F382752

General Info

Members Datasets Scaffolds Average Seq Length
278 174 556 255

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|3003665799|3003669668
Length 305
Sequence IFVREADGAMISSASLPSSRVPSSVGRGVPPPDTAMTRRSTQPVGPGILAVEGLTLAFGGTTALEAVDLTVAAGEIHAVIGPNGAGKSSLINAISGLHAPQSGRVRIGETTFFSVPAGRLAALGVARTFQNLALFDGLSVFDNVLSGLAGAQRAGLAAQMLGLPQARREEQAHRARAAEVIARLDIAEVADRPVATLPFGVQKRVELARALVARPRLLLLDEPMAGMTATEKVQMSRFILEARESLGTSVVLIEHDIGVVMRLSDRVTVLDHGRRIAQGTPAEVQADPAVAAAYLGLDDREGEAA

Samples

Sample ID Description Type Environment
1 3300005288 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 2: eDNA_1 v2 (version 2) Metagenome Rhizosphere
2 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
3 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
4 3300005327 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
8 3300005341 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG Metagenome Rhizosphere
9 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
10 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
11 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
12 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
13 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
14 3300005436 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG Metagenome Rhizosphere
15 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
16 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
17 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
18 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
19 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
20 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
21 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
22 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
23 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
24 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
25 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
26 3300005545 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG Metagenome Rhizosphere
27 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
28 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
29 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
30 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
31 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
32 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
33 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
34 3300006028 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG Metagenome Rhizosphere
35 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
36 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
37 3300006163 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG Metagenome Rhizosphere
38 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
39 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
40 3300006186 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 Metagenome Endosphere
41 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
42 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
43 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
44 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
45 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
46 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
47 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
48 3300007788 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 Metagenome Rhizosphere
49 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
50 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
51 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
52 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
53 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
54 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
55 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
56 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
57 3300013105 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG Metagenome Rhizosphere
58 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
59 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
60 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025909 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025916 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
83 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
84 3300028794 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 17_EM Metagenome Unclassified
85 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
86 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
87 3300035172 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_3 Metagenome Rhizosphere
88 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
89 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
90 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
91 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
92 3300039453 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R3 v2 Metagenome Rhizosphere
93 3300041452 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_4 MetaG Metagenome Rhizoplane
94 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
95 3300044712 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Rhiz_9IH_GED Metagenome Rhizosphere
96 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
97 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
98 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
99 3300046459 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL3_88_32 rhizosphere Metagenome Rhizosphere
100 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
101 3300046473 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL3_85_26 rhizosphere Metagenome Rhizosphere
102 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
103 3300046492 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co3_21_57 rhizosphere Metagenome Rhizosphere
104 3300046499 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-234-CL1_24_28 rhizosphere Metagenome Rhizosphere
105 3300046501 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-307-Co3_27_41 rhizosphere Metagenome Rhizosphere
106 3300046523 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 rhizosphere Metagenome Rhizosphere
107 3300046537 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-234-Co3_21_62 rhizosphere Metagenome Rhizosphere
108 3300046539 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co3_13_34 rhizosphere Metagenome Rhizosphere
109 3300046558 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-56-Co3_6_53 rhizosphere Metagenome Rhizosphere
110 3300046615 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co3_27_48 rhizosphere Metagenome Rhizosphere
111 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
112 3300046648 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-331-Co3_15_40 rhizosphere Metagenome Rhizosphere
113 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
114 3300046681 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-847-CL3_83_27 rhizosphere Metagenome Rhizosphere
115 3300046683 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL3_91_3 rhizosphere Metagenome Rhizosphere
116 3300046684 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co2_44_8 rhizosphere Metagenome Rhizosphere
117 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
118 3300046691 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 rhizosphere Metagenome Rhizosphere
119 3300046692 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-7986-Co1_37_5 rhizosphere Metagenome Rhizosphere
120 3300046794 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co1_27_3 rhizosphere Metagenome Rhizosphere
121 3300047318 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co1_6_4 rhizosphere Metagenome Rhizosphere
122 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
123 3300047673 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL3_81_33 rhizosphere Metagenome Rhizosphere
124 3300048089 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL3_84_27 rhizosphere Metagenome Rhizosphere
125 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
126 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
127 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
128 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
129 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
130 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
131 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
132 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
133 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
134 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
135 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
136 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
138 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
140 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
141 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
142 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
143 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
144 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
145 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
146 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
147 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
148 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
149 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
150 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
151 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
152 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
153 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
154 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
155 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
156 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
157 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
158 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
159 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
160 3300050516 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-4 re-annotation Metagenome Endosphere
161 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
162 3300053104 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 endosphere Metagenome Endosphere
163 3300053108 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 endosphere Metagenome Endosphere
164 3300053117 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 endosphere Metagenome Endosphere
165 3300053136 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 endosphere Metagenome Endosphere
166 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
167 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
168 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
169 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
170 2595698237 Methylobacterium sp. UNCCL125 Isolate Unclassified
171 2599185301 Mesorhizobium sp. NFR06 Isolate Rhizoplane
172 2874123672 Mesorhizobium sp. M00.F.Ca.ET.216.01.1.1 Isolate Nodule
173 2874168670 Mesorhizobium kowhaii Ach-343 Isolate Nodule
174 2881412998 Achromobacter aloeverae AVA-1 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.84
Metatranscriptomes 0
Isolates 2.16

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 3.6
Nodule 0.72
Rhizoplane 1.8
Rhizosphere 91.37
Stem 0
Stem Tuber 0
Unclassified 0

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0065714_10070890 3300005288 Bacteria 3735
2 Ga0065704_10070546 3300005289 Bacteria 20997
3 Ga0065707_10263463 3300005295 Bacteria 1091
4 Ga0070658_10093647 3300005327 Bacteria 2478
5 Ga0070658_10148494 3300005327 Bacteria 1961
6 Ga0070683_100000933 3300005329 Bacteria 21733
7 Ga0070683_100103796 3300005329 Bacteria 2679
8 Ga0070683_100188622 3300005329 Bacteria 1957
9 Ga0070670_100197490 3300005331 Bacteria 1748
10 Ga0068869_100070511 3300005334 Bacteria 2586
11 Ga0070691_10004970 3300005341 Bacteria 6050
12 Ga0070668_100489801 3300005347 Bacteria 1063
13 Ga0070669_100009046 3300005353 Bacteria 7102
14 Ga0070674_100017002 3300005356 Bacteria 4567
15 Ga0070709_10034695 3300005434 Bacteria 3060
16 Ga0070709_10081690 3300005434 Bacteria 2110
17 Ga0070714_100023438 3300005435 Bacteria 5071
18 Ga0070714_100058934 3300005435 Bacteria 3291
19 Ga0070714_100544499 3300005435 Bacteria 1110
20 Ga0070713_100004201 3300005436 Bacteria 9613
21 Ga0070713_100279943 3300005436 Bacteria 1530
22 Ga0070710_10016034 3300005437 Bacteria 3804
23 Ga0070710_10084701 3300005437 Bacteria 1858
24 Ga0070711_100047229 3300005439 Bacteria 2938
25 Ga0070711_100058832 3300005439 Bacteria 2666
26 Ga0070708_100764246 3300005445 Bacteria 909
27 Ga0070681_10048186 3300005458 Bacteria 4258
28 Ga0068867_100372893 3300005459 Bacteria 1197
29 Ga0070707_100430544 3300005468 Bacteria 1280
30 Ga0070698_100004264 3300005471 Bacteria 15720
31 Ga0070698_100174002 3300005471 Bacteria 2093
32 Ga0070698_100363655 3300005471 Bacteria 1379
33 Ga0070699_100080550 3300005518 Bacteria 2838
34 Ga0070679_100067529 3300005530 Bacteria 3565
35 Ga0070684_100000476 3300005535 Bacteria 27437
36 Ga0070684_100056954 3300005535 Bacteria 3412
37 Ga0070684_100094846 3300005535 Bacteria 2658
38 Ga0070672_100045642 3300005543 Bacteria 3391
39 Ga0070695_100029147 3300005545 Bacteria 3428
40 Ga0070664_100050095 3300005564 Bacteria 3534
41 Ga0070664_100050778 3300005564 Bacteria 3511
42 Ga0068857_100000827 3300005577 Bacteria 23160
43 Ga0068856_100005224 3300005614 Bacteria 12811
44 Ga0068861_100105634 3300005719 Bacteria 2249
45 Ga0068863_100439613 3300005841 Bacteria 1279
46 Ga0068860_100027403 3300005843 Bacteria 5489
47 Ga0081455_10005758 3300005937 Bacteria 13512
48 Ga0081455_10338855 3300005937 Bacteria 1065
49 Ga0070717_10017667 3300006028 Bacteria 5554
50 Ga0070717_10620630 3300006028 Bacteria 981
51 Ga0075365_10018327 3300006038 Bacteria 4303
52 Ga0075432_10044876 3300006058 Bacteria 1550
53 Ga0070715_10038178 3300006163 Bacteria 1992
54 Ga0070716_100142476 3300006173 Bacteria 1530
55 Ga0070712_100203152 3300006175 Bacteria 1558
56 Ga0075369_10145965 3300006186 Bacteria 1080
57 Ga0075366_10092343 3300006195 Bacteria 1814
58 Ga0075428_100000686 3300006844 Bacteria 34847
59 Ga0075428_100015868 3300006844 Bacteria 8337
60 Ga0075428_100024377 3300006844 Bacteria 6695
61 Ga0075430_100000130 3300006846 Bacteria 47678
62 Ga0075430_100022285 3300006846 Bacteria 5388
63 Ga0075430_100022462 3300006846 Bacteria 5369
64 Ga0075430_100073967 3300006846 Bacteria 2856
65 Ga0075430_100127501 3300006846 Bacteria 2122
66 Ga0075431_100000330 3300006847 Bacteria 37548
67 Ga0075431_100003907 3300006847 Bacteria 14506
68 Ga0075431_100005773 3300006847 Bacteria 12242
69 Ga0075431_100005868 3300006847 Bacteria 12154
70 Ga0075431_100122641 3300006847 Bacteria 2681
71 Ga0075433_10037298 3300006852 Bacteria 4193
72 Ga0075434_100083420 3300006871 Bacteria 3193
73 Ga0075434_100134120 3300006871 Bacteria 2496
74 Ga0075429_100007191 3300006880 Bacteria 9658
75 Ga0075429_100009627 3300006880 Bacteria 8383
76 Ga0075429_100035387 3300006880 Bacteria 4343
77 Ga0075429_100036325 3300006880 Bacteria 4285
78 Ga0075429_100327016 3300006880 Bacteria 1342
79 Ga0075429_100552525 3300006880 Bacteria 1009
80 Ga0099795_10082066 3300007788 Bacteria 1235
81 Ga0111539_10011088 3300009094 Bacteria 11341
82 Ga0111539_10023526 3300009094 Bacteria 7569
83 Ga0105245_10059067 3300009098 Bacteria 3453
84 Ga0114129_10008761 3300009147 Bacteria 14429
85 Ga0114129_10012736 3300009147 Bacteria 11972
86 Ga0114129_10015722 3300009147 Bacteria 10760
87 Ga0114129_10087014 3300009147 Bacteria 4333
88 Ga0114129_10100021 3300009147 Bacteria 4012
89 Ga0114129_10483384 3300009147 Bacteria 1620
90 Ga0105243_10224192 3300009148 Bacteria 1663
91 Ga0105242_10316355 3300009176 Bacteria 1430
92 Ga0105237_10143709 3300009545 Bacteria 2380
93 Ga0105246_10032272 3300011119 Bacteria 3472
94 Ga0157373_10126578 3300013100 Bacteria 1797
95 Ga0157373_10395334 3300013100 Bacteria 990
96 Ga0157369_10017912 3300013105 Bacteria 7951
97 Ga0163162_10005621 3300013306 Bacteria 12115
98 Ga0157372_10278876 3300013307 Bacteria 1943
99 Ga0207692_10053993 3300025898 Bacteria 2049
100 Ga0207692_10158598 3300025898 Bacteria 1302
101 Ga0207705_10002667 3300025909 Bacteria 13674
102 Ga0207705_10123743 3300025909 Bacteria 1921
103 Ga0207707_10361194 3300025912 Bacteria 1250
104 Ga0207693_10011834 3300025915 Bacteria 7052
105 Ga0207693_10095122 3300025915 Bacteria 2335
106 Ga0207693_10165607 3300025915 Bacteria 1740
107 Ga0207663_10027341 3300025916 Bacteria 3323
108 Ga0207687_10038894 3300025927 Bacteria 3253
109 Ga0207700_10000561 3300025928 Bacteria 21827
110 Ga0207700_10085075 3300025928 Bacteria 2481
111 Ga0207700_10204417 3300025928 Bacteria 1666
112 Ga0207700_10240233 3300025928 Bacteria 1544
113 Ga0207644_10255744 3300025931 Bacteria 1399
114 Ga0207706_10015026 3300025933 Bacteria 7009
115 Ga0207706_10660456 3300025933 Bacteria 895
116 Ga0207704_10194891 3300025938 Bacteria 1477
117 Ga0207665_10079354 3300025939 Bacteria 2256
118 Ga0207691_10100817 3300025940 Bacteria 2577
119 Ga0207661_10005649 3300025944 Bacteria 8825
120 Ga0207661_10018567 3300025944 Bacteria 5168
121 Ga0207661_10074718 3300025944 Bacteria 2779
122 Ga0207661_10096649 3300025944 Bacteria 2472
123 Ga0207679_10007779 3300025945 Bacteria 6811
124 Ga0207712_10352316 3300025961 Bacteria 1224
125 Ga0207658_10039715 3300025986 Bacteria 3397
126 Ga0207702_10002842 3300026078 Bacteria 16188
127 Ga0207641_10354427 3300026088 Bacteria 1399
128 Ga0207674_10000172 3300026116 Bacteria 78347
129 Ga0207675_100013355 3300026118 Bacteria 7663
130 Ga0209971_1019864 3300027682 Bacteria 1596
131 Ga0209974_10009127 3300027876 Bacteria 3369
132 Ga0207428_10005206 3300027907 Bacteria 12159
133 Ga0207428_10009331 3300027907 Bacteria 8801
134 Ga0207428_10010166 3300027907 Bacteria 8414
135 Ga0265323_10030391 3300028653 Bacteria 2013
136 Ga0307515_10123305 3300028794 Bacteria 2916
137 Ga0307416_100886480 3300032002 Bacteria 992
138 Ga0373956_0010218 3300035119 Bacteria 3840
139 Ga0373955_0146597 3300035172 Bacteria 1387
140 Ga0316574_0020921 3300035398 Bacteria 3878
141 Ga0316574_0341102 3300035398 Bacteria 949
142 Ga0373937_0094712 3300036401 Bacteria 2769
143 Ga0373937_0255776 3300036401 Bacteria 1651
144 Ga0373925_0341523 3300037068 Bacteria 1215
145 Ga0436364_0281867 3300037853 Bacteria 17145
146 Ga0436362_0393043 3300039453 Bacteria 1091
147 Ga0451793_1535963 3300041452 Bacteria 1295
148 Ga0451577_0006616 3300042876 Bacteria 11514
149 Ga0451577_0402783 3300042876 Bacteria 1242
150 Ga0453684_0000095 3300044712 Bacteria 378681
151 Ga0453684_0000728 3300044712 Bacteria 115658
152 Ga0466960_0004096 3300044901 Bacteria 5667
153 Ga0466960_0236643 3300044901 Bacteria 1010
154 Ga0451576_0139109 3300045051 Bacteria 2532
155 Ga0495603_0021488 3300046455 Bacteria 3908
156 Ga0495629_0003581 3300046459 Bacteria 11735
157 Ga0495638_0011438 3300046460 Bacteria 6114
158 Ga0495582_0036841 3300046473 Bacteria 2691
159 Ga0495584_0014821 3300046491 Bacteria 3973
160 Ga0495585_0003845 3300046492 Bacteria 9989
161 Ga0495594_0066795 3300046499 Bacteria 1995
162 Ga0495607_0013439 3300046501 Bacteria 5364
163 Ga0495644_0000584 3300046523 Bacteria 15299
164 Ga0495598_0003290 3300046537 Bacteria 3417
165 Ga0495598_0006199 3300046537 Bacteria 2691
166 Ga0495621_0039057 3300046539 Bacteria 1659
167 Ga0495633_0006366 3300046558 Bacteria 7011
168 Ga0495656_0000936 3300046615 Bacteria 9444
169 Ga0495634_0260260 3300046642 Bacteria 1059
170 Ga0495611_0008091 3300046648 Bacteria 4463
171 Ga0495659_0001209 3300046664 Bacteria 8964
172 Ga0495659_0091239 3300046664 Bacteria 1170
173 Ga0495659_0139732 3300046664 Bacteria 966
174 Ga0495647_0039466 3300046681 Bacteria 1790
175 Ga0495658_0012052 3300046683 Bacteria 4366
176 Ga0495669_0008623 3300046684 Bacteria 4290
177 Ga0495613_0047214 3300046689 Bacteria 3181
178 Ga0495670_0000588 3300046691 Bacteria 17348
179 Ga0495671_0066268 3300046692 Bacteria 1777
180 Ga0495589_0292748 3300046794 Bacteria 755
181 Ga0495636_0081232 3300047318 Bacteria 1396
182 Ga0495674_0046781 3300047319 Bacteria 3840
183 Ga0495593_0028549 3300047673 Bacteria 3064
184 Ga0495614_0059811 3300048089 Bacteria 1637
185 Ga0496108_0351176 3300048911 Bacteria 1287
186 Ga0496110_0173040 3300048913 Bacteria 1959
187 Ga0496112_0022071 3300048915 Bacteria 6062
188 Ga0496126_0014595 3300048929 Bacteria 7935
189 Ga0496126_0288851 3300048929 Bacteria 1357
190 Ga0501036_0029087 3300049572 Bacteria 4671
191 Ga0501037_0180439 3300049573 Bacteria 1498
192 Ga0501038_0123256 3300049574 Bacteria 2135
193 Ga0501039_0095619 3300049575 Bacteria 2316
194 Ga0501041_0107125 3300049577 Bacteria 1732
195 Ga0501042_0098734 3300049578 Bacteria 2099
196 Ga0501043_0451081 3300049579 Bacteria 966
197 Ga0501046_0106153 3300049580 Bacteria 2150
198 Ga0501046_0160925 3300049580 Bacteria 1688
199 Ga0501047_0190903 3300049581 Bacteria 1912
200 Ga0501048_0301813 3300049582 Bacteria 1139
201 Ga0501068_0378769 3300049584 Bacteria 911
202 Ga0501070_0025102 3300049586 Bacteria 4997
203 Ga0501070_0606488 3300049586 Bacteria 872
204 Ga0501071_0081643 3300049587 Bacteria 2366
205 Ga0501071_0108958 3300049587 Bacteria 2046
206 Ga0501071_0280821 3300049587 Bacteria 1260
207 Ga0501072_0009500 3300049588 Bacteria 7395
208 Ga0501072_0012547 3300049588 Bacteria 6479
209 Ga0501072_0720445 3300049588 Bacteria 783
210 Ga0501074_0077253 3300049590 Bacteria 2390
211 Ga0501075_0013081 3300049591 Bacteria 5915
212 Ga0501075_0021136 3300049591 Bacteria 4741
213 Ga0501075_0063065 3300049591 Bacteria 2794
214 Ga0501076_0033267 3300049592 Bacteria 4026
215 Ga0501076_0086604 3300049592 Bacteria 2518
216 Ga0501076_0194081 3300049592 Bacteria 1657
217 Ga0501076_0229302 3300049592 Bacteria 1518
218 Ga0501077_0004301 3300049593 Bacteria 8621
219 Ga0501077_0007309 3300049593 Bacteria 6817
220 Ga0501079_0004301 3300049741 Bacteria 10569
221 Ga0501079_0241092 3300049741 Bacteria 1412
222 Ga0501079_0261272 3300049741 Bacteria 1353
223 Ga0501080_0107826 3300049742 Bacteria 2581
224 Ga0501080_0273746 3300049742 Bacteria 1536
225 Ga0501081_0001332 3300049743 Bacteria 15068
226 Ga0501081_0002541 3300049743 Bacteria 11498
227 Ga0501083_0138315 3300049744 Bacteria 1595
228 Ga0501035_0099292 3300049822 Bacteria 2555
229 nmdc:mga0yw44_3358_c1 3300050492 Bacteria 7093
230 nmdc:mga05p37_169743_c1 3300050507 Bacteria 2661
231 nmdc:mga05p37_192811_c1 3300050507 Bacteria 2473
232 nmdc:mga05p37_73072_c1 3300050507 Bacteria 4221
233 nmdc:mga05p37_8121_c1 3300050507 Bacteria 12404
234 nmdc:mga05p37_9882_c1 3300050507 Bacteria 11321
235 nmdc:mga09592_129855_c1 3300050508 Bacteria 2167
236 nmdc:mga09592_28480_c1 3300050508 Bacteria 4641
237 nmdc:mga09592_35766_c1 3300050508 Bacteria 4159
238 nmdc:mga09592_420_c1 3300050508 Bacteria 31188
239 nmdc:mga0qj67_11216_c1 3300050509 Bacteria 6712
240 nmdc:mga0qj67_148803_c1 3300050509 Bacteria 1899
241 nmdc:mga0qj67_21745_c1 3300050509 Bacteria 4922
242 nmdc:mga0qj67_3164_c1 3300050509 Bacteria 11853
243 nmdc:mga0qj67_71691_c1 3300050509 Bacteria 2765
244 nmdc:mga06r32_11378_c1 3300050510 Bacteria 8014
245 nmdc:mga06r32_1954_c1 3300050510 Bacteria 18381
246 nmdc:mga06r32_228305_c1 3300050510 Bacteria 1850
247 nmdc:mga06r32_4440_c1 3300050510 Bacteria 12558
248 nmdc:mga06r32_7784_c1 3300050510 Bacteria 9633
249 nmdc:mga08y16_12036_c1 3300050511 Bacteria 9090
250 nmdc:mga08y16_5561_c1 3300050511 Bacteria 13196
251 nmdc:mga08y16_6714_c1 3300050511 Bacteria 12061
252 nmdc:mga0n895_182051_c1 3300050512 Bacteria 2133
253 nmdc:mga0n895_60548_c1 3300050512 Bacteria 3736
254 nmdc:mga0a205_4986_c1 3300050515 Bacteria 11944
255 nmdc:mga0sz30_12810_c1 3300050516 Bacteria 2832
256 nmdc:mga0sz30_6099_c3 3300050516 Bacteria 2811
257 Ga0495619_0002074 3300053085 Bacteria 13325
258 Ga0495619_0042446 3300053085 Bacteria 2979
259 Ga0500556_0000426 3300053104 Bacteria 30343
260 Ga0500562_000183 3300053108 Bacteria 16987
261 Ga0500593_001014 3300053117 Bacteria 10204
262 Ga0500559_0000050 3300053136 Bacteria 93262
263 Ga0501084_0001846 3300054114 Bacteria 16897
264 Ga0501084_0003520 3300054114 Bacteria 12714
265 Ga0501084_0258498 3300054114 Bacteria 1470
266 Ga0501084_0304536 3300054114 Bacteria 1346
267 Ga0501084_0372063 3300054114 Bacteria 1207
268 Ga0501082_0011213 3300060353 Bacteria 7702
269 Ga0501082_0012412 3300060353 Bacteria 7322
270 Ga0501082_0409353 3300060353 Bacteria 1184
271 Ga0530510_0008251 3300061734 Bacteria 7265
272 Ga0530510_0112607 3300061734 Bacteria 1994
273 3003669668 3003665799 Bacteria 7279786
274 2596373110 2595698237 Bacteria 6712432
275 2599939464 2599185301 Bacteria 6161860
276 2874127222 2874123672 Bacteria 7238285
277 2874170094 2874168670 Bacteria 8062617
278 2881415961 2881412998 Bacteria 6492157
279 Ga0065714_10070890
280 Ga0065704_10070546
281 Ga0065707_10263463
282 Ga0070658_10093647
283 Ga0070658_10148494
284 Ga0070683_100000933
285 Ga0070683_100103796
286 Ga0070683_100188622
287 Ga0070670_100197490
288 Ga0068869_100070511
289 Ga0070691_10004970
290 Ga0070668_100489801
291 Ga0070669_100009046
292 Ga0070674_100017002
293 Ga0070709_10034695
294 Ga0070709_10081690
295 Ga0070714_100023438
296 Ga0070714_100058934
297 Ga0070714_100544499
298 Ga0070713_100004201
299 Ga0070713_100279943
300 Ga0070710_10016034
301 Ga0070710_10084701
302 Ga0070711_100047229
303 Ga0070711_100058832
304 Ga0070708_100764246
305 Ga0070681_10048186
306 Ga0068867_100372893
307 Ga0070707_100430544
308 Ga0070698_100004264
309 Ga0070698_100174002
310 Ga0070698_100363655
311 Ga0070699_100080550
312 Ga0070679_100067529
313 Ga0070684_100000476
314 Ga0070684_100056954
315 Ga0070684_100094846
316 Ga0070672_100045642
317 Ga0070695_100029147
318 Ga0070664_100050095
319 Ga0070664_100050778
320 Ga0068857_100000827
321 Ga0068856_100005224
322 Ga0068861_100105634
323 Ga0068863_100439613
324 Ga0068860_100027403
325 Ga0081455_10005758
326 Ga0081455_10338855
327 Ga0070717_10017667
328 Ga0070717_10620630
329 Ga0075365_10018327
330 Ga0075432_10044876
331 Ga0070715_10038178
332 Ga0070716_100142476
333 Ga0070712_100203152
334 Ga0075369_10145965
335 Ga0075366_10092343
336 Ga0075428_100000686
337 Ga0075428_100015868
338 Ga0075428_100024377
339 Ga0075430_100000130
340 Ga0075430_100022285
341 Ga0075430_100022462
342 Ga0075430_100073967
343 Ga0075430_100127501
344 Ga0075431_100000330
345 Ga0075431_100003907
346 Ga0075431_100005773
347 Ga0075431_100005868
348 Ga0075431_100122641
349 Ga0075433_10037298
350 Ga0075434_100083420
351 Ga0075434_100134120
352 Ga0075429_100007191
353 Ga0075429_100009627
354 Ga0075429_100035387
355 Ga0075429_100036325
356 Ga0075429_100327016
357 Ga0075429_100552525
358 Ga0099795_10082066
359 Ga0111539_10011088
360 Ga0111539_10023526
361 Ga0105245_10059067
362 Ga0114129_10008761
363 Ga0114129_10012736
364 Ga0114129_10015722
365 Ga0114129_10087014
366 Ga0114129_10100021
367 Ga0114129_10483384
368 Ga0105243_10224192
369 Ga0105242_10316355
370 Ga0105237_10143709
371 Ga0105246_10032272
372 Ga0157373_10126578
373 Ga0157373_10395334
374 Ga0157369_10017912
375 Ga0163162_10005621
376 Ga0157372_10278876
377 Ga0207692_10053993
378 Ga0207692_10158598
379 Ga0207705_10002667
380 Ga0207705_10123743
381 Ga0207707_10361194
382 Ga0207693_10011834
383 Ga0207693_10095122
384 Ga0207693_10165607
385 Ga0207663_10027341
386 Ga0207687_10038894
387 Ga0207700_10000561
388 Ga0207700_10085075
389 Ga0207700_10204417
390 Ga0207700_10240233
391 Ga0207644_10255744
392 Ga0207706_10015026
393 Ga0207706_10660456
394 Ga0207704_10194891
395 Ga0207665_10079354
396 Ga0207691_10100817
397 Ga0207661_10005649
398 Ga0207661_10018567
399 Ga0207661_10074718
400 Ga0207661_10096649
401 Ga0207679_10007779
402 Ga0207712_10352316
403 Ga0207658_10039715
404 Ga0207702_10002842
405 Ga0207641_10354427
406 Ga0207674_10000172
407 Ga0207675_100013355
408 Ga0209971_1019864
409 Ga0209974_10009127
410 Ga0207428_10005206
411 Ga0207428_10009331
412 Ga0207428_10010166
413 Ga0265323_10030391
414 Ga0307515_10123305
415 Ga0307416_100886480
416 Ga0373956_0010218
417 Ga0373955_0146597
418 Ga0316574_0020921
419 Ga0316574_0341102
420 Ga0373937_0094712
421 Ga0373937_0255776
422 Ga0373925_0341523
423 Ga0436364_0281867
424 Ga0436362_0393043
425 Ga0451793_1535963
426 Ga0451577_0006616
427 Ga0451577_0402783
428 Ga0453684_0000095
429 Ga0453684_0000728
430 Ga0466960_0004096
431 Ga0466960_0236643
432 Ga0451576_0139109
433 Ga0495603_0021488
434 Ga0495629_0003581
435 Ga0495638_0011438
436 Ga0495582_0036841
437 Ga0495584_0014821
438 Ga0495585_0003845
439 Ga0495594_0066795
440 Ga0495607_0013439
441 Ga0495644_0000584
442 Ga0495598_0003290
443 Ga0495598_0006199
444 Ga0495621_0039057
445 Ga0495633_0006366
446 Ga0495656_0000936
447 Ga0495634_0260260
448 Ga0495611_0008091
449 Ga0495659_0001209
450 Ga0495659_0091239
451 Ga0495659_0139732
452 Ga0495647_0039466
453 Ga0495658_0012052
454 Ga0495669_0008623
455 Ga0495613_0047214
456 Ga0495670_0000588
457 Ga0495671_0066268
458 Ga0495589_0292748
459 Ga0495636_0081232
460 Ga0495674_0046781
461 Ga0495593_0028549
462 Ga0495614_0059811
463 Ga0496108_0351176
464 Ga0496110_0173040
465 Ga0496112_0022071
466 Ga0496126_0014595
467 Ga0496126_0288851
468 Ga0501036_0029087
469 Ga0501037_0180439
470 Ga0501038_0123256
471 Ga0501039_0095619
472 Ga0501041_0107125
473 Ga0501042_0098734
474 Ga0501043_0451081
475 Ga0501046_0106153
476 Ga0501046_0160925
477 Ga0501047_0190903
478 Ga0501048_0301813
479 Ga0501068_0378769
480 Ga0501070_0025102
481 Ga0501070_0606488
482 Ga0501071_0081643
483 Ga0501071_0108958
484 Ga0501071_0280821
485 Ga0501072_0009500
486 Ga0501072_0012547
487 Ga0501072_0720445
488 Ga0501074_0077253
489 Ga0501075_0013081
490 Ga0501075_0021136
491 Ga0501075_0063065
492 Ga0501076_0033267
493 Ga0501076_0086604
494 Ga0501076_0194081
495 Ga0501076_0229302
496 Ga0501077_0004301
497 Ga0501077_0007309
498 Ga0501079_0004301
499 Ga0501079_0241092
500 Ga0501079_0261272
501 Ga0501080_0107826
502 Ga0501080_0273746
503 Ga0501081_0001332
504 Ga0501081_0002541
505 Ga0501083_0138315
506 Ga0501035_0099292
507 nmdc:mga0yw44_3358_c1
508 nmdc:mga05p37_169743_c1
509 nmdc:mga05p37_192811_c1
510 nmdc:mga05p37_73072_c1
511 nmdc:mga05p37_8121_c1
512 nmdc:mga05p37_9882_c1
513 nmdc:mga09592_129855_c1
514 nmdc:mga09592_28480_c1
515 nmdc:mga09592_35766_c1
516 nmdc:mga09592_420_c1
517 nmdc:mga0qj67_11216_c1
518 nmdc:mga0qj67_148803_c1
519 nmdc:mga0qj67_21745_c1
520 nmdc:mga0qj67_3164_c1
521 nmdc:mga0qj67_71691_c1
522 nmdc:mga06r32_11378_c1
523 nmdc:mga06r32_1954_c1
524 nmdc:mga06r32_228305_c1
525 nmdc:mga06r32_4440_c1
526 nmdc:mga06r32_7784_c1
527 nmdc:mga08y16_12036_c1
528 nmdc:mga08y16_5561_c1
529 nmdc:mga08y16_6714_c1
530 nmdc:mga0n895_182051_c1
531 nmdc:mga0n895_60548_c1
532 nmdc:mga0a205_4986_c1
533 nmdc:mga0sz30_12810_c1
534 nmdc:mga0sz30_6099_c3
535 Ga0495619_0002074
536 Ga0495619_0042446
537 Ga0500556_0000426
538 Ga0500562_000183
539 Ga0500593_001014
540 Ga0500559_0000050
541 Ga0501084_0001846
542 Ga0501084_0003520
543 Ga0501084_0258498
544 Ga0501084_0304536
545 Ga0501084_0372063
546 Ga0501082_0011213
547 Ga0501082_0012412
548 Ga0501082_0409353
549 Ga0530510_0008251
550 Ga0530510_0112607
551 3003669668
552 2596373110
553 2599939464
554 2874127222
555 2874170094
556 2881415961

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00005

ABC_tran

ABC transporter

64

225

0.96

PF12399

BCA_ABC_TP_C

Branched-chain amino acid ATP-binding cassette transporter

274

300

0.93

Structural Annotation

Top 5 Hits

ID Description Score Start End
4yer-assembly1.cif.gz_A crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution 0.9348 27 266
4yer-assembly1.cif.gz_B crystal structure of an abc transporter atp-binding protein (tm_1403) from thermotoga maritima msb8 at 2.35 a resolution 0.9315 27 266
5x5y-assembly1.cif.gz_A a membrane protein complex 0.9249 30 277
6mjp-assembly1.cif.gz_B lptb(e163q)fgc from vibrio cholerae 0.9225 30 275
7efo-assembly1.cif.gz_A lptb2fg-lps from klebsiella pneumoniae in nanodiscs 0.9193 30 277
ID Description Score Start End Superfamily
af_P0A9S7_4_254_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9609 29 278 3.40.50.300
af_P0A9S7_4_254_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9535 29 278 3.40.50.300
2awoD01 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9384 30 260 3.40.50.300
af_P07821_3_262_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9312 21 275 3.40.50.300
af_Q1RS86_918_1157_3.40.50.300 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;P-loop containing nucleotide triphosphate hydrolases 0.9269 27 252 3.40.50.300
ID Description Score Start End GO Terms
AF-A0A522SVT7-F1-model_v4 ABC transporter ATP-binding protein 0.9625 27 277 GO:0005524
GO:0005886
GO:0016887
AF-A0A3B0SSC0-F1-model_v4 Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) 0.9613 27 277 GO:0005524
GO:0005886
GO:0016887
AF-A0A2R4M201-F1-model_v4 ABC transporter ATP-binding protein 0.9588 28 277 GO:0005304
GO:0005524
GO:0005886
GO:0015188
GO:0015192
GO:0015808
GO:0016887
GO:0042941
GO:1903805
GO:1903806
AF-A0A3F2U2R3-F1-model_v4 ABC transporter ATP-binding protein 0.9578 30 278 GO:0005304
GO:0005524
GO:0005886
GO:0015188
GO:0015192
GO:0015808
GO:0016887
GO:0042941
GO:1903805
GO:1903806
AF-A0A496YN93-F1-model_v4 ABC transporter ATP-binding protein 0.9561 52 278 GO:0005524
GO:0005886
GO:0016887

Map