F384268

General Info

Members Datasets Scaffolds Average Seq Length
281 188 256 210

Family's Representative Sequence

Representative Sequence 3300009177|Ga0105248_10072118|Ga0105248_100721184
Length 246
Sequence VPSPEAVAAATMRPEPDALPPDHSLAAYADPAPDDEPLVPVGVGPWPELPLPTDPHYDPQLLADGDRRNVVDRYRYWSREAIVADLDKRRHDFHVAIENWQHDFNIGTVVRNANAFLAREVHIVGRRRWNRRGAMVTDRYQHVRHHAELAELVSWARDAGLVIVGLDNVPDAVPLETTPLPRHCMMLFGQEGPGLSDAALASCDRIYSIAQFGSTRSINAGVASGIAMHAWIRSYVIDSHGAGDPP

Samples

Sample ID Description Type Environment
1 2501939600 Micromonospora sp. L5 Isolate Unclassified
2 2622736626 Micromonospora rhizosphaerae DSM 45431 Isolate Rhizosphere
3 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
4 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
5 2751185782 Actinoplanes subtropicus NRRL B-24665 Isolate Rhizosphere
6 2799112218 Motilibacter rhizosphaerae DSM 45622 Isolate Rhizosphere
7 2831935698 Jishengella sp. AZ1-13 Isolate Unclassified
8 2832004796 Micromonospora endophytica JCM 18317 Isolate Unclassified
9 2837183177 Egibacter rhizosphaerae EGI 80759 Isolate Unclassified
10 2856858025 Micromonospora aurantiaca 110B(2018) Isolate Unclassified
11 2857479173 Micrococcus sp. R-74225 Isolate Unclassified
12 2858868258 Micromonospora sp. MH33 Isolate Unclassified
13 2866065130 Micromonospora endophytica DSM 45430 Isolate Unclassified
14 2867302475 Micromonospora globbae WPS1-2 Isolate Unclassified
15 2867312974 Micromonospora musae NGC1-4 Isolate Unclassified
16 2867319477 Micromonospora musae MS1-9 Isolate Unclassified
17 2867507094 Micromonospora zingiberis PLAI 1-1 Isolate Unclassified
18 2880495981 Micromonospora vinacea DSM 101695 Isolate Unclassified
19 2902582711 Micromonospora sp. AP08 Isolate Unclassified
20 2984523437 Rhodococcus sp. SORGH_AS303 Isolate Aerial Root
21 2996221748 Micromonospora veneta CAP181 Isolate Unclassified
22 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
23 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
24 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
25 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
26 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
27 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
28 3300005339 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG Metagenome Rhizosphere
29 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
30 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
31 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
32 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
33 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
34 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
35 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
36 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
37 3300005457 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG Metagenome Rhizosphere
38 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
39 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
40 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
41 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
42 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
43 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
44 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
45 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
46 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
47 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
48 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
49 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
50 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
51 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
52 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
53 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
54 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
55 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
56 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
60 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
61 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
64 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
65 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
66 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025936 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
88 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028786 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 23_EM Metagenome Unclassified
92 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
93 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
94 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
95 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
96 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
97 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
98 3300031616 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 9_EM Metagenome Unclassified
99 3300031649 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 16_EM Metagenome Unclassified
100 3300031730 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 19_EM Metagenome Unclassified
101 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
102 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
103 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
104 3300031889 Wild Oat associated soil bacterial communities from Lone Jack Road, Encinitas, CA, USA - WO Metagenome Rhizosphere
105 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
106 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
107 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
108 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
109 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
110 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
111 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
112 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
113 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
114 3300035115 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_11 Metagenome Rhizosphere
115 3300035207 Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_NoN_16 Metagenome Rhizosphere
116 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
117 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
118 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
119 3300039062 Seagrass microbial communities from Seahorse Key, FL, USA - HH0818 Metagenome Unclassified
120 3300041492 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_2 MetaG Metagenome Unclassified
121 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
122 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
123 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
124 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
125 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
126 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
127 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
128 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
129 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
130 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
131 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
132 3300046500 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co1_23_3 rhizosphere Metagenome Rhizosphere
133 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
134 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
135 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
136 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
137 3300047321 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL3_98_5 rhizosphere Metagenome Rhizosphere
138 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
139 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
140 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
141 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
142 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
143 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
144 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
145 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
146 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
151 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
152 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
153 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
154 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
156 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
157 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
158 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
159 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
160 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
161 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
162 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
163 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
164 3300049680 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I13_B_3_drought Metagenome Rhizosphere
165 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
166 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
167 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
168 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
169 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
170 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
171 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
172 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
173 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
174 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
175 3300053090 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co3_31_39 endosphere Metagenome Endosphere
176 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
177 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
178 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
179 3300053109 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co2_52_27 endosphere Metagenome Endosphere
180 3300053118 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 endosphere Metagenome Endosphere
181 3300053126 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co1_12_9 endosphere Metagenome Endosphere
182 3300053131 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co3_35_48 endosphere Metagenome Endosphere
183 3300053159 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 endosphere Metagenome Endosphere
184 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
185 649633069 Micromonospora sp. L5 Isolate Unclassified
186 8055412473 Micromonospora phytophila DSM 105363 Isolate Nodule
187 8056060235 Nocardiopsis endophytica RSe5-2 Isolate Unclassified
188 8057568493 Actinorhabdospora filicis NBRC 111898 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 90.75
Metatranscriptomes 0.36
Isolates 8.9

Biome Distribution

Category Percentage (%)
Aerial Root 0.36
Bulb 0
Endosphere 4.63
Nodule 0.36
Rhizoplane 3.56
Rhizosphere 76.51
Stem 0
Stem Tuber 0
Unclassified 14.59

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070658_10303512 3300005327 Bacteria 1361
2 Ga0070683_100005287 3300005329 Bacteria 10751
3 Ga0070683_100064564 3300005329 Bacteria 3408
4 Ga0068869_100020617 3300005334 Bacteria 4523
5 Ga0070680_100057509 3300005336 Bacteria 3179
6 Ga0070680_100204117 3300005336 Bacteria 1667
7 Ga0070682_100149762 3300005337 Bacteria 1600
8 Ga0068868_100003896 3300005338 Bacteria 10417
9 Ga0070660_100109338 3300005339 Bacteria 2198
10 Ga0070660_100228719 3300005339 Bacteria 1513
11 Ga0070661_100041257 3300005344 Bacteria 3368
12 Ga0070692_10014307 3300005345 Bacteria 3723
13 Ga0070675_100001366 3300005354 Bacteria 17880
14 Ga0070674_100382217 3300005356 Bacteria 1146
15 Ga0070659_100001573 3300005366 Bacteria 16439
16 Ga0070659_100041121 3300005366 Bacteria 3613
17 Ga0070714_100555009 3300005435 Bacteria 1100
18 Ga0070700_100012532 3300005441 Bacteria 4736
19 Ga0070663_100001779 3300005455 Bacteria 11990
20 Ga0070662_100407706 3300005457 Bacteria 1123
21 Ga0068867_100237568 3300005459 Bacteria 1476
22 Ga0070672_100883584 3300005543 Bacteria 789
23 Ga0068855_100623406 3300005563 Bacteria 1161
24 Ga0070664_100004367 3300005564 Bacteria 11357
25 Ga0070664_100197650 3300005564 Bacteria 1793
26 Ga0070664_100434880 3300005564 Bacteria 1203
27 Ga0068857_100127454 3300005577 Bacteria 2294
28 Ga0068857_100198552 3300005577 Bacteria 1828
29 Ga0068852_100549652 3300005616 Bacteria 1155
30 Ga0068852_100694688 3300005616 Bacteria 1027
31 Ga0068863_100009084 3300005841 Bacteria 9704
32 Ga0068862_100018608 3300005844 Bacteria 5787
33 Ga0068862_100040096 3300005844 Bacteria 3980
34 Ga0068862_101132402 3300005844 Bacteria 779
35 Ga0081539_10007881 3300005985 Bacteria 9498
36 Ga0081539_10023577 3300005985 Bacteria 4026
37 Ga0075432_10125703 3300006058 Bacteria 967
38 Ga0075428_100423288 3300006844 Bacteria 1427
39 Ga0075428_100754133 3300006844 Bacteria 1035
40 Ga0075428_100878759 3300006844 Bacteria 951
41 Ga0075428_101040466 3300006844 Bacteria 866
42 Ga0075431_100000769 3300006847 Bacteria 27807
43 Ga0075429_100003160 3300006880 Bacteria 13999
44 Ga0075429_100018713 3300006880 Bacteria 5997
45 Ga0075429_100025975 3300006880 Bacteria 5084
46 Ga0075429_100086114 3300006880 Bacteria 2739
47 Ga0075429_100227390 3300006880 Bacteria 1634
48 Ga0068865_100290865 3300006881 Bacteria 1304
49 Ga0111539_10000482 3300009094 Bacteria 50429
50 Ga0111539_10001086 3300009094 Bacteria 35926
51 Ga0111539_10175932 3300009094 Bacteria 2500
52 Ga0111539_10475598 3300009094 Bacteria 1455
53 Ga0105245_10153705 3300009098 Bacteria 2178
54 Ga0105245_10660345 3300009098 Bacteria 1076
55 Ga0105247_10165307 3300009101 Bacteria 1468
56 Ga0114129_10015249 3300009147 Bacteria 10937
57 Ga0114129_11074304 3300009147 Bacteria 1009
58 Ga0105248_10072118 3300009177 Bacteria 3881
59 Ga0105238_10341779 3300009551 Bacteria 1485
60 Ga0105239_10026799 3300010375 Bacteria 6343
61 Ga0157370_10259262 3300013104 Bacteria 1607
62 Ga0157369_10020255 3300013105 Bacteria 7435
63 Ga0157369_10103142 3300013105 Bacteria 3038
64 Ga0157374_10955128 3300013296 Bacteria 876
65 Ga0157378_10276271 3300013297 Bacteria 1618
66 Ga0163163_10193364 3300014325 Bacteria 2083
67 Ga0163163_10672826 3300014325 Bacteria 1099
68 Ga0157377_10000649 3300014745 Bacteria 14517
69 Ga0206353_11357667 3300020082 Bacteria 2914
70 Ga0207692_10258834 3300025898 Bacteria 1045
71 Ga0207710_10115652 3300025900 Bacteria 1277
72 Ga0207688_10024715 3300025901 Bacteria 3296
73 Ga0207705_10494762 3300025909 Bacteria 949
74 Ga0207657_10177777 3300025919 Bacteria 1721
75 Ga0207649_10005230 3300025920 Bacteria 7009
76 Ga0207659_10000900 3300025926 Bacteria 17696
77 Ga0207690_10001104 3300025932 Bacteria 17213
78 Ga0207690_10137249 3300025932 Bacteria 1797
79 Ga0207706_10048742 3300025933 Bacteria 3746
80 Ga0207670_10241913 3300025936 Bacteria 1391
81 Ga0207689_10013277 3300025942 Bacteria 7025
82 Ga0207661_10002769 3300025944 Bacteria 12081
83 Ga0207679_10001380 3300025945 Bacteria 15313
84 Ga0207679_10222421 3300025945 Bacteria 1589
85 Ga0207679_10350632 3300025945 Bacteria 1286
86 Ga0207667_10617029 3300025949 Bacteria 1092
87 Ga0207668_10000472 3300025972 Bacteria 25246
88 Ga0207703_10090100 3300026035 Bacteria 2577
89 Ga0207678_10018503 3300026067 Bacteria 6118
90 Ga0207678_10181895 3300026067 Bacteria 1795
91 Ga0207708_10021836 3300026075 Bacteria 4830
92 Ga0207648_10195031 3300026089 Bacteria 1796
93 Ga0207676_10259932 3300026095 Bacteria 1567
94 Ga0207676_10362231 3300026095 Bacteria 1344
95 Ga0207674_10143534 3300026116 Bacteria 2346
96 Ga0207428_10189268 3300027907 Bacteria 1552
97 Ga0268266_10024225 3300028379 Bacteria 5165
98 Ga0268266_10264353 3300028379 Bacteria 1595
99 Ga0268265_10149154 3300028380 Bacteria 1970
100 Ga0268265_10235090 3300028380 Bacteria 1613
101 Ga0268264_10030699 3300028381 Bacteria 4405
102 Ga0307517_10067639 3300028786 Bacteria 3267
103 Ga0307515_10010935 3300028794 Bacteria 17302
104 Ga0307515_10038546 3300028794 Bacteria 7639
105 Ga0307512_10052860 3300030522 Bacteria 3235
106 Ga0307512_10093116 3300030522 Bacteria 2087
107 Ga0265327_10000001 3300031251 Bacteria 894475
108 Ga0307513_10002141 3300031456 Bacteria 27664
109 Ga0307509_10011142 3300031507 Bacteria 10936
110 Ga0307408_100252971 3300031548 Bacteria 1454
111 Ga0307508_10005290 3300031616 Bacteria 12316
112 Ga0307508_10357342 3300031616 Bacteria 1052
113 Ga0307514_10099900 3300031649 Bacteria 2087
114 Ga0307516_10225977 3300031730 Bacteria 1578
115 Ga0307405_10065920 3300031731 Bacteria 2307
116 Ga0307413_10071529 3300031824 Bacteria 2186
117 Ga0307413_10195447 3300031824 Bacteria 1456
118 Ga0307410_10014546 3300031852 Bacteria 4635
119 Ga0307410_10017278 3300031852 Bacteria 4327
120 Ga0307410_10157497 3300031852 Bacteria 1698
121 Ga0326468_10003718 3300031889 Bacteria 1304
122 Ga0307406_10028576 3300031901 Bacteria 3370
123 Ga0307406_10317506 3300031901 Bacteria 1204
124 Ga0307407_10016696 3300031903 Bacteria 3661
125 Ga0307407_10019712 3300031903 Bacteria 3440
126 Ga0307407_10315426 3300031903 Bacteria 1095
127 Ga0307407_10335010 3300031903 Bacteria 1066
128 Ga0307412_10239704 3300031911 Bacteria 1402
129 Ga0307409_100018078 3300031995 Bacteria 4724
130 Ga0307409_100025826 3300031995 Bacteria 4129
131 Ga0307409_100043049 3300031995 Bacteria 3386
132 Ga0307409_100329374 3300031995 Bacteria 1432
133 Ga0307416_100034892 3300032002 Bacteria 3834
134 Ga0307416_100035990 3300032002 Bacteria 3790
135 Ga0307416_100091826 3300032002 Bacteria 2609
136 Ga0307416_100142868 3300032002 Bacteria 2179
137 Ga0307416_100146782 3300032002 Bacteria 2155
138 Ga0307416_100157849 3300032002 Bacteria 2091
139 Ga0307414_10011056 3300032004 Bacteria 5278
140 Ga0307414_10289989 3300032004 Bacteria 1379
141 Ga0307411_10066504 3300032005 Bacteria 2422
142 Ga0307411_10067726 3300032005 Bacteria 2404
143 Ga0307415_100003001 3300032126 Bacteria 8493
144 Ga0307415_100006645 3300032126 Bacteria 6258
145 Ga0307415_100007492 3300032126 Bacteria 5973
146 Ga0307415_100047362 3300032126 Bacteria 2894
147 Ga0307415_100052270 3300032126 Bacteria 2777
148 Ga0307415_100138662 3300032126 Bacteria 1854
149 Ga0307415_100181807 3300032126 Bacteria 1650
150 Ga0307415_100585048 3300032126 Bacteria 991
151 Ga0307415_100791816 3300032126 Bacteria 864
152 Ga0307507_10063021 3300033179 Bacteria 3437
153 Ga0373941_0001878 3300035115 Bacteria 4546
154 Ga0373942_0000760 3300035207 Bacteria 8868
155 Ga0316574_0098377 3300035398 Bacteria 1871
156 Ga0395900_0043260 3300037418 Bacteria 4642
157 Ga0436364_0636692 3300037853 Bacteria 1735
158 Ga0400483_017897 3300039062 Bacteria 1383
159 Ga0400483_062449 3300039062 Bacteria 34296
160 Ga0400483_155225 3300039062 Bacteria 28956
161 Ga0400483_206981 3300039062 Bacteria 4948
162 Ga0400483_261778 3300039062 Bacteria 3380
163 Ga0400483_278316 3300039062 Bacteria 4096
164 Ga0451835_0637254 3300041492 Bacteria 697
165 Ga0451835_0858836 3300041492 Bacteria 721
166 Ga0451853_0129175 3300041512 Bacteria 6099
167 Ga0439463_062081 3300042016 Bacteria 955
168 Ga0466963_0009829 3300044694 Bacteria 5774
169 Ga0466963_0018602 3300044694 Bacteria 4347
170 Ga0466963_0148629 3300044694 Bacteria 1626
171 Ga0466963_0360509 3300044694 Bacteria 1024
172 Ga0466971_0073493 3300044719 Bacteria 1554
173 Ga0466970_0470709 3300044765 Bacteria 722
174 Ga0466957_0022597 3300044842 Bacteria 3713
175 Ga0466960_0209775 3300044901 Bacteria 1068
176 Ga0466958_0001706 3300045836 Bacteria 10599
177 Ga0466958_0080497 3300045836 Bacteria 2004
178 Ga0466958_0534217 3300045836 Bacteria 762
179 Ga0466967_0090556 3300045976 Bacteria 2779
180 Ga0466967_0161518 3300045976 Bacteria 2103
181 Ga0466967_0535741 3300045976 Bacteria 1151
182 Ga0495629_0106663 3300046459 Bacteria 1954
183 Ga0495594_0002125 3300046499 Bacteria 10318
184 Ga0495596_0170987 3300046500 Bacteria 845
185 Ga0495608_0181878 3300046511 Bacteria 1330
186 Ga0495668_0188430 3300046616 Bacteria 1130
187 Ga0495600_0094558 3300046809 Bacteria 1949
188 Ga0495674_0100169 3300047319 Bacteria 2466
189 Ga0495676_0338009 3300047321 Bacteria 1009
190 Ga0496102_0525853 3300048905 Bacteria 1105
191 Ga0496105_0081608 3300048908 Bacteria 2671
192 Ga0496108_0000019 3300048911 Bacteria 234657
193 Ga0496109_0792425 3300048912 Bacteria 886
194 Ga0496112_0122252 3300048915 Bacteria 2574
195 Ga0496112_0137748 3300048915 Bacteria 2410
196 Ga0496112_0211286 3300048915 Bacteria 1897
197 Ga0496113_0007833 3300048916 Bacteria 6904
198 Ga0496113_0055243 3300048916 Bacteria 2976
199 Ga0496114_0085356 3300048917 Bacteria 2674
200 Ga0496126_0063960 3300048929 Bacteria 3296
201 Ga0501031_0009800 3300049568 Bacteria 6236
202 Ga0501032_0014470 3300049569 Bacteria 5587
203 Ga0501033_0714628 3300049570 Bacteria 681
204 Ga0501034_0000666 3300049571 Bacteria 52372
205 Ga0501034_0001836 3300049571 Bacteria 26950
206 Ga0501034_0212183 3300049571 Bacteria 1891
207 Ga0501036_0203948 3300049572 Bacteria 1663
208 Ga0501037_0020313 3300049573 Bacteria 4903
209 Ga0501037_0040777 3300049573 Bacteria 3416
210 Ga0501037_0571430 3300049573 Bacteria 761
211 Ga0501038_0179778 3300049574 Bacteria 1707
212 Ga0501043_0040789 3300049579 Bacteria 3648
213 Ga0501046_0011948 3300049580 Bacteria 7408
214 Ga0501047_0033277 3300049581 Bacteria 4975
215 Ga0501048_0001390 3300049582 Bacteria 18336
216 Ga0501068_0000098 3300049584 Bacteria 37486
217 Ga0501069_0134100 3300049585 Bacteria 1419
218 Ga0501070_0044736 3300049586 Bacteria 3682
219 Ga0501072_0007600 3300049588 Bacteria 8224
220 Ga0501073_0000578 3300049589 Bacteria 25821
221 Ga0501074_0000333 3300049590 Bacteria 27445
222 Ga0501076_0076566 3300049592 Bacteria 2683
223 Ga0501250_031530 3300049680 Bacteria 739
224 Ga0501080_0002292 3300049742 Bacteria 16670
225 Ga0501080_0430785 3300049742 Bacteria 1184
226 Ga0501083_0007094 3300049744 Bacteria 7956
227 Ga0501083_0070052 3300049744 Bacteria 2333
228 Ga0501035_0006452 3300049822 Bacteria 11015
229 Ga0501035_0189797 3300049822 Bacteria 1767
230 Ga0501044_0210144 3300049823 Bacteria 1900
231 Ga0501044_0541399 3300049823 Bacteria 1062
232 nmdc:mga00v17_112735_c1 3300050491 Bacteria 1726
233 nmdc:mga05p37_56944_c1 3300050507 Bacteria 4814
234 nmdc:mga05p37_758633_c1 3300050507 Bacteria 1068
235 nmdc:mga09592_263703_c1 3300050508 Bacteria 1494
236 nmdc:mga09592_77471_c1 3300050508 Bacteria 2828
237 nmdc:mga09592_91138_c1 3300050508 Bacteria 2605
238 nmdc:mga06r32_17855_c1 3300050510 Bacteria 6484
239 nmdc:mga06r32_4073_c1 3300050510 Bacteria 13099
240 nmdc:mga06r32_50672_c1 3300050510 Bacteria 3971
241 nmdc:mga08y16_39575_c1 3300050511 Bacteria 4947
242 nmdc:mga08y16_84106_c1 3300050511 Bacteria 3317
243 nmdc:mga08y16_9272_c1 3300050511 Bacteria 10326
244 Ga0500644_0011368 3300053088 Bacteria 2431
245 Ga0500644_0079464 3300053088 Bacteria 1202
246 Ga0500646_0005967 3300053090 Bacteria 3090
247 Ga0500651_0075509 3300053093 Bacteria 2094
248 Ga0500641_0012792 3300053096 Bacteria 3072
249 Ga0500641_0130338 3300053096 Bacteria 1085
250 Ga0500562_077113 3300053108 Bacteria 901
251 Ga0500569_001117 3300053109 Bacteria 4928
252 Ga0500594_0013668 3300053118 Bacteria 1932
253 Ga0500621_157944 3300053126 Bacteria 844
254 Ga0500652_019267 3300053131 Bacteria 2532
255 Ga0500630_124788 3300053159 Bacteria 1134
256 Ga0530510_0041878 3300061734 Bacteria 3307

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300006844 Ga0075428_101040466 Ga0075428_1010404661 189
2 3300006880 Ga0075429_100086114 Ga0075429_1000861143 189
3 3300009147 Ga0114129_11074304 Ga0114129_110743042 189
4 3300006844 Ga0075428_100878759 Ga0075428_1008787592 190
5 3300006880 Ga0075429_100018713 Ga0075429_1000187138 190
6 3300009147 Ga0114129_10015249 Ga0114129_100152496 190
7 3300044694 Ga0466963_0148629 Ga0466963_0148629_886_1512 190
8 3300044719 Ga0466971_0073493 Ga0466971_0073493_17_643 190
9 3300044842 Ga0466957_0022597 Ga0466957_0022597_2371_2997 190
10 3300045836 Ga0466958_0001706 Ga0466958_0001706_1117_1743 190
11 3300050507 nmdc:mga05p37_56944_c1 nmdc:mga05p37_56944_c1_1566_2204 190
12 3300050508 nmdc:mga09592_91138_c1 nmdc:mga09592_91138_c1_1832_2470 190
13 3300046511 Ga0495608_0181878 Ga0495608_0181878_50_754 191
14 3300047319 Ga0495674_0100169 Ga0495674_0100169_1000_1704 191
15 3300026095 Ga0207676_10259932 Ga0207676_102599322 192
16 3300005985 Ga0081539_10007881 Ga0081539_1000788113 193
17 3300005985 Ga0081539_10023577 Ga0081539_100235773 193
18 3300006058 Ga0075432_10125703 Ga0075432_101257032 193
19 3300013105 Ga0157369_10103142 Ga0157369_101031423 193
20 3300031507 Ga0307509_10011142 Ga0307509_1001114211 193
21 3300033179 Ga0307507_10063021 Ga0307507_100630212 193
22 3300039062 Ga0400483_062449 Ga0400483_062449_3190_3819 194
23 3300039062 Ga0400483_155225 Ga0400483_155225_4604_5233 194
24 3300009094 Ga0111539_10175932 Ga0111539_101759322 195
25 3300009094 Ga0111539_10475598 Ga0111539_104755982 195
26 3300025944 Ga0207661_10002769 Ga0207661_100027699 195
27 3300045976 Ga0466967_0535741 Ga0466967_0535741_93_689 195
28 3300050511 nmdc:mga08y16_84106_c1 nmdc:mga08y16_84106_c1_932_1567 195
29 3300005356 Ga0070674_100382217 Ga0070674_1003822171 196
30 3300005543 Ga0070672_100883584 Ga0070672_1008835841 196
31 3300006880 Ga0075429_100003160 Ga0075429_1000031607 196
32 3300025901 Ga0207688_10024715 Ga0207688_100247153 196
33 3300044694 Ga0466963_0360509 Ga0466963_0360509_260_868 196
34 3300045836 Ga0466958_0534217 Ga0466958_0534217_33_641 196
35 3300050510 nmdc:mga06r32_17855_c1 nmdc:mga06r32_17855_c1_4172_4825 196
36 3300031251 Ga0265327_10000001 Ga0265327_10000001633 197
37 3300031730 Ga0307516_10225977 Ga0307516_102259772 197
38 3300044694 Ga0466963_0009829 Ga0466963_0009829_378_1019 197
39 3300045976 Ga0466967_0090556 Ga0466967_0090556_1732_2373 197
40 iso_pu_bacteria 8057568493 8057575216 197
41 3300005336 Ga0070680_100057509 Ga0070680_1000575092 198
42 3300046809 Ga0495600_0094558 Ga0495600_0094558_534_1148 198
43 3300047321 Ga0495676_0338009 Ga0495676_0338009_106_720 198
44 3300048905 Ga0496102_0525853 Ga0496102_0525853_196_801 198
45 3300048917 Ga0496114_0085356 Ga0496114_0085356_1445_2050 198
46 3300049573 Ga0501037_0020313 Ga0501037_0020313_2789_3472 198
47 3300049574 Ga0501038_0179778 Ga0501038_0179778_334_1017 198
48 3300049585 Ga0501069_0134100 Ga0501069_0134100_19_690 198
49 3300049822 Ga0501035_0189797 Ga0501035_0189797_707_1390 198
50 iso_pu_bacteria 2501939600 2501941850 198
51 iso_pu_bacteria 2622736626 2623586444 198
52 iso_pu_bacteria 2831935698 2831939910 198
53 iso_pu_bacteria 2832004796 2832007362 198
54 iso_pu_bacteria 2856858025 2856860359 198
55 iso_pu_bacteria 2858868258 2858871837 198
56 iso_pu_bacteria 2866065130 2866070855 198
57 iso_pu_bacteria 2867302475 2867303824 198
58 iso_pu_bacteria 2867312974 2867313338 198
59 iso_pu_bacteria 2867319477 2867325779 198
60 iso_pu_bacteria 2867507094 2867509319 198
61 iso_pu_bacteria 2902582711 2902586374 198
62 iso_pu_bacteria 2996221748 2996224806 198
63 iso_pu_bacteria 649633069 649811098 198
64 3300005329 Ga0070683_100005287 Ga0070683_1000052875 199
65 3300005339 Ga0070660_100109338 Ga0070660_1001093382 199
66 3300005366 Ga0070659_100001573 Ga0070659_1000015736 199
67 3300005564 Ga0070664_100434880 Ga0070664_1004348802 199
68 3300005577 Ga0068857_100198552 Ga0068857_1001985522 199
69 3300025932 Ga0207690_10001104 Ga0207690_1000110410 199
70 3300025945 Ga0207679_10350632 Ga0207679_103506321 199
71 3300031616 Ga0307508_10357342 Ga0307508_103573422 199
72 3300032126 Ga0307415_100047362 Ga0307415_1000473625 199
73 3300049570 Ga0501033_0714628 Ga0501033_0714628_22_639 199
74 3300049823 Ga0501044_0541399 Ga0501044_0541399_186_803 199
75 3300050510 nmdc:mga06r32_50672_c1 nmdc:mga06r32_50672_c1_401_1081 199
76 iso_pu_bacteria 2738543034 2739362372 199
77 3300005563 Ga0068855_100623406 Ga0068855_1006234063 200
78 3300013105 Ga0157369_10020255 Ga0157369_100202555 200
79 3300025949 Ga0207667_10617029 Ga0207667_106170293 200
80 3300031548 Ga0307408_100252971 Ga0307408_1002529712 200
81 3300031731 Ga0307405_10065920 Ga0307405_100659204 200
82 3300031824 Ga0307413_10195447 Ga0307413_101954471 200
83 3300031852 Ga0307410_10014546 Ga0307410_100145462 200
84 3300031889 Ga0326468_10003718 Ga0326468_100037181 200
85 3300031903 Ga0307407_10019712 Ga0307407_100197123 200
86 3300031911 Ga0307412_10239704 Ga0307412_102397042 200
87 3300032002 Ga0307416_100035990 Ga0307416_1000359903 200
88 3300032004 Ga0307414_10289989 Ga0307414_102899892 200
89 3300032005 Ga0307411_10066504 Ga0307411_100665043 200
90 3300032126 Ga0307415_100791816 Ga0307415_1007918161 200
91 3300037418 Ga0395900_0043260 Ga0395900_0043260_1342_1959 200
92 3300042016 Ga0439463_062081 Ga0439463_062081_190_807 200
93 3300049580 Ga0501046_0011948 Ga0501046_0011948_3145_3828 200
94 3300049823 Ga0501044_0210144 Ga0501044_0210144_626_1309 200
95 3300050491 nmdc:mga00v17_112735_c1 nmdc:mga00v17_112735_c1_646_1314 200
96 3300050507 nmdc:mga05p37_758633_c1 nmdc:mga05p37_758633_c1_121_744 200
97 iso_pu_bacteria 2744054611 2744957859 200
98 iso_pu_bacteria 2837183177 2837184719 200
99 iso_pu_bacteria 2880495981 2880498585 200
100 iso_pu_bacteria 8055412473 8055417077 200
101 3300005329 Ga0070683_100064564 Ga0070683_1000645642 201
102 3300005334 Ga0068869_100020617 Ga0068869_1000206175 201
103 3300005336 Ga0070680_100204117 Ga0070680_1002041172 201
104 3300005338 Ga0068868_100003896 Ga0068868_1000038963 201
105 3300005339 Ga0070660_100228719 Ga0070660_1002287192 201
106 3300005344 Ga0070661_100041257 Ga0070661_1000412574 201
107 3300005345 Ga0070692_10014307 Ga0070692_100143073 201
108 3300005354 Ga0070675_100001366 Ga0070675_10000136623 201
109 3300005366 Ga0070659_100041121 Ga0070659_1000411212 201
110 3300005441 Ga0070700_100012532 Ga0070700_1000125324 201
111 3300005455 Ga0070663_100001779 Ga0070663_10000177915 201
112 3300005457 Ga0070662_100407706 Ga0070662_1004077061 201
113 3300005459 Ga0068867_100237568 Ga0068867_1002375682 201
114 3300005564 Ga0070664_100004367 Ga0070664_10000436710 201
115 3300005577 Ga0068857_100127454 Ga0068857_1001274542 201
116 3300005616 Ga0068852_100694688 Ga0068852_1006946882 201
117 3300006880 Ga0075429_100227390 Ga0075429_1002273903 201
118 3300009094 Ga0111539_10000482 Ga0111539_1000048238 201
119 3300009098 Ga0105245_10153705 Ga0105245_101537051 201
120 3300010375 Ga0105239_10026799 Ga0105239_100267998 201
121 3300014745 Ga0157377_10000649 Ga0157377_1000064918 201
122 3300025919 Ga0207657_10177777 Ga0207657_101777772 201
123 3300025920 Ga0207649_10005230 Ga0207649_100052303 201
124 3300025926 Ga0207659_10000900 Ga0207659_100009009 201
125 3300025932 Ga0207690_10137249 Ga0207690_101372493 201
126 3300025933 Ga0207706_10048742 Ga0207706_100487422 201
127 3300025936 Ga0207670_10241913 Ga0207670_102419132 201
128 3300025942 Ga0207689_10013277 Ga0207689_100132777 201
129 3300025945 Ga0207679_10001380 Ga0207679_1000138020 201
130 3300026035 Ga0207703_10090100 Ga0207703_100901003 201
131 3300026067 Ga0207678_10018503 Ga0207678_100185034 201
132 3300026075 Ga0207708_10021836 Ga0207708_100218365 201
133 3300026089 Ga0207648_10195031 Ga0207648_101950311 201
134 3300026095 Ga0207676_10362231 Ga0207676_103622312 201
135 3300026116 Ga0207674_10143534 Ga0207674_101435343 201
136 3300028380 Ga0268265_10235090 Ga0268265_102350903 201
137 3300028794 Ga0307515_10010935 Ga0307515_100109353 201
138 3300031995 Ga0307409_100043049 Ga0307409_1000430494 201
139 3300032002 Ga0307416_100157849 Ga0307416_1001578494 201
140 3300032126 Ga0307415_100052270 Ga0307415_1000522702 201
141 3300037853 Ga0436364_0636692 Ga0436364_0636692_452_1087 201
142 3300050508 nmdc:mga09592_263703_c1 nmdc:mga09592_263703_c1_856_1473 201
143 3300050511 nmdc:mga08y16_39575_c1 nmdc:mga08y16_39575_c1_2848_3465 201
144 iso_pu_bacteria 2751185782 2753270556 201
145 3300014325 Ga0163163_10672826 Ga0163163_106728261 202
146 3300026067 Ga0207678_10181895 Ga0207678_101818952 202
147 3300028786 Ga0307517_10067639 Ga0307517_100676393 202
148 3300028794 Ga0307515_10038546 Ga0307515_100385463 202
149 3300030522 Ga0307512_10052860 Ga0307512_100528603 202
150 3300031456 Ga0307513_10002141 Ga0307513_1000214122 202
151 3300031616 Ga0307508_10005290 Ga0307508_1000529015 202
152 3300031649 Ga0307514_10099900 Ga0307514_100999002 202
153 3300031901 Ga0307406_10028576 Ga0307406_100285762 202
154 3300031901 Ga0307406_10317506 Ga0307406_103175062 202
155 3300031995 Ga0307409_100329374 Ga0307409_1003293742 202
156 3300032002 Ga0307416_100142868 Ga0307416_1001428682 202
157 3300039062 Ga0400483_206981 Ga0400483_206981_3041_3694 202
158 3300039062 Ga0400483_261778 Ga0400483_261778_1474_2127 202
159 3300041492 Ga0451835_0637254 Ga0451835_0637254_69_677 202
160 3300041492 Ga0451835_0858836 Ga0451835_0858836_64_687 202
161 3300053088 Ga0500644_0011368 Ga0500644_0011368_1517_2140 202
162 3300053088 Ga0500644_0079464 Ga0500644_0079464_516_1142 202
163 3300053090 Ga0500646_0005967 Ga0500646_0005967_1600_2223 202
164 3300053093 Ga0500651_0075509 Ga0500651_0075509_1361_1984 202
165 3300053096 Ga0500641_0012792 Ga0500641_0012792_847_1470 202
166 3300053108 Ga0500562_077113 Ga0500562_077113_52_675 202
167 3300053109 Ga0500569_001117 Ga0500569_001117_2029_2652 202
168 3300053118 Ga0500594_0013668 Ga0500594_0013668_561_1184 202
169 3300053126 Ga0500621_157944 Ga0500621_157944_18_641 202
170 3300053131 Ga0500652_019267 Ga0500652_019267_1409_2032 202
171 3300005844 Ga0068862_100040096 Ga0068862_1000400965 203
172 3300009098 Ga0105245_10660345 Ga0105245_106603452 203
173 3300049571 Ga0501034_0001836 Ga0501034_0001836_21605_22273 203
174 3300013296 Ga0157374_10955128 Ga0157374_109551281 204
175 3300032002 Ga0307416_100146782 Ga0307416_1001467822 204
176 3300032126 Ga0307415_100585048 Ga0307415_1005850481 204
177 3300044694 Ga0466963_0018602 Ga0466963_0018602_1345_1971 204
178 3300044901 Ga0466960_0209775 Ga0466960_0209775_254_895 204
179 3300045836 Ga0466958_0080497 Ga0466958_0080497_27_653 204
180 3300048911 Ga0496108_0000019 Ga0496108_0000019_81672_82301 204
181 3300049571 Ga0501034_0000666 Ga0501034_0000666_13647_14279 204
182 3300049573 Ga0501037_0571430 Ga0501037_0571430_24_656 204
183 3300049584 Ga0501068_0000098 Ga0501068_0000098_13713_14345 204
184 3300049588 Ga0501072_0007600 Ga0501072_0007600_5451_6083 204
185 3300049589 Ga0501073_0000578 Ga0501073_0000578_5172_5804 204
186 3300049590 Ga0501074_0000333 Ga0501074_0000333_8243_8875 204
187 3300049592 Ga0501076_0076566 Ga0501076_0076566_842_1474 204
188 3300049742 Ga0501080_0002292 Ga0501080_0002292_10807_11439 204
189 3300049742 Ga0501080_0430785 Ga0501080_0430785_460_1083 204
190 3300049744 Ga0501083_0007094 Ga0501083_0007094_2412_3047 204
191 3300049744 Ga0501083_0070052 Ga0501083_0070052_1598_2230 204
192 3300053096 Ga0500641_0130338 Ga0500641_0130338_234_863 204
193 3300005844 Ga0068862_101132402 Ga0068862_1011324021 205
194 3300006844 Ga0075428_100754133 Ga0075428_1007541331 205
195 3300009094 Ga0111539_10001086 Ga0111539_1000108626 205
196 3300025972 Ga0207668_10000472 Ga0207668_1000047221 205
197 3300030522 Ga0307512_10093116 Ga0307512_100931163 205
198 3300031824 Ga0307413_10071529 Ga0307413_100715293 205
199 3300031903 Ga0307407_10335010 Ga0307407_103350102 205
200 3300031995 Ga0307409_100018078 Ga0307409_1000180781 205
201 3300032005 Ga0307411_10067726 Ga0307411_100677264 205
202 3300032126 Ga0307415_100181807 Ga0307415_1001818071 205
203 3300035398 Ga0316574_0098377 Ga0316574_0098377_302_1006 205
204 3300039062 Ga0400483_017897 Ga0400483_017897_83_811 205
205 3300039062 Ga0400483_278316 Ga0400483_278316_206_898 205
206 3300041512 Ga0451853_0129175 Ga0451853_0129175_2311_2943 205
207 3300048915 Ga0496112_0122252 Ga0496112_0122252_1817_2437 205
208 3300050511 nmdc:mga08y16_9272_c1 nmdc:mga08y16_9272_c1_8084_8716 205
209 3300053159 Ga0500630_124788 Ga0500630_124788_391_1023 205
210 iso_pu_bacteria 2984523437 2984527544 205
211 3300031852 Ga0307410_10017278 Ga0307410_100172785 206
212 3300031903 Ga0307407_10016696 Ga0307407_100166963 206
213 3300032002 Ga0307416_100034892 Ga0307416_1000348922 206
214 3300032004 Ga0307414_10011056 Ga0307414_100110563 206
215 3300032126 Ga0307415_100003001 Ga0307415_1000030015 206
216 3300044765 Ga0466970_0470709 Ga0466970_0470709_18_659 206
217 3300046500 Ga0495596_0170987 Ga0495596_0170987_120_764 206
218 3300046616 Ga0495668_0188430 Ga0495668_0188430_136_780 206
219 3300048929 Ga0496126_0063960 Ga0496126_0063960_852_1523 206
220 3300049680 Ga0501250_031530 Ga0501250_031530_19_663 206
221 iso_pu_bacteria 2857479173 2857480782 206
222 3300005337 Ga0070682_100149762 Ga0070682_1001497622 207
223 3300005564 Ga0070664_100197650 Ga0070664_1001976502 207
224 3300006847 Ga0075431_100000769 Ga0075431_1000007694 207
225 3300006880 Ga0075429_100025975 Ga0075429_1000259754 207
226 3300006881 Ga0068865_100290865 Ga0068865_1002908651 207
227 3300025898 Ga0207692_10258834 Ga0207692_102588341 207
228 3300025945 Ga0207679_10222421 Ga0207679_102224212 207
229 3300031852 Ga0307410_10157497 Ga0307410_101574972 207
230 3300031903 Ga0307407_10315426 Ga0307407_103154262 207
231 3300031995 Ga0307409_100025826 Ga0307409_1000258263 207
232 3300032002 Ga0307416_100091826 Ga0307416_1000918262 207
233 3300032126 Ga0307415_100006645 Ga0307415_1000066452 207
234 3300048912 Ga0496109_0792425 Ga0496109_0792425_78_713 207
235 3300050508 nmdc:mga09592_77471_c1 nmdc:mga09592_77471_c1_1883_2527 207
236 3300050510 nmdc:mga06r32_4073_c1 nmdc:mga06r32_4073_c1_8211_8855 207
237 3300061734 Ga0530510_0041878 Ga0530510_0041878_2026_2736 207
238 iso_pu_bacteria 8056060235 8056061254 207
239 3300005616 Ga0068852_100549652 Ga0068852_1005496521 208
240 3300027907 Ga0207428_10189268 Ga0207428_101892683 208
241 3300005841 Ga0068863_100009084 Ga0068863_1000090843 209
242 3300009101 Ga0105247_10165307 Ga0105247_101653072 209
243 3300025900 Ga0207710_10115652 Ga0207710_101156522 209
244 3300028379 Ga0268266_10264353 Ga0268266_102643531 209
245 3300046459 Ga0495629_0106663 Ga0495629_0106663_659_1408 209
246 3300046499 Ga0495594_0002125 Ga0495594_0002125_651_1400 209
247 3300048908 Ga0496105_0081608 Ga0496105_0081608_1627_2334 209
248 3300048915 Ga0496112_0137748 Ga0496112_0137748_1252_1959 209
249 3300048915 Ga0496112_0211286 Ga0496112_0211286_1076_1783 209
250 3300048916 Ga0496113_0055243 Ga0496113_0055243_1652_2359 209
251 3300013104 Ga0157370_10259262 Ga0157370_102592622 210
252 3300005844 Ga0068862_100018608 Ga0068862_1000186085 211
253 3300013297 Ga0157378_10276271 Ga0157378_102762712 211
254 3300014325 Ga0163163_10193364 Ga0163163_101933642 211
255 3300028380 Ga0268265_10149154 Ga0268265_101491543 211
256 3300028381 Ga0268264_10030699 Ga0268264_100306995 211
257 3300032126 Ga0307415_100007492 Ga0307415_1000074923 212
258 3300006844 Ga0075428_100423288 Ga0075428_1004232881 213
259 3300032126 Ga0307415_100138662 Ga0307415_1001386622 213
260 iso_pu_bacteria 2799112218 2799182975 214
261 3300028379 Ga0268266_10024225 Ga0268266_100242257 216
262 3300035115 Ga0373941_0001878 Ga0373941_0001878_3234_3911 217
263 3300035207 Ga0373942_0000760 Ga0373942_0000760_1157_1834 217
264 3300009177 Ga0105248_10072118 Ga0105248_100721184 219
265 3300009551 Ga0105238_10341779 Ga0105238_103417792 219
266 3300020082 Ga0206353_11357667 Ga0206353_113576673 219
267 3300025909 Ga0207705_10494762 Ga0207705_104947621 219
268 3300049568 Ga0501031_0009800 Ga0501031_0009800_4904_5581 219
269 3300049569 Ga0501032_0014470 Ga0501032_0014470_96_773 219
270 3300049571 Ga0501034_0212183 Ga0501034_0212183_1020_1697 219
271 3300049572 Ga0501036_0203948 Ga0501036_0203948_108_785 219
272 3300049573 Ga0501037_0040777 Ga0501037_0040777_2474_3151 219
273 3300049579 Ga0501043_0040789 Ga0501043_0040789_1302_1979 219
274 3300049581 Ga0501047_0033277 Ga0501047_0033277_1643_2329 219
275 3300049582 Ga0501048_0001390 Ga0501048_0001390_9535_10212 219
276 3300049586 Ga0501070_0044736 Ga0501070_0044736_2937_3614 219
277 3300049822 Ga0501035_0006452 Ga0501035_0006452_7653_8330 219
278 3300045976 Ga0466967_0161518 Ga0466967_0161518_1230_1913 224
279 3300005435 Ga0070714_100555009 Ga0070714_1005550092 225
280 3300048916 Ga0496113_0007833 Ga0496113_0007833_4701_5381 225
281 3300005327 Ga0070658_10303512 Ga0070658_103035122 228

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00588

SpoU_methylase

SpoU rRNA Methylase family

92

229

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
2ha8-assembly1.cif.gz_B methyltransferase domain of human tar (hiv-1) rna binding protein 1 0.8758 82 222
1ipa-assembly1.cif.gz_A crystal structure of rna 2'-o ribose methyltransferase 0.8658 83 222
7qiu-assembly1.cif.gz_B ysga 23s rna methyltransferase from bacillus subtilis 0.8612 78 219
1x7o-assembly1.cif.gz_B crystal structure of the spou methyltransferase avirb from streptomyces viridochromogenes 0.8561 73 222
1x7p-assembly1.cif.gz_B crystal structure of the spou methyltransferase avirb from streptomyces viridochromogenes in complex with the cofactor adomet 0.8553 74 222
ID Description Score Start End Superfamily
af_O53715_16_181_3.40.1280.10 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.9747 64 227 3.40.1280.10
af_O53715_16_181_3.40.1280.10 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.9575 64 227 3.40.1280.10
af_Q8GYT1_4_157_3.40.1280.10 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.907 81 219 3.40.1280.10
af_A0A1D6F0W4_35_149_3.40.1280.10 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.8895 135 221 3.40.1280.10
1x7pB02 Alpha Beta;3-Layer(aba) Sandwich;Alpha/beta knot;SPOUT methyltransferase, trefoil knot domain 0.8777 79 222 3.40.1280.10
ID Description Score Start End GO Terms
AF-A0A7W2CB51-F1-model_v4 RNA methyltransferase 0.9821 32 225 GO:0003723
GO:0006396
GO:0008173
GO:0032259
AF-M7MKP9-F1-model_v4 TrmH family RNA methyltransferase 0.9819 32 223 GO:0003723
GO:0006396
GO:0008173
GO:0032259
AF-A0A7K0WCC6-F1-model_v4 rRNA methyltransferase 0.9805 40 224 GO:0003723
GO:0006396
GO:0008173
GO:0032259
AF-A0A0K8QB88-F1-model_v4 tRNA (Guanosine(18)-2'-O)-methyltransferase 0.9802 47 223 GO:0003723
GO:0006396
GO:0008173
GO:0032259
AF-A0A439DP42-F1-model_v4 RNA methyltransferase 0.9761 33 226 GO:0003723
GO:0006396
GO:0008173
GO:0032259

Feature Viewer

pLDDT pTM Quality
85.74 0.8 High
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Predicted Structure (AlphaFold2)

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