F382775

General Info

Members Datasets Scaffolds Average Seq Length
279 185 558 595

Family's Representative Sequence

Representative Sequence 3300002459|JGI24751J29686_10000155|JGI24751J29686_1000015517
Length 715
Sequence MRTHACGELRAEHAGERVALCGWVWRRRDHGGVTFVDLRDREGLVQLVFHPEDAPDAHAAAQHLSSESVVRVSGEVRARPEGTANPELPTGEVEIAVSELEVLAEAETPPFVIEDRIEASEELRLRYRYLDLRRPEMTKVLEMRHRINRIVRDEMESRGFREVETPLLGRSTPEGARDFMVPSRLWPGTFYALPQSPQQLKQLLMVAGQDRYYQIVRCLRDEQPRADRSFEFTQLDVEMSFVDEEDVFAVIEPLYARIVREIQGVEVPTPFPRMTYDEMMDRYGSDKPDLRYGMELANVGEVFAGTGFRAFASALGSEGLVKAFAAPGGVQLSRKELDELVQVAKSRGAAGVVWIAVEDDGVRSPVEKHLAPEEIEGVRRATGAGSGDLILIVADKPDRTNVALDGLRRHLADRLGLIPDGEWRFCWYSEPPLFDWSDEEGKWVSNHHPFTSPLTDDLTPETAKARAYDLTLNGFELGGGSIRIHRPDVQRRVFEVLGLTHEQTEEQFGHLLRAFRFGVPPHGGIAMGIDRLVMLMAGKDTIRDVTAFPKAQSGADPLTGAPAPATEEQLRELGIAVVVPRARTMVELTEKDIAMLSGTNYATFVTVNPDGSPHATITWVDEADGHVLVNTAEGRIKHRNCAANPKVALTVMQDGDAYDWISITGTVVAFETGEHAEKHIDELSQRYDGHGYTYTPGQVREILKIRPKRIIRYKD

Samples

Sample ID Description Type Environment
1 3300002459 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6 Metagenome Rhizosphere
2 3300001977 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5 Metagenome Rhizosphere
3 3300003203 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
9 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
10 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
11 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
12 3300005440 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG Metagenome Rhizosphere
13 3300005441 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG Metagenome Rhizosphere
14 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
15 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
16 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
17 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
18 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
19 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
20 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
21 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
22 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
23 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
24 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
25 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
26 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
27 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
28 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
29 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
30 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
31 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
32 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
35 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
36 3300006177 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 Metagenome Endosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
43 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
44 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
45 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
46 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
48 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
49 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
50 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
51 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
52 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
53 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
54 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
55 3300022467 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2) (version 2) Metatranscriptome Rhizosphere
56 3300025885 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
57 3300025904 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes) (version 2) Metagenome Rhizosphere
58 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
59 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
80 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
81 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
82 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
83 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
84 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
85 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
86 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
87 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
88 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
89 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
90 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
91 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
92 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
93 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
94 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
95 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
96 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
97 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
98 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
99 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
100 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
101 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
102 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
103 3300039450 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7 v2 Metagenome Unclassified
104 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
105 3300041408 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z062817_5195 Metagenome Rhizosphere
106 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
107 3300042127 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC1030F_E14_070516_91 Metagenome Rhizosphere
108 3300042532 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0126L_E14_070516_92 Metagenome Rhizosphere
109 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
110 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
111 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
112 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
113 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
114 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
115 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
116 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
117 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
118 3300046520 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co2_47_23 rhizosphere Metagenome Rhizosphere
119 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
120 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
121 3300046535 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL1_28_16 rhizosphere Metagenome Rhizosphere
122 3300046557 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL1_25_34 rhizosphere Metagenome Rhizosphere
123 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
124 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
125 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
126 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
127 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
128 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
129 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
130 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
131 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
132 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
133 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
134 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
135 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
136 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
140 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
149 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
150 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
151 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
152 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
153 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
154 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
155 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
156 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
157 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
158 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
159 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
160 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
161 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
162 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
163 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
165 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
166 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
167 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
168 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
169 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
170 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
171 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
172 3300053088 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 endosphere Metagenome Endosphere
173 3300053094 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 endosphere Metagenome Endosphere
174 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
175 3300053098 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co1_16_8 endosphere Metagenome Endosphere
176 3300053103 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co1_30_3 endosphere Metagenome Endosphere
177 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
178 3300053130 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 endosphere Metagenome Endosphere
179 3300053142 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co1_31_6 endosphere Metagenome Endosphere
180 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
181 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
182 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
183 2687453257 Planctomyces sp. SH-PL62 Isolate Unclassified
184 2889415604 Paludisphaera rhizosphaerae JC665 Isolate Rhizosphere
185 2920107658 Aquisphaera insulae JC669 Isolate Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 98.57
Metatranscriptomes 0.36
Isolates 1.08

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 5.02
Nodule 0
Rhizoplane 1.43
Rhizosphere 90.68
Stem 0
Stem Tuber 0
Unclassified 0.72

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24751J29686_10000155 3300002459 Bacteria 32889
2 JGI24746J21847_1000203 3300001977 Bacteria 7948
3 JGI25406J46586_10005185 3300003203 Bacteria 6043
4 Ga0070658_10042759 3300005327 Bacteria 3660
5 Ga0070676_10000001 3300005328 Bacteria 443830
6 Ga0070683_100014423 3300005329 Bacteria 6912
7 Ga0070683_100015378 3300005329 Bacteria 6720
8 Ga0070670_100012990 3300005331 Bacteria 7131
9 Ga0070661_100001731 3300005344 Bacteria 15123
10 Ga0070703_10000006 3300005406 Bacteria 112467
11 Ga0070703_10002367 3300005406 Bacteria 5440
12 Ga0070714_100074622 3300005435 Bacteria 2941
13 Ga0070713_100003528 3300005436 Bacteria 10337
14 Ga0070713_100008912 3300005436 Bacteria 7145
15 Ga0070705_100002520 3300005440 Bacteria 9206
16 Ga0070700_100012521 3300005441 Bacteria 4737
17 Ga0070694_100025034 3300005444 Bacteria 3857
18 Ga0070708_100000132 3300005445 Bacteria 50980
19 Ga0070708_100001387 3300005445 Bacteria 18518
20 Ga0070708_100165177 3300005445 Bacteria 2065
21 Ga0070663_100062925 3300005455 Bacteria 2677
22 Ga0068867_100001002 3300005459 Bacteria 19271
23 Ga0070706_100000056 3300005467 Bacteria 137252
24 Ga0070706_100000368 3300005467 Bacteria 54308
25 Ga0070706_100000394 3300005467 Bacteria 52537
26 Ga0070706_100000908 3300005467 Bacteria 32404
27 Ga0070706_100001533 3300005467 Bacteria 24139
28 Ga0070706_100176179 3300005467 Bacteria 1997
29 Ga0070707_100003598 3300005468 Bacteria 14612
30 Ga0070707_100013137 3300005468 Bacteria 7739
31 Ga0070707_100013946 3300005468 Bacteria 7527
32 Ga0070707_100019930 3300005468 Bacteria 6322
33 Ga0070707_100045556 3300005468 Bacteria 4198
34 Ga0070707_100092948 3300005468 Bacteria 2920
35 Ga0070698_100001321 3300005471 Bacteria 27622
36 Ga0070698_100044782 3300005471 Bacteria 4528
37 Ga0070698_100049617 3300005471 Bacteria 4282
38 Ga0070699_100000133 3300005518 Bacteria 68871
39 Ga0070699_100000331 3300005518 Bacteria 45844
40 Ga0070699_100018827 3300005518 Bacteria 5932
41 Ga0070699_100023633 3300005518 Bacteria 5295
42 Ga0070699_100057080 3300005518 Bacteria 3382
43 Ga0070684_100000628 3300005535 Bacteria 24312
44 Ga0070684_100009418 3300005535 Bacteria 7691
45 Ga0070697_100004217 3300005536 Bacteria 11013
46 Ga0070697_100040056 3300005536 Bacteria 3790
47 Ga0070696_100050807 3300005546 Bacteria 2882
48 Ga0070704_100000379 3300005549 Bacteria 20220
49 Ga0070664_100001207 3300005564 Bacteria 20583
50 Ga0070664_100041389 3300005564 Bacteria 3888
51 Ga0068857_100000754 3300005577 Bacteria 24022
52 Ga0068866_10000840 3300005718 Bacteria 13623
53 Ga0068866_10015084 3300005718 Bacteria 3427
54 Ga0068870_10000411 3300005840 Bacteria 16130
55 Ga0068863_100031866 3300005841 Bacteria 5028
56 Ga0068860_100016045 3300005843 Bacteria 7306
57 Ga0068862_100033091 3300005844 Bacteria 4367
58 Ga0081455_10006723 3300005937 Bacteria 12281
59 Ga0081455_10011251 3300005937 Bacteria 9003
60 Ga0081455_10011807 3300005937 Bacteria 8747
61 Ga0081455_10013868 3300005937 Bacteria 7926
62 Ga0081539_10000712 3300005985 Bacteria 66647
63 Ga0081539_10001670 3300005985 Bacteria 35914
64 Ga0075432_10002699 3300006058 Bacteria 5936
65 Ga0075362_10000067 3300006177 Bacteria 28782
66 Ga0075428_100018761 3300006844 Bacteria 7649
67 Ga0075428_100111746 3300006844 Bacteria 2976
68 Ga0075430_100000310 3300006846 Bacteria 34603
69 Ga0075431_100000250 3300006847 Bacteria 40810
70 Ga0075431_100077276 3300006847 Bacteria 3436
71 Ga0075433_10002720 3300006852 Bacteria 13508
72 Ga0075434_100072719 3300006871 Bacteria 3430
73 Ga0075429_100000383 3300006880 Bacteria 32608
74 Ga0068865_100019243 3300006881 Bacteria 4418
75 Ga0111539_10000517 3300009094 Bacteria 48951
76 Ga0111539_10023794 3300009094 Bacteria 7527
77 Ga0111539_10027802 3300009094 Bacteria 6907
78 Ga0111539_10035910 3300009094 Bacteria 5999
79 Ga0111539_10082062 3300009094 Bacteria 3791
80 Ga0105245_10044911 3300009098 Bacteria 3944
81 Ga0114129_10002418 3300009147 Bacteria 25919
82 Ga0114129_10005378 3300009147 Bacteria 18072
83 Ga0114129_10009628 3300009147 Bacteria 13786
84 Ga0114129_10037916 3300009147 Bacteria 6800
85 Ga0114129_10089303 3300009147 Bacteria 4271
86 Ga0105243_10000081 3300009148 Bacteria 108530
87 Ga0105242_10006084 3300009176 Bacteria 9306
88 Ga0105239_10087228 3300010375 Bacteria 3440
89 Ga0157378_10005898 3300013297 Bacteria 10731
90 Ga0163162_10032527 3300013306 Bacteria 5181
91 Ga0157376_10004877 3300014969 Bacteria 9347
92 Ga0213872_10016839 3300021361 Bacteria 3388
93 Ga0213876_10000340 3300021384 Bacteria 40664
94 Ga0224712_10006577 3300022467 Bacteria 3327
95 Ga0207653_10000301 3300025885 Bacteria 28479
96 Ga0207647_10059406 3300025904 Bacteria 2340
97 Ga0207645_10064202 3300025907 Bacteria 2346
98 Ga0207643_10000065 3300025908 Bacteria 69837
99 Ga0207684_10000005 3300025910 Bacteria 736617
100 Ga0207684_10000166 3300025910 Bacteria 111380
101 Ga0207684_10000466 3300025910 Bacteria 52505
102 Ga0207684_10000803 3300025910 Bacteria 36344
103 Ga0207695_10033938 3300025913 Bacteria 5556
104 Ga0207662_10017062 3300025918 Bacteria 4103
105 Ga0207649_10003111 3300025920 Bacteria 9103
106 Ga0207646_10000120 3300025922 Bacteria 106913
107 Ga0207646_10003243 3300025922 Bacteria 18543
108 Ga0207646_10005001 3300025922 Bacteria 14135
109 Ga0207646_10050459 3300025922 Bacteria 3724
110 Ga0207650_10007271 3300025925 Bacteria 7539
111 Ga0207650_10024400 3300025925 Bacteria 4298
112 Ga0207687_10025941 3300025927 Bacteria 3922
113 Ga0207700_10007742 3300025928 Bacteria 6599
114 Ga0207700_10021109 3300025928 Bacteria 4439
115 Ga0207709_10000090 3300025935 Bacteria 146176
116 Ga0207691_10164906 3300025940 Bacteria 1942
117 Ga0207661_10000936 3300025944 Bacteria 19203
118 Ga0207661_10090211 3300025944 Bacteria 2552
119 Ga0207679_10006869 3300025945 Bacteria 7213
120 Ga0207679_10027918 3300025945 Bacteria 3910
121 Ga0207712_10012682 3300025961 Bacteria 5385
122 Ga0207640_10051789 3300025981 Bacteria 2670
123 Ga0207678_10141237 3300026067 Bacteria 2055
124 Ga0207708_10022560 3300026075 Bacteria 4754
125 Ga0207648_10000553 3300026089 Bacteria 41936
126 Ga0207676_10000638 3300026095 Bacteria 28145
127 Ga0207674_10000316 3300026116 Bacteria 61727
128 Ga0207674_10001645 3300026116 Bacteria 28764
129 Ga0207428_10006369 3300027907 Bacteria 10920
130 Ga0207428_10010245 3300027907 Bacteria 8377
131 Ga0207428_10015317 3300027907 Bacteria 6636
132 Ga0265319_1003946 3300028563 Bacteria 7529
133 Ga0265334_10002030 3300028573 Bacteria 9581
134 Ga0265318_10002833 3300028577 Bacteria 9052
135 Ga0265338_10021546 3300028800 Bacteria 6714
136 Ga0265338_10074380 3300028800 Bacteria 2890
137 Ga0265339_10031447 3300031249 Bacteria 2999
138 Ga0307513_10000742 3300031456 Bacteria 46923
139 Ga0307408_100000052 3300031548 Bacteria 149094
140 Ga0316575_10012670 3300031665 Bacteria 3140
141 Ga0265314_10008932 3300031711 Bacteria 8535
142 Ga0307413_10008420 3300031824 Bacteria 4870
143 Ga0307410_10002130 3300031852 Bacteria 9405
144 Ga0307412_10000035 3300031911 Bacteria 203028
145 Ga0307411_10033769 3300032005 Bacteria 3176
146 Ga0373937_0040604 3300036401 Bacteria 4241
147 Ga0373925_0000183 3300037068 Bacteria 68921
148 Ga0395899_0003932 3300037312 Bacteria 11712
149 Ga0395900_0000671 3300037418 Bacteria 45535
150 Ga0395905_0000093 3300037471 Bacteria 149291
151 Ga0395905_0001844 3300037471 Bacteria 24458
152 Ga0395905_0254632 3300037471 Bacteria 1640
153 Ga0436364_1446484 3300037853 Bacteria 9425
154 Ga0436364_1526475 3300037853 Bacteria 5264
155 Ga0395901_0002381 3300038443 Bacteria 19127
156 Ga0395901_0017631 3300038443 Bacteria 7291
157 Ga0395901_0025009 3300038443 Bacteria 6129
158 Ga0436365_0170146 3300039437 Bacteria 65733
159 Ga0436365_1508062 3300039437 Bacteria 22768
160 Ga0436360_0213145 3300039438 Bacteria 5477
161 Ga0436360_0853228 3300039438 Bacteria 6900
162 Ga0436360_1056455 3300039438 Unclassified 2857
163 Ga0436361_0292998 3300039447 Bacteria 8841
164 Ga0436361_0844892 3300039447 Unclassified 3270
165 Ga0436363_0653673 3300039450 Bacteria 25179
166 Ga0436362_0646389 3300039453 Bacteria 12347
167 Ga0439453_0001904 3300041408 Bacteria 2786
168 Ga0439463_011005 3300042016 Bacteria 2223
169 Ga0450890_000005 3300042127 Bacteria 90383
170 Ga0450893_0000536 3300042532 Bacteria 5391
171 Ga0450893_0001815 3300042532 Bacteria 3287
172 Ga0451577_0000064 3300042876 Bacteria 262482
173 Ga0453683_0005558 3300044673 Bacteria 8775
174 Ga0453683_0013154 3300044673 Bacteria 5411
175 Ga0453684_0000061 3300044712 Bacteria 489946
176 Ga0453684_0001259 3300044712 Bacteria 76194
177 Ga0453684_0001645 3300044712 Bacteria 60688
178 Ga0453684_0009959 3300044712 Bacteria 16385
179 Ga0453684_0195813 3300044712 Bacteria 2360
180 Ga0451576_0000850 3300045051 Bacteria 59283
181 Ga0451576_0004846 3300045051 Bacteria 17229
182 Ga0466967_0000865 3300045976 Bacteria 16128
183 Ga0495603_0001869 3300046455 Bacteria 12408
184 Ga0495603_0027588 3300046455 Bacteria 3426
185 Ga0495629_0000005 3300046459 Bacteria 404868
186 Ga0495584_0034271 3300046491 Bacteria 2569
187 Ga0495585_0009426 3300046492 Bacteria 5856
188 Ga0495637_0025546 3300046520 Bacteria 2661
189 Ga0495644_0027727 3300046523 Bacteria 2145
190 Ga0495663_0021519 3300046525 Bacteria 1858
191 Ga0495586_0000307 3300046535 Bacteria 30983
192 Ga0495622_0003546 3300046557 Bacteria 7338
193 Ga0495656_0008736 3300046615 Bacteria 3627
194 Ga0495635_0000647 3300046663 Bacteria 22370
195 Ga0495658_0017425 3300046683 Bacteria 3710
196 Ga0495613_0004202 3300046689 Bacteria 10780
197 Ga0495670_0005422 3300046691 Bacteria 6262
198 Ga0495581_0013806 3300047315 Bacteria 4682
199 Ga0495680_0000860 3300047322 Bacteria 33775
200 Ga0495684_0005949 3300047471 Bacteria 9476
201 Ga0495684_0076203 3300047471 Bacteria 2547
202 Ga0495602_0022499 3300048088 Bacteria 6168
203 Ga0496106_0005477 3300048909 Bacteria 9395
204 Ga0496107_0023666 3300048910 Bacteria 4341
205 Ga0496111_0019730 3300048914 Bacteria 4688
206 Ga0496112_0002286 3300048915 Bacteria 15326
207 Ga0501031_0048774 3300049568 Bacteria 2759
208 Ga0501032_0003636 3300049569 Bacteria 11726
209 Ga0501033_0026877 3300049570 Bacteria 4330
210 Ga0501033_0032019 3300049570 Bacteria 3947
211 Ga0501034_0000450 3300049571 Bacteria 68026
212 Ga0501034_0007394 3300049571 Bacteria 11698
213 Ga0501034_0016223 3300049571 Bacteria 7643
214 Ga0501036_0037658 3300049572 Bacteria 4091
215 Ga0501037_0072454 3300049573 Bacteria 2505
216 Ga0501039_0048083 3300049575 Bacteria 3297
217 Ga0501040_0026992 3300049576 Bacteria 3863
218 Ga0501041_0027244 3300049577 Bacteria 3443
219 Ga0501042_0040064 3300049578 Bacteria 3330
220 Ga0501042_0059231 3300049578 Bacteria 2734
221 Ga0501043_0080022 3300049579 Bacteria 2567
222 Ga0501047_0006319 3300049581 Bacteria 11145
223 Ga0501047_0023486 3300049581 Bacteria 5919
224 Ga0501047_0040220 3300049581 Bacteria 4522
225 Ga0501068_0020371 3300049584 Bacteria 3862
226 Ga0501069_0001303 3300049585 Bacteria 12236
227 Ga0501070_0095722 3300049586 Bacteria 2456
228 Ga0501071_0042810 3300049587 Bacteria 3245
229 Ga0501072_0016498 3300049588 Bacteria 5673
230 Ga0501073_0004158 3300049589 Bacteria 10855
231 Ga0501073_0028254 3300049589 Bacteria 4008
232 Ga0501074_0036303 3300049590 Bacteria 3570
233 Ga0501075_0046595 3300049591 Bacteria 3256
234 Ga0501076_0028864 3300049592 Bacteria 4311
235 Ga0501077_0020552 3300049593 Bacteria 4179
236 Ga0501077_0081217 3300049593 Bacteria 2053
237 Ga0501079_0033114 3300049741 Bacteria 3974
238 Ga0501080_0063911 3300049742 Bacteria 3424
239 Ga0501081_0038854 3300049743 Bacteria 3254
240 Ga0501083_0001619 3300049744 Bacteria 15392
241 Ga0501035_0016916 3300049822 Bacteria 6723
242 Ga0501044_0000362 3300049823 Bacteria 56873
243 Ga0501044_0009775 3300049823 Bacteria 10431
244 Ga0501044_0018288 3300049823 Bacteria 7511
245 Ga0501044_0032906 3300049823 Bacteria 5450
246 Ga0501045_0012245 3300049824 Bacteria 6042
247 Ga0501045_0027393 3300049824 Bacteria 4106
248 nmdc:mga03683_199_c1 3300050489 Bacteria 8520
249 nmdc:mga03n38_10047_c1 3300050490 Bacteria 3467
250 nmdc:mga0k408_900_c1 3300050493 Bacteria 16259
251 nmdc:mga05p37_1881_c2 3300050507 Bacteria 16088
252 nmdc:mga05p37_40310_c1 3300050507 Bacteria 5734
253 nmdc:mga05p37_4561_c1 3300050507 Bacteria 16193
254 nmdc:mga0qj67_28783_c1 3300050509 Bacteria 4315
255 nmdc:mga08y16_13362_c1 3300050511 Bacteria 8637
256 nmdc:mga08y16_40037_c1 3300050511 Bacteria 4914
257 nmdc:mga08y16_56803_c1 3300050511 Bacteria 4090
258 nmdc:mga08y16_772_c1 3300050511 Bacteria 30501
259 nmdc:mga08y16_78020_c1 3300050511 Bacteria 3453
260 nmdc:mga0a205_26_c2 3300050515 Bacteria 68852
261 nmdc:mga0a205_4192_c1 3300050515 Bacteria 12927
262 nmdc:mga0a205_57764_c1 3300050515 Bacteria 3747
263 Ga0500644_0000001 3300053088 Bacteria 529637
264 Ga0500566_0000033 3300053094 Bacteria 69487
265 Ga0500641_0000712 3300053096 Bacteria 12027
266 Ga0500650_0000219 3300053098 Bacteria 13958
267 Ga0500555_000044 3300053103 Bacteria 64435
268 Ga0500556_0000010 3300053104 Bacteria 258288
269 Ga0500642_0012144 3300053130 Bacteria 3112
270 Ga0500642_0012633 3300053130 Bacteria 3072
271 Ga0500577_0000005 3300053142 Bacteria 158177
272 Ga0500616_0003915 3300053153 Bacteria 10943
273 Ga0501084_0027860 3300054114 Bacteria 4721
274 Ga0501084_0046431 3300054114 Bacteria 3638
275 Ga0501082_0059453 3300060353 Bacteria 3293
276 Ga0501082_0066953 3300060353 Bacteria 3092
277 2688069769 2687453257 Bacteria 6784659
278 2889416792 2889415604 Bacteria 8048700
279 2920110074 2920107658 Bacteria 10042636
280 JGI24751J29686_10000155
281 JGI24746J21847_1000203
282 JGI25406J46586_10005185
283 Ga0070658_10042759
284 Ga0070676_10000001
285 Ga0070683_100014423
286 Ga0070683_100015378
287 Ga0070670_100012990
288 Ga0070661_100001731
289 Ga0070703_10000006
290 Ga0070703_10002367
291 Ga0070714_100074622
292 Ga0070713_100003528
293 Ga0070713_100008912
294 Ga0070705_100002520
295 Ga0070700_100012521
296 Ga0070694_100025034
297 Ga0070708_100000132
298 Ga0070708_100001387
299 Ga0070708_100165177
300 Ga0070663_100062925
301 Ga0068867_100001002
302 Ga0070706_100000056
303 Ga0070706_100000368
304 Ga0070706_100000394
305 Ga0070706_100000908
306 Ga0070706_100001533
307 Ga0070706_100176179
308 Ga0070707_100003598
309 Ga0070707_100013137
310 Ga0070707_100013946
311 Ga0070707_100019930
312 Ga0070707_100045556
313 Ga0070707_100092948
314 Ga0070698_100001321
315 Ga0070698_100044782
316 Ga0070698_100049617
317 Ga0070699_100000133
318 Ga0070699_100000331
319 Ga0070699_100018827
320 Ga0070699_100023633
321 Ga0070699_100057080
322 Ga0070684_100000628
323 Ga0070684_100009418
324 Ga0070697_100004217
325 Ga0070697_100040056
326 Ga0070696_100050807
327 Ga0070704_100000379
328 Ga0070664_100001207
329 Ga0070664_100041389
330 Ga0068857_100000754
331 Ga0068866_10000840
332 Ga0068866_10015084
333 Ga0068870_10000411
334 Ga0068863_100031866
335 Ga0068860_100016045
336 Ga0068862_100033091
337 Ga0081455_10006723
338 Ga0081455_10011251
339 Ga0081455_10011807
340 Ga0081455_10013868
341 Ga0081539_10000712
342 Ga0081539_10001670
343 Ga0075432_10002699
344 Ga0075362_10000067
345 Ga0075428_100018761
346 Ga0075428_100111746
347 Ga0075430_100000310
348 Ga0075431_100000250
349 Ga0075431_100077276
350 Ga0075433_10002720
351 Ga0075434_100072719
352 Ga0075429_100000383
353 Ga0068865_100019243
354 Ga0111539_10000517
355 Ga0111539_10023794
356 Ga0111539_10027802
357 Ga0111539_10035910
358 Ga0111539_10082062
359 Ga0105245_10044911
360 Ga0114129_10002418
361 Ga0114129_10005378
362 Ga0114129_10009628
363 Ga0114129_10037916
364 Ga0114129_10089303
365 Ga0105243_10000081
366 Ga0105242_10006084
367 Ga0105239_10087228
368 Ga0157378_10005898
369 Ga0163162_10032527
370 Ga0157376_10004877
371 Ga0213872_10016839
372 Ga0213876_10000340
373 Ga0224712_10006577
374 Ga0207653_10000301
375 Ga0207647_10059406
376 Ga0207645_10064202
377 Ga0207643_10000065
378 Ga0207684_10000005
379 Ga0207684_10000166
380 Ga0207684_10000466
381 Ga0207684_10000803
382 Ga0207695_10033938
383 Ga0207662_10017062
384 Ga0207649_10003111
385 Ga0207646_10000120
386 Ga0207646_10003243
387 Ga0207646_10005001
388 Ga0207646_10050459
389 Ga0207650_10007271
390 Ga0207650_10024400
391 Ga0207687_10025941
392 Ga0207700_10007742
393 Ga0207700_10021109
394 Ga0207709_10000090
395 Ga0207691_10164906
396 Ga0207661_10000936
397 Ga0207661_10090211
398 Ga0207679_10006869
399 Ga0207679_10027918
400 Ga0207712_10012682
401 Ga0207640_10051789
402 Ga0207678_10141237
403 Ga0207708_10022560
404 Ga0207648_10000553
405 Ga0207676_10000638
406 Ga0207674_10000316
407 Ga0207674_10001645
408 Ga0207428_10006369
409 Ga0207428_10010245
410 Ga0207428_10015317
411 Ga0265319_1003946
412 Ga0265334_10002030
413 Ga0265318_10002833
414 Ga0265338_10021546
415 Ga0265338_10074380
416 Ga0265339_10031447
417 Ga0307513_10000742
418 Ga0307408_100000052
419 Ga0316575_10012670
420 Ga0265314_10008932
421 Ga0307413_10008420
422 Ga0307410_10002130
423 Ga0307412_10000035
424 Ga0307411_10033769
425 Ga0373937_0040604
426 Ga0373925_0000183
427 Ga0395899_0003932
428 Ga0395900_0000671
429 Ga0395905_0000093
430 Ga0395905_0001844
431 Ga0395905_0254632
432 Ga0436364_1446484
433 Ga0436364_1526475
434 Ga0395901_0002381
435 Ga0395901_0017631
436 Ga0395901_0025009
437 Ga0436365_0170146
438 Ga0436365_1508062
439 Ga0436360_0213145
440 Ga0436360_0853228
441 Ga0436360_1056455
442 Ga0436361_0292998
443 Ga0436361_0844892
444 Ga0436363_0653673
445 Ga0436362_0646389
446 Ga0439453_0001904
447 Ga0439463_011005
448 Ga0450890_000005
449 Ga0450893_0000536
450 Ga0450893_0001815
451 Ga0451577_0000064
452 Ga0453683_0005558
453 Ga0453683_0013154
454 Ga0453684_0000061
455 Ga0453684_0001259
456 Ga0453684_0001645
457 Ga0453684_0009959
458 Ga0453684_0195813
459 Ga0451576_0000850
460 Ga0451576_0004846
461 Ga0466967_0000865
462 Ga0495603_0001869
463 Ga0495603_0027588
464 Ga0495629_0000005
465 Ga0495584_0034271
466 Ga0495585_0009426
467 Ga0495637_0025546
468 Ga0495644_0027727
469 Ga0495663_0021519
470 Ga0495586_0000307
471 Ga0495622_0003546
472 Ga0495656_0008736
473 Ga0495635_0000647
474 Ga0495658_0017425
475 Ga0495613_0004202
476 Ga0495670_0005422
477 Ga0495581_0013806
478 Ga0495680_0000860
479 Ga0495684_0005949
480 Ga0495684_0076203
481 Ga0495602_0022499
482 Ga0496106_0005477
483 Ga0496107_0023666
484 Ga0496111_0019730
485 Ga0496112_0002286
486 Ga0501031_0048774
487 Ga0501032_0003636
488 Ga0501033_0026877
489 Ga0501033_0032019
490 Ga0501034_0000450
491 Ga0501034_0007394
492 Ga0501034_0016223
493 Ga0501036_0037658
494 Ga0501037_0072454
495 Ga0501039_0048083
496 Ga0501040_0026992
497 Ga0501041_0027244
498 Ga0501042_0040064
499 Ga0501042_0059231
500 Ga0501043_0080022
501 Ga0501047_0006319
502 Ga0501047_0023486
503 Ga0501047_0040220
504 Ga0501068_0020371
505 Ga0501069_0001303
506 Ga0501070_0095722
507 Ga0501071_0042810
508 Ga0501072_0016498
509 Ga0501073_0004158
510 Ga0501073_0028254
511 Ga0501074_0036303
512 Ga0501075_0046595
513 Ga0501076_0028864
514 Ga0501077_0020552
515 Ga0501077_0081217
516 Ga0501079_0033114
517 Ga0501080_0063911
518 Ga0501081_0038854
519 Ga0501083_0001619
520 Ga0501035_0016916
521 Ga0501044_0000362
522 Ga0501044_0009775
523 Ga0501044_0018288
524 Ga0501044_0032906
525 Ga0501045_0012245
526 Ga0501045_0027393
527 nmdc:mga03683_199_c1
528 nmdc:mga03n38_10047_c1
529 nmdc:mga0k408_900_c1
530 nmdc:mga05p37_1881_c2
531 nmdc:mga05p37_40310_c1
532 nmdc:mga05p37_4561_c1
533 nmdc:mga0qj67_28783_c1
534 nmdc:mga08y16_13362_c1
535 nmdc:mga08y16_40037_c1
536 nmdc:mga08y16_56803_c1
537 nmdc:mga08y16_772_c1
538 nmdc:mga08y16_78020_c1
539 nmdc:mga0a205_26_c2
540 nmdc:mga0a205_4192_c1
541 nmdc:mga0a205_57764_c1
542 Ga0500644_0000001
543 Ga0500566_0000033
544 Ga0500641_0000712
545 Ga0500650_0000219
546 Ga0500555_000044
547 Ga0500556_0000010
548 Ga0500642_0012144
549 Ga0500642_0012633
550 Ga0500577_0000005
551 Ga0500616_0003915
552 Ga0501084_0027860
553 Ga0501084_0046431
554 Ga0501082_0059453
555 Ga0501082_0066953
556 2688069769
557 2889416792
558 2920110074

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00152

tRNA-synt_2

tRNA synthetases class II (D, K and N)

120

552

0.99

PF01336

tRNA_anti-codon

OB-fold nucleic acid binding domain

18

103

0.97

PF02938

GAD

GAD domain

311

404

0.97

PF01243

Putative_PNPOx

Pyridoxamine 5'-phosphate oxidase

588

674

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
5gro-assembly1.cif.gz_B crystal structure of the n-terminal anticodon-binding domain of non-discriminating aspartyl-trna synthetase from helicobacter pylori 0.9532 2 106
6hhx-assembly1.cif.gz_B structure of t. thermophilus asprs in complex with 5'-o-(n-(l-aspartyl)-sulfamoyl)cytidine 0.949 2 588
6sjc-assembly1.cif.gz_A structure of t. thermophilus asprs in complex with 5'-o-(n-(l-aspartyl)-sulfamoyl)adenosine 0.9489 2 585
6wom-assembly1.cif.gz_B crystal structure of aspartyl-trna ligase from elizabethkingia sp. 0.9462 2 587
6hhx-assembly1.cif.gz_A structure of t. thermophilus asprs in complex with 5'-o-(n-(l-aspartyl)-sulfamoyl)cytidine 0.9451 2 585
ID Description Score Start End Superfamily
af_I1K5N2_70_181_2.40.50.140 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9818 1 106 2.40.50.140
4o2dB01 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9805 2 107 2.40.50.140
1c0aA01 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9795 1 107 2.40.50.140
1c0aA01 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9705 1 107 2.40.50.140
1l0wB01 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);Nucleic acid-binding proteins 0.9611 1 109 2.40.50.140
ID Description Score Start End GO Terms
AF-A0A7C1MRS0-F1-model_v4 OB domain-containing protein 0.9896 1 99 GO:0003676
GO:0004815
GO:0005524
GO:0006422
AF-A0A4Q2XUE9-F1-model_v4 Aspartate--tRNA ligase 0.987 1 140 GO:0003676
GO:0004815
GO:0005524
GO:0006422
AF-A0A536LPS0-F1-model_v4 Aspartate--tRNA ligase 0.9867 4 99 GO:0003676
GO:0004815
GO:0005524
GO:0006422
AF-A0A355B626-F1-model_v4 OB domain-containing protein 0.9854 2 94 GO:0003676
GO:0004815
GO:0005524
GO:0006422
AF-X0WZ57-F1-model_v4 OB domain-containing protein 0.9851 2 90 GO:0003676
GO:0004815
GO:0005524
GO:0006422

Map