F384136

General Info

Members Datasets Scaffolds Average Seq Length
281 216 562 233

Family's Representative Sequence

Representative Sequence 3300005455|Ga0070663_100387120|Ga0070663_1003871201
Length 262
Sequence MPRLDKLDVRGRDLSKGSATDGSLGDVNAPSDAKPHVLVVEDDRAVRESLRRSLEFNGYVVSLAEDGAAALAGISGTNPDAIVMDVMMPRLDGIETTRALRSVGNQVPILVLTARDAVGDRVEGLDAGADDYLTKPFALDELLARLRALLRRAAPGHEAEADERLEFADLSMDLASREVRRGDRPMTLTRTEFSLLELFMRRPRRVLERSFILEEVWGFDFPTTANSLEVYVGYLRRKTEAEGEPRLLHTVRGVGYVLRETP

Samples

Sample ID Description Type Environment
1 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
2 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
3 3300001989 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5 Metagenome Rhizosphere
4 3300002075 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4 Metagenome Rhizosphere
5 3300005262 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMF (version 2) (version 3) Metagenome Endosphere
6 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
7 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
8 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
9 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
10 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
11 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
12 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
13 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
14 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
15 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
16 3300005438 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG Metagenome Rhizosphere
17 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
18 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
21 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
22 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
23 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
24 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
25 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
26 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
27 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
28 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
29 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
30 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
31 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
32 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
33 3300005834 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2 Metagenome Rhizosphere
34 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
37 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
38 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
39 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
40 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
41 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
45 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
46 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
49 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
50 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
51 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
52 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
53 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
54 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
55 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
56 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
57 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
58 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
59 3300014497 Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG Metagenome Rhizosphere
60 3300014745 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG Metagenome Rhizosphere
61 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
62 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
63 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
64 3300020610 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
65 3300025294 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Col_mLB (SPAdes) (version 2) Metagenome Endosphere
66 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
67 3300025315 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025937 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
99 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
100 3300030522 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 14_EM Metagenome Unclassified
101 3300030733 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 2 Metagenome Rhizosphere
102 3300030734 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 5 Metagenome Rhizosphere
103 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
104 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
105 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
106 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
107 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
108 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
109 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
110 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
111 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
112 3300035090 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_2 Metagenome Rhizosphere
113 3300041404 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0216DE14Z070717_5272 Metagenome Rhizosphere
114 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
115 3300041413 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - SB0710WE14Z080117_6839 Metagenome Rhizosphere
116 3300041491 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_1 MetaG Metagenome Unclassified
117 3300042004 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612WE14Z082817_5619 Metagenome Rhizosphere
118 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
119 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
120 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
121 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
122 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
123 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
124 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
125 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
126 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
127 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
128 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
129 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
130 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
131 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
132 3300046506 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 rhizosphere Metagenome Rhizosphere
133 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
134 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
135 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
136 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
137 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
138 3300047320 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co2_68_28 rhizosphere Metagenome Rhizosphere
139 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
140 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
141 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
142 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
143 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
144 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
145 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
146 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
147 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
148 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
149 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
150 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
151 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
152 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
153 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
154 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
155 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
156 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
157 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
158 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
159 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
160 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
161 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
162 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
163 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
165 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
166 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
167 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
168 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
170 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
171 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
172 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
173 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
174 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
175 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
176 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
177 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
178 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
179 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
180 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
181 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
182 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
183 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
184 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
185 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
186 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
187 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
188 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
189 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
190 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
191 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
192 2523231044 Gordonia rhizosphera NBRC 16068 Isolate Rhizosphere
193 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
194 2643221561 Nocardioides sp. Root151 Isolate Unclassified
195 2643221681 Aeromicrobium sp. Root472D3 Isolate Unclassified
196 2643221687 Mycobacterium sp. Root135 Isolate Unclassified
197 2643221696 Nocardioides sp. Root140 Isolate Unclassified
198 2643221697 Aeromicrobium sp. Root495 Isolate Unclassified
199 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
200 2751185725 Microbispora sp. NRRL B-24597 Isolate Unclassified
201 2751185792 Kitasatospora arboriphila NRRL B-24581 Isolate Unclassified
202 2773857762 Nocardioides sp. SAI-095 Isolate Unclassified
203 2808606439 Nocardioides sp. SLBN-172 Isolate Unclassified
204 2811994878 Nocardioides sp. SLBN-169 Isolate Unclassified
205 2816332119 Kribbella amoyensis DSM 24683 Isolate Rhizosphere
206 2842888712 Tsukamurella sp. R-71941 Isolate Unclassified
207 2891968417 Nocardioides luteus SAI-037 Isolate Unclassified
208 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
209 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
210 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
211 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
212 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
213 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
214 2922554459 Rhodococcus sp. 66b Isolate Unclassified
215 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
216 2984592036 Aeromicrobium sp. SORGH_AS981 Isolate Aerial Root

Type Distribution

Type Percentage (%)
Metagenomes 90.04
Metatranscriptomes 1.07
Isolates 8.9

Biome Distribution

Category Percentage (%)
Aerial Root 0.36
Bulb 0
Endosphere 4.63
Nodule 0
Rhizoplane 7.83
Rhizosphere 77.58
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070663_100387120 3300005455 Bacteria 1140
2 JGI24740J21852_10015379 3300001979 Bacteria 2796
3 JGI24739J22299_10096118 3300001989 Bacteria 897
4 JGI24738J21930_10006630 3300002075 Bacteria 2699
5 Ga0065165_1000903 3300005262 Bacteria 38298
6 Ga0070658_10029071 3300005327 Bacteria 4439
7 Ga0070683_100005315 3300005329 Bacteria 10733
8 Ga0070683_100208565 3300005329 Bacteria 1856
9 Ga0070682_100021502 3300005337 Bacteria 3808
10 Ga0070682_100057935 3300005337 Bacteria 2442
11 Ga0070692_10000288 3300005345 Bacteria 14218
12 Ga0070668_100081249 3300005347 Bacteria 2541
13 Ga0070675_100149883 3300005354 Bacteria 1999
14 Ga0070674_100004944 3300005356 Bacteria 7638
15 Ga0070674_100679818 3300005356 Bacteria 878
16 Ga0070673_100092244 3300005364 Bacteria 2477
17 Ga0070659_100012859 3300005366 Bacteria 6219
18 Ga0070659_100013130 3300005366 Bacteria 6159
19 Ga0070659_100094168 3300005366 Bacteria 2405
20 Ga0070667_100452997 3300005367 Bacteria 1173
21 Ga0070667_100566858 3300005367 Bacteria 1044
22 Ga0070701_10028780 3300005438 Bacteria 2733
23 Ga0070701_10101371 3300005438 Bacteria 1595
24 Ga0070700_100001534 3300005441 Bacteria 11512
25 Ga0070694_100097004 3300005444 Bacteria 2079
26 Ga0068867_100003142 3300005459 Bacteria 11644
27 Ga0070684_100048665 3300005535 Bacteria 3678
28 Ga0070684_100200424 3300005535 Bacteria 1818
29 Ga0070684_100252580 3300005535 Bacteria 1612
30 Ga0070684_100281048 3300005535 Bacteria 1525
31 Ga0070684_100472620 3300005535 Bacteria 1160
32 Ga0068853_100194952 3300005539 Bacteria 1842
33 Ga0070686_100077251 3300005544 Bacteria 2195
34 Ga0070665_100728012 3300005548 Bacteria 1005
35 Ga0068855_100441172 3300005563 Bacteria 1422
36 Ga0070664_100147792 3300005564 Bacteria 2073
37 Ga0070664_100532576 3300005564 Bacteria 1085
38 Ga0068857_100561700 3300005577 Bacteria 1076
39 Ga0068857_100750261 3300005577 Bacteria 930
40 Ga0068854_100042990 3300005578 Bacteria 3201
41 Ga0068856_100982765 3300005614 Bacteria 863
42 Ga0070702_100000765 3300005615 Bacteria 12194
43 Ga0068852_100061940 3300005616 Bacteria 3252
44 Ga0068864_100132509 3300005618 Bacteria 2241
45 Ga0068866_10003732 3300005718 Bacteria 6246
46 Ga0068851_10102739 3300005834 Bacteria 1518
47 Ga0068870_10001913 3300005840 Bacteria 8586
48 Ga0068860_100848510 3300005843 Bacteria 928
49 Ga0081455_10267753 3300005937 Bacteria 1241
50 Ga0081538_10000548 3300005981 Bacteria 41457
51 Ga0081539_10046388 3300005985 Bacteria 2490
52 Ga0075365_10045651 3300006038 Bacteria 2875
53 Ga0075365_10151696 3300006038 Bacteria 1612
54 Ga0075364_10000347 3300006051 Bacteria 23005
55 Ga0075364_10133381 3300006051 Bacteria 1668
56 Ga0075362_10044169 3300006177 Bacteria 1975
57 Ga0075428_100141009 3300006844 Bacteria 2621
58 Ga0075430_100058002 3300006846 Bacteria 3255
59 Ga0068865_100022091 3300006881 Bacteria 4145
60 Ga0111539_10074919 3300009094 Bacteria 3988
61 Ga0105245_10017921 3300009098 Bacteria 6184
62 Ga0114129_10005189 3300009147 Bacteria 18345
63 Ga0105243_10002182 3300009148 Bacteria 16514
64 Ga0105243_10326125 3300009148 Bacteria 1401
65 Ga0105242_10142426 3300009176 Bacteria 2082
66 Ga0105248_10017162 3300009177 Bacteria 7974
67 Ga0105238_10145062 3300009551 Bacteria 2350
68 Ga0105238_10245244 3300009551 Bacteria 1769
69 Ga0105249_10025405 3300009553 Bacteria 5332
70 Ga0105249_10307722 3300009553 Bacteria 1592
71 Ga0105249_10711028 3300009553 Bacteria 1065
72 Ga0105239_10004959 3300010375 Bacteria 15716
73 Ga0105246_10618043 3300011119 Bacteria 939
74 Ga0157369_10446362 3300013105 Bacteria 1340
75 Ga0157372_10155311 3300013307 Bacteria 2643
76 Ga0157372_10341800 3300013307 Bacteria 1743
77 Ga0157375_11076573 3300013308 Bacteria 940
78 Ga0157380_10935524 3300014326 Bacteria 896
79 Ga0182008_10030826 3300014497 Bacteria 2701
80 Ga0182008_10257144 3300014497 Bacteria 902
81 Ga0157377_10012528 3300014745 Bacteria 4268
82 Ga0157376_10744667 3300014969 Bacteria 989
83 Ga0163161_10089472 3300017792 Bacteria 2277
84 Ga0206353_11154083 3300020082 Bacteria 2120
85 Ga0154015_1690079 3300020610 Bacteria 1426
86 Ga0209025_1007376 3300025294 Bacteria 8221
87 Ga0207426_1074449 3300025302 Bacteria 937
88 Ga0207697_10198785 3300025315 Bacteria 881
89 Ga0207642_10122634 3300025899 Bacteria 1343
90 Ga0207688_10007724 3300025901 Bacteria 5860
91 Ga0207647_10002128 3300025904 Bacteria 15136
92 Ga0207647_10148118 3300025904 Bacteria 1373
93 Ga0207643_10000686 3300025908 Bacteria 21134
94 Ga0207657_10218953 3300025919 Bacteria 1526
95 Ga0207687_10006469 3300025927 Bacteria 7737
96 Ga0207690_10024021 3300025932 Bacteria 3813
97 Ga0207690_10103391 3300025932 Bacteria 2039
98 Ga0207690_10124155 3300025932 Bacteria 1880
99 Ga0207686_10091287 3300025934 Bacteria 2011
100 Ga0207709_10013230 3300025935 Bacteria 4551
101 Ga0207669_10063704 3300025937 Bacteria 2277
102 Ga0207704_10279789 3300025938 Bacteria 1268
103 Ga0207691_10002759 3300025940 Bacteria 17117
104 Ga0207711_10119190 3300025941 Bacteria 2354
105 Ga0207661_10116352 3300025944 Bacteria 2270
106 Ga0207679_10012179 3300025945 Bacteria 5601
107 Ga0207667_10128326 3300025949 Bacteria 2612
108 Ga0207712_10027135 3300025961 Bacteria 3822
109 Ga0207712_10516424 3300025961 Bacteria 1023
110 Ga0207640_10477090 3300025981 Bacteria 1034
111 Ga0207658_10072571 3300025986 Bacteria 2610
112 Ga0207658_10381358 3300025986 Bacteria 1235
113 Ga0207639_10422856 3300026041 Bacteria 1205
114 Ga0207678_10037017 3300026067 Bacteria 4247
115 Ga0207678_10300462 3300026067 Bacteria 1379
116 Ga0207708_10000171 3300026075 Bacteria 51434
117 Ga0207708_10497977 3300026075 Bacteria 1021
118 Ga0207641_10836863 3300026088 Bacteria 912
119 Ga0207648_10000926 3300026089 Bacteria 33052
120 Ga0207676_10728354 3300026095 Bacteria 963
121 Ga0207674_10062467 3300026116 Bacteria 3762
122 Ga0207675_100001852 3300026118 Bacteria 21231
123 Ga0207683_10210470 3300026121 Bacteria 1770
124 Ga0207698_10012275 3300026142 Bacteria 5599
125 Ga0268265_10726423 3300028380 Bacteria 962
126 Ga0268264_10730934 3300028381 Bacteria 985
127 Ga0307515_10179575 3300028794 Bacteria 2073
128 Ga0307512_10123293 3300030522 Bacteria 1655
129 Ga0314311_1089162 3300030733 Bacteria 1262
130 Ga0316179_1051860 3300030734 Bacteria 815
131 Ga0307513_10347210 3300031456 Bacteria 1233
132 Ga0307410_10082046 3300031852 Bacteria 2267
133 Ga0307407_10042788 3300031903 Bacteria 2542
134 Ga0307407_10081075 3300031903 Bacteria 1963
135 Ga0307412_10050337 3300031911 Bacteria 2749
136 Ga0307409_100307155 3300031995 Bacteria 1478
137 Ga0307416_100389207 3300032002 Bacteria 1427
138 Ga0307414_10138095 3300032004 Bacteria 1904
139 Ga0307411_10050309 3300032005 Bacteria 2713
140 Ga0307507_10243734 3300033179 Bacteria 1172
141 Ga0373949_0066016 3300035090 Bacteria 940
142 Ga0439436_0007021 3300041404 Bacteria 3466
143 Ga0439461_0067160 3300041410 Bacteria 825
144 Ga0439465_0000422 3300041413 Bacteria 12352
145 Ga0451833_0579776 3300041491 Bacteria 14024
146 Ga0439445_0002702 3300042004 Bacteria 3949
147 Ga0439449_0000087 3300042007 Bacteria 30122
148 Ga0439464_0039046 3300042439 Bacteria 1349
149 Ga0451577_0023992 3300042876 Bacteria 5554
150 Ga0466972_0009335 3300044658 Bacteria 4931
151 Ga0466965_0006504 3300044683 Bacteria 5311
152 Ga0466965_0103093 3300044683 Bacteria 1460
153 Ga0466965_0242625 3300044683 Bacteria 965
154 Ga0466966_0040852 3300044684 Bacteria 2983
155 Ga0466966_0098632 3300044684 Bacteria 1809
156 Ga0466961_0050324 3300044693 Bacteria 2661
157 Ga0466961_0337729 3300044693 Bacteria 918
158 Ga0466963_0143509 3300044694 Bacteria 1655
159 Ga0466970_0061909 3300044765 Bacteria 2005
160 Ga0466970_0088360 3300044765 Bacteria 1681
161 Ga0466957_0001740 3300044842 Bacteria 11460
162 Ga0466957_0133876 3300044842 Bacteria 1591
163 Ga0466960_0003678 3300044901 Bacteria 5915
164 Ga0466960_0011325 3300044901 Bacteria 3728
165 Ga0466960_0038647 3300044901 Bacteria 2246
166 Ga0466960_0057692 3300044901 Bacteria 1894
167 Ga0466960_0122321 3300044901 Bacteria 1364
168 Ga0466958_0235872 3300045836 Bacteria 1168
169 Ga0466967_0010656 3300045976 Bacteria 6911
170 Ga0466967_0046797 3300045976 Bacteria 3768
171 Ga0466967_0263465 3300045976 Bacteria 1649
172 Ga0466967_0268831 3300045976 Bacteria 1633
173 Ga0466967_0397918 3300045976 Bacteria 1340
174 Ga0495664_0101306 3300046477 Bacteria 1735
175 Ga0495583_0025155 3300046506 Bacteria 2979
176 Ga0495608_0375781 3300046511 Bacteria 872
177 Ga0495640_0453999 3300046533 Bacteria 783
178 Ga0495586_0036443 3300046535 Bacteria 2640
179 Ga0495668_0001186 3300046616 Bacteria 26476
180 Ga0495658_0147922 3300046683 Bacteria 1441
181 Ga0495672_0107256 3300047320 Bacteria 1505
182 Ga0496100_0059647 3300048903 Bacteria 2508
183 Ga0496101_0010510 3300048904 Bacteria 6113
184 Ga0496102_0169006 3300048905 Bacteria 2058
185 Ga0496102_0260720 3300048905 Bacteria 1634
186 Ga0496102_0352822 3300048905 Bacteria 1385
187 Ga0496103_0040260 3300048906 Bacteria 2872
188 Ga0496104_0191310 3300048907 Bacteria 1958
189 Ga0496105_0080887 3300048908 Bacteria 2684
190 Ga0496106_0010872 3300048909 Bacteria 6726
191 Ga0496106_0088063 3300048909 Bacteria 2393
192 Ga0496107_0016224 3300048910 Bacteria 5228
193 Ga0496108_0093332 3300048911 Bacteria 2560
194 Ga0496108_0536068 3300048911 Bacteria 1022
195 Ga0496109_0120812 3300048912 Bacteria 2441
196 Ga0496109_0140249 3300048912 Bacteria 2260
197 Ga0496109_0812523 3300048912 Bacteria 873
198 Ga0496110_0066211 3300048913 Bacteria 3195
199 Ga0496110_0396614 3300048913 Bacteria 1258
200 Ga0496110_0789004 3300048913 Bacteria 854
201 Ga0496112_0635201 3300048915 Bacteria 998
202 Ga0496114_0189585 3300048917 Bacteria 1799
203 Ga0496114_0247185 3300048917 Bacteria 1569
204 Ga0496116_0009123 3300048919 Bacteria 8500
205 Ga0496122_0215650 3300048925 Bacteria 1107
206 Ga0496123_0023633 3300048926 Bacteria 4699
207 Ga0496124_0096231 3300048927 Bacteria 2405
208 Ga0496125_0043786 3300048928 Bacteria 3793
209 Ga0501318_007952 3300049534 Bacteria 1122
210 Ga0501031_0160431 3300049568 Bacteria 1470
211 Ga0501031_0284027 3300049568 Bacteria 1073
212 Ga0501031_0299446 3300049568 Bacteria 1042
213 Ga0501033_0125509 3300049570 Bacteria 1861
214 Ga0501034_0033873 3300049571 Bacteria 5179
215 Ga0501034_0633875 3300049571 Bacteria 972
216 Ga0501036_0015326 3300049572 Bacteria 6402
217 Ga0501037_0032811 3300049573 Bacteria 3836
218 Ga0501038_0019872 3300049574 Bacteria 6045
219 Ga0501039_0168319 3300049575 Bacteria 1723
220 Ga0501039_0302691 3300049575 Bacteria 1257
221 Ga0501041_0110898 3300049577 Bacteria 1702
222 Ga0501042_0011333 3300049578 Bacteria 6013
223 Ga0501042_0089626 3300049578 Bacteria 2207
224 Ga0501043_0346598 3300049579 Bacteria 1129
225 Ga0501047_0137051 3300049581 Bacteria 2327
226 Ga0501048_0126502 3300049582 Bacteria 1807
227 Ga0501048_0174172 3300049582 Bacteria 1525
228 Ga0501067_0031647 3300049583 Bacteria 2935
229 Ga0501069_0041341 3300049585 Bacteria 2548
230 Ga0501069_0059067 3300049585 Bacteria 2140
231 Ga0501069_0147490 3300049585 Bacteria 1351
232 Ga0501070_0353406 3300049586 Bacteria 1192
233 Ga0501070_0949693 3300049586 Bacteria 669
234 Ga0501071_0173544 3300049587 Bacteria 1614
235 Ga0501071_0333319 3300049587 Bacteria 1153
236 Ga0501072_0201852 3300049588 Bacteria 1585
237 Ga0501072_0202124 3300049588 Bacteria 1584
238 Ga0501073_0047537 3300049589 Bacteria 3016
239 Ga0501081_0649158 3300049743 Bacteria 791
240 Ga0501035_0035003 3300049822 Bacteria 4562
241 Ga0501035_0345185 3300049822 Bacteria 1247
242 Ga0501044_0009792 3300049823 Bacteria 10421
243 nmdc:mga03683_22232_c1 3300050489 Bacteria 2457
244 nmdc:mga0yw44_42146_c1 3300050492 Bacteria 2721
245 nmdc:mga07m45_268325_c1 3300050496 Bacteria 993
246 nmdc:mga05p37_22406_c1 3300050507 Bacteria 7662
247 nmdc:mga09592_118684_c1 3300050508 Bacteria 2271
248 nmdc:mga06r32_10339_c1 3300050510 Bacteria 8415
249 nmdc:mga08y16_21907_c1 3300050511 Bacteria 6745
250 nmdc:mga0n895_801315_c1 3300050512 Bacteria 932
251 Ga0495655_0057771 3300053083 Bacteria 1048
252 Ga0495655_0085982 3300053083 Bacteria 908
253 Ga0500644_0000204 3300053088 Bacteria 35880
254 Ga0500616_0002602 3300053153 Bacteria 14772
255 Ga0501082_0164710 3300060353 Bacteria 1927
256 Ga0466962_0002050 3300061719 Bacteria 9534
257 2523385119 2523231044 Bacteria 6434991
258 2566992143 2565956761 Bacteria 6601618
259 2643826828 2643221561 Bacteria 4984412
260 2644455016 2643221681 Bacteria 3707866
261 2644490589 2643221687 Bacteria 6500351
262 2644534177 2643221696 Bacteria 5431823
263 2644539500 2643221697 Bacteria 3575694
264 2739204193 2738543005 Bacteria 5278128
265 2753037768 2751185725 Bacteria 5740550
266 2753325636 2751185792 Bacteria 5739090
267 2774395149 2773857762 Bacteria 5971770
268 2809194016 2808606439 Bacteria 5952208
269 2812348753 2811994878 Bacteria 5992952
270 2816422057 2816332119 Bacteria 8120218
271 2842891173 2842888712 Bacteria 4279094
272 2891973483 2891968417 Bacteria 5821697
273 2904538035 2904535858 Bacteria 6308016
274 2904766552 2904765812 Bacteria 5369154
275 2904772720 2904770941 Bacteria 5580202
276 2908811510 2908811453 Bacteria 5478616
277 2919421013 2919420072 Bacteria 5390363
278 2919433229 2919432681 Bacteria 5390474
279 2922557218 2922554459 Bacteria 6683962
280 2928145080 2928142448 Bacteria 5288925
281 2984593199 2984592036 Bacteria 3670284
282 Ga0070663_100387120
283 JGI24740J21852_10015379
284 JGI24739J22299_10096118
285 JGI24738J21930_10006630
286 Ga0065165_1000903
287 Ga0070658_10029071
288 Ga0070683_100005315
289 Ga0070683_100208565
290 Ga0070682_100021502
291 Ga0070682_100057935
292 Ga0070692_10000288
293 Ga0070668_100081249
294 Ga0070675_100149883
295 Ga0070674_100004944
296 Ga0070674_100679818
297 Ga0070673_100092244
298 Ga0070659_100012859
299 Ga0070659_100013130
300 Ga0070659_100094168
301 Ga0070667_100452997
302 Ga0070667_100566858
303 Ga0070701_10028780
304 Ga0070701_10101371
305 Ga0070700_100001534
306 Ga0070694_100097004
307 Ga0068867_100003142
308 Ga0070684_100048665
309 Ga0070684_100200424
310 Ga0070684_100252580
311 Ga0070684_100281048
312 Ga0070684_100472620
313 Ga0068853_100194952
314 Ga0070686_100077251
315 Ga0070665_100728012
316 Ga0068855_100441172
317 Ga0070664_100147792
318 Ga0070664_100532576
319 Ga0068857_100561700
320 Ga0068857_100750261
321 Ga0068854_100042990
322 Ga0068856_100982765
323 Ga0070702_100000765
324 Ga0068852_100061940
325 Ga0068864_100132509
326 Ga0068866_10003732
327 Ga0068851_10102739
328 Ga0068870_10001913
329 Ga0068860_100848510
330 Ga0081455_10267753
331 Ga0081538_10000548
332 Ga0081539_10046388
333 Ga0075365_10045651
334 Ga0075365_10151696
335 Ga0075364_10000347
336 Ga0075364_10133381
337 Ga0075362_10044169
338 Ga0075428_100141009
339 Ga0075430_100058002
340 Ga0068865_100022091
341 Ga0111539_10074919
342 Ga0105245_10017921
343 Ga0114129_10005189
344 Ga0105243_10002182
345 Ga0105243_10326125
346 Ga0105242_10142426
347 Ga0105248_10017162
348 Ga0105238_10145062
349 Ga0105238_10245244
350 Ga0105249_10025405
351 Ga0105249_10307722
352 Ga0105249_10711028
353 Ga0105239_10004959
354 Ga0105246_10618043
355 Ga0157369_10446362
356 Ga0157372_10155311
357 Ga0157372_10341800
358 Ga0157375_11076573
359 Ga0157380_10935524
360 Ga0182008_10030826
361 Ga0182008_10257144
362 Ga0157377_10012528
363 Ga0157376_10744667
364 Ga0163161_10089472
365 Ga0206353_11154083
366 Ga0154015_1690079
367 Ga0209025_1007376
368 Ga0207426_1074449
369 Ga0207697_10198785
370 Ga0207642_10122634
371 Ga0207688_10007724
372 Ga0207647_10002128
373 Ga0207647_10148118
374 Ga0207643_10000686
375 Ga0207657_10218953
376 Ga0207687_10006469
377 Ga0207690_10024021
378 Ga0207690_10103391
379 Ga0207690_10124155
380 Ga0207686_10091287
381 Ga0207709_10013230
382 Ga0207669_10063704
383 Ga0207704_10279789
384 Ga0207691_10002759
385 Ga0207711_10119190
386 Ga0207661_10116352
387 Ga0207679_10012179
388 Ga0207667_10128326
389 Ga0207712_10027135
390 Ga0207712_10516424
391 Ga0207640_10477090
392 Ga0207658_10072571
393 Ga0207658_10381358
394 Ga0207639_10422856
395 Ga0207678_10037017
396 Ga0207678_10300462
397 Ga0207708_10000171
398 Ga0207708_10497977
399 Ga0207641_10836863
400 Ga0207648_10000926
401 Ga0207676_10728354
402 Ga0207674_10062467
403 Ga0207675_100001852
404 Ga0207683_10210470
405 Ga0207698_10012275
406 Ga0268265_10726423
407 Ga0268264_10730934
408 Ga0307515_10179575
409 Ga0307512_10123293
410 Ga0314311_1089162
411 Ga0316179_1051860
412 Ga0307513_10347210
413 Ga0307410_10082046
414 Ga0307407_10042788
415 Ga0307407_10081075
416 Ga0307412_10050337
417 Ga0307409_100307155
418 Ga0307416_100389207
419 Ga0307414_10138095
420 Ga0307411_10050309
421 Ga0307507_10243734
422 Ga0373949_0066016
423 Ga0439436_0007021
424 Ga0439461_0067160
425 Ga0439465_0000422
426 Ga0451833_0579776
427 Ga0439445_0002702
428 Ga0439449_0000087
429 Ga0439464_0039046
430 Ga0451577_0023992
431 Ga0466972_0009335
432 Ga0466965_0006504
433 Ga0466965_0103093
434 Ga0466965_0242625
435 Ga0466966_0040852
436 Ga0466966_0098632
437 Ga0466961_0050324
438 Ga0466961_0337729
439 Ga0466963_0143509
440 Ga0466970_0061909
441 Ga0466970_0088360
442 Ga0466957_0001740
443 Ga0466957_0133876
444 Ga0466960_0003678
445 Ga0466960_0011325
446 Ga0466960_0038647
447 Ga0466960_0057692
448 Ga0466960_0122321
449 Ga0466958_0235872
450 Ga0466967_0010656
451 Ga0466967_0046797
452 Ga0466967_0263465
453 Ga0466967_0268831
454 Ga0466967_0397918
455 Ga0495664_0101306
456 Ga0495583_0025155
457 Ga0495608_0375781
458 Ga0495640_0453999
459 Ga0495586_0036443
460 Ga0495668_0001186
461 Ga0495658_0147922
462 Ga0495672_0107256
463 Ga0496100_0059647
464 Ga0496101_0010510
465 Ga0496102_0169006
466 Ga0496102_0260720
467 Ga0496102_0352822
468 Ga0496103_0040260
469 Ga0496104_0191310
470 Ga0496105_0080887
471 Ga0496106_0010872
472 Ga0496106_0088063
473 Ga0496107_0016224
474 Ga0496108_0093332
475 Ga0496108_0536068
476 Ga0496109_0120812
477 Ga0496109_0140249
478 Ga0496109_0812523
479 Ga0496110_0066211
480 Ga0496110_0396614
481 Ga0496110_0789004
482 Ga0496112_0635201
483 Ga0496114_0189585
484 Ga0496114_0247185
485 Ga0496116_0009123
486 Ga0496122_0215650
487 Ga0496123_0023633
488 Ga0496124_0096231
489 Ga0496125_0043786
490 Ga0501318_007952
491 Ga0501031_0160431
492 Ga0501031_0284027
493 Ga0501031_0299446
494 Ga0501033_0125509
495 Ga0501034_0033873
496 Ga0501034_0633875
497 Ga0501036_0015326
498 Ga0501037_0032811
499 Ga0501038_0019872
500 Ga0501039_0168319
501 Ga0501039_0302691
502 Ga0501041_0110898
503 Ga0501042_0011333
504 Ga0501042_0089626
505 Ga0501043_0346598
506 Ga0501047_0137051
507 Ga0501048_0126502
508 Ga0501048_0174172
509 Ga0501067_0031647
510 Ga0501069_0041341
511 Ga0501069_0059067
512 Ga0501069_0147490
513 Ga0501070_0353406
514 Ga0501070_0949693
515 Ga0501071_0173544
516 Ga0501071_0333319
517 Ga0501072_0201852
518 Ga0501072_0202124
519 Ga0501073_0047537
520 Ga0501081_0649158
521 Ga0501035_0035003
522 Ga0501035_0345185
523 Ga0501044_0009792
524 nmdc:mga03683_22232_c1
525 nmdc:mga0yw44_42146_c1
526 nmdc:mga07m45_268325_c1
527 nmdc:mga05p37_22406_c1
528 nmdc:mga09592_118684_c1
529 nmdc:mga06r32_10339_c1
530 nmdc:mga08y16_21907_c1
531 nmdc:mga0n895_801315_c1
532 Ga0495655_0057771
533 Ga0495655_0085982
534 Ga0500644_0000204
535 Ga0500616_0002602
536 Ga0501082_0164710
537 Ga0466962_0002050
538 2523385119
539 2566992143
540 2643826828
541 2644455016
542 2644490589
543 2644534177
544 2644539500
545 2739204193
546 2753037768
547 2753325636
548 2774395149
549 2809194016
550 2812348753
551 2816422057
552 2842891173
553 2891973483
554 2904538035
555 2904766552
556 2904772720
557 2908811510
558 2919421013
559 2919433229
560 2922557218
561 2928145080
562 2984593199

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00072

Response_reg

Response regulator receiver domain

37

147

0.99

PF00486

Trans_reg_C

Transcriptional regulatory protein, C terminal

183

258

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
2zwm-assembly1.cif.gz_B crystal structure of yycf receiver domain from bacillus subtilis 0.9773 2 118
2a9r-assembly1.cif.gz_A-2 rr02-rec phosphate in the active site 0.9668 1 118
1nxt-assembly1.cif.gz_A-2 micarec ph 4.0 0.9665 1 118
4uhj-assembly2.cif.gz_C crystal structure of the receiver domain of cpxr from e. coli (orthorhombic form) 0.9642 1 119
8fk2-assembly1.cif.gz_B the n-terminal vicr from streptococcus mutans 0.9638 2 121
ID Description Score Start End Superfamily
af_P9WGM1_5_87_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9984 2 77 3.40.50.2300
af_Q2FXN6_3_86_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9878 1 83 3.40.50.2300
af_O07776_22_102_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.98 1 77 3.40.50.2300
af_P23836_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9796 1 77 3.40.50.2300
af_P30843_1_80_3.40.50.2300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;Response regulator 0.9767 1 77 3.40.50.2300
ID Description Score Start End GO Terms
AF-A0A3D2VRM7-F1-model_v4 Two-component system response regulator 0.9894 2 68 GO:0000160
AF-A0A7R8ZVL0-F1-model_v4 Response regulatory domain-containing protein 0.9858 1 68 GO:0000160
AF-A0A2V9EZN5-F1-model_v4 Diguanylate cyclase 0.9767 2 117 GO:0000160
AF-A0A7X7DME9-F1-model_v4 histidine kinase (EC 2.7.13.3) 0.9737 1 117 GO:0000155
AF-A0A3E1D0H6-F1-model_v4 Diguanylate cyclase (GGDEF) domain-containing protein 0.9728 2 117 GO:0000160
GO:0005524
GO:0016301

Map