F383159

General Info

Members Datasets Scaffolds Average Seq Length
279 168 254 151

Family's Representative Sequence

Representative Sequence 3300031995|Ga0307409_101032817|Ga0307409_1010328172
Length 180
Sequence MLCLTPDRGKRWWLGRQVVPGVTYSAAVTDTAYRTVVVGTDGSESSLRAVARAGAIAGACGATLVVACAYLPTDADERELSRAQDLLGDEAYQVVGSHPAEETVRSAGERAAKAGATDIRTVAVMGSPVEALLDVVRRERADLLVVGNKGLNGIKGRLLGSVPADATRRSGVDVLVVHTT

Samples

Sample ID Description Type Environment
1 2547132424 Nocardia nova SH22a Isolate Unclassified
2 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
3 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
4 2643221692 Nocardia sp. Root136 Isolate Unclassified
5 2675903060 Nonomuraea wenchangensis CGMCC 4.5598 Isolate Rhizosphere
6 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
7 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
8 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
9 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
10 2744054611 Aldersonia kunmingensis DSM 45001 Isolate Rhizosphere
11 2866552031 Saccharopolyspora rhizosphaerae H219 Isolate Unclassified
12 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
13 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
14 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
15 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
16 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
17 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
18 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
19 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
20 2922554459 Rhodococcus sp. 66b Isolate Unclassified
21 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
22 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
23 2956939328 Lolliginicoccus suaedae LNNU 331112 Isolate Rhizosphere
24 3001119090 Lolliginicoccus lacisalsi G463 Isolate Rhizosphere
25 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
26 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
27 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
28 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
29 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
30 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
31 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
32 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
33 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
34 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
35 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
36 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
37 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
38 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
39 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
40 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
41 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
42 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
43 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
44 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
45 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
46 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
47 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
48 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
49 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
50 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
51 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
52 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
53 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
54 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
55 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
56 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
57 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
58 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
59 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
60 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
61 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
62 3300020081 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
63 3300020082 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
64 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025919 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025929 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
78 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
79 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
80 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
81 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
82 3300028666 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-19 metaG Metagenome Rhizosphere
83 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
84 3300029957 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-19 metaG Metagenome Rhizosphere
85 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
86 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
87 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
88 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
89 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
90 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
91 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
92 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
93 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
94 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
95 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
96 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
97 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
98 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
99 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
100 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
101 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
102 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
103 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
104 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
105 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
106 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
107 3300041453 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_6 MetaG Metagenome Rhizoplane
108 3300041512 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR18_11 MetaG Metagenome Unclassified
109 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
110 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
111 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
112 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
113 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
114 3300044706 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA3R Metagenome Rhizosphere
115 3300044719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC1R Metagenome Rhizosphere
116 3300044765 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA2R Metagenome Rhizosphere
117 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
118 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
119 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
120 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
121 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
122 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
123 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
124 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
125 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
126 3300046517 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-470-CL2_38_23 rhizosphere Metagenome Rhizosphere
127 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
128 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
129 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
130 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
131 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
132 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
133 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
134 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
135 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
136 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
137 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
138 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
139 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
140 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
141 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
142 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
143 3300049539 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H12_B_3_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
144 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
145 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
146 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
147 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
148 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
149 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
150 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
151 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
152 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
153 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
154 3300049685 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G12_B_3_control Metagenome Rhizosphere
155 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
156 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
157 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
158 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
159 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
160 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
161 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
162 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
163 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
164 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
165 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
166 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
167 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
168 8056207758 Saccharopolyspora indica KCTC 29208 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 88.89
Metatranscriptomes 2.15
Isolates 8.96

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 9.68
Nodule 0
Rhizoplane 3.23
Rhizosphere 81
Stem 0
Stem Tuber 0
Unclassified 6.09

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI25405J52794_10061765 3300003911 Bacteria 811
2 Ga0070658_10321368 3300005327 Bacteria 1322
3 Ga0070683_100120222 3300005329 Bacteria 2481
4 Ga0070683_100322365 3300005329 Bacteria 1471
5 Ga0070683_101455126 3300005329 Bacteria 658
6 Ga0070680_100222940 3300005336 Bacteria 1592
7 Ga0070692_10784325 3300005345 Unclassified 649
8 Ga0070714_100007619 3300005435 Bacteria 8429
9 Ga0070713_100002826 3300005436 Bacteria 11364
10 Ga0070713_100014500 3300005436 Bacteria 5857
11 Ga0070713_100034905 3300005436 Bacteria 4046
12 Ga0070710_10000274 3300005437 Bacteria 24305
13 Ga0070710_10017247 3300005437 Bacteria 3691
14 Ga0070711_100003744 3300005439 Bacteria 8916
15 Ga0070708_100002672 3300005445 Bacteria 13816
16 Ga0070708_100125665 3300005445 Bacteria 2370
17 Ga0070706_100167589 3300005467 Bacteria 2051
18 Ga0070679_100079413 3300005530 Bacteria 3270
19 Ga0070684_100872687 3300005535 Unclassified 842
20 Ga0070697_100110952 3300005536 Bacteria 2286
21 Ga0068855_100027925 3300005563 Bacteria 6750
22 Ga0068856_100018060 3300005614 Bacteria 6840
23 Ga0068852_100345692 3300005616 Bacteria 1451
24 Ga0068852_100761326 3300005616 Bacteria 981
25 Ga0068852_101368996 3300005616 Bacteria 730
26 Ga0081455_10000018 3300005937 Bacteria 173683
27 Ga0070717_10184046 3300006028 Bacteria 1822
28 Ga0070717_10462433 3300006028 Bacteria 1144
29 Ga0075365_10019766 3300006038 Bacteria 4164
30 Ga0075368_10244100 3300006042 Bacteria 766
31 Ga0075363_100010549 3300006048 Bacteria 4394
32 Ga0075363_100202930 3300006048 Unclassified 1133
33 Ga0075364_10097306 3300006051 Bacteria 1957
34 Ga0075364_10108104 3300006051 Bacteria 1855
35 Ga0075364_10223649 3300006051 Bacteria 1278
36 Ga0070715_10015893 3300006163 Bacteria 2816
37 Ga0070716_100000176 3300006173 Bacteria 25139
38 Ga0070716_100089706 3300006173 Bacteria 1858
39 Ga0070712_100194269 3300006175 Bacteria 1590
40 Ga0070712_100618265 3300006175 Bacteria 918
41 Ga0075362_10050731 3300006177 Bacteria 1856
42 Ga0075367_10064779 3300006178 Bacteria 2187
43 Ga0075370_10042472 3300006353 Bacteria 2569
44 Ga0075370_10081972 3300006353 Bacteria 1854
45 Ga0075370_10142555 3300006353 Bacteria 1401
46 Ga0075370_10392880 3300006353 Bacteria 832
47 Ga0075370_10409048 3300006353 Unclassified 814
48 Ga0105243_10010303 3300009148 Bacteria 7101
49 Ga0105241_11366806 3300009174 Bacteria 677
50 Ga0105237_10678270 3300009545 Bacteria 1037
51 Ga0105237_11304226 3300009545 Bacteria 732
52 Ga0105238_11470588 3300009551 Bacteria 709
53 Ga0105239_10237008 3300010375 Bacteria 2048
54 Ga0105239_10254415 3300010375 Bacteria 1973
55 Ga0157369_10189585 3300013105 Bacteria 2161
56 Ga0157369_10934498 3300013105 Bacteria 889
57 Ga0157372_10126319 3300013307 Bacteria 2941
58 Ga0157379_10007266 3300014968 Bacteria 9585
59 Ga0206354_11200228 3300020081 Bacteria 4030
60 Ga0206354_11487554 3300020081 Bacteria 966
61 Ga0206353_10345637 3300020082 Bacteria 2023
62 Ga0206353_11385930 3300020082 Bacteria 922
63 Ga0206353_11731352 3300020082 Bacteria 6163
64 Ga0207692_10059476 3300025898 Bacteria 1973
65 Ga0207692_10347671 3300025898 Bacteria 913
66 Ga0207699_10000456 3300025906 Bacteria 20867
67 Ga0207705_10388478 3300025909 Bacteria 1078
68 Ga0207684_10369654 3300025910 Bacteria 1234
69 Ga0207660_10469696 3300025917 Bacteria 1019
70 Ga0207657_10602239 3300025919 Bacteria 857
71 Ga0207700_10007175 3300025928 Bacteria 6792
72 Ga0207700_10048570 3300025928 Bacteria 3152
73 Ga0207700_10277695 3300025928 Bacteria 1440
74 Ga0207664_10024807 3300025929 Bacteria 4509
75 Ga0207664_10337713 3300025929 Bacteria 1332
76 Ga0207664_10733873 3300025929 Bacteria 888
77 Ga0207664_11090596 3300025929 Bacteria 714
78 Ga0207690_10468168 3300025932 Bacteria 1015
79 Ga0207709_10002228 3300025935 Bacteria 12357
80 Ga0207665_10000362 3300025939 Bacteria 31478
81 Ga0207665_11129625 3300025939 Bacteria 625
82 Ga0207661_10036515 3300025944 Bacteria 3837
83 Ga0207661_10148742 3300025944 Bacteria 2023
84 Ga0207661_10440604 3300025944 Bacteria 1186
85 Ga0207667_10012473 3300025949 Bacteria 9788
86 Ga0209813_10292462 3300027866 Bacteria 630
87 Ga0265326_10007266 3300028558 Bacteria 3406
88 Ga0265319_1000094 3300028563 Bacteria 68209
89 Ga0265318_10001244 3300028577 Bacteria 15462
90 Ga0265322_10031884 3300028654 Bacteria 1504
91 Ga0265336_10000019 3300028666 Bacteria 218636
92 Ga0265338_10000413 3300028800 Bacteria 76430
93 Ga0265324_10006791 3300029957 Bacteria 4723
94 Ga0265340_10000004 3300031247 Bacteria 218649
95 Ga0265339_10011829 3300031249 Bacteria 5354
96 Ga0265316_10011874 3300031344 Bacteria 7835
97 Ga0265316_10069543 3300031344 Bacteria 2717
98 Ga0307408_100246138 3300031548 Bacteria 1472
99 Ga0307408_100804765 3300031548 Bacteria 853
100 Ga0307408_101004200 3300031548 Bacteria 769
101 Ga0265314_10328334 3300031711 Bacteria 849
102 Ga0307405_10195597 3300031731 Bacteria 1464
103 Ga0307405_10447971 3300031731 Bacteria 1023
104 Ga0307405_11000907 3300031731 Bacteria 713
105 Ga0307413_10050516 3300031824 Bacteria 2499
106 Ga0307410_10026960 3300031852 Bacteria 3625
107 Ga0307410_10133088 3300031852 Bacteria 1829
108 Ga0307410_10275707 3300031852 Bacteria 1317
109 Ga0307410_10426635 3300031852 Bacteria 1077
110 Ga0307406_10038030 3300031901 Bacteria 2977
111 Ga0307406_10223577 3300031901 Bacteria 1401
112 Ga0307406_10267875 3300031901 Bacteria 1296
113 Ga0307406_10765881 3300031901 Unclassified 812
114 Ga0307407_10006751 3300031903 Bacteria 5135
115 Ga0307407_10043535 3300031903 Bacteria 2524
116 Ga0307407_10091803 3300031903 Bacteria 1863
117 Ga0307407_10397115 3300031903 Bacteria 988
118 Ga0307412_10345551 3300031911 Bacteria 1192
119 Ga0307409_100017900 3300031995 Bacteria 4740
120 Ga0307409_100102101 3300031995 Bacteria 2382
121 Ga0307409_100125678 3300031995 Bacteria 2181
122 Ga0307409_100142186 3300031995 Bacteria 2069
123 Ga0307409_100151051 3300031995 Bacteria 2016
124 Ga0307409_100340233 3300031995 Bacteria 1411
125 Ga0307409_100456870 3300031995 Bacteria 1234
126 Ga0307409_100726913 3300031995 Bacteria 994
127 Ga0307409_101032817 3300031995 Bacteria 841
128 Ga0307409_101159085 3300031995 Bacteria 795
129 Ga0307416_100012307 3300032002 Bacteria 5758
130 Ga0307416_100028743 3300032002 Bacteria 4141
131 Ga0307416_100140704 3300032002 Bacteria 2193
132 Ga0307416_100205693 3300032002 Bacteria 1872
133 Ga0307416_100405358 3300032002 Bacteria 1402
134 Ga0307416_100694696 3300032002 Bacteria 1106
135 Ga0307416_100701545 3300032002 Bacteria 1101
136 Ga0307414_10076592 3300032004 Bacteria 2431
137 Ga0307414_10166194 3300032004 Bacteria 1759
138 Ga0307414_11155132 3300032004 Unclassified 716
139 Ga0307414_11393487 3300032004 Bacteria 651
140 Ga0307414_11963020 3300032004 Bacteria 546
141 Ga0307411_10328290 3300032005 Bacteria 1238
142 Ga0307411_10395873 3300032005 Bacteria 1140
143 Ga0307411_10607532 3300032005 Bacteria 941
144 Ga0307415_100017985 3300032126 Bacteria 4254
145 Ga0307415_100024230 3300032126 Bacteria 3785
146 Ga0307415_100107344 3300032126 Bacteria 2063
147 Ga0307415_100260168 3300032126 Bacteria 1415
148 Ga0307415_100301998 3300032126 Bacteria 1326
149 Ga0307415_100534370 3300032126 Bacteria 1032
150 Ga0307415_100656772 3300032126 Bacteria 941
151 Ga0307415_101439619 3300032126 Bacteria 657
152 Ga0395899_0608780 3300037312 Bacteria 695
153 Ga0395900_0102429 3300037418 Bacteria 2941
154 Ga0395900_0252106 3300037418 Bacteria 1766
155 Ga0395898_0106667 3300037466 Bacteria 2687
156 Ga0395898_0734453 3300037466 Bacteria 929
157 Ga0395901_0007985 3300038443 Bacteria 10682
158 Ga0395901_0497649 3300038443 Bacteria 1241
159 Ga0436365_0529637 3300039437 Bacteria 32938
160 Ga0436363_0593366 3300039450 Bacteria 1001
161 Ga0451797_0858925 3300041453 Bacteria 633
162 Ga0451853_2024633 3300041512 Bacteria 2025
163 Ga0466972_0013770 3300044658 Bacteria 4059
164 Ga0466972_0156846 3300044658 Bacteria 1069
165 Ga0466965_0381066 3300044683 Bacteria 777
166 Ga0466966_0030357 3300044684 Bacteria 3510
167 Ga0466961_0064527 3300044693 Bacteria 2327
168 Ga0466961_0351221 3300044693 Bacteria 897
169 Ga0466961_0643690 3300044693 Bacteria 636
170 Ga0466961_0719460 3300044693 Bacteria 598
171 Ga0466963_0001540 3300044694 Bacteria 12487
172 Ga0466963_0097427 3300044694 Bacteria 2009
173 Ga0466963_0380588 3300044694 Bacteria 995
174 Ga0466963_1241087 3300044694 Bacteria 523
175 Ga0466964_0068520 3300044706 Bacteria 1494
176 Ga0466971_0046089 3300044719 Bacteria 1959
177 Ga0466971_0047905 3300044719 Bacteria 1921
178 Ga0466970_0500433 3300044765 Bacteria 700
179 Ga0466957_0029484 3300044842 Bacteria 3272
180 Ga0466960_0014480 3300044901 Bacteria 3377
181 Ga0466960_0045379 3300044901 Bacteria 2099
182 Ga0466960_0430166 3300044901 Bacteria 764
183 Ga0466959_0042233 3300045049 Bacteria 3363
184 Ga0466959_0537384 3300045049 Bacteria 789
185 Ga0466959_0575461 3300045049 Bacteria 758
186 Ga0466958_0003380 3300045836 Bacteria 8276
187 Ga0466958_0067994 3300045836 Bacteria 2177
188 Ga0466958_0181755 3300045836 Bacteria 1335
189 Ga0466958_0317451 3300045836 Bacteria 1001
190 Ga0466958_0827788 3300045836 Bacteria 604
191 Ga0466967_0065130 3300045976 Bacteria 3243
192 Ga0466967_0252646 3300045976 Bacteria 1684
193 Ga0466967_0265236 3300045976 Bacteria 1644
194 Ga0466967_0522669 3300045976 Bacteria 1166
195 Ga0466967_0776144 3300045976 Bacteria 951
196 Ga0466967_1343566 3300045976 Bacteria 712
197 Ga0466967_1545382 3300045976 Bacteria 661
198 Ga0466967_1665483 3300045976 Bacteria 635
199 Ga0466967_1750150 3300045976 Bacteria 619
200 Ga0495603_0779514 3300046455 Bacteria 546
201 Ga0495641_0349151 3300046461 Unclassified 669
202 Ga0495662_0207924 3300046476 Bacteria 965
203 Ga0495620_0208620 3300046515 Bacteria 750
204 Ga0495630_0003143 3300046517 Bacteria 11455
205 Ga0495665_0009520 3300046531 Bacteria 5262
206 Ga0495668_0008421 3300046616 Bacteria 6445
207 Ga0495588_0146082 3300046674 Bacteria 1250
208 Ga0495581_0010523 3300047315 Bacteria 5347
209 Ga0495683_0000420 3300047323 Bacteria 33940
210 Ga0495614_0083052 3300048089 Bacteria 1389
211 Ga0496100_0133583 3300048903 Bacteria 1751
212 Ga0496106_0552277 3300048909 Bacteria 924
213 Ga0496108_0118137 3300048911 Bacteria 2273
214 Ga0496109_1485676 3300048912 Unclassified 613
215 Ga0496112_0116307 3300048915 Bacteria 2645
216 Ga0496113_0639713 3300048916 Bacteria 851
217 Ga0496113_0706009 3300048916 Unclassified 805
218 Ga0496115_1153557 3300048918 Bacteria 585
219 Ga0496118_0487408 3300048921 Bacteria 616
220 Ga0496121_0399324 3300048924 Bacteria 901
221 Ga0496125_0053542 3300048928 Bacteria 3306
222 Ga0501323_050567 3300049539 Bacteria 630
223 Ga0501031_0313292 3300049568 Bacteria 1017
224 Ga0501034_0479271 3300049571 Bacteria 1160
225 Ga0501041_0259059 3300049577 Bacteria 1094
226 Ga0501042_0615040 3300049578 Bacteria 790
227 Ga0501047_0772825 3300049581 Bacteria 776
228 Ga0501048_0715969 3300049582 Bacteria 719
229 Ga0501069_0182174 3300049585 Bacteria 1214
230 Ga0501074_0762707 3300049590 Bacteria 682
231 Ga0501075_1527655 3300049591 Bacteria 505
232 Ga0501076_0168570 3300049592 Bacteria 1785
233 Ga0501076_0338330 3300049592 Bacteria 1235
234 Ga0501256_012215 3300049685 Bacteria 836
235 Ga0501256_013518 3300049685 Bacteria 805
236 Ga0501079_1589407 3300049741 Unclassified 514
237 Ga0501044_0768929 3300049823 Bacteria 844
238 nmdc:mga03683_19104_c1 3300050489 Bacteria 2612
239 nmdc:mga03n38_30333_c1 3300050490 Unclassified 1133
240 nmdc:mga03n38_40256_c1 3300050490 Bacteria 2030
241 nmdc:mga03n38_92135_c1 3300050490 Bacteria 1445
242 nmdc:mga00v17_124138_c1 3300050491 Bacteria 1646
243 nmdc:mga00v17_30288_c1 3300050491 Bacteria 3183
244 nmdc:mga0yw44_237735_c1 3300050492 Bacteria 1210
245 nmdc:mga04h51_328132_c1 3300050495 Bacteria 629
246 nmdc:mga07m45_356207_c1 3300050496 Unclassified 850
247 nmdc:mga07m45_45352_c1 3300050496 Bacteria 2468
248 nmdc:mga07m45_82786_c1 3300050496 Bacteria 1833
249 nmdc:mga0n895_431772_c1 3300050512 Unclassified 1331
250 Ga0495619_0771670 3300053085 Unclassified 651
251 Ga0500616_0005447 3300053153 Bacteria 8637
252 Ga0501084_0794072 3300054114 Unclassified 797
253 Ga0466962_0019607 3300061719 Bacteria 3251
254 Ga0466962_0022723 3300061719 Bacteria 3014

MSA Aligner

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Family Sequences

Sample Scaffold Protein Protein Length
1 3300050512 nmdc:mga0n895_431772_c1 nmdc:mga0n895_431772_c1_230_619 128
2 3300044765 Ga0466970_0500433 Ga0466970_0500433_102_599 137
3 3300031548 Ga0307408_100804765 Ga0307408_1008047652 140
4 3300032126 Ga0307415_100107344 Ga0307415_1001073442 140
5 3300048918 Ga0496115_1153557 Ga0496115_1153557_94_567 140
6 3300025919 Ga0207657_10602239 Ga0207657_106022392 141
7 3300045976 Ga0466967_1545382 Ga0466967_1545382_173_631 141
8 3300049585 Ga0501069_0182174 Ga0501069_0182174_256_684 141
9 iso_pu_bacteria 2675903060 2676493325 144
10 3300005445 Ga0070708_100125665 Ga0070708_1001256652 145
11 3300005467 Ga0070706_100167589 Ga0070706_1001675892 145
12 3300005536 Ga0070697_100110952 Ga0070697_1001109523 145
13 3300025910 Ga0207684_10369654 Ga0207684_103696542 145
14 3300041453 Ga0451797_0858925 Ga0451797_0858925_63_560 145
15 iso_pu_bacteria 2547132424 2548694764 145
16 iso_pu_bacteria 2565956761 2566992800 145
17 iso_pu_bacteria 2622736605 2623501683 145
18 iso_pu_bacteria 2643221692 2644518209 145
19 iso_pu_bacteria 2738541308 2738886736 145
20 iso_pu_bacteria 2738543005 2739203802 145
21 iso_pu_bacteria 2738543011 2739239356 145
22 iso_pu_bacteria 2738543034 2739366833 145
23 iso_pu_bacteria 2744054611 2744954579 145
24 iso_pu_bacteria 2866552031 2866556963 145
25 iso_pu_bacteria 2889300758 2889302009 145
26 iso_pu_bacteria 2904535858 2904540317 145
27 iso_pu_bacteria 2904765812 2904769240 145
28 iso_pu_bacteria 2904770941 2904776312 145
29 iso_pu_bacteria 2908811453 2908814398 145
30 iso_pu_bacteria 2919420072 2919422839 145
31 iso_pu_bacteria 2919432681 2919434908 145
32 iso_pu_bacteria 2919713450 2919718871 145
33 iso_pu_bacteria 2922554459 2922556347 145
34 iso_pu_bacteria 2928142448 2928147293 145
35 iso_pu_bacteria 2939743619 2939748169 145
36 iso_pu_bacteria 2956939328 2956941232 145
37 iso_pu_bacteria 3001119090 3001120332 145
38 iso_pu_bacteria 8056207758 8056207981 145
39 3300005329 Ga0070683_101455126 Ga0070683_1014551262 146
40 3300005435 Ga0070714_100007619 Ga0070714_1000076195 146
41 3300005436 Ga0070713_100034905 Ga0070713_1000349053 146
42 3300005437 Ga0070710_10017247 Ga0070710_100172474 146
43 3300005445 Ga0070708_100002672 Ga0070708_1000026724 146
44 3300005616 Ga0068852_100761326 Ga0068852_1007613262 146
45 3300006173 Ga0070716_100089706 Ga0070716_1000897063 146
46 3300006175 Ga0070712_100194269 Ga0070712_1001942692 146
47 3300014968 Ga0157379_10007266 Ga0157379_100072665 146
48 3300025898 Ga0207692_10347671 Ga0207692_103476712 146
49 3300025928 Ga0207700_10048570 Ga0207700_100485702 146
50 3300025929 Ga0207664_10024807 Ga0207664_100248073 146
51 3300025939 Ga0207665_11129625 Ga0207665_111296251 146
52 3300025944 Ga0207661_10440604 Ga0207661_104406041 146
53 3300028558 Ga0265326_10007266 Ga0265326_100072664 146
54 3300028563 Ga0265319_1000094 Ga0265319_100009416 146
55 3300028577 Ga0265318_10001244 Ga0265318_100012442 146
56 3300028654 Ga0265322_10031884 Ga0265322_100318842 146
57 3300028666 Ga0265336_10000019 Ga0265336_10000019152 146
58 3300028800 Ga0265338_10000413 Ga0265338_1000041323 146
59 3300029957 Ga0265324_10006791 Ga0265324_100067914 146
60 3300031247 Ga0265340_10000004 Ga0265340_10000004152 146
61 3300031249 Ga0265339_10011829 Ga0265339_100118296 146
62 3300031344 Ga0265316_10011874 Ga0265316_100118744 146
63 3300031344 Ga0265316_10069543 Ga0265316_100695432 146
64 3300031711 Ga0265314_10328334 Ga0265314_103283342 146
65 3300031731 Ga0307405_10447971 Ga0307405_104479712 146
66 3300031901 Ga0307406_10038030 Ga0307406_100380302 146
67 3300039437 Ga0436365_0529637 Ga0436365_0529637_4288_4740 146
68 3300044683 Ga0466965_0381066 Ga0466965_0381066_89_532 146
69 3300044901 Ga0466960_0430166 Ga0466960_0430166_83_526 146
70 3300048915 Ga0496112_0116307 Ga0496112_0116307_410_853 146
71 3300048921 Ga0496118_0487408 Ga0496118_0487408_85_528 146
72 3300048924 Ga0496121_0399324 Ga0496121_0399324_179_622 146
73 3300053085 Ga0495619_0771670 Ga0495619_0771670_81_524 146
74 3300053153 Ga0500616_0005447 Ga0500616_0005447_1980_2423 146
75 3300044693 Ga0466961_0351221 Ga0466961_0351221_388_831 147
76 3300044693 Ga0466961_0719460 Ga0466961_0719460_87_533 147
77 3300045049 Ga0466959_0575461 Ga0466959_0575461_288_731 147
78 3300045836 Ga0466958_0067994 Ga0466958_0067994_1530_1976 147
79 3300045836 Ga0466958_0317451 Ga0466958_0317451_235_678 147
80 3300046461 Ga0495641_0349151 Ga0495641_0349151_100_546 147
81 3300046674 Ga0495588_0146082 Ga0495588_0146082_245_691 147
82 3300048089 Ga0495614_0083052 Ga0495614_0083052_837_1283 147
83 3300049592 Ga0501076_0338330 Ga0501076_0338330_358_801 147
84 3300049741 Ga0501079_1589407 Ga0501079_1589407_14_457 147
85 3300054114 Ga0501084_0794072 Ga0501084_0794072_300_743 147
86 3300005436 Ga0070713_100014500 Ga0070713_1000145001 148
87 3300025929 Ga0207664_10337713 Ga0207664_103377132 148
88 3300031901 Ga0307406_10765881 Ga0307406_107658811 148
89 3300037418 Ga0395900_0102429 Ga0395900_0102429_941_1393 148
90 3300037466 Ga0395898_0106667 Ga0395898_0106667_751_1203 148
91 3300045049 Ga0466959_0537384 Ga0466959_0537384_53_505 148
92 3300045976 Ga0466967_0776144 Ga0466967_0776144_306_761 148
93 3300046455 Ga0495603_0779514 Ga0495603_0779514_75_530 148
94 3300046517 Ga0495630_0003143 Ga0495630_0003143_8355_8828 148
95 3300049571 Ga0501034_0479271 Ga0501034_0479271_111_566 148
96 3300003911 JGI25405J52794_10061765 JGI25405J52794_100617651 149
97 3300005327 Ga0070658_10321368 Ga0070658_103213682 149
98 3300005329 Ga0070683_100120222 Ga0070683_1001202222 149
99 3300005329 Ga0070683_100322365 Ga0070683_1003223652 149
100 3300005336 Ga0070680_100222940 Ga0070680_1002229402 149
101 3300005345 Ga0070692_10784325 Ga0070692_107843251 149
102 3300005436 Ga0070713_100002826 Ga0070713_10000282612 149
103 3300005437 Ga0070710_10000274 Ga0070710_1000027424 149
104 3300005439 Ga0070711_100003744 Ga0070711_1000037446 149
105 3300005530 Ga0070679_100079413 Ga0070679_1000794133 149
106 3300005535 Ga0070684_100872687 Ga0070684_1008726872 149
107 3300005563 Ga0068855_100027925 Ga0068855_1000279253 149
108 3300005614 Ga0068856_100018060 Ga0068856_1000180605 149
109 3300005616 Ga0068852_100345692 Ga0068852_1003456922 149
110 3300005616 Ga0068852_101368996 Ga0068852_1013689962 149
111 3300005937 Ga0081455_10000018 Ga0081455_10000018134 149
112 3300006028 Ga0070717_10184046 Ga0070717_101840462 149
113 3300006028 Ga0070717_10462433 Ga0070717_104624332 149
114 3300006038 Ga0075365_10019766 Ga0075365_100197664 149
115 3300006042 Ga0075368_10244100 Ga0075368_102441001 149
116 3300006048 Ga0075363_100010549 Ga0075363_1000105493 149
117 3300006048 Ga0075363_100202930 Ga0075363_1002029302 149
118 3300006051 Ga0075364_10097306 Ga0075364_100973062 149
119 3300006051 Ga0075364_10108104 Ga0075364_101081043 149
120 3300006051 Ga0075364_10223649 Ga0075364_102236492 149
121 3300006163 Ga0070715_10015893 Ga0070715_100158933 149
122 3300006173 Ga0070716_100000176 Ga0070716_10000017621 149
123 3300006175 Ga0070712_100618265 Ga0070712_1006182652 149
124 3300006177 Ga0075362_10050731 Ga0075362_100507312 149
125 3300006178 Ga0075367_10064779 Ga0075367_100647793 149
126 3300006353 Ga0075370_10042472 Ga0075370_100424723 149
127 3300006353 Ga0075370_10081972 Ga0075370_100819723 149
128 3300006353 Ga0075370_10142555 Ga0075370_101425552 149
129 3300006353 Ga0075370_10392880 Ga0075370_103928801 149
130 3300006353 Ga0075370_10409048 Ga0075370_104090481 149
131 3300009148 Ga0105243_10010303 Ga0105243_100103032 149
132 3300009174 Ga0105241_11366806 Ga0105241_113668061 149
133 3300009545 Ga0105237_10678270 Ga0105237_106782701 149
134 3300009545 Ga0105237_11304226 Ga0105237_113042261 149
135 3300009551 Ga0105238_11470588 Ga0105238_114705881 149
136 3300010375 Ga0105239_10237008 Ga0105239_102370082 149
137 3300010375 Ga0105239_10254415 Ga0105239_102544152 149
138 3300013105 Ga0157369_10189585 Ga0157369_101895852 149
139 3300013105 Ga0157369_10934498 Ga0157369_109344981 149
140 3300013307 Ga0157372_10126319 Ga0157372_101263193 149
141 3300020081 Ga0206354_11200228 Ga0206354_112002284 149
142 3300020081 Ga0206354_11487554 Ga0206354_114875542 149
143 3300020082 Ga0206353_10345637 Ga0206353_103456372 149
144 3300020082 Ga0206353_11385930 Ga0206353_113859302 149
145 3300020082 Ga0206353_11731352 Ga0206353_117313524 149
146 3300025898 Ga0207692_10059476 Ga0207692_100594763 149
147 3300025906 Ga0207699_10000456 Ga0207699_1000045613 149
148 3300025909 Ga0207705_10388478 Ga0207705_103884782 149
149 3300025917 Ga0207660_10469696 Ga0207660_104696962 149
150 3300025928 Ga0207700_10007175 Ga0207700_100071756 149
151 3300025928 Ga0207700_10277695 Ga0207700_102776951 149
152 3300025929 Ga0207664_10733873 Ga0207664_107338731 149
153 3300025929 Ga0207664_11090596 Ga0207664_110905961 149
154 3300025932 Ga0207690_10468168 Ga0207690_104681681 149
155 3300025935 Ga0207709_10002228 Ga0207709_1000222813 149
156 3300025939 Ga0207665_10000362 Ga0207665_100003628 149
157 3300025944 Ga0207661_10036515 Ga0207661_100365154 149
158 3300025944 Ga0207661_10148742 Ga0207661_101487423 149
159 3300025949 Ga0207667_10012473 Ga0207667_100124736 149
160 3300027866 Ga0209813_10292462 Ga0209813_102924621 149
161 3300031548 Ga0307408_100246138 Ga0307408_1002461382 149
162 3300031548 Ga0307408_101004200 Ga0307408_1010042001 149
163 3300031731 Ga0307405_10195597 Ga0307405_101955972 149
164 3300031731 Ga0307405_11000907 Ga0307405_110009072 149
165 3300031824 Ga0307413_10050516 Ga0307413_100505162 149
166 3300031852 Ga0307410_10026960 Ga0307410_100269603 149
167 3300031852 Ga0307410_10133088 Ga0307410_101330882 149
168 3300031852 Ga0307410_10275707 Ga0307410_102757072 149
169 3300031852 Ga0307410_10426635 Ga0307410_104266352 149
170 3300031901 Ga0307406_10223577 Ga0307406_102235771 149
171 3300031901 Ga0307406_10267875 Ga0307406_102678752 149
172 3300031903 Ga0307407_10006751 Ga0307407_100067512 149
173 3300031903 Ga0307407_10043535 Ga0307407_100435352 149
174 3300031903 Ga0307407_10091803 Ga0307407_100918032 149
175 3300031903 Ga0307407_10397115 Ga0307407_103971152 149
176 3300031911 Ga0307412_10345551 Ga0307412_103455512 149
177 3300031995 Ga0307409_100017900 Ga0307409_1000179005 149
178 3300031995 Ga0307409_100102101 Ga0307409_1001021013 149
179 3300031995 Ga0307409_100125678 Ga0307409_1001256782 149
180 3300031995 Ga0307409_100142186 Ga0307409_1001421862 149
181 3300031995 Ga0307409_100151051 Ga0307409_1001510512 149
182 3300031995 Ga0307409_100340233 Ga0307409_1003402332 149
183 3300031995 Ga0307409_100456870 Ga0307409_1004568702 149
184 3300031995 Ga0307409_100726913 Ga0307409_1007269132 149
185 3300031995 Ga0307409_101032817 Ga0307409_1010328172 149
186 3300031995 Ga0307409_101159085 Ga0307409_1011590851 149
187 3300032002 Ga0307416_100012307 Ga0307416_1000123076 149
188 3300032002 Ga0307416_100028743 Ga0307416_1000287432 149
189 3300032002 Ga0307416_100140704 Ga0307416_1001407042 149
190 3300032002 Ga0307416_100205693 Ga0307416_1002056933 149
191 3300032002 Ga0307416_100405358 Ga0307416_1004053582 149
192 3300032002 Ga0307416_100694696 Ga0307416_1006946962 149
193 3300032002 Ga0307416_100701545 Ga0307416_1007015452 149
194 3300032004 Ga0307414_10076592 Ga0307414_100765922 149
195 3300032004 Ga0307414_10166194 Ga0307414_101661942 149
196 3300032004 Ga0307414_11155132 Ga0307414_111551321 149
197 3300032004 Ga0307414_11393487 Ga0307414_113934872 149
198 3300032004 Ga0307414_11963020 Ga0307414_119630201 149
199 3300032005 Ga0307411_10328290 Ga0307411_103282901 149
200 3300032005 Ga0307411_10395873 Ga0307411_103958732 149
201 3300032005 Ga0307411_10607532 Ga0307411_106075322 149
202 3300032126 Ga0307415_100017985 Ga0307415_1000179852 149
203 3300032126 Ga0307415_100024230 Ga0307415_1000242304 149
204 3300032126 Ga0307415_100260168 Ga0307415_1002601682 149
205 3300032126 Ga0307415_100301998 Ga0307415_1003019982 149
206 3300032126 Ga0307415_100534370 Ga0307415_1005343702 149
207 3300032126 Ga0307415_100656772 Ga0307415_1006567721 149
208 3300032126 Ga0307415_101439619 Ga0307415_1014396192 149
209 3300037312 Ga0395899_0608780 Ga0395899_0608780_21_482 149
210 3300037418 Ga0395900_0252106 Ga0395900_0252106_1236_1694 149
211 3300037466 Ga0395898_0734453 Ga0395898_0734453_446_904 149
212 3300038443 Ga0395901_0007985 Ga0395901_0007985_7093_7554 149
213 3300038443 Ga0395901_0497649 Ga0395901_0497649_174_632 149
214 3300039450 Ga0436363_0593366 Ga0436363_0593366_151_612 149
215 3300041512 Ga0451853_2024633 Ga0451853_2024633_394_858 149
216 3300044658 Ga0466972_0013770 Ga0466972_0013770_1383_1853 149
217 3300044658 Ga0466972_0156846 Ga0466972_0156846_31_483 149
218 3300044684 Ga0466966_0030357 Ga0466966_0030357_713_1171 149
219 3300044693 Ga0466961_0064527 Ga0466961_0064527_1831_2289 149
220 3300044693 Ga0466961_0643690 Ga0466961_0643690_159_614 149
221 3300044694 Ga0466963_0001540 Ga0466963_0001540_3146_3616 149
222 3300044694 Ga0466963_0097427 Ga0466963_0097427_1532_1990 149
223 3300044694 Ga0466963_0380588 Ga0466963_0380588_364_822 149
224 3300044694 Ga0466963_1241087 Ga0466963_1241087_35_490 149
225 3300044706 Ga0466964_0068520 Ga0466964_0068520_261_719 149
226 3300044719 Ga0466971_0046089 Ga0466971_0046089_40_510 149
227 3300044719 Ga0466971_0047905 Ga0466971_0047905_811_1269 149
228 3300044842 Ga0466957_0029484 Ga0466957_0029484_1331_1789 149
229 3300044901 Ga0466960_0014480 Ga0466960_0014480_575_1036 149
230 3300044901 Ga0466960_0045379 Ga0466960_0045379_1043_1504 149
231 3300045049 Ga0466959_0042233 Ga0466959_0042233_250_708 149
232 3300045836 Ga0466958_0003380 Ga0466958_0003380_4600_5070 149
233 3300045836 Ga0466958_0181755 Ga0466958_0181755_623_1078 149
234 3300045836 Ga0466958_0827788 Ga0466958_0827788_36_491 149
235 3300045976 Ga0466967_0065130 Ga0466967_0065130_907_1368 149
236 3300045976 Ga0466967_0252646 Ga0466967_0252646_966_1424 149
237 3300045976 Ga0466967_0265236 Ga0466967_0265236_607_1056 149
238 3300045976 Ga0466967_0522669 Ga0466967_0522669_213_671 149
239 3300045976 Ga0466967_1343566 Ga0466967_1343566_102_554 149
240 3300045976 Ga0466967_1665483 Ga0466967_1665483_22_492 149
241 3300045976 Ga0466967_1750150 Ga0466967_1750150_39_503 149
242 3300046476 Ga0495662_0207924 Ga0495662_0207924_450_902 149
243 3300046515 Ga0495620_0208620 Ga0495620_0208620_121_591 149
244 3300046531 Ga0495665_0009520 Ga0495665_0009520_4212_4664 149
245 3300046616 Ga0495668_0008421 Ga0495668_0008421_1843_2295 149
246 3300047315 Ga0495581_0010523 Ga0495581_0010523_3214_3666 149
247 3300047323 Ga0495683_0000420 Ga0495683_0000420_22564_23019 149
248 3300048903 Ga0496100_0133583 Ga0496100_0133583_912_1376 149
249 3300048909 Ga0496106_0552277 Ga0496106_0552277_353_859 149
250 3300048911 Ga0496108_0118137 Ga0496108_0118137_1267_1719 149
251 3300048912 Ga0496109_1485676 Ga0496109_1485676_115_573 149
252 3300048916 Ga0496113_0639713 Ga0496113_0639713_277_741 149
253 3300048916 Ga0496113_0706009 Ga0496113_0706009_183_641 149
254 3300048928 Ga0496125_0053542 Ga0496125_0053542_463_915 149
255 3300049539 Ga0501323_050567 Ga0501323_050567_37_489 149
256 3300049568 Ga0501031_0313292 Ga0501031_0313292_323_781 149
257 3300049577 Ga0501041_0259059 Ga0501041_0259059_59_517 149
258 3300049578 Ga0501042_0615040 Ga0501042_0615040_282_740 149
259 3300049581 Ga0501047_0772825 Ga0501047_0772825_75_527 149
260 3300049582 Ga0501048_0715969 Ga0501048_0715969_121_585 149
261 3300049590 Ga0501074_0762707 Ga0501074_0762707_198_662 149
262 3300049591 Ga0501075_1527655 Ga0501075_1527655_24_476 149
263 3300049592 Ga0501076_0168570 Ga0501076_0168570_1049_1507 149
264 3300049685 Ga0501256_012215 Ga0501256_012215_330_800 149
265 3300049685 Ga0501256_013518 Ga0501256_013518_180_650 149
266 3300049823 Ga0501044_0768929 Ga0501044_0768929_112_564 149
267 3300050489 nmdc:mga03683_19104_c1 nmdc:mga03683_19104_c1_490_942 149
268 3300050490 nmdc:mga03n38_30333_c1 nmdc:mga03n38_30333_c1_553_1005 149
269 3300050490 nmdc:mga03n38_40256_c1 nmdc:mga03n38_40256_c1_699_1151 149
270 3300050490 nmdc:mga03n38_92135_c1 nmdc:mga03n38_92135_c1_624_1076 149
271 3300050491 nmdc:mga00v17_124138_c1 nmdc:mga00v17_124138_c1_453_905 149
272 3300050491 nmdc:mga00v17_30288_c1 nmdc:mga00v17_30288_c1_2382_2834 149
273 3300050492 nmdc:mga0yw44_237735_c1 nmdc:mga0yw44_237735_c1_75_527 149
274 3300050495 nmdc:mga04h51_328132_c1 nmdc:mga04h51_328132_c1_54_506 149
275 3300050496 nmdc:mga07m45_356207_c1 nmdc:mga07m45_356207_c1_109_561 149
276 3300050496 nmdc:mga07m45_45352_c1 nmdc:mga07m45_45352_c1_1432_1884 149
277 3300050496 nmdc:mga07m45_82786_c1 nmdc:mga07m45_82786_c1_108_560 149
278 3300061719 Ga0466962_0019607 Ga0466962_0019607_1343_1801 149
279 3300061719 Ga0466962_0022723 Ga0466962_0022723_2310_2780 149

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00582

Usp

Universal stress protein family

32

178

0.96

Structural Annotation

Top 5 Hits

ID Description Score Start End
5ahw-assembly3.cif.gz_E crystal structure of universal stress protein msmeg_3811 in complex with camp 0.9276 3 149
5ahw-assembly1.cif.gz_B crystal structure of universal stress protein msmeg_3811 in complex with camp 0.925 3 149
5ahw-assembly2.cif.gz_D crystal structure of universal stress protein msmeg_3811 in complex with camp 0.9209 3 149
5ahw-assembly3.cif.gz_E crystal structure of universal stress protein msmeg_3811 in complex with camp 0.9131 3 149
5ahw-assembly1.cif.gz_B crystal structure of universal stress protein msmeg_3811 in complex with camp 0.9108 3 149
ID Description Score Start End Superfamily
5ahwB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.925 3 149 3.40.50.620
5ahwB00 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.9108 3 149 3.40.50.620
af_P9WFC9_1_145_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8513 1 147 3.40.50.620
af_Q54L57_1_123_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8472 6 146 3.40.50.620
af_P9WFC9_1_145_3.40.50.620 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;HUPs 0.8401 1 147 3.40.50.620
ID Description Score Start End GO Terms
AF-A0A7W0CRM8-F1-model_v4 Nucleotide-binding universal stress UspA family protein 0.9248 3 149 GO:0016020
AF-A0A853B510-F1-model_v4 Nucleotide-binding universal stress UspA family protein 0.9069 22 149
AF-A0A7W0CRM8-F1-model_v4 Nucleotide-binding universal stress UspA family protein 0.9069 3 149 GO:0016020
AF-A0A853B510-F1-model_v4 Nucleotide-binding universal stress UspA family protein 0.8934 22 149
AF-A0A538LZC9-F1-model_v4 Universal stress protein 0.8822 4 149

Feature Viewer

pLDDT pTM Quality
88.35 0.84 High
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Predicted Structure (AlphaFold2)

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