F382728

General Info

Members Datasets Scaffolds Average Seq Length
278 218 209 397

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2738543005|2739206881
Length 430
Sequence LFGGSRYRKGAQAAESPTLFSVTAPSTASNAPQPSAGQYDLIVVGSGFFGLTIAERAATQLGKRVLVVERRHHLGGNAYSEAEPETGIEIHKYGAHLFHTSNKRVWDYVTQFTEFTSYQHRVFAMHKGQSYQFPMGLGLVSQFFGRYFSPEEAKALIAEQSAEIESKDASNLEEKAISLIGRPLYEAFVRDYTAKQWQTDPKNLPAGNITRLPVRYTFDNRYFNDTYEGLPVDGYTAWLENMAKDDKIEVRVNTDWFDVRDDIRAANPDAPVVYTGPLDRYFDYAEGELGWRTLDFETEVLPTGDFQGTPVMNYNDADVPFTRIHEFRHFHPEREYPKDKTVVMREFSRFAESDDEPYYPINTPEDRAKLEAYRARAKAEAADSKVLFGGRLGTYQYLDMHMAIASALSMFDNTLRPHLESGEALAGDLA

Samples

Sample ID Description Type Environment
1 2547132424 Nocardia nova SH22a Isolate Unclassified
2 2551306166 Nocardia tenerifensis NBRC 101015 Isolate Rhizosphere
3 2554235227 Arthrobacter sp. PAO19 Isolate Rhizosphere
4 2558860112 Pseudonocardia acaciae DSM 45401 Isolate Unclassified
5 2558860280 Kutzneria sp. 744 Isolate Unclassified
6 2565956761 Rhodococcus qingshengii BKS 20-40 Isolate Rhizosphere
7 2582580736 Prauserella sp. Am3 Isolate Unclassified
8 2622736605 Geodermatophilus ruber DSM 45317 Isolate Rhizosphere
9 2643221553 Microbacterium sp. Root553 Isolate Unclassified
10 2643221575 Microbacterium sp. Root61 Isolate Unclassified
11 2643221692 Nocardia sp. Root136 Isolate Unclassified
12 2654587600 Glutamicibacter halophytocola KLBMP5180 Isolate Unclassified
13 2738541264 Mycobacterium sp. OK889 Isolate Unclassified
14 2738541308 Rhodococcus sp. OK551 Isolate Unclassified
15 2738541356 Mycobacterium sp. OK887 Isolate Unclassified
16 2738543005 Rhodococcus sp. OK519 Isolate Unclassified
17 2738543011 Rhodococcus sp. OK611 Isolate Unclassified
18 2738543034 Rhodococcus sp. OK269 Isolate Unclassified
19 2751185725 Microbispora sp. NRRL B-24597 Isolate Unclassified
20 2751185734 Saccharothrix sp. NRRL B-16314 Isolate Rhizosphere
21 2751185792 Kitasatospora arboriphila NRRL B-24581 Isolate Unclassified
22 2775506925 Saccharopolyspora phatthalungensis NRRL B-24798 Isolate Rhizosphere
23 2795385470 Labedaea rhizosphaerae DSM 45361 Isolate Rhizosphere
24 2808606522 Amycolatopsis sp. BJA-103 Isolate Unclassified
25 2816332139 Pseudonocardia kunmingensis DSM 45301 Isolate Unclassified
26 2833709550 Microbacterium sp. 3290 Isolate Rhizosphere
27 2842888712 Tsukamurella sp. R-71941 Isolate Unclassified
28 2857723135 Microbacterium sp. R-72356 Isolate Unclassified
29 2857740372 Paenarthrobacter sp. R-74611 Isolate Unclassified
30 2863067949 Saccharopolyspora phatthalungensis DSM 45584 (Annotation) (version 2) Isolate Rhizosphere
31 2866612099 Amycolatopsis suaedae 8-3EHSu Isolate Unclassified
32 2870721527 Saccharothrix ecbatanensis DSM 45486 Isolate Rhizosphere
33 2870782633 Pseudonocardia eucalypti DSM 45351 Isolate Unclassified
34 2889300758 Rhodococcus sp. PvR099 Isolate Rhizosphere
35 2891326441 Actinokineospora pegani TRM65233 Isolate Unclassified
36 2899370129 Amycolatopsis alkalitolerans SYSUP0005 Isolate Stem Tuber
37 2904497146 Arthrobacter sp. 1276 Isolate Rhizosphere
38 2904535858 Rhodococcus erythropolis 2017 Isolate Unclassified
39 2904765812 Rhodococcus fascians 1590 Isolate Rhizosphere
40 2904770941 Rhodococcus fascians 1339 Isolate Rhizosphere
41 2904776348 Paenarthrobacter sp. 1092 Isolate Rhizosphere
42 2908811453 Rhodococcus sp. 1R11 Isolate Unclassified
43 2915358134 Pseudonocardia pini CAP47R Isolate Unclassified
44 2919034639 Paenarthrobacter nitroguajacolicus 247 Isolate Rhizosphere
45 2919059106 Arthrobacter sp. 1088 Isolate Rhizosphere
46 2919395869 Microbacterium resistens 2980 Isolate Unclassified
47 2919420072 Rhodococcus fascians 3241 Isolate Rhizosphere
48 2919432681 Rhodococcus sp. 3258 Isolate Rhizosphere
49 2919538618 Paenarthrobacter nitroguajacolicus 3945 Isolate Unclassified
50 2919713450 Nocardia kruczakiae 4272 Isolate Rhizosphere
51 2922554459 Rhodococcus sp. 66b Isolate Unclassified
52 2928142448 Prescottella equi DPS 2018 Isolate Unclassified
53 2932398195 Dietzia sp. 2505 Isolate Rhizosphere
54 2932426870 Paenarthrobacter sp. 4246 Isolate Rhizosphere
55 2933418574 Jeotgalibacillus campisalis 4120 Isolate Rhizosphere
56 2939647034 Arthrobacter sp. 2762 Isolate Rhizosphere
57 2939674588 Arthrobacter bambusae 3552 Isolate Rhizosphere
58 2939743619 Rhodococcus sp. PvR044 Isolate Rhizosphere
59 2946003308 Arthrobacter agilis W3I6 Isolate Rhizosphere
60 2946033335 Microbacterium sp. W4I4 Isolate Rhizosphere
61 2946041624 Microbacterium natoriense W4I9-1 Isolate Rhizosphere
62 2946080515 Microbacterium sp. W4I20 Isolate Rhizosphere
63 2956939328 Lolliginicoccus suaedae LNNU 331112 Isolate Rhizosphere
64 2974315732 Rhodococcus sp. SORGH_AS 301 Isolate Unclassified
65 2984523437 Rhodococcus sp. SORGH_AS303 Isolate Aerial Root
66 3001119090 Lolliginicoccus lacisalsi G463 Isolate Rhizosphere
67 3300001979 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6 Metagenome Rhizosphere
68 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
69 3300005337 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG Metagenome Rhizosphere
70 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
71 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
72 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
73 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
74 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
75 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
76 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
77 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
78 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
79 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
80 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
81 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
82 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
83 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
84 3300006038 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 Metagenome Endosphere
85 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
86 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
87 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
88 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
89 3300009036 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG Metagenome Rhizosphere
90 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
91 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
92 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
93 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
94 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
95 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
96 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
97 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
98 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
99 3300021384 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 Metagenome Unclassified
100 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
101 3300025246 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape CL_Col_mTSA (SPAdes) (version 2) Metagenome Unclassified
102 3300025303 Arabidopsis root microbial communities from North Carolina, USA - plate scrape MF_Cvi_mMS_r2 (SPAdes) (version 2) Metagenome Endosphere
103 3300025728 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025898 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
108 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300025935 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
111 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
117 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
119 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
120 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
121 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
122 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
123 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
124 3300028556 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-22 metaG Metagenome Rhizosphere
125 3300028558 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-24 metaG Metagenome Rhizosphere
126 3300028563 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-24 metaG Metagenome Rhizosphere
127 3300028577 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-8-21 metaG Metagenome Rhizosphere
128 3300030521 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 13_EM Metagenome Unclassified
129 3300030732 Rhizosphere soil microbial communities in infected wheat plant from Wellcamp field in Toowoomba, Australia - sample 1 Metagenome Rhizosphere
130 3300030736 Rhizosphere soil microbial communities in healthy wheat plant from Wellcamp field in Toowoomba, Australia - sample 6 Metagenome Rhizosphere
131 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
132 3300031247 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-25 metaG Metagenome Rhizosphere
133 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
134 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
135 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
136 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
137 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
138 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
139 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
140 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
141 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
142 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
143 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
144 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
145 3300035119 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_4 Metagenome Rhizosphere
146 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
147 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
148 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
149 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
150 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
151 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
152 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
153 3300044656 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA1R Metagenome Rhizosphere
154 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
155 3300044683 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA3R Metagenome Rhizosphere
156 3300044684 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC4R Metagenome Rhizosphere
157 3300044693 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC2R Metagenome Rhizosphere
158 3300044694 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC3R Metagenome Rhizosphere
159 3300044735 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA1R Metagenome Rhizosphere
160 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
161 3300044901 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COA4R Metagenome Rhizosphere
162 3300045049 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC3R Metagenome Rhizosphere
163 3300045836 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC4R Metagenome Rhizosphere
164 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
165 3300046530 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co1_10_5 rhizosphere Metagenome Rhizosphere
166 3300046531 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL2_41_30 rhizosphere Metagenome Rhizosphere
167 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
168 3300046694 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-847-Co2_69_13 rhizosphere Metagenome Rhizosphere
169 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
170 3300047323 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - SKWA-24-3-Co3_23_35 rhizosphere Metagenome Rhizosphere
171 3300048903 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7v unlabeled Metagenome Rhizoplane
172 3300048904 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_7w unlabeled Metagenome Rhizoplane
173 3300048905 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1c N15 Metagenome Rhizoplane
174 3300048906 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_1d N15 Metagenome Rhizoplane
175 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
176 3300048908 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2d N15 Metagenome Rhizoplane
177 3300048909 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3c N15 Metagenome Rhizoplane
178 3300048910 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_3d N15 Metagenome Rhizoplane
179 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
180 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
181 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
182 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
183 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
184 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
185 3300048917 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6c N15 Metagenome Rhizoplane
186 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
187 3300048919 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_7x unlabeled Metagenome Unclassified
188 3300048920 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1e N15 Metagenome Unclassified
189 3300048921 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_1f N15 Metagenome Unclassified
190 3300048922 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2e N15 Metagenome Unclassified
191 3300048923 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_2f N15 Metagenome Unclassified
192 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
193 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
194 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
195 3300048927 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_4e N15 Metagenome Unclassified
196 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
197 3300048929 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_6e N15 Metagenome Unclassified
198 3300049162 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_A_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
199 3300049527 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - J4_B_0_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
200 3300049533 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
201 3300049534 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - H4_B_2_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
202 3300049537 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - B12_A_3_control (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
203 3300049541 Metatranscriptome of panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F14_A_4_drought (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
204 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
205 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
206 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
207 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
208 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
209 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
210 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
211 3300050492 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5 re-annotation Metagenome Endosphere
212 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
213 3300053085 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-360-CL3_72_12 rhizosphere Metagenome Rhizosphere
214 3300059424 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 10_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
215 3300061719 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSC2R1 Metagenome Rhizosphere
216 8004021418 Arthrobacter sp. SDTb3-6 Isolate Rhizosphere
217 8004025490 Arthrobacter wenxiniae AETb3-4 Isolate Rhizosphere
218 8047710418 Umezawaea endophytica DSM 103496 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 73.02
Metatranscriptomes 2.16
Isolates 24.82

Biome Distribution

Category Percentage (%)
Aerial Root 0.36
Bulb 0
Endosphere 3.96
Nodule 0
Rhizoplane 10.07
Rhizosphere 61.51
Stem 0
Stem Tuber 0.36
Unclassified 23.74

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 JGI24740J21852_10020793 3300001979 Bacteria 2283
2 Ga0070676_10034155 3300005328 Bacteria 2920
3 Ga0070682_100047201 3300005337 Bacteria 2676
4 Ga0070688_100179200 3300005365 Bacteria 1468
5 Ga0070667_100011251 3300005367 Bacteria 7402
6 Ga0070714_100086665 3300005435 Bacteria 2737
7 Ga0070710_10000109 3300005437 Bacteria 38429
8 Ga0070663_100219061 3300005455 Bacteria 1493
9 Ga0070684_100152293 3300005535 Bacteria 2095
10 Ga0068853_100006942 3300005539 Bacteria 9042
11 Ga0068857_100295807 3300005577 Bacteria 1492
12 Ga0068854_100194564 3300005578 Bacteria 1591
13 Ga0068856_100155151 3300005614 Bacteria 2299
14 Ga0068859_100508738 3300005617 Bacteria 1299
15 Ga0068863_100016428 3300005841 Bacteria 7100
16 Ga0068862_100000066 3300005844 Bacteria 124095
17 Ga0068862_100063605 3300005844 Bacteria 3175
18 Ga0081455_10171320 3300005937 Bacteria 1653
19 Ga0075365_10002390 3300006038 Bacteria 9178
20 Ga0075363_100000380 3300006048 Bacteria 13452
21 Ga0075364_10071159 3300006051 Bacteria 2291
22 Ga0075364_10122793 3300006051 Bacteria 1739
23 Ga0075364_10193586 3300006051 Bacteria 1377
24 Ga0068865_100098974 3300006881 Bacteria 2131
25 Ga0097620_100508765 3300006931 Bacteria 1299
26 Ga0105244_10000685 3300009036 Bacteria 29664
27 Ga0105244_10001603 3300009036 Bacteria 17980
28 Ga0105245_10406990 3300009098 Bacteria 1361
29 Ga0105247_10021823 3300009101 Bacteria 3852
30 Ga0105248_10060988 3300009177 Bacteria 4234
31 Ga0105238_10003763 3300009551 Bacteria 15072
32 Ga0105238_10045952 3300009551 Bacteria 4409
33 Ga0105238_10051251 3300009551 Bacteria 4152
34 Ga0105246_10001899 3300011119 Bacteria 12590
35 Ga0157370_10009080 3300013104 Bacteria 10662
36 Ga0163163_10025453 3300014325 Bacteria 5641
37 Ga0157380_10000266 3300014326 Bacteria 31344
38 Ga0157379_10068782 3300014968 Bacteria 3166
39 Ga0213876_10056426 3300021384 Bacteria 2073
40 Ga0213875_10000060 3300021388 Bacteria 135020
41 Ga0213875_10002397 3300021388 Bacteria 11279
42 Ga0209646_1000134 3300025246 Bacteria 124492
43 Ga0209051_1002713 3300025303 Bacteria 12316
44 Ga0207655_1001640 3300025728 Bacteria 19855
45 Ga0207655_1002286 3300025728 Bacteria 15774
46 Ga0207692_10000816 3300025898 Bacteria 11134
47 Ga0207710_10010685 3300025900 Bacteria 3865
48 Ga0207688_10005633 3300025901 Bacteria 6812
49 Ga0207688_10054361 3300025901 Bacteria 2246
50 Ga0207688_10056803 3300025901 Bacteria 2200
51 Ga0207694_10003735 3300025924 Bacteria 12064
52 Ga0207694_10069473 3300025924 Bacteria 2752
53 Ga0207706_10021045 3300025933 Bacteria 5859
54 Ga0207709_10016153 3300025935 Bacteria 4148
55 Ga0207711_10065577 3300025941 Bacteria 3139
56 Ga0207689_10100107 3300025942 Bacteria 2381
57 Ga0207667_10168543 3300025949 Bacteria 2251
58 Ga0207658_10001787 3300025986 Bacteria 16104
59 Ga0207703_10114247 3300026035 Bacteria 2308
60 Ga0207639_10014016 3300026041 Bacteria 5625
61 Ga0207678_10119379 3300026067 Bacteria 2250
62 Ga0207708_10012977 3300026075 Bacteria 6213
63 Ga0207641_10004951 3300026088 Bacteria 11429
64 Ga0207648_10028015 3300026089 Bacteria 4999
65 Ga0207698_10069927 3300026142 Bacteria 2779
66 Ga0207698_10274631 3300026142 Bacteria 1555
67 Ga0207428_10004536 3300027907 Bacteria 13171
68 Ga0268265_10000062 3300028380 Bacteria 148317
69 Ga0268264_10153936 3300028381 Bacteria 2064
70 Ga0265337_1001488 3300028556 Bacteria 11486
71 Ga0265326_10000059 3300028558 Bacteria 64355
72 Ga0265319_1002281 3300028563 Bacteria 10580
73 Ga0265318_10031875 3300028577 Bacteria 2042
74 Ga0307511_10000368 3300030521 Bacteria 47905
75 Ga0316176_1147958 3300030732 Bacteria 4350
76 Ga0316180_1033909 3300030736 Bacteria 2220
77 Ga0265332_10023810 3300031238 Bacteria 2698
78 Ga0265340_10007998 3300031247 Bacteria 5729
79 Ga0265327_10000001 3300031251 Bacteria 894475
80 Ga0307513_10001973 3300031456 Bacteria 29050
81 Ga0307408_100060696 3300031548 Bacteria 2757
82 Ga0307408_100101832 3300031548 Bacteria 2189
83 Ga0307413_10001103 3300031824 Bacteria 9867
84 Ga0307410_10002984 3300031852 Bacteria 8354
85 Ga0307406_10001162 3300031901 Bacteria 14729
86 Ga0307407_10007578 3300031903 Bacteria 4924
87 Ga0307412_10001029 3300031911 Bacteria 15939
88 Ga0307409_100001261 3300031995 Bacteria 12200
89 Ga0307416_100021818 3300032002 Bacteria 4607
90 Ga0307416_100027407 3300032002 Bacteria 4218
91 Ga0307416_100036039 3300032002 Bacteria 3788
92 Ga0307411_10030082 3300032005 Bacteria 3325
93 Ga0307507_10190788 3300033179 Bacteria 1441
94 Ga0373956_0012428 3300035119 Bacteria 3529
95 Ga0395899_0085907 3300037312 Bacteria 2286
96 Ga0395900_0006202 3300037418 Bacteria 12485
97 Ga0395900_0024108 3300037418 Bacteria 6228
98 Ga0395900_0041641 3300037418 Bacteria 4735
99 Ga0395898_0023403 3300037466 Bacteria 6243
100 Ga0395898_0052991 3300037466 Bacteria 3962
101 Ga0436364_0022317 3300037853 Bacteria 87829
102 Ga0436364_0475075 3300037853 Bacteria 64774
103 Ga0395901_0041686 3300038443 Bacteria 4758
104 Ga0436365_0099179 3300039437 Bacteria 6846
105 Ga0436361_0543548 3300039447 Bacteria 5228
106 Ga0466969_0023393 3300044656 Bacteria 3184
107 Ga0466972_0000794 3300044658 Bacteria 14991
108 Ga0466972_0070424 3300044658 Bacteria 1669
109 Ga0466965_0000327 3300044683 Bacteria 15901
110 Ga0466965_0001546 3300044683 Bacteria 9354
111 Ga0466965_0077185 3300044683 Bacteria 1682
112 Ga0466965_0079942 3300044683 Bacteria 1652
113 Ga0466966_0001916 3300044684 Bacteria 13486
114 Ga0466966_0035843 3300044684 Bacteria 3204
115 Ga0466961_0006775 3300044693 Bacteria 7292
116 Ga0466961_0168320 3300044693 Bacteria 1363
117 Ga0466963_0000498 3300044694 Bacteria 18302
118 Ga0466963_0017831 3300044694 Bacteria 4430
119 Ga0466963_0026813 3300044694 Bacteria 3687
120 Ga0466968_0000270 3300044735 Bacteria 16603
121 Ga0466957_0009959 3300044842 Bacteria 5437
122 Ga0466957_0054946 3300044842 Bacteria 2432
123 Ga0466960_0011174 3300044901 Bacteria 3746
124 Ga0466959_0001738 3300045049 Bacteria 13546
125 Ga0466959_0007739 3300045049 Bacteria 7553
126 Ga0466958_0000272 3300045836 Bacteria 19930
127 Ga0466958_0090718 3300045836 Bacteria 1891
128 Ga0466967_0000575 3300045976 Bacteria 18088
129 Ga0466967_0005914 3300045976 Bacteria 8575
130 Ga0466967_0008350 3300045976 Bacteria 7579
131 Ga0466967_0038415 3300045976 Bacteria 4106
132 Ga0466967_0131824 3300045976 Bacteria 2321
133 Ga0466967_0152358 3300045976 Bacteria 2162
134 Ga0495654_0030301 3300046530 Bacteria 2754
135 Ga0495665_0015024 3300046531 Bacteria 4172
136 Ga0495588_0047243 3300046674 Bacteria 2210
137 Ga0495649_0105058 3300046694 Bacteria 1500
138 Ga0495581_0041574 3300047315 Bacteria 2660
139 Ga0495683_0000230 3300047323 Bacteria 51313
140 Ga0496100_0000214 3300048903 Bacteria 31974
141 Ga0496100_0120676 3300048903 Bacteria 1833
142 Ga0496101_0000034 3300048904 Bacteria 178045
143 Ga0496101_0075962 3300048904 Bacteria 2474
144 Ga0496102_0003951 3300048905 Bacteria 12567
145 Ga0496102_0029192 3300048905 Bacteria 4933
146 Ga0496103_0001837 3300048906 Bacteria 13797
147 Ga0496103_0058563 3300048906 Bacteria 2393
148 Ga0496104_0003089 3300048907 Bacteria 14349
149 Ga0496104_0063700 3300048907 Bacteria 3497
150 Ga0496105_0005823 3300048908 Bacteria 9402
151 Ga0496106_0000972 3300048909 Bacteria 20919
152 Ga0496107_0000108 3300048910 Bacteria 40403
153 Ga0496108_0010027 3300048911 Bacteria 7682
154 Ga0496108_0010688 3300048911 Bacteria 7448
155 Ga0496108_0031982 3300048911 Bacteria 4367
156 Ga0496108_0144555 3300048911 Bacteria 2049
157 Ga0496109_0000127 3300048912 Bacteria 77905
158 Ga0496109_0019967 3300048912 Bacteria 5915
159 Ga0496110_0004919 3300048913 Bacteria 10431
160 Ga0496110_0028767 3300048913 Bacteria 4777
161 Ga0496111_0092229 3300048914 Bacteria 2220
162 Ga0496112_0000750 3300048915 Bacteria 22692
163 Ga0496112_0061252 3300048915 Bacteria 3709
164 Ga0496112_0234497 3300048915 Bacteria 1789
165 Ga0496113_0016847 3300048916 Bacteria 5057
166 Ga0496114_0000277 3300048917 Bacteria 37457
167 Ga0496115_0008407 3300048918 Bacteria 7639
168 Ga0496116_0017781 3300048919 Bacteria 5505
169 Ga0496117_0021058 3300048920 Bacteria 5294
170 Ga0496118_0021693 3300048921 Bacteria 5643
171 Ga0496118_0090454 3300048921 Bacteria 2109
172 Ga0496119_0002179 3300048922 Bacteria 21959
173 Ga0496119_0017153 3300048922 Bacteria 5465
174 Ga0496119_0052260 3300048922 Bacteria 2504
175 Ga0496119_0064139 3300048922 Bacteria 2182
176 Ga0496120_0013581 3300048923 Bacteria 5473
177 Ga0496120_0035031 3300048923 Bacteria 3002
178 Ga0496121_0000048 3300048924 Bacteria 330242
179 Ga0496122_0000522 3300048925 Bacteria 79377
180 Ga0496122_0002970 3300048925 Bacteria 23110
181 Ga0496122_0043866 3300048925 Bacteria 3498
182 Ga0496123_0000251 3300048926 Bacteria 108664
183 Ga0496124_0000044 3300048927 Bacteria 289064
184 Ga0496124_0037184 3300048927 Bacteria 4237
185 Ga0496125_0000037 3300048928 Bacteria 330242
186 Ga0496125_0022719 3300048928 Bacteria 5814
187 Ga0496125_0103377 3300048928 Bacteria 2090
188 Ga0496126_0000046 3300048929 Bacteria 330242
189 Ga0496126_0002688 3300048929 Bacteria 23495
190 Ga0496126_0096208 3300048929 Bacteria 2596
191 Ga0501307_001115 3300049162 Bacteria 2157
192 Ga0501311_000854 3300049527 Bacteria 2387
193 Ga0501317_004653 3300049533 Bacteria 1438
194 Ga0501318_001985 3300049534 Bacteria 1710
195 Ga0501321_001199 3300049537 Bacteria 1996
196 Ga0501325_000190 3300049541 Bacteria 2450
197 Ga0501032_0002014 3300049569 Bacteria 16010
198 Ga0501034_0000051 3300049571 Bacteria 210960
199 Ga0501037_0013850 3300049573 Bacteria 5943
200 Ga0501038_0027741 3300049574 Bacteria 5034
201 Ga0501047_0315853 3300049581 Bacteria 1403
202 nmdc:mga03n38_1429_c1 3300050490 Bacteria 6825
203 nmdc:mga00v17_33210_c1 3300050491 Bacteria 3056
204 nmdc:mga00v17_88446_c1 3300050491 Bacteria 1942
205 nmdc:mga0yw44_1093_c1 3300050492 Bacteria 10433
206 nmdc:mga07m45_82334_c1 3300050496 Bacteria 1838
207 Ga0495619_0013270 3300053085 Bacteria 5191
208 Ga0590075_012323 3300059424 Bacteria 2076
209 Ga0466962_0006814 3300061719 Bacteria 5483

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Sample Scaffold Protein Protein Length
1 3300044683 Ga0466965_0077185 Ga0466965_0077185_511_1605 346
2 3300028577 Ga0265318_10031875 Ga0265318_100318751 353
3 3300031247 Ga0265340_10007998 Ga0265340_100079984 353
4 3300044684 Ga0466966_0035843 Ga0466966_0035843_1978_3165 357
5 3300044693 Ga0466961_0168320 Ga0466961_0168320_128_1315 357
6 iso_pu_bacteria 2622736605 2623502264 362
7 3300031251 Ga0265327_10000001 Ga0265327_1000000147 364
8 3300014326 Ga0157380_10000266 Ga0157380_1000026625 365
9 3300048914 Ga0496111_0092229 Ga0496111_0092229_546_1682 365
10 3300048925 Ga0496122_0000522 Ga0496122_0000522_50380_51516 365
11 3300048926 Ga0496123_0000251 Ga0496123_0000251_63841_64977 365
12 3300048927 Ga0496124_0037184 Ga0496124_0037184_2489_3625 365
13 3300048928 Ga0496125_0022719 Ga0496125_0022719_4559_5695 365
14 3300048929 Ga0496126_0002688 Ga0496126_0002688_12507_13643 365
15 3300028556 Ga0265337_1001488 Ga0265337_10014882 366
16 3300028558 Ga0265326_10000059 Ga0265326_1000005912 366
17 3300028563 Ga0265319_1002281 Ga0265319_100228110 366
18 3300031238 Ga0265332_10023810 Ga0265332_100238103 366
19 3300005937 Ga0081455_10171320 Ga0081455_101713201 368
20 3300039447 Ga0436361_0543548 Ga0436361_0543548_2955_4154 369
21 3300048923 Ga0496120_0035031 Ga0496120_0035031_1770_2945 369
22 3300033179 Ga0307507_10190788 Ga0307507_101907882 370
23 3300044694 Ga0466963_0026813 Ga0466963_0026813_2371_3546 370
24 3300045836 Ga0466958_0090718 Ga0466958_0090718_314_1489 370
25 iso_pu_bacteria 2558860112 2558910352 370
26 iso_pu_bacteria 2915358134 2915359409 370
27 3300005328 Ga0070676_10034155 Ga0070676_100341552 371
28 3300005437 Ga0070710_10000109 Ga0070710_1000010914 371
29 3300005455 Ga0070663_100219061 Ga0070663_1002190611 371
30 3300005535 Ga0070684_100152293 Ga0070684_1001522932 371
31 3300005539 Ga0068853_100006942 Ga0068853_1000069425 371
32 3300005577 Ga0068857_100295807 Ga0068857_1002958071 371
33 3300005578 Ga0068854_100194564 Ga0068854_1001945641 371
34 3300005614 Ga0068856_100155151 Ga0068856_1001551512 371
35 3300005617 Ga0068859_100508738 Ga0068859_1005087381 371
36 3300005841 Ga0068863_100016428 Ga0068863_1000164283 371
37 3300005844 Ga0068862_100000066 Ga0068862_10000006620 371
38 3300005844 Ga0068862_100063605 Ga0068862_1000636052 371
39 3300006881 Ga0068865_100098974 Ga0068865_1000989742 371
40 3300006931 Ga0097620_100508765 Ga0097620_1005087651 371
41 3300009098 Ga0105245_10406990 Ga0105245_104069901 371
42 3300009101 Ga0105247_10021823 Ga0105247_100218232 371
43 3300009177 Ga0105248_10060988 Ga0105248_100609883 371
44 3300009551 Ga0105238_10003763 Ga0105238_100037634 371
45 3300009551 Ga0105238_10045952 Ga0105238_100459522 371
46 3300014325 Ga0163163_10025453 Ga0163163_100254531 371
47 3300014968 Ga0157379_10068782 Ga0157379_100687822 371
48 3300021388 Ga0213875_10002397 Ga0213875_1000239712 371
49 3300025898 Ga0207692_10000816 Ga0207692_100008165 371
50 3300025900 Ga0207710_10010685 Ga0207710_100106853 371
51 3300025901 Ga0207688_10005633 Ga0207688_100056334 371
52 3300025901 Ga0207688_10054361 Ga0207688_100543612 371
53 3300025901 Ga0207688_10056803 Ga0207688_100568032 371
54 3300025924 Ga0207694_10003735 Ga0207694_100037353 371
55 3300025933 Ga0207706_10021045 Ga0207706_100210452 371
56 3300025941 Ga0207711_10065577 Ga0207711_100655773 371
57 3300025942 Ga0207689_10100107 Ga0207689_101001072 371
58 3300025949 Ga0207667_10168543 Ga0207667_101685432 371
59 3300026035 Ga0207703_10114247 Ga0207703_101142471 371
60 3300026041 Ga0207639_10014016 Ga0207639_100140164 371
61 3300026067 Ga0207678_10119379 Ga0207678_101193792 371
62 3300026075 Ga0207708_10012977 Ga0207708_100129772 371
63 3300026088 Ga0207641_10004951 Ga0207641_100049513 371
64 3300026089 Ga0207648_10028015 Ga0207648_100280152 371
65 3300026142 Ga0207698_10069927 Ga0207698_100699272 371
66 3300026142 Ga0207698_10274631 Ga0207698_102746311 371
67 3300028380 Ga0268265_10000062 Ga0268265_1000006218 371
68 3300028381 Ga0268264_10153936 Ga0268264_101539362 371
69 3300030521 Ga0307511_10000368 Ga0307511_1000036842 371
70 3300030732 Ga0316176_1147958 Ga0316176_11479581 371
71 3300030736 Ga0316180_1033909 Ga0316180_10339092 371
72 3300031456 Ga0307513_10001973 Ga0307513_100019732 371
73 3300031548 Ga0307408_100101832 Ga0307408_1001018322 371
74 3300031824 Ga0307413_10001103 Ga0307413_100011037 371
75 3300032002 Ga0307416_100021818 Ga0307416_1000218184 371
76 3300032002 Ga0307416_100036039 Ga0307416_1000360394 371
77 3300032005 Ga0307411_10030082 Ga0307411_100300822 371
78 3300035119 Ga0373956_0012428 Ga0373956_0012428_964_2151 371
79 3300037418 Ga0395900_0041641 Ga0395900_0041641_821_2014 371
80 3300037853 Ga0436364_0475075 Ga0436364_0475075_50875_52065 371
81 3300044656 Ga0466969_0023393 Ga0466969_0023393_804_1991 371
82 3300044658 Ga0466972_0000794 Ga0466972_0000794_12710_13897 371
83 3300044683 Ga0466965_0000327 Ga0466965_0000327_6051_7277 371
84 3300044683 Ga0466965_0001546 Ga0466965_0001546_1505_2692 371
85 3300044684 Ga0466966_0001916 Ga0466966_0001916_12076_13263 371
86 3300044693 Ga0466961_0006775 Ga0466961_0006775_3870_5075 371
87 3300044694 Ga0466963_0017831 Ga0466963_0017831_1858_3045 371
88 3300044842 Ga0466957_0054946 Ga0466957_0054946_62_1249 371
89 3300044901 Ga0466960_0011174 Ga0466960_0011174_1242_2429 371
90 3300045049 Ga0466959_0007739 Ga0466959_0007739_287_1474 371
91 3300045976 Ga0466967_0005914 Ga0466967_0005914_4311_5597 371
92 3300045976 Ga0466967_0131824 Ga0466967_0131824_176_1363 371
93 3300048911 Ga0496108_0144555 Ga0496108_0144555_12_1199 371
94 3300048921 Ga0496118_0090454 Ga0496118_0090454_349_1572 371
95 3300048922 Ga0496119_0017153 Ga0496119_0017153_1223_2485 371
96 3300048923 Ga0496120_0013581 Ga0496120_0013581_2997_4259 371
97 3300053085 Ga0495619_0013270 Ga0495619_0013270_880_2049 371
98 iso_pu_bacteria 2558860280 2559427814 371
99 iso_pu_bacteria 2751185734 2753069194 371
100 iso_pu_bacteria 2775506925 2776369391 371
101 iso_pu_bacteria 2795385470 2795780680 371
102 iso_pu_bacteria 2816332139 2816506438 371
103 iso_pu_bacteria 2863067949 2863069688 371
104 iso_pu_bacteria 2870721527 2870728331 371
105 iso_pu_bacteria 2870782633 2870787764 371
106 iso_pu_bacteria 2899370129 2899376263 371
107 iso_pu_bacteria 8047710418 8047717641 371
108 3300005365 Ga0070688_100179200 Ga0070688_1001792001 372
109 3300021384 Ga0213876_10056426 Ga0213876_100564262 372
110 3300021388 Ga0213875_10000060 Ga0213875_1000006053 372
111 3300037853 Ga0436364_0022317 Ga0436364_0022317_13429_14610 372
112 3300039437 Ga0436365_0099179 Ga0436365_0099179_19_1200 372
113 3300044683 Ga0466965_0079942 Ga0466965_0079942_57_1250 372
114 3300044694 Ga0466963_0000498 Ga0466963_0000498_5145_6335 372
115 3300044735 Ga0466968_0000270 Ga0466968_0000270_8721_9914 372
116 3300044842 Ga0466957_0009959 Ga0466957_0009959_2622_3812 372
117 3300045049 Ga0466959_0001738 Ga0466959_0001738_11956_13146 372
118 3300045836 Ga0466958_0000272 Ga0466958_0000272_6293_7483 372
119 3300045976 Ga0466967_0000575 Ga0466967_0000575_9705_10898 372
120 3300045976 Ga0466967_0008350 Ga0466967_0008350_1468_2658 372
121 3300045976 Ga0466967_0038415 Ga0466967_0038415_2333_3523 372
122 3300045976 Ga0466967_0152358 Ga0466967_0152358_799_1995 372
123 3300048907 Ga0496104_0003089 Ga0496104_0003089_11633_12832 372
124 3300048908 Ga0496105_0005823 Ga0496105_0005823_6405_7604 372
125 3300048911 Ga0496108_0010688 Ga0496108_0010688_4746_5945 372
126 3300048915 Ga0496112_0234497 Ga0496112_0234497_550_1749 372
127 3300061719 Ga0466962_0006814 Ga0466962_0006814_867_2057 372
128 iso_pu_bacteria 2582580736 2583148710 372
129 iso_pu_bacteria 2808606522 2809585761 372
130 iso_pu_bacteria 2866612099 2866612286 372
131 iso_pu_bacteria 2891326441 2891332096 372
132 3300006038 Ga0075365_10002390 Ga0075365_100023905 373
133 3300050492 nmdc:mga0yw44_1093_c1 nmdc:mga0yw44_1093_c1_4318_5526 373
134 iso_pu_bacteria 2857740372 2857741357 373
135 iso_pu_bacteria 2904497146 2904499831 373
136 iso_pu_bacteria 2904776348 2904776600 373
137 iso_pu_bacteria 2919034639 2919037722 373
138 iso_pu_bacteria 2919059106 2919061730 373
139 iso_pu_bacteria 2919538618 2919542133 373
140 iso_pu_bacteria 2932426870 2932429205 373
141 iso_pu_bacteria 2933418574 2933420689 373
142 iso_pu_bacteria 2939647034 2939648896 373
143 iso_pu_bacteria 2939674588 2939676098 373
144 iso_pu_bacteria 8004021418 8004023437 373
145 iso_pu_bacteria 8004025490 8004026480 373
146 3300005337 Ga0070682_100047201 Ga0070682_1000472011 374
147 3300005367 Ga0070667_100011251 Ga0070667_1000112512 374
148 3300006048 Ga0075363_100000380 Ga0075363_1000003803 374
149 3300009551 Ga0105238_10051251 Ga0105238_100512512 374
150 3300025924 Ga0207694_10069473 Ga0207694_100694732 374
151 3300025935 Ga0207709_10016153 Ga0207709_100161535 374
152 3300025986 Ga0207658_10001787 Ga0207658_100017879 374
153 3300046531 Ga0495665_0015024 Ga0495665_0015024_1690_2907 374
154 3300046674 Ga0495588_0047243 Ga0495588_0047243_84_1301 374
155 3300046694 Ga0495649_0105058 Ga0495649_0105058_147_1352 374
156 3300047315 Ga0495581_0041574 Ga0495581_0041574_52_1269 374
157 3300047323 Ga0495683_0000230 Ga0495683_0000230_41271_42470 374
158 3300048903 Ga0496100_0000214 Ga0496100_0000214_20712_21947 374
159 3300048903 Ga0496100_0120676 Ga0496100_0120676_57_1295 374
160 3300048904 Ga0496101_0000034 Ga0496101_0000034_156160_157395 374
161 3300048904 Ga0496101_0075962 Ga0496101_0075962_973_2211 374
162 3300048905 Ga0496102_0003951 Ga0496102_0003951_7239_8474 374
163 3300048906 Ga0496103_0001837 Ga0496103_0001837_11804_13039 374
164 3300048909 Ga0496106_0000972 Ga0496106_0000972_13305_14540 374
165 3300048910 Ga0496107_0000108 Ga0496107_0000108_38370_39605 374
166 3300048911 Ga0496108_0010027 Ga0496108_0010027_317_1552 374
167 3300048911 Ga0496108_0031982 Ga0496108_0031982_2102_3295 374
168 3300048912 Ga0496109_0000127 Ga0496109_0000127_56169_57404 374
169 3300048912 Ga0496109_0019967 Ga0496109_0019967_2913_4106 374
170 3300048913 Ga0496110_0004919 Ga0496110_0004919_5896_7131 374
171 3300048913 Ga0496110_0028767 Ga0496110_0028767_804_1997 374
172 3300048915 Ga0496112_0000750 Ga0496112_0000750_9455_10648 374
173 3300048915 Ga0496112_0061252 Ga0496112_0061252_1861_3099 374
174 3300048916 Ga0496113_0016847 Ga0496113_0016847_501_1739 374
175 3300048917 Ga0496114_0000277 Ga0496114_0000277_25592_26827 374
176 3300048918 Ga0496115_0008407 Ga0496115_0008407_834_2069 374
177 3300048919 Ga0496116_0017781 Ga0496116_0017781_2516_3751 374
178 3300048920 Ga0496117_0021058 Ga0496117_0021058_1416_2651 374
179 3300048921 Ga0496118_0021693 Ga0496118_0021693_2516_3751 374
180 3300048922 Ga0496119_0002179 Ga0496119_0002179_11048_12283 374
181 3300048924 Ga0496121_0000048 Ga0496121_0000048_110830_112065 374
182 3300048925 Ga0496122_0002970 Ga0496122_0002970_1265_2500 374
183 3300048925 Ga0496122_0043866 Ga0496122_0043866_2069_3307 374
184 3300048927 Ga0496124_0000044 Ga0496124_0000044_218178_219413 374
185 3300048928 Ga0496125_0000037 Ga0496125_0000037_110830_112065 374
186 3300048928 Ga0496125_0103377 Ga0496125_0103377_37_1251 374
187 3300048929 Ga0496126_0000046 Ga0496126_0000046_110830_112065 374
188 3300048929 Ga0496126_0096208 Ga0496126_0096208_809_2047 374
189 3300049581 Ga0501047_0315853 Ga0501047_0315853_137_1357 374
190 3300050490 nmdc:mga03n38_1429_c1 nmdc:mga03n38_1429_c1_4023_5216 374
191 3300050491 nmdc:mga00v17_88446_c1 nmdc:mga00v17_88446_c1_92_1306 374
192 3300050496 nmdc:mga07m45_82334_c1 nmdc:mga07m45_82334_c1_473_1690 374
193 iso_pu_bacteria 2551306166 2552104939 374
194 iso_pu_bacteria 2565956761 2566994658 374
195 iso_pu_bacteria 2643221553 2643785254 374
196 iso_pu_bacteria 2643221575 2643888469 374
197 iso_pu_bacteria 2643221692 2644517365 374
198 iso_pu_bacteria 2738541264 2738663832 374
199 iso_pu_bacteria 2738541308 2738891161 374
200 iso_pu_bacteria 2738541356 2739142967 374
201 iso_pu_bacteria 2738543005 2739206881 374
202 iso_pu_bacteria 2738543011 2739236300 374
203 iso_pu_bacteria 2738543034 2739366000 374
204 iso_pu_bacteria 2751185725 2753036769 374
205 iso_pu_bacteria 2751185792 2753324640 374
206 iso_pu_bacteria 2833709550 2833710225 374
207 iso_pu_bacteria 2857723135 2857723290 374
208 iso_pu_bacteria 2889300758 2889304234 374
209 iso_pu_bacteria 2904535858 2904536186 374
210 iso_pu_bacteria 2904765812 2904768393 374
211 iso_pu_bacteria 2904770941 2904775740 374
212 iso_pu_bacteria 2908811453 2908816008 374
213 iso_pu_bacteria 2919395869 2919396793 374
214 iso_pu_bacteria 2919420072 2919421764 374
215 iso_pu_bacteria 2919432681 2919434678 374
216 iso_pu_bacteria 2922554459 2922558111 374
217 iso_pu_bacteria 2928142448 2928147405 374
218 iso_pu_bacteria 2939743619 2939745372 374
219 iso_pu_bacteria 2946003308 2946005333 374
220 iso_pu_bacteria 2946033335 2946034315 374
221 iso_pu_bacteria 2946041624 2946043604 374
222 iso_pu_bacteria 2946080515 2946081463 374
223 iso_pu_bacteria 2956939328 2956940683 374
224 iso_pu_bacteria 2974315732 2974319704 374
225 iso_pu_bacteria 2984523437 2984523572 374
226 iso_pu_bacteria 3001119090 3001121002 374
227 3300005435 Ga0070714_100086665 Ga0070714_1000866652 375
228 3300009036 Ga0105244_10001603 Ga0105244_1000160310 375
229 3300011119 Ga0105246_10001899 Ga0105246_100018992 375
230 3300013104 Ga0157370_10009080 Ga0157370_100090802 375
231 3300025303 Ga0209051_1002713 Ga0209051_10027139 375
232 3300025728 Ga0207655_1001640 Ga0207655_10016405 375
233 3300025728 Ga0207655_1002286 Ga0207655_10022863 375
234 3300027907 Ga0207428_10004536 Ga0207428_100045367 375
235 3300031548 Ga0307408_100060696 Ga0307408_1000606962 375
236 3300031852 Ga0307410_10002984 Ga0307410_100029845 375
237 3300031903 Ga0307407_10007578 Ga0307407_100075782 375
238 3300031911 Ga0307412_10001029 Ga0307412_100010295 375
239 3300031995 Ga0307409_100001261 Ga0307409_1000012618 375
240 3300032002 Ga0307416_100027407 Ga0307416_1000274073 375
241 3300037312 Ga0395899_0085907 Ga0395899_0085907_651_1835 375
242 3300037418 Ga0395900_0006202 Ga0395900_0006202_3912_5096 375
243 3300037418 Ga0395900_0024108 Ga0395900_0024108_3805_4989 375
244 3300037466 Ga0395898_0023403 Ga0395898_0023403_2660_3844 375
245 3300037466 Ga0395898_0052991 Ga0395898_0052991_170_1354 375
246 3300038443 Ga0395901_0041686 Ga0395901_0041686_1947_3131 375
247 3300044658 Ga0466972_0070424 Ga0466972_0070424_327_1529 375
248 3300048905 Ga0496102_0029192 Ga0496102_0029192_2891_4075 375
249 3300048906 Ga0496103_0058563 Ga0496103_0058563_672_1856 375
250 3300049162 Ga0501307_001115 Ga0501307_001115_198_1382 375
251 3300049527 Ga0501311_000854 Ga0501311_000854_988_2172 375
252 3300049533 Ga0501317_004653 Ga0501317_004653_236_1420 375
253 3300049534 Ga0501318_001985 Ga0501318_001985_50_1234 375
254 3300049537 Ga0501321_001199 Ga0501321_001199_519_1703 375
255 3300049541 Ga0501325_000190 Ga0501325_000190_702_1886 375
256 3300049569 Ga0501032_0002014 Ga0501032_0002014_10698_11882 375
257 3300049571 Ga0501034_0000051 Ga0501034_0000051_144839_146023 375
258 3300049573 Ga0501037_0013850 Ga0501037_0013850_3001_4185 375
259 3300059424 Ga0590075_012323 Ga0590075_012323_825_2009 375
260 iso_pu_bacteria 2547132424 2548692401 375
261 iso_pu_bacteria 2842888712 2842890248 375
262 iso_pu_bacteria 2919713450 2919714808 375
263 iso_pu_bacteria 2932398195 2932400025 375
264 iso_pu_bacteria 2554235227 2555231749 376
265 3300001979 JGI24740J21852_10020793 JGI24740J21852_100207932 378
266 3300006051 Ga0075364_10071159 Ga0075364_100711591 378
267 3300006051 Ga0075364_10122793 Ga0075364_101227932 378
268 3300006051 Ga0075364_10193586 Ga0075364_101935861 378
269 3300009036 Ga0105244_10000685 Ga0105244_100006855 378
270 3300025246 Ga0209646_1000134 Ga0209646_100013425 378
271 3300031901 Ga0307406_10001162 Ga0307406_100011625 378
272 3300046530 Ga0495654_0030301 Ga0495654_0030301_574_1710 378
273 3300048907 Ga0496104_0063700 Ga0496104_0063700_934_2109 378
274 3300048922 Ga0496119_0052260 Ga0496119_0052260_383_1519 378
275 3300048922 Ga0496119_0064139 Ga0496119_0064139_744_1940 378
276 3300049574 Ga0501038_0027741 Ga0501038_0027741_1861_3009 378
277 3300050491 nmdc:mga00v17_33210_c1 nmdc:mga00v17_33210_c1_821_1957 378
278 iso_pu_bacteria 2654587600 2655032318 378

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF03275

GLF

UDP-galactopyranose mutase

187

397

0.97

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

43

112

0.94

PF01593

Amino_oxidase

Flavin containing amine oxidoreductase

50

259

0.63

Structural Annotation

Top 5 Hits

ID Description Score Start End
5vj7-assembly1.cif.gz_A ferredoxin nadp oxidoreductase (xfn) 0.9967 3 37
6qkg-assembly2.cif.gz_B 2-naphthoyl-coa reductase(ncr) 0.9833 2 39
4b3h-assembly1.cif.gz_B crystal structure of mycobacterium tuberculosis fatty acid beta- oxidation complex 0.9806 3 32
6c12-assembly2.cif.gz_A sdha-sdhe complex 0.9796 2 32
6l6j-assembly1.cif.gz_A structure of 6-hydroxypseudooxynicotine (6-hpon) amine oxidase (hisd) from pseudomonas geniculata n1 0.9791 3 37
ID Description Score Start End Superfamily
af_P9WN19_146_269_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9995 3 37 3.50.50.60
af_P37127_327_452_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9964 3 37 3.50.50.60
af_K8F7V7_1826_1944_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.995 3 37 3.50.50.60
af_M9NFH8_1768_1873_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.9944 3 37 3.40.50.720
af_P9WHH5_150_268_3.50.50.60 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9914 3 35 3.50.50.60
ID Description Score Start End GO Terms
AF-A0A7X6P5D5-F1-model_v4 NAD(P)-binding protein 0.9868 1 99 GO:0005829
GO:0008767
GO:0050660
AF-A0A060BZ65-F1-model_v4 GLF 0.9858 178 334 GO:0005829
GO:0008767
GO:0050660
AF-A0A5C7M5J0-F1-model_v4 UDP-galactopyranose mutase 0.9833 2 122 GO:0005829
GO:0008767
GO:0050660
AF-A0A7C8BXV9-F1-model_v4 UDP-galactopyranose mutase (EC 5.4.99.9) 0.9797 1 377 GO:0005829
GO:0008767
GO:0016020
GO:0050660
AF-A0A3L8P9U8-F1-model_v4 UDP-galactopyranose mutase 0.9797 204 328 GO:0005829
GO:0008767
GO:0050660

Feature Viewer

pLDDT pTM Quality
95.29 0.92 High
Powered by Feature Viewer

Predicted Structure (AlphaFold2)

Powered by PDBe Molstar
Download PDB Download HMM

Map