319 Bacteria 3877
224 Ga0495672_0220288 3300047320 Bacteria 937
225 Ga0495676_0042607 3300047321 Bacteria 3724
226 Ga0495680_0282181 3300047322 Bacteria 1170
227 Ga0495675_0154867 3300047444 Bacteria 1414
228 Ga0495684_0006004 3300047471 Bacteria 9438
229 Ga0495593_0113232 3300047673 Bacteria 1384
230 Ga0495614_0074138 3300048089 Bacteria 1470
231 Ga0496103_0055761 3300048906 Bacteria 2451
232 Ga0496118_0037431 3300048921 Bacteria 3904
233 Ga0501033_0043455 3300049570 Bacteria 3347
234 Ga0501033_0076069 3300049570 Bacteria 2464
235 Ga0501034_0033539 3300049571 Bacteria 5207
236 Ga0501037_0261350 3300049573 Bacteria 1209
237 Ga0501038_0036296 3300049574 Bacteria 4326
238 Ga0501040_0035681 3300049576 Bacteria 3373
239 Ga0501042_0075233 3300049578 Bacteria 2416
240 Ga0501043_0051529 3300049579 Bacteria 3234
241 Ga0501043_0098603 3300049579 Bacteria 2296
242 Ga0501046_0090982 3300049580 Bacteria 2347
243 Ga0501047_0007406 3300049581 Bacteria 10325
244 Ga0501070_0150564 3300049586 Bacteria 1920
245 Ga0501071_0070534 3300049587 Bacteria 2545
246 Ga0501072_0095767 3300049588 Bacteria 2359
247 Ga0501073_0023192 3300049589 Bacteria 4459
248 Ga0501075_0042513 3300049591 Bacteria 3407
249 Ga0501076_0052526 3300049592 Bacteria 3228
250 Ga0501077_0051532 3300049593 Bacteria 2615
251 Ga0501079_0013974 3300049741 Bacteria 6123
252 Ga0501080_0031208 3300049742 Bacteria 4965
253 Ga0501081_0036333 3300049743 Bacteria 3359
254 Ga0501044_0022940 3300049823 Bacteria 6644
255 Ga0501044_0133438 3300049823 Bacteria 2476
256 nmdc:mga06z11_218674_c1 3300050494 Bacteria 1112
257 nmdc:mga05p37_391770_c1 3300050507 Bacteria 1624
258 nmdc:mga05p37_541578_c1 3300050507 Bacteria 1327
259 nmdc:mga05p37_65813_c1 3300050507 Bacteria 4459
260 nmdc:mga05p37_823788_c1 3300050507 Bacteria 1012
261 nmdc:mga09592_168714_c1 3300050508 Viruses 1892
262 nmdc:mga09592_219767_c1 3300050508 Bacteria 1646
263 nmdc:mga08y16_208009_c1 3300050511 Bacteria 2027
264 nmdc:mga08y16_77075_c1 3300050511 Bacteria 3475
265 nmdc:mga0n895_13752_c1 3300050512 Bacteria 7319
266 nmdc:mga0rr50_1020431_c1 3300050513 Bacteria 705
267 nmdc:mga0rr50_386568_c1 3300050513 Bacteria 1181
268 nmdc:mga0rr50_4323_c1 3300050513 Bacteria 8329
269 nmdc:mga08x19_21_c1 3300050514 Bacteria 302369
270 Ga0495601_0068115 3300053077 Bacteria 2268
271 Ga0495612_0014477 3300053078 Bacteria 3172
272 Ga0500651_0061635 3300053093 Bacteria 2342
273 Ga0500595_005400 3300053119 Bacteria 5586
274 Ga0500616_0000350 3300053153 Bacteria 65815
275 Ga0500622_0000029 3300053156 Bacteria 213762
276 Ga0501084_0106308 3300054114 Bacteria 2358
277 Ga0501082_0091710 3300060353 Bacteria 2623
278 Ga0501082_0299747 3300060353 Bacteria 1400
279 Ga0466962_0018508 3300061719 Bacteria 3350
280 Ga0466962_0048808 3300061719 Bacteria 2022
281 Ga0530510_0132325 3300061734 Bacteria 1835
282 2894513413 2894510363 Bacteria 5121143
283 Ga0207658_10137777
284 JGI24744J21845_10024830
285 JGI24751J29686_10015498
286 JGI25406J46586_10000120
287 JGI25406J46586_10010510
288 JGI25406J46586_10075659
289 Ga0065712_10000744
290 Ga0065712_10074580
291 Ga0065707_10089559
292 Ga0070658_10008806
293 Ga0070690_100137884
294 Ga0070670_100095266
295 Ga0070677_10032422
296 Ga0070680_100213538
297 Ga0068868_100188634
298 Ga0070660_100006125
299 Ga0070660_100018527
300 Ga0070689_100037092
301 Ga0070689_100264478
302 Ga0070692_10252288
303 Ga0070669_100035900
304 Ga0070669_100063449
305 Ga0070675_100045937
306 Ga0070674_100041995
307 Ga0070674_100476070
308 Ga0070673_100581668
309 Ga0070659_100381568
310 Ga0070694_100063342
311 Ga0070708_100333166
312 Ga0070662_100273708
313 Ga0070681_10003616
314 Ga0070681_10032641
315 Ga0070681_10489907
316 Ga0070706_100595330
317 Ga0070698_100003898
318 Ga0070698_100157076
319 Ga0070699_100000172
320 Ga0070699_100016152
321 Ga0070699_100024230
322 Ga0070679_100019201
323 Ga0070679_100035688
324 Ga0070679_100147126
325 Ga0070684_100440224
326 Ga0070697_100023793
327 Ga0070697_100131132
328 Ga0070697_100288979
329 Ga0070697_100305054
330 Ga0068853_100239702
331 Ga0070695_100001169
332 Ga0070696_100049642
333 Ga0070665_100025266
334 Ga0070665_100029679
335 Ga0070665_100060384
336 Ga0068855_100021526
337 Ga0068855_100083205
338 Ga0070664_100024234
339 Ga0068857_100461774
340 Ga0068859_100000084
341 Ga0068851_10011261
342 Ga0068863_100220433
343 Ga0068863_100278194
344 Ga0068858_100093490
345 Ga0068860_100574374
346 Ga0068862_100001104
347 Ga0068862_100219644
348 Ga0068862_100323613
349 Ga0068862_100567899
350 Ga0068862_100749318
351 Ga0081538_10049211
352 Ga0081539_10000024
353 Ga0081539_10011883
354 Ga0081539_10021425
355 Ga0075365_10149983
356 Ga0070715_10203229
357 Ga0070716_100382983
358 Ga0075366_10048901
359 Ga0097621_100005172
360 Ga0097621_100097082
361 Ga0068871_100004481
362 Ga0068871_100028967
363 Ga0075428_100009601
364 Ga0075428_100067654
365 Ga0075434_100007002
366 Ga0075429_100233236
367 Ga0068865_100374483
368 Ga0075436_100007999
369 Ga0075436_100230905
370 Ga0097620_100000084
371 Ga0075435_100028816
372 Ga0075435_100046162
373 Ga0105240_10034591
374 Ga0105240_10060899
375 Ga0105240_10285769
376 Ga0105240_10298575
377 Ga0111539_10066641
378 Ga0105245_10365418
379 Ga0105247_10195921
380 Ga0114129_10027105
381 Ga0114129_10037467
382 Ga0114129_10786076
383 Ga0105243_10334489
384 Ga0105242_10015698
385 Ga0105248_10013864
386 Ga0105248_10372674
387 Ga0105237_10175411
388 Ga0105238_10002750
389 Ga0105238_10013992
390 Ga0105238_10046128
391 Ga0105238_10064852
392 Ga0105238_10272656
393 Ga0105246_10483827
394 Ga0157374_10108367
395 Ga0157378_10015633
396 Ga0157378_10403597
397 Ga0157372_10055290
398 Ga0157375_10012624
399 Ga0157380_10469616
400 Ga0157380_10657929
401 Ga0157379_10213270
402 Ga0157376_10409895
403 Ga0213876_10099054
404 Ga0207707_10004604
405 Ga0207707_10051802
406 Ga0207707_10053346
407 Ga0207707_10535303
408 Ga0207695_10206946
409 Ga0207657_10000779
410 Ga0207652_10143938
411 Ga0207652_10654735
412 Ga0207681_10046149
413 Ga0207694_10004556
414 Ga0207694_10013622
415 Ga0207694_10254210
416 Ga0207650_10033423
417 Ga0207659_10032049
418 Ga0207659_10094434
419 Ga0207687_10229173
420 Ga0207700_10859603
421 Ga0207690_10323218
422 Ga0207670_10012359
423 Ga0207669_10212148
424 Ga0207665_10022583
425 Ga0207665_10161694
426 Ga0207667_10050810
427 Ga0207667_10138914
428 Ga0207668_10089707
429 Ga0207703_10266703
430 Ga0207702_10080127
431 Ga0207641_10076896
432 Ga0207641_10237112
433 Ga0207648_10033725
434 Ga0207676_10615978
435 Ga0207698_10235406
436 Ga0268266_10001703
437 Ga0268266_10048856
438 Ga0268265_10000072
439 Ga0268265_10448863
440 Ga0268265_10471499
441 Ga0268265_10483541
442 Ga0268264_10094542
443 Ga0268264_10304957
444 Ga0265334_10000030
445 Ga0316579_10049502
446 Ga0316576_10021274
447 Ga0307516_10152091
448 Ga0373945_0016231
449 Ga0373943_0003990
450 Ga0373946_0022739
451 Ga0373961_0004975
452 Ga0373935_0003918
453 Ga0373947_0020342
454 Ga0373937_0096084
455 Ga0316584_0021165
456 Ga0316584_0162460
457 Ga0373925_0005541
458 Ga0373925_0012672
459 Ga0395900_0000491
460 Ga0395900_0075975
461 Ga0395898_0000466
462 Ga0436365_0627284
463 Ga0436365_1937189
464 Ga0436362_0402885
465 Ga0439449_0000458
466 Ga0439462_0020114
467 Ga0451577_0004779
468 Ga0451577_0126985
469 Ga0466969_0006815
470 Ga0466972_0020381
471 Ga0466966_0003189
472 Ga0466966_0015346
473 Ga0466961_0002552
474 Ga0466961_0005241
475 Ga0466961_0040564
476 Ga0466963_0067773
477 Ga0466963_0165952
478 Ga0466964_0064400
479 Ga0453684_0014076
480 Ga0466971_0002481
481 Ga0466971_0015397
482 Ga0466970_0054384
483 Ga0466957_0135491
484 Ga0466957_0341293
485 Ga0466959_0000886
486 Ga0466959_0055781
487 Ga0451576_0040111
488 Ga0451576_0332778
489 Ga0466958_0062190
490 Ga0466967_0004939
491 Ga0495653_0175950
492 Ga0495580_0097081
493 Ga0495662_0027268
494 Ga0495618_0022509
495 Ga0495630_0008318
496 Ga0495663_0087626
497 Ga0495666_0023701
498 Ga0495665_0013911
499 Ga0495640_0073788
500 Ga0495659_0026706
501 Ga0495646_0257932
502 Ga0495658_0015946
503 Ga0495613_0048197
504 Ga0495581_0011557
505 Ga0495674_0045956
506 Ga0495672_0220288
507 Ga0495676_0042607
508 Ga0495680_0282181
509 Ga0495675_0154867
510 Ga0495684_0006004
511 Ga0495593_0113232
512 Ga0495614_0074138
513 Ga0496103_0055761
514 Ga0496118_0037431
515 Ga0501033_0043455
516 Ga0501033_0076069
517 Ga0501034_0033539
518 Ga0501037_0261350
519 Ga0501038_0036296
520 Ga0501040_0035681
521 Ga0501042_0075233
522 Ga0501043_0051529
523 Ga0501043_0098603
524 Ga0501046_0090982
525 Ga0501047_0007406
526 Ga0501070_0150564
527 Ga0501071_0070534
528 Ga0501072_0095767
529 Ga0501073_0023192
530 Ga0501075_0042513
531 Ga0501076_0052526
532 Ga0501077_0051532
533 Ga0501079_0013974
534 Ga0501080_0031208
535 Ga0501081_0036333
536 Ga0501044_0022940
537 Ga0501044_0133438
538 nmdc:mga06z11_218674_c1
539 nmdc:mga05p37_391770_c1
540 nmdc:mga05p37_541578_c1
541 nmdc:mga05p37_65813_c1
542 nmdc:mga05p37_823788_c1
543 nmdc:mga09592_168714_c1
544 nmdc:mga09592_219767_c1
545 nmdc:mga08y16_208009_c1
546 nmdc:mga08y16_77075_c1
547 nmdc:mga0n895_13752_c1
548 nmdc:mga0rr50_1020431_c1
549 nmdc:mga0rr50_386568_c1
550 nmdc:mga0rr50_4323_c1
551 nmdc:mga08x19_21_c1
552 Ga0495601_0068115
553 Ga0495612_0014477
554 Ga0500651_0061635
555 Ga0500595_005400
556 Ga0500616_0000350
557 Ga0500622_0000029
558 Ga0501084_0106308
559 Ga0501082_0091710
560 Ga0501082_0299747
561 Ga0466962_0018508
562 Ga0466962_0048808
563 Ga0530510_0132325
564 2894513413

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01497

Peripla_BP_2

Periplasmic binding protein

52

281

0.99

Structural Annotation

Top 5 Hits

ID Description Score Start End
4m7o-assembly1.cif.gz_A the crystal structure of a possible an iron-binding (periplasmic solute-binding) protein from staphylococcus epidermidis atcc 12228. 0.8612 30 280
5m29-assembly2.cif.gz_B structure of cobinamide-bound btuf, the periplasmic vitamin b12 binding protein in e.coli 0.8581 30 284
5m2q-assembly2.cif.gz_B structure of cobinamide-bound btuf mutant w66f, the periplasmic vitamin b12 binding protein in e.coli 0.8525 28 283
2r79-assembly1.cif.gz_A crystal structure of a periplasmic heme binding protein from pseudomonas aeruginosa 0.8522 30 281
5m34-assembly2.cif.gz_B structure of cobinamide-bound btuf mutant w66y, the periplasmic vitamin b12 binding protein in e.coli 0.8514 28 283
ID Description Score Start End Superfamily
2r79A01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.9301 30 147 3.40.50.1980
3pshA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.9177 29 146 3.40.50.1980
5yscA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.9115 30 146 3.40.50.1980
2rg7D01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.9098 31 146 3.40.50.1980
5y8bA01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Nitrogenase molybdenum iron protein domain 0.9012 31 146 3.40.50.1980
ID Description Score Start End GO Terms
AF-A0A2V8DVZ8-F1-model_v4 Cobalamin-binding protein 0.9965 29 284
AF-A0A4Q6GJA2-F1-model_v4 Cobalamin-binding protein 0.9962 165 290
AF-A0A539EHA8-F1-model_v4 Iron complex transport system substrate-binding protein 0.9954 37 140 GO:0071281
AF-A0A7V9NK12-F1-model_v4 Cobalamin-binding protein 0.9949 28 286
AF-A0A4Q8M1G8-F1-model_v4 Cobalamin-binding protein 0.9941 28 286 GO:0071281

Map