F384636

General Info

Members Datasets Scaffolds Average Seq Length
281 223 562 350

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2829745981|2829747185
Length 431
Sequence APCRPATPLAAKGPQRRPSCIVIGPLHRFPAPDRIEAPLEPSQRGLARSGLRGSMSRKLISERPCLMLPESSQMGQLPRFKVAAVHAAPVFLDKAATTRKAVSILREAAHAGAEFIAFPETFIPAFPVWSALWAPIENHDLFARMATESVFVDGPEVAEIRHEARQLGVFVSIGISERSTASVGCLWNSNLLIGDDGAILVHHRKLVPTFYEKLVWAAGDGEGLRVAETRIGRLGGLICGENTNPLARFTLMAQGEQVHVSSWPPIWPTRPPAEGGNFDNVAANRIRASAHSFEAKAFGVVSAGFMDGAMRDALVGRDAKIARVLDETPRAASFVIDPTGRQISETLQDAEGIVYAEIDINACVEPKQFHDVVGYYNRYDVFDLTVRRKRQQPVAFRSDDERPPAEPQRPAASLPRAQLHEIGPGYGQFDP

Samples

Sample ID Description Type Environment
1 3300002704 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB Metagenome Unclassified
2 3300002705 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS Metagenome Unclassified
3 3300002737 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA Metagenome Endosphere
4 3300002738 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA Metagenome Unclassified
5 3300002741 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL Metagenome Unclassified
6 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
7 3300003758 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 Metagenome Endosphere
8 3300003761 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 Metagenome Endosphere
9 3300003773 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 Metagenome Endosphere
10 3300003784 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 Metagenome Endosphere
11 3300003790 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 Metagenome Endosphere
12 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
13 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
14 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
15 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
16 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
17 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
18 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
19 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
20 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
21 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
22 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
23 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
24 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
25 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
26 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
27 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
31 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
32 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
33 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
34 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
35 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
36 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
37 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
38 3300006948 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 Metagenome Nodule
39 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
40 3300009011 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG Metagenome Rhizosphere
41 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
42 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
43 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
44 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
45 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
46 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
47 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
48 3300025206 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mLB (SPAdes) (version 2) Metagenome Unclassified
49 3300025229 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mLB_r2 (SPAdes) (version 2) Metagenome Endosphere
50 3300025233 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mTSA (SPAdes) (version 2) Metagenome Endosphere
51 3300025242 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mTSA_r2 (SPAdes) (version 2) Metagenome Endosphere
52 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
53 3300025250 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mCL (SPAdes) (version 2) Metagenome Unclassified
54 3300025256 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mMS (SPAdes) (version 2) Metagenome Unclassified
55 3300025261 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Cvi_mCL (SPAdes) (version 2) Metagenome Endosphere
56 3300025263 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mTSA_r2 (SPAdes) (version 3) Metagenome Endosphere
57 3300025272 Arabidopsis root microbial communities from North Carolina, USA - plate scrape CL_Col_mCL_r2 (SPAdes) (version 2) Metagenome Endosphere
58 3300025273 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mMS_r2 (SPAdes) (version 3) Metagenome Endosphere
59 3300025291 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Col_mLB_r2 (SPAdes) (version 3) Metagenome Endosphere
60 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
61 3300025735 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027666 Root nodule microbial communities of legume samples collected from California, USA - M. trunc garden sep15 (SPAdes) (version 2) Metagenome Nodule
83 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
84 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
85 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
86 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
87 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
88 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
89 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
90 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
91 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
92 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
93 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
94 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
95 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
96 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
97 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
98 3300046458 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co3_19_46 rhizosphere Metagenome Rhizosphere
99 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
100 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
101 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
102 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
103 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
104 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
105 3300046507 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co2_62_14 rhizosphere Metagenome Rhizosphere
106 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
107 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
108 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
109 3300046526 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23 rhizosphere Metagenome Rhizosphere
110 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
111 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
112 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
113 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
114 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
115 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
116 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
117 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
118 3300046665 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co3_16_51 rhizosphere Metagenome Rhizosphere
119 3300046680 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 rhizosphere Metagenome Rhizosphere
120 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
121 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
122 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
123 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
124 3300046810 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co2_51_17 rhizosphere Metagenome Rhizosphere
125 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
126 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
127 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
128 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
129 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
130 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
131 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
132 3300047446 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 rhizosphere Metagenome Rhizosphere
133 3300047469 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 rhizosphere Metagenome Rhizosphere
134 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
135 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
136 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
137 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
138 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
139 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
140 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
141 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
142 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
143 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
144 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
145 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
146 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
147 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
148 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
149 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
152 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
153 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
154 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
157 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
158 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
159 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
161 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
162 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
163 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
164 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
165 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
166 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
167 3300053079 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 endosphere Metagenome Endosphere
168 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
169 3300053092 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 endosphere Metagenome Endosphere
170 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
171 3300053095 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL3_72_14 endosphere Metagenome Endosphere
172 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
173 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
174 3300053111 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 endosphere Metagenome Endosphere
175 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
176 3300053119 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 endosphere Metagenome Endosphere
177 3300053123 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 endosphere Metagenome Endosphere
178 3300053125 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL1_28_5 endosphere Metagenome Endosphere
179 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
180 3300053134 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWD-24-1-Co1_7_5 endosphere Metagenome Endosphere
181 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
182 3300053139 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 endosphere Metagenome Endosphere
183 3300053147 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co3_11_46 endosphere Metagenome Endosphere
184 3300053148 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL2_44_14 endosphere Metagenome Endosphere
185 3300053150 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 endosphere Metagenome Endosphere
186 3300053151 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co1_22_4 endosphere Metagenome Endosphere
187 3300053154 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL2_38_7 endosphere Metagenome Endosphere
188 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
189 3300053163 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 endosphere Metagenome Endosphere
190 3300053177 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 endosphere Metagenome Endosphere
191 3300053730 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 endosphere Metagenome Endosphere
192 3300053735 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL2_50_4 endosphere Metagenome Endosphere
193 3300055283 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL1_25_23_RD_R2 endosphere Metagenome Endosphere
194 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
195 2829745981 Methylorubrum rhodinum DSM 2163 Isolate Rhizosphere
196 2508501128 Bradyrhizobium sp. ARR65 Isolate Nodule
197 2513237096 Bradyrhizobium pachyrhizi USDA 3259 Isolate Nodule
198 2513237137 Bradyrhizobium elkanii USDA 94 Isolate Nodule
199 2513237145 Bradyrhizobium elkanii USDA 3254 Isolate Nodule
200 2517572143 Bradyrhizobium elkanii USDA 76 Isolate Nodule
201 2524023228 Bradyrhizobium sp. Th.b2 Isolate Nodule
202 2562617112 Burkholderia sp. BT03 Isolate Rhizosphere
203 2667528175 Rhizobium tropici NFR14 Isolate Rhizoplane
204 2711768613 Burkholderia sp. BT03 Isolate Rhizosphere
205 2828305725 Xanthobacter tagetidis DSM 11105 Isolate Unclassified
206 2842694124 Methylopila sp. R-72369 Isolate Unclassified
207 2876808645 Bradyrhizobium algeriense RST89 Isolate Unclassified
208 2879110137 Bradyrhizobium algeriense RST91 Isolate Nodule
209 2885374607 Bradyrhizobium sp. NAS96.2 Isolate Unclassified
210 2903748898 Bradyrhizobium uaiense UFLA 03-164 Isolate Nodule
211 2904699407
212 2906610324
213 2906635258 Bradyrhizobium sp. USDA 3458 Isolate Unclassified
214 2906660503 Bradyrhizobium brasilense UFLA 03-321 Isolate Unclassified
215 2922425934
216 2941507105 Bradyrhizobium sp. i1.12.3 Isolate Nodule
217 2941515067 Bradyrhizobium sp. i1.14.1 Isolate Nodule
218 2941523033 Bradyrhizobium sp. i1.8.4 Isolate Nodule
219 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule
220 8006973647 Bradyrhizobium septentrionale 162S2 Isolate Nodule
221 8019555841 Bradyrhizobium sp. JR6.1 Isolate Nodule
222 8019565922 Bradyrhizobium sp. JR3.5 Isolate Nodule
223 8057529695 Bosea vestrisii A18/4-2 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 90.65
Metatranscriptomes 0
Isolates 9.35

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 18.15
Nodule 6.41
Rhizoplane 2.14
Rhizosphere 54.8
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25155J39150_1000210 3300002704 Bacteria 23638
2 JGI25156J39149_1000017 3300002705 Bacteria 171827
3 JGI25156J39149_1000158 3300002705 Bacteria 49923
4 JGI25162J39368_1004941 3300002737 Bacteria 2835
5 JGI25154J39366_1000175 3300002738 Bacteria 49923
6 JGI25157J39369_1000768 3300002741 Bacteria 16639
7 rootH2_10008412 3300003320 Bacteria 7066
8 Ga0055532_1000080 3300003758 Bacteria 120879
9 Ga0055535_1003657 3300003761 Bacteria 4187
10 Ga0055537_1000313 3300003773 Bacteria 33199
11 Ga0055534_1000298 3300003784 Bacteria 33219
12 Ga0055528_1001210 3300003790 Bacteria 16550
13 Ga0065165_1000397 3300005262 Bacteria 70430
14 Ga0065714_10026516 3300005288 Bacteria 1636
15 Ga0070658_10084110 3300005327 Bacteria 2616
16 Ga0070670_100306302 3300005331 Bacteria 1390
17 Ga0070668_100312906 3300005347 Bacteria 1320
18 Ga0070709_10000901 3300005434 Bacteria 16543
19 Ga0070714_100001857 3300005435 Bacteria 15383
20 Ga0070714_100018550 3300005435 Bacteria 5654
21 Ga0070713_100087456 3300005436 Bacteria 2673
22 Ga0070713_100251859 3300005436 Bacteria 1611
23 Ga0070710_10000609 3300005437 Bacteria 17020
24 Ga0070711_100006491 3300005439 Bacteria 7053
25 Ga0070663_100082524 3300005455 Bacteria 2365
26 Ga0070681_10001416 3300005458 Bacteria 21068
27 Ga0070706_100008525 3300005467 Bacteria 9556
28 Ga0070707_100006501 3300005468 Bacteria 10855
29 Ga0068853_100077510 3300005539 Bacteria 2903
30 Ga0068855_100007943 3300005563 Bacteria 12821
31 Ga0068855_100088564 3300005563 Bacteria 3575
32 Ga0068855_100244213 3300005563 Bacteria 2005
33 Ga0068857_100187543 3300005577 Bacteria 1883
34 Ga0068856_100078817 3300005614 Bacteria 3266
35 Ga0070716_100002314 3300006173 Bacteria 8772
36 Ga0070712_100005228 3300006175 Bacteria 8032
37 Ga0075366_10132653 3300006195 Bacteria 1503
38 Ga0075428_100435712 3300006844 Bacteria 1404
39 Ga0075431_100154416 3300006847 Bacteria 2362
40 Ga0075433_10000071 3300006852 Bacteria 45544
41 Ga0075434_100055344 3300006871 Bacteria 3942
42 Ga0075436_100000224 3300006914 Bacteria 35201
43 Ga0099826_10003196 3300006948 Bacteria 11026
44 Ga0075435_100012277 3300007076 Bacteria 6336
45 Ga0105251_10039369 3300009011 Bacteria 2311
46 Ga0105240_10002265 3300009093 Bacteria 31201
47 Ga0114129_10000298 3300009147 Bacteria 57595
48 Ga0114129_10036096 3300009147 Bacteria 6982
49 Ga0114129_10043335 3300009147 Bacteria 6330
50 Ga0114129_10058227 3300009147 Bacteria 5405
51 Ga0105238_10296725 3300009551 Bacteria 1599
52 Ga0157373_10000913 3300013100 Bacteria 22887
53 Ga0157373_10010807 3300013100 Bacteria 6720
54 Ga0157370_10002889 3300013104 Bacteria 20483
55 Ga0182008_10071976 3300014497 Bacteria 1701
56 Ga0163161_10061138 3300017792 Bacteria 2742
57 Ga0209435_100018 3300025206 Bacteria 274625
58 Ga0209147_100051 3300025229 Bacteria 274605
59 Ga0209437_100145 3300025233 Bacteria 163138
60 Ga0209258_100725 3300025242 Bacteria 22005
61 Ga0209646_1000090 3300025246 Bacteria 189912
62 Ga0209026_1000042 3300025250 Bacteria 273111
63 Ga0209759_1000109 3300025256 Bacteria 145042
64 Ga0209233_1000463 3300025261 Bacteria 25873
65 Ga0209565_1000430 3300025263 Bacteria 33766
66 Ga0209455_1001087 3300025272 Bacteria 13381
67 Ga0209455_1003674 3300025272 Bacteria 5319
68 Ga0209673_1001126 3300025273 Bacteria 29575
69 Ga0209675_1000433 3300025291 Bacteria 33472
70 Ga0209051_1018789 3300025303 Bacteria 3044
71 Ga0207713_1048033 3300025735 Bacteria 1722
72 Ga0207692_10002760 3300025898 Bacteria 6765
73 Ga0207647_10020732 3300025904 Bacteria 4403
74 Ga0207699_10003599 3300025906 Bacteria 7406
75 Ga0207684_10000546 3300025910 Bacteria 46386
76 Ga0207684_10004548 3300025910 Bacteria 13033
77 Ga0207707_10001166 3300025912 Bacteria 24755
78 Ga0207695_10001490 3300025913 Bacteria 39048
79 Ga0207693_10008585 3300025915 Bacteria 8364
80 Ga0207663_10007919 3300025916 Bacteria 5543
81 Ga0207660_10000544 3300025917 Bacteria 25321
82 Ga0207657_10005477 3300025919 Bacteria 13252
83 Ga0207652_10000954 3300025921 Bacteria 27068
84 Ga0207646_10005166 3300025922 Bacteria 13820
85 Ga0207646_10008103 3300025922 Bacteria 10585
86 Ga0207650_10240828 3300025925 Bacteria 1462
87 Ga0207700_10058869 3300025928 Bacteria 2904
88 Ga0207664_10013501 3300025929 Bacteria 5865
89 Ga0207664_10047961 3300025929 Bacteria 3357
90 Ga0207664_10062512 3300025929 Bacteria 2974
91 Ga0207690_10130411 3300025932 Bacteria 1839
92 Ga0207665_10001968 3300025939 Bacteria 13831
93 Ga0207667_10029544 3300025949 Bacteria 5944
94 Ga0207678_10042405 3300026067 Bacteria 3941
95 Ga0207678_10083369 3300026067 Bacteria 2734
96 Ga0207702_10037378 3300026078 Bacteria 4064
97 Ga0209282_1000186 3300027666 Bacteria 33086
98 Ga0307515_10020602 3300028794 Bacteria 11750
99 Ga0307512_10035399 3300030522 Bacteria 4256
100 Ga0307509_10150653 3300031507 Bacteria 2242
101 Ga0307508_10009580 3300031616 Bacteria 8900
102 Ga0307516_10000343 3300031730 Bacteria 60659
103 Ga0307516_10008211 3300031730 Bacteria 11855
104 Ga0307516_10037427 3300031730 Bacteria 4851
105 Ga0307414_10225836 3300032004 Bacteria 1540
106 Ga0307411_10003675 3300032005 Bacteria 7181
107 Ga0307411_10048356 3300032005 Bacteria 2756
108 Ga0373936_0000043 3300035113 Bacteria 87319
109 Ga0373925_0323092 3300037068 Bacteria 1249
110 Ga0436364_0707566 3300037853 Bacteria 1291
111 Ga0395901_0383281 3300038443 Bacteria 1447
112 Ga0436365_0602853 3300039437 Bacteria 3025
113 Ga0436365_1251263 3300039437 Bacteria 1761
114 Ga0436360_0345758 3300039438 Bacteria 1969
115 Ga0436361_0795763 3300039447 Bacteria 6523
116 Ga0495603_0102367 3300046455 Bacteria 1671
117 Ga0495591_011127 3300046458 Bacteria 3427
118 Ga0495629_0039016 3300046459 Bacteria 3344
119 Ga0495651_0093337 3300046462 Bacteria 2253
120 Ga0495653_0005168 3300046463 Bacteria 10604
121 Ga0495580_0027117 3300046472 Bacteria 4170
122 Ga0495582_0004851 3300046473 Bacteria 7546
123 Ga0495596_0005644 3300046500 Bacteria 5879
124 Ga0495606_0158192 3300046507 Bacteria 1324
125 Ga0495608_0045460 3300046511 Bacteria 2926
126 Ga0495628_0005824 3300046516 Bacteria 10795
127 Ga0495630_0002434 3300046517 Bacteria 12887
128 Ga0495630_0194433 3300046517 Bacteria 1548
129 Ga0495666_0003790 3300046526 Bacteria 7643
130 Ga0495652_0002775 3300046529 Bacteria 17696
131 Ga0495652_0150350 3300046529 Bacteria 1820
132 Ga0495665_0000806 3300046531 Bacteria 16422
133 Ga0495640_0046963 3300046533 Bacteria 2989
134 Ga0495640_0105058 3300046533 Bacteria 1850
135 Ga0495622_0016037 3300046557 Bacteria 3485
136 Ga0495633_0058114 3300046558 Bacteria 1816
137 Ga0495634_0005324 3300046642 Bacteria 9920
138 Ga0495634_0143544 3300046642 Bacteria 1514
139 Ga0495625_0002171 3300046660 Bacteria 21791
140 Ga0495635_0053358 3300046663 Bacteria 2786
141 Ga0495661_0001104 3300046665 Bacteria 23660
142 Ga0495646_0008781 3300046680 Bacteria 6419
143 Ga0495646_0102331 3300046680 Bacteria 1641
144 Ga0495613_0017757 3300046689 Bacteria 5301
145 Ga0495613_0103735 3300046689 Bacteria 2053
146 Ga0495624_0001747 3300046690 Bacteria 16621
147 Ga0495624_0038492 3300046690 Bacteria 3072
148 Ga0495589_0001469 3300046794 Bacteria 13569
149 Ga0495600_0044476 3300046809 Bacteria 2897
150 Ga0495660_0001929 3300046810 Bacteria 13529
151 Ga0495581_0009047 3300047315 Bacteria 5762
152 Ga0495581_0014333 3300047315 Bacteria 4597
153 Ga0495604_0004179 3300047317 Bacteria 11449
154 Ga0495604_0005751 3300047317 Bacteria 9834
155 Ga0495674_0002720 3300047319 Bacteria 17184
156 Ga0495672_0005922 3300047320 Bacteria 9581
157 Ga0495672_0017271 3300047320 Bacteria 4830
158 Ga0495676_0017799 3300047321 Bacteria 6274
159 Ga0495676_0055505 3300047321 Bacteria 3140
160 Ga0495680_0004167 3300047322 Bacteria 13898
161 Ga0495683_0065390 3300047323 Bacteria 1794
162 Ga0495683_0118843 3300047323 Bacteria 1256
163 Ga0495679_000149 3300047446 Bacteria 62962
164 Ga0495673_0000479 3300047469 Bacteria 42800
165 Ga0495673_0032539 3300047469 Bacteria 2429
166 Ga0495673_0058782 3300047469 Bacteria 1655
167 Ga0495593_0002161 3300047673 Bacteria 11755
168 Ga0495602_0110030 3300048088 Bacteria 2240
169 Ga0495614_0001791 3300048089 Bacteria 9397
170 Ga0496101_0057482 3300048904 Bacteria 2814
171 Ga0496106_0000158 3300048909 Bacteria 49207
172 Ga0496114_0065731 3300048917 Bacteria 3039
173 Ga0496115_0028711 3300048918 Bacteria 4362
174 Ga0496115_0089129 3300048918 Bacteria 2519
175 Ga0496116_0031110 3300048919 Bacteria 3827
176 Ga0496116_0037666 3300048919 Bacteria 3369
177 Ga0496119_0022211 3300048922 Bacteria 4552
178 Ga0496119_0148805 3300048922 Bacteria 1257
179 Ga0496120_0019993 3300048923 Bacteria 4268
180 Ga0496121_0000125 3300048924 Bacteria 169274
181 Ga0496121_0000166 3300048924 Bacteria 145051
182 Ga0496121_0006634 3300048924 Bacteria 14254
183 Ga0496121_0020473 3300048924 Bacteria 6545
184 Ga0496121_0055567 3300048924 Bacteria 3297
185 Ga0496122_0002310 3300048925 Bacteria 27515
186 Ga0496122_0138663 3300048925 Bacteria 1526
187 Ga0496124_0025466 3300048927 Bacteria 5358
188 Ga0496124_0080602 3300048927 Bacteria 2678
189 Ga0496125_0003473 3300048928 Bacteria 19082
190 Ga0496125_0009768 3300048928 Bacteria 9790
191 Ga0496125_0044130 3300048928 Bacteria 3775
192 Ga0496126_0023429 3300048929 Bacteria 5984
193 Ga0496126_0036008 3300048929 Bacteria 4632
194 Ga0496126_0100482 3300048929 Bacteria 2531
195 Ga0496126_0101734 3300048929 Bacteria 2513
196 Ga0496126_0108708 3300048929 Bacteria 2417
197 Ga0496126_0133754 3300048929 Bacteria 2141
198 Ga0501033_0030431 3300049570 Bacteria 4057
199 Ga0501034_0025353 3300049571 Bacteria 6036
200 Ga0501036_0062974 3300049572 Bacteria 3141
201 Ga0501037_0153682 3300049573 Bacteria 1643
202 Ga0501038_0308038 3300049574 Bacteria 1241
203 Ga0501040_0313030 3300049576 Bacteria 1123
204 Ga0501042_0211491 3300049578 Bacteria 1399
205 Ga0501043_0003506 3300049579 Bacteria 12899
206 Ga0501046_0030663 3300049580 Bacteria 4363
207 Ga0501047_0127523 3300049581 Bacteria 2425
208 Ga0501048_0043169 3300049582 Bacteria 3228
209 Ga0501070_0083117 3300049586 Bacteria 2651
210 Ga0501070_0124288 3300049586 Bacteria 2132
211 Ga0501035_0002287 3300049822 Bacteria 18937
212 Ga0501035_0048375 3300049822 Bacteria 3814
213 Ga0501035_0076531 3300049822 Bacteria 2959
214 Ga0501044_0048419 3300049823 Bacteria 4391
215 Ga0501044_0075800 3300049823 Bacteria 3415
216 nmdc:mga07m45_85472_c1 3300050496 Bacteria 1804
217 nmdc:mga05p37_32071_c1 3300050507 Bacteria 6424
218 nmdc:mga0n895_220_c1 3300050512 Bacteria 35971
219 nmdc:mga08x19_207_c1 3300050514 Bacteria 45031
220 Ga0500610_0148746 3300053079 Bacteria 1176
221 Ga0500646_0000879 3300053090 Bacteria 8278
222 Ga0500583_0000486 3300053092 Bacteria 12208
223 Ga0500583_0138102 3300053092 Bacteria 1210
224 Ga0500566_0000009 3300053094 Bacteria 131668
225 Ga0500640_000068 3300053095 Bacteria 17078
226 Ga0500641_0006756 3300053096 Bacteria 4081
227 Ga0500641_0007005 3300053096 Bacteria 4015
228 Ga0500555_000948 3300053103 Bacteria 10087
229 Ga0500572_000070 3300053111 Bacteria 32133
230 Ga0500594_0036475 3300053118 Bacteria 1323
231 Ga0500595_006086 3300053119 Bacteria 5172
232 Ga0500614_001582 3300053123 Bacteria 5378
233 Ga0500618_002030 3300053125 Bacteria 8201
234 Ga0500642_0001433 3300053130 Bacteria 6838
235 Ga0500658_0000012 3300053134 Bacteria 160010
236 Ga0500658_0008065 3300053134 Bacteria 3894
237 Ga0500559_0004308 3300053136 Bacteria 6798
238 Ga0500559_0006553 3300053136 Bacteria 5252
239 Ga0500559_0011843 3300053136 Bacteria 3716
240 Ga0500568_0019450 3300053139 Bacteria 2951
241 Ga0500589_077219 3300053147 Bacteria 1494
242 Ga0500590_017166 3300053148 Bacteria 3742
243 Ga0500603_000387 3300053150 Bacteria 11544
244 Ga0500604_0001488 3300053151 Bacteria 6554
245 Ga0500619_000161 3300053154 Bacteria 16290
246 Ga0500630_000240 3300053159 Bacteria 21822
247 Ga0500639_000545 3300053163 Bacteria 18833
248 Ga0500636_0083862 3300053177 Bacteria 1833
249 Ga0500645_006522 3300053730 Bacteria 4150
250 Ga0500596_000198 3300053735 Bacteria 9955
251 Ga0500661_001600 3300055283 Bacteria 4280
252 Ga0501082_0037066 3300060353 Bacteria 4201
253 2829747185 2829745981 Bacteria 5406054
254 2509150520 2508501128 Bacteria 8613869
255 2513654450 2513237096 Bacteria 8722461
256 2513859253 2513237137 Bacteria 9558895
257 2513915371 2513237145 Bacteria 8979722
258 2517892674 2517572143 Bacteria 9484767
259 2524538156 2524023228 Bacteria 10118060
260 2563055894 2562617112 Bacteria 10918404
261 2671117399 2667528175 Bacteria 7532676
262 2713482478 2711768613 Bacteria 11048459
263 2828307311 2828305725 Bacteria 4916900
264 2842694792 2842694124 Bacteria 4063419
265 2876812620 2876808645 Bacteria 8824342
266 2879116227 2879110137 Bacteria 8907982
267 2885378494 2885374607 Bacteria 8927485
268 2903750568 2903748898 Bacteria 9972761
269 2904702810
270 2906618320
271 2906641493 2906635258 Bacteria 8601019
272 2906664398 2906660503 Bacteria 8595048
273 2922429778
274 2941510300 2941507105 Bacteria 8166816
275 2941517963 2941515067 Bacteria 8166720
276 2941525979 2941523033 Bacteria 8169134
277 643597538 643348564 Bacteria 8839022
278 8006980761 8006973647 Bacteria 10679141
279 8019557100 8019555841 Bacteria 9642137
280 8019568201 8019565922 Bacteria 9639779
281 8057535763 8057529695 Bacteria 6306553
282 JGI25155J39150_1000210
283 JGI25156J39149_1000017
284 JGI25156J39149_1000158
285 JGI25162J39368_1004941
286 JGI25154J39366_1000175
287 JGI25157J39369_1000768
288 rootH2_10008412
289 Ga0055532_1000080
290 Ga0055535_1003657
291 Ga0055537_1000313
292 Ga0055534_1000298
293 Ga0055528_1001210
294 Ga0065165_1000397
295 Ga0065714_10026516
296 Ga0070658_10084110
297 Ga0070670_100306302
298 Ga0070668_100312906
299 Ga0070709_10000901
300 Ga0070714_100001857
301 Ga0070714_100018550
302 Ga0070713_100087456
303 Ga0070713_100251859
304 Ga0070710_10000609
305 Ga0070711_100006491
306 Ga0070663_100082524
307 Ga0070681_10001416
308 Ga0070706_100008525
309 Ga0070707_100006501
310 Ga0068853_100077510
311 Ga0068855_100007943
312 Ga0068855_100088564
313 Ga0068855_100244213
314 Ga0068857_100187543
315 Ga0068856_100078817
316 Ga0070716_100002314
317 Ga0070712_100005228
318 Ga0075366_10132653
319 Ga0075428_100435712
320 Ga0075431_100154416
321 Ga0075433_10000071
322 Ga0075434_100055344
323 Ga0075436_100000224
324 Ga0099826_10003196
325 Ga0075435_100012277
326 Ga0105251_10039369
327 Ga0105240_10002265
328 Ga0114129_10000298
329 Ga0114129_10036096
330 Ga0114129_10043335
331 Ga0114129_10058227
332 Ga0105238_10296725
333 Ga0157373_10000913
334 Ga0157373_10010807
335 Ga0157370_10002889
336 Ga0182008_10071976
337 Ga0163161_10061138
338 Ga0209435_100018
339 Ga0209147_100051
340 Ga0209437_100145
341 Ga0209258_100725
342 Ga0209646_1000090
343 Ga0209026_1000042
344 Ga0209759_1000109
345 Ga0209233_1000463
346 Ga0209565_1000430
347 Ga0209455_1001087
348 Ga0209455_1003674
349 Ga0209673_1001126
350 Ga0209675_1000433
351 Ga0209051_1018789
352 Ga0207713_1048033
353 Ga0207692_10002760
354 Ga0207647_10020732
355 Ga0207699_10003599
356 Ga0207684_10000546
357 Ga0207684_10004548
358 Ga0207707_10001166
359 Ga0207695_10001490
360 Ga0207693_10008585
361 Ga0207663_10007919
362 Ga0207660_10000544
363 Ga0207657_10005477
364 Ga0207652_10000954
365 Ga0207646_10005166
366 Ga0207646_10008103
367 Ga0207650_10240828
368 Ga0207700_10058869
369 Ga0207664_10013501
370 Ga0207664_10047961
371 Ga0207664_10062512
372 Ga0207690_10130411
373 Ga0207665_10001968
374 Ga0207667_10029544
375 Ga0207678_10042405
376 Ga0207678_10083369
377 Ga0207702_10037378
378 Ga0209282_1000186
379 Ga0307515_10020602
380 Ga0307512_10035399
381 Ga0307509_10150653
382 Ga0307508_10009580
383 Ga0307516_10000343
384 Ga0307516_10008211
385 Ga0307516_10037427
386 Ga0307414_10225836
387 Ga0307411_10003675
388 Ga0307411_10048356
389 Ga0373936_0000043
390 Ga0373925_0323092
391 Ga0436364_0707566
392 Ga0395901_0383281
393 Ga0436365_0602853
394 Ga0436365_1251263
395 Ga0436360_0345758
396 Ga0436361_0795763
397 Ga0495603_0102367
398 Ga0495591_011127
399 Ga0495629_0039016
400 Ga0495651_0093337
401 Ga0495653_0005168
402 Ga0495580_0027117
403 Ga0495582_0004851
404 Ga0495596_0005644
405 Ga0495606_0158192
406 Ga0495608_0045460
407 Ga0495628_0005824
408 Ga0495630_0002434
409 Ga0495630_0194433
410 Ga0495666_0003790
411 Ga0495652_0002775
412 Ga0495652_0150350
413 Ga0495665_0000806
414 Ga0495640_0046963
415 Ga0495640_0105058
416 Ga0495622_0016037
417 Ga0495633_0058114
418 Ga0495634_0005324
419 Ga0495634_0143544
420 Ga0495625_0002171
421 Ga0495635_0053358
422 Ga0495661_0001104
423 Ga0495646_0008781
424 Ga0495646_0102331
425 Ga0495613_0017757
426 Ga0495613_0103735
427 Ga0495624_0001747
428 Ga0495624_0038492
429 Ga0495589_0001469
430 Ga0495600_0044476
431 Ga0495660_0001929
432 Ga0495581_0009047
433 Ga0495581_0014333
434 Ga0495604_0004179
435 Ga0495604_0005751
436 Ga0495674_0002720
437 Ga0495672_0005922
438 Ga0495672_0017271
439 Ga0495676_0017799
440 Ga0495676_0055505
441 Ga0495680_0004167
442 Ga0495683_0065390
443 Ga0495683_0118843
444 Ga0495679_000149
445 Ga0495673_0000479
446 Ga0495673_0032539
447 Ga0495673_0058782
448 Ga0495593_0002161
449 Ga0495602_0110030
450 Ga0495614_0001791
451 Ga0496101_0057482
452 Ga0496106_0000158
453 Ga0496114_0065731
454 Ga0496115_0028711
455 Ga0496115_0089129
456 Ga0496116_0031110
457 Ga0496116_0037666
458 Ga0496119_0022211
459 Ga0496119_0148805
460 Ga0496120_0019993
461 Ga0496121_0000125
462 Ga0496121_0000166
463 Ga0496121_0006634
464 Ga0496121_0020473
465 Ga0496121_0055567
466 Ga0496122_0002310
467 Ga0496122_0138663
468 Ga0496124_0025466
469 Ga0496124_0080602
470 Ga0496125_0003473
471 Ga0496125_0009768
472 Ga0496125_0044130
473 Ga0496126_0023429
474 Ga0496126_0036008
475 Ga0496126_0100482
476 Ga0496126_0101734
477 Ga0496126_0108708
478 Ga0496126_0133754
479 Ga0501033_0030431
480 Ga0501034_0025353
481 Ga0501036_0062974
482 Ga0501037_0153682
483 Ga0501038_0308038
484 Ga0501040_0313030
485 Ga0501042_0211491
486 Ga0501043_0003506
487 Ga0501046_0030663
488 Ga0501047_0127523
489 Ga0501048_0043169
490 Ga0501070_0083117
491 Ga0501070_0124288
492 Ga0501035_0002287
493 Ga0501035_0048375
494 Ga0501035_0076531
495 Ga0501044_0048419
496 Ga0501044_0075800
497 nmdc:mga07m45_85472_c1
498 nmdc:mga05p37_32071_c1
499 nmdc:mga0n895_220_c1
500 nmdc:mga08x19_207_c1
501 Ga0500610_0148746
502 Ga0500646_0000879
503 Ga0500583_0000486
504 Ga0500583_0138102
505 Ga0500566_0000009
506 Ga0500640_000068
507 Ga0500641_0006756
508 Ga0500641_0007005
509 Ga0500555_000948
510 Ga0500572_000070
511 Ga0500594_0036475
512 Ga0500595_006086
513 Ga0500614_001582
514 Ga0500618_002030
515 Ga0500642_0001433
516 Ga0500658_0000012
517 Ga0500658_0008065
518 Ga0500559_0004308
519 Ga0500559_0006553
520 Ga0500559_0011843
521 Ga0500568_0019450
522 Ga0500589_077219
523 Ga0500590_017166
524 Ga0500603_000387
525 Ga0500604_0001488
526 Ga0500619_000161
527 Ga0500630_000240
528 Ga0500639_000545
529 Ga0500636_0083862
530 Ga0500645_006522
531 Ga0500596_000198
532 Ga0500661_001600
533 Ga0501082_0037066
534 2829747185
535 2509150520
536 2513654450
537 2513859253
538 2513915371
539 2517892674
540 2524538156
541 2563055894
542 2671117399
543 2713482478
544 2828307311
545 2842694792
546 2876812620
547 2879116227
548 2885378494
549 2903750568
550 2904702810
551 2906618320
552 2906641493
553 2906664398
554 2922429778
555 2941510300
556 2941517963
557 2941525979
558 643597538
559 8006980761
560 8019557100
561 8019568201
562 8057535763

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00795

CN_hydrolase

Carbon-nitrogen hydrolase

81

368

0.9

Structural Annotation

Top 5 Hits

ID Description Score Start End
3wuy-assembly1.cif.gz_A crystal structure of nit6803 0.9492 1 288
3wuy-assembly1.cif.gz_A crystal structure of nit6803 0.9076 1 288
3iw3-assembly1.cif.gz_B crystal structure of hyperthermophilic nitrilase 0.881 6 297
6zby-assembly1.cif.gz_E cryo-em structure of the nitrilase from pseudomonas fluorescens ebc191 at 3.3 angstroms 0.8753 5 340
5h8j-assembly2.cif.gz_P crystal structure of medicago truncatula n-carbamoylputrescine amidohydrolase (mtcpa) in complex with cadaverine 0.8747 1 288
ID Description Score Start End Superfamily
3wuyB00 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.9492 1 288 3.60.110.10
3wuyB00 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.9076 1 288 3.60.110.10
af_P40447_2_198_3.60.110.10 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.8979 8 188 3.60.110.10
af_P32961_18_309_3.60.110.10 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.8658 5 288 3.60.110.10
1j31B00 Alpha Beta;4-Layer Sandwich;Nitrilase/N-carbamoyl-D-aminoacid amidohydrolase;Carbon-nitrogen hydrolase 0.8608 6 307 3.60.110.10
ID Description Score Start End GO Terms
AF-A0A4V0Z023-F1-model_v4 Carbon-nitrogen hydrolase family protein 0.9842 2 267 GO:0016787
AF-A0A259JWM0-F1-model_v4 Aliphatic nitrilase 0.9814 1 166 GO:0003824
AF-A0A135RRM8-F1-model_v4 O-methyltransferase 0.9779 1 270 GO:0008171
GO:0032259
AF-G2X3A0-F1-model_v4 Cyanide hydratase 0.9771 95 270 GO:0003824
AF-A0A522R571-F1-model_v4 Carbon-nitrogen hydrolase family protein 0.9761 1 253 GO:0016787

Map