F382712

General Info

Members Datasets Scaffolds Average Seq Length
278 214 263 588

Family's Representative Sequence

Representative Sequence iso_pu_bacteria|2508501050|2508726447
Length 713
Sequence TEIHLPDIGDFKDVPVIEVHVHPGSRINVDDTLITLESDKATMDIPATAAGTVREVRVKAGDRVSQGDLIITLDAEGASAIPPKERIKEEATPSPGPGQAGYGSPSGLYESVEVRIPDIGDYTNVPIIEVHVQPGATVKVDDPLITLESDKATMEVPAAQSGTIREVKVKVGDRVSQDDVIAIIETSAGAAAVPLADHAPGQGQAGYGSSAVEARVGSKGDRHRAPAPAPKPPVAAAGDFHAEVLVLGAGPGGYTAAFRAADLGKKVVVVDRWPSLGGVCLNVGCIPSKALLHAAKVIDETKSMRAHGISFAEPSIDIEKLRGWKDGVVQRLTGGLAGLAKQRKVTVVSGIGRFASMNQLEVRSDKGPTKVVSFEQAIIAAGSEPVTLPFIPHDDPRVIDSTGALELDGIPPRLLVIGGGIIGLEMATVYHALGAKVTVVELMDQIIPGADKDIVTPLMKRISKLYEAIHLKAKVTKVEANGHGLTVHFEGGSAPATDIFDRILVAVGRKPNGKLIGAENAGIAVDARGFIPVDRQMRTNVPHIFAIGDIVGQPMLAHKAVHEGKVAAETAAGKNAFFDAKVIPSVAYTDPEVAWVGLTENEARATGIKYGKGVFPWAASGRSLSLGRDEGLTKVLFDEATDRIIGCSIVGPSAGDLIAEAALAIEMGADAQDIGLTIHPHPTLSETIGMAAEAFEGTITDLYMPKKEPKKAH

Samples

Sample ID Description Type Environment
1 2508501050 Microvirga lupini Lut6 Isolate Nodule
2 2545555834 Methylobacterium sp. WSM2598 Isolate Nodule
3 2643221579 Pseudoxanthomonas sp. Root630 Isolate Unclassified
4 2713897090 Paracoccus sphaerophysae HAMBI 3106 Isolate Nodule
5 2738541281 Methylobacterium sp. GV094 Isolate Unclassified
6 2738543032 Methylobacterium sp. GV104 Isolate Unclassified
7 2775506901 Microvirga ossetica V5/3m Isolate Unclassified
8 2842333319 Skermanella aerolata SEMIA 4010 Isolate Nodule
9 2855020534 Paracoccus endophyticus SYSUP0003 Isolate Stem Tuber
10 2894232714 Microvirga tunisiensis Lmie10 Isolate Nodule
11 2919513703 Luteimonas sp. 3794 Isolate Unclassified
12 2919675420 Luteimonas terrae 4099 Isolate Unclassified
13 3003665799 Methylobacterium aquaticum BG2 Isolate Unclassified
14 3300003308 Avena fatua rhizosphere microbial communities - H4_Rhizo_Litter_20 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
15 3300003544 Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_33 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
16 3300003574 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_26 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
17 3300003575 Grassland soil microbial communities from Hopland, California, USA - Sample H1_Rhizo_25 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
18 3300003577 Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_32 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
19 3300003579 Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_45 (Metagenome Metatranscriptome, Counting Only) Metatranscriptome Rhizosphere
20 3300003693 Avena fatua rhizosphere microbial communities - H2_Rhizo_Litter_49 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
21 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
22 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
23 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
24 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
25 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
26 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
27 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
28 3300005437 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG Metagenome Rhizosphere
29 3300005439 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG Metagenome Rhizosphere
30 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
31 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
32 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
33 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
34 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
35 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
36 3300005547 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG Metagenome Rhizosphere
37 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
38 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
39 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
40 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
41 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
42 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
43 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
44 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
45 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
46 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
47 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
48 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
49 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
50 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
51 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
52 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
53 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
54 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
55 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
56 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
57 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
58 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
59 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
60 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
61 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
62 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
63 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
64 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
65 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
66 3300011119 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG Metagenome Rhizosphere
67 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
68 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
69 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
70 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
71 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
72 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
73 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
74 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
75 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
76 3300021388 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 Metagenome Unclassified
77 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025907 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025913 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025918 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025928 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300026035 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes) (version 2) Metagenome Rhizosphere
95 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
97 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
100 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
101 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
102 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
103 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
104 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
105 3300031507 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 10_EM Metagenome Unclassified
106 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
107 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
108 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
109 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
110 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
111 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
112 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
113 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
114 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
115 3300035086 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_4 Metagenome Rhizosphere
116 3300035089 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_2 Metagenome Rhizosphere
117 3300035111 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_11 Metagenome Rhizosphere
118 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
119 3300035116 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_3 Metagenome Rhizosphere
120 3300035117 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_N_1 Metagenome Rhizosphere
121 3300035170 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_1 Metagenome Rhizosphere
122 3300035171 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_4 Metagenome Rhizosphere
123 3300035692 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_11 Metagenome Rhizosphere
124 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
125 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
126 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
127 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
128 3300037853 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R8 v2 Metagenome Unclassified
129 3300039437 Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9 v2 Metagenome Unclassified
130 3300039438 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R1 v2 Metagenome Rhizosphere
131 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
132 3300042016 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512FE14Z071817_5357 Metagenome Rhizosphere
133 3300042439 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612FE14Z071817_5363 Metagenome Rhizosphere
134 3300042461 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0612LE14Z071817_5366 Metagenome Rhizosphere
135 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
136 3300042993 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z071817_5372 Metagenome Rhizosphere
137 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
138 3300045976 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA4R Metagenome Rhizosphere
139 3300046454 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-198-CL2_38_5 rhizosphere Metagenome Rhizosphere
140 3300046461 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL3_80_19 rhizosphere Metagenome Rhizosphere
141 3300046462 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-86-CL2_69_17 rhizosphere Metagenome Rhizosphere
142 3300046463 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL3_75_7 rhizosphere Metagenome Rhizosphere
143 3300046476 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-905-CL1_32_20 rhizosphere Metagenome Rhizosphere
144 3300046477 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-11047-CL1_23_5 rhizosphere Metagenome Rhizosphere
145 3300046511 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-331-CL2_55_18 rhizosphere Metagenome Rhizosphere
146 3300046515 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co2_62_25 rhizosphere Metagenome Rhizosphere
147 3300046516 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-448-CL1_35_3 rhizosphere Metagenome Rhizosphere
148 3300046529 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-866-CL2_50_11 rhizosphere Metagenome Rhizosphere
149 3300046533 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-845-CL2_37_16 rhizosphere Metagenome Rhizosphere
150 3300046536 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL2_62_7 rhizosphere Metagenome Rhizosphere
151 3300046559 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-4579-CL2_50_20 rhizosphere Metagenome Rhizosphere
152 3300046642 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL2_42_16 rhizosphere Metagenome Rhizosphere
153 3300046660 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-388-Co1_32_7 rhizosphere Metagenome Rhizosphere
154 3300046663 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-833-CL3_77_6 rhizosphere Metagenome Rhizosphere
155 3300046675 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-904-CL2_57_20 rhizosphere Metagenome Rhizosphere
156 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
157 3300046809 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-258-CL2_67_23 rhizosphere Metagenome Rhizosphere
158 3300047315 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL2_39_29 rhizosphere Metagenome Rhizosphere
159 3300047317 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL2_57_8 rhizosphere Metagenome Rhizosphere
160 3300047319 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL1_34_16 rhizosphere Metagenome Rhizosphere
161 3300047322 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWA-24-3-CL2_69_25 rhizosphere Metagenome Rhizosphere
162 3300047444 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - GW-9591-CL2_56_12 rhizosphere Metagenome Rhizosphere
163 3300047471 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - SKWD-24-1-CL2_58_25 rhizosphere Metagenome Rhizosphere
164 3300048088 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-285-CL2_56_7 rhizosphere Metagenome Rhizosphere
165 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
166 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
167 3300048912 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8w unlabeled Metagenome Rhizoplane
168 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
169 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
170 3300048925 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8x unlabeled Metagenome Unclassified
171 3300048926 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_8y unlabeled Metagenome Unclassified
172 3300048928 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW root_5e N15 Metagenome Unclassified
173 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
174 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
175 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
176 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
177 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
178 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
179 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
180 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
181 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
182 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
183 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
184 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
185 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
186 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
187 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
188 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
189 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
190 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
191 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
192 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
193 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
194 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
195 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
196 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
197 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
198 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
199 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
200 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
201 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
202 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
203 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
204 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
205 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
206 3300053087 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co3_14_51 endosphere Metagenome Endosphere
207 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
208 3300053120 Root microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 endosphere Metagenome Endosphere
209 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
210 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
211 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
212 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
213 641522639 Methylobacterium sp. 4-46 Isolate Nodule
214 643348564 Methylobacterium nodulans ORS 2060 Isolate Nodule

Type Distribution

Type Percentage (%)
Metagenomes 92.09
Metatranscriptomes 2.52
Isolates 5.4

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 1.08
Nodule 2.52
Rhizoplane 2.16
Rhizosphere 87.05
Stem 0
Stem Tuber 0.36
Unclassified 6.83

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0006777J48905_1019311 3300003308 Bacteria 4643
2 Ga0007417J51691_1017772 3300003544 Bacteria 9042
3 Ga0007410J51695_1019908 3300003574 Bacteria 9282
4 Ga0007409J51694_1014800 3300003575 Bacteria 4778
5 Ga0007416J51690_1014765 3300003577 Bacteria 6396
6 Ga0007429J51699_1026719 3300003579 Bacteria 5397
7 Ga0032354_1008844 3300003693 Bacteria 9871
8 Ga0070683_100113118 3300005329 Bacteria 2561
9 Ga0068869_100008827 3300005334 Bacteria 6521
10 Ga0070680_100105912 3300005336 Bacteria 2338
11 Ga0068868_100006842 3300005338 Bacteria 8097
12 Ga0070668_100009834 3300005347 Bacteria 7086
13 Ga0070668_100018788 3300005347 Bacteria 5191
14 Ga0070667_100000032 3300005367 Bacteria 176783
15 Ga0070714_100043529 3300005435 Bacteria 3797
16 Ga0070710_10010375 3300005437 Bacteria 4575
17 Ga0070711_100005762 3300005439 Bacteria 7433
18 Ga0070663_100008592 3300005455 Bacteria 6291
19 Ga0070678_100016739 3300005456 Bacteria 4699
20 Ga0070681_10026578 3300005458 Bacteria 5817
21 Ga0070685_10004133 3300005466 Bacteria 7322
22 Ga0070684_100039022 3300005535 Bacteria 4083
23 Ga0068853_100002477 3300005539 Bacteria 13832
24 Ga0070693_100017609 3300005547 Bacteria 3717
25 Ga0068855_100013714 3300005563 Bacteria 9771
26 Ga0068855_100064654 3300005563 Bacteria 4266
27 Ga0068854_100001794 3300005578 Bacteria 13083
28 Ga0068859_100000374 3300005617 Bacteria 44673
29 Ga0068859_100029856 3300005617 Bacteria 5470
30 Ga0068861_100023409 3300005719 Bacteria 4454
31 Ga0068858_100002426 3300005842 Bacteria 18879
32 Ga0068860_100003886 3300005843 Bacteria 15352
33 Ga0068862_100001735 3300005844 Bacteria 19712
34 Ga0068862_100023697 3300005844 Bacteria 5144
35 Ga0081455_10002074 3300005937 Bacteria 23900
36 Ga0081455_10014875 3300005937 Bacteria 7588
37 Ga0081455_10041729 3300005937 Bacteria 4032
38 Ga0081538_10002726 3300005981 Bacteria 16973
39 Ga0081538_10036500 3300005981 Bacteria 3205
40 Ga0081539_10006685 3300005985 Bacteria 10893
41 Ga0081539_10006819 3300005985 Bacteria 10697
42 Ga0070712_100006346 3300006175 Bacteria 7329
43 Ga0068871_100035151 3300006358 Bacteria 3980
44 Ga0068871_100041663 3300006358 Bacteria 3683
45 Ga0075428_100007631 3300006844 Bacteria 11990
46 Ga0075428_100014832 3300006844 Bacteria 8660
47 Ga0075430_100009462 3300006846 Bacteria 8235
48 Ga0075431_100019874 3300006847 Bacteria 6857
49 Ga0075433_10004529 3300006852 Bacteria 10839
50 Ga0075433_10041813 3300006852 Bacteria 3973
51 Ga0075434_100006806 3300006871 Bacteria 10513
52 Ga0075429_100111794 3300006880 Bacteria 2387
53 Ga0097620_100000374 3300006931 Bacteria 44673
54 Ga0097620_100029857 3300006931 Bacteria 5470
55 Ga0075435_100078288 3300007076 Bacteria 2711
56 Ga0105240_10017541 3300009093 Bacteria 9645
57 Ga0105240_10127404 3300009093 Bacteria 3057
58 Ga0111539_10016110 3300009094 Bacteria 9275
59 Ga0111539_10018965 3300009094 Bacteria 8505
60 Ga0111539_10057274 3300009094 Bacteria 4629
61 Ga0114129_10002006 3300009147 Bacteria 27880
62 Ga0105243_10009608 3300009148 Bacteria 7364
63 Ga0105248_10000143 3300009177 Bacteria 82037
64 Ga0105237_10000318 3300009545 Bacteria 67535
65 Ga0105238_10068051 3300009551 Bacteria 3562
66 Ga0105238_10123640 3300009551 Bacteria 2567
67 Ga0105249_10039143 3300009553 Bacteria 4305
68 Ga0105249_10049067 3300009553 Bacteria 3850
69 Ga0105239_10011063 3300010375 Bacteria 10074
70 Ga0105239_10223334 3300010375 Bacteria 2113
71 Ga0105246_10005639 3300011119 Bacteria 7636
72 Ga0105246_10075564 3300011119 Bacteria 2385
73 Ga0157370_10014066 3300013104 Bacteria 8211
74 Ga0157374_10048770 3300013296 Bacteria 3931
75 Ga0163162_10061774 3300013306 Bacteria 3785
76 Ga0157372_10019422 3300013307 Bacteria 7325
77 Ga0157372_10049950 3300013307 Bacteria 4653
78 Ga0157375_10113146 3300013308 Bacteria 2815
79 Ga0163163_10007039 3300014325 Bacteria 9883
80 Ga0157379_10033871 3300014968 Bacteria 4555
81 Ga0157376_10034152 3300014969 Bacteria 4104
82 Ga0163161_10058877 3300017792 Bacteria 2793
83 Ga0213875_10005202 3300021388 Bacteria 7032
84 Ga0213875_10006523 3300021388 Bacteria 6113
85 Ga0207688_10001798 3300025901 Bacteria 11401
86 Ga0207645_10002223 3300025907 Bacteria 15481
87 Ga0207695_10033684 3300025913 Bacteria 5581
88 Ga0207695_10104843 3300025913 Bacteria 2815
89 Ga0207693_10003269 3300025915 Bacteria 13878
90 Ga0207662_10050116 3300025918 Bacteria 2479
91 Ga0207694_10019104 3300025924 Bacteria 5180
92 Ga0207700_10068654 3300025928 Bacteria 2717
93 Ga0207690_10077938 3300025932 Bacteria 2305
94 Ga0207706_10001734 3300025933 Bacteria 21451
95 Ga0207706_10012993 3300025933 Bacteria 7578
96 Ga0207704_10002658 3300025938 Bacteria 8067
97 Ga0207691_10008966 3300025940 Bacteria 9595
98 Ga0207689_10029468 3300025942 Bacteria 4582
99 Ga0207661_10060747 3300025944 Bacteria 3051
100 Ga0207667_10013295 3300025949 Bacteria 9428
101 Ga0207712_10000294 3300025961 Bacteria 46986
102 Ga0207640_10087772 3300025981 Bacteria 2145
103 Ga0207658_10000755 3300025986 Bacteria 27821
104 Ga0207703_10000366 3300026035 Bacteria 48363
105 Ga0207678_10074001 3300026067 Bacteria 2919
106 Ga0207648_10001051 3300026089 Bacteria 30933
107 Ga0207648_10101543 3300026089 Bacteria 2521
108 Ga0207675_100007954 3300026118 Bacteria 10001
109 Ga0207675_100039113 3300026118 Bacteria 4427
110 Ga0207675_100080951 3300026118 Bacteria 3045
111 Ga0207683_10005194 3300026121 Bacteria 11182
112 Ga0207698_10003542 3300026142 Bacteria 9415
113 Ga0207698_10027678 3300026142 Bacteria 4029
114 Ga0209974_10007150 3300027876 Bacteria 3858
115 Ga0207428_10005076 3300027907 Bacteria 12361
116 Ga0207428_10005135 3300027907 Bacteria 12264
117 Ga0268265_10000703 3300028380 Bacteria 32896
118 Ga0268265_10025082 3300028380 Bacteria 4227
119 Ga0268264_10001313 3300028381 Bacteria 23419
120 Ga0268264_10030084 3300028381 Bacteria 4452
121 Ga0265330_10006726 3300031235 Bacteria 5668
122 Ga0307509_10000422 3300031507 Bacteria 71328
123 Ga0316575_10000042 3300031665 Bacteria 31213
124 Ga0307413_10021192 3300031824 Bacteria 3474
125 Ga0307406_10061635 3300031901 Bacteria 2423
126 Ga0307407_10011711 3300031903 Bacteria 4188
127 Ga0307412_10011839 3300031911 Bacteria 5064
128 Ga0307409_100044239 3300031995 Bacteria 3352
129 Ga0307416_100128229 3300032002 Bacteria 2277
130 Ga0307411_10011651 3300032005 Bacteria 4758
131 Ga0307411_10050568 3300032005 Bacteria 2707
132 Ga0307415_100031378 3300032126 Bacteria 3422
133 Ga0373934_0009142 3300035086 Bacteria 3708
134 Ga0373944_0000937 3300035089 Bacteria 7236
135 Ga0373923_0055760 3300035111 Bacteria 1667
136 Ga0373936_0000259 3300035113 Bacteria 17313
137 Ga0373936_0019612 3300035113 Bacteria 2621
138 Ga0373945_0030976 3300035116 Bacteria 1887
139 Ga0373953_0020309 3300035117 Bacteria 2482
140 Ga0373943_0029748 3300035170 Bacteria 2581
141 Ga0373946_0000047 3300035171 Bacteria 31827
142 Ga0373935_0018780 3300035692 Bacteria 4211
143 Ga0373927_0000128 3300035695 Bacteria 58077
144 Ga0373947_0000327 3300035725 Bacteria 26912
145 Ga0373937_0004049 3300036401 Bacteria 12415
146 Ga0373937_0213561 3300036401 Bacteria 1815
147 Ga0373925_0001723 3300037068 Bacteria 18387
148 Ga0436364_0130610 3300037853 Bacteria 38099
149 Ga0436364_0229352 3300037853 Bacteria 8809
150 Ga0436364_0444991 3300037853 Bacteria 6691
151 Ga0436364_0736730 3300037853 Bacteria 11757
152 Ga0436364_0948461 3300037853 Bacteria 8381
153 Ga0436365_0499337 3300039437 Bacteria 13450
154 Ga0436360_0349656 3300039438 Bacteria 3062
155 Ga0436361_0790664 3300039447 Bacteria 2438
156 Ga0439463_000516 3300042016 Bacteria 10855
157 Ga0439464_0005265 3300042439 Bacteria 3338
158 Ga0439464_0011316 3300042439 Bacteria 2363
159 Ga0439460_0000406 3300042461 Bacteria 9170
160 Ga0451577_0009534 3300042876 Bacteria 9340
161 Ga0439440_0000035 3300042993 Bacteria 16984
162 Ga0453683_0048164 3300044673 Bacteria 2674
163 Ga0466967_0006994 3300045976 Bacteria 8074
164 Ga0495592_0071317 3300046454 Bacteria 2529
165 Ga0495641_0012773 3300046461 Bacteria 4667
166 Ga0495651_0000410 3300046462 Bacteria 33253
167 Ga0495651_0088201 3300046462 Bacteria 2331
168 Ga0495653_0000327 3300046463 Bacteria 38827
169 Ga0495662_0004107 3300046476 Bacteria 7334
170 Ga0495664_0000805 3300046477 Bacteria 16059
171 Ga0495664_0021140 3300046477 Bacteria 3759
172 Ga0495608_0001588 3300046511 Bacteria 16250
173 Ga0495620_0016310 3300046515 Bacteria 3730
174 Ga0495628_0002472 3300046516 Bacteria 16662
175 Ga0495652_0000737 3300046529 Bacteria 37853
176 Ga0495652_0112565 3300046529 Bacteria 2186
177 Ga0495640_0052156 3300046533 Bacteria 2810
178 Ga0495587_0014168 3300046536 Bacteria 5007
179 Ga0495587_0082389 3300046536 Bacteria 1864
180 Ga0495667_0000765 3300046559 Bacteria 20641
181 Ga0495667_0032469 3300046559 Bacteria 3498
182 Ga0495667_0037359 3300046559 Bacteria 3237
183 Ga0495634_0060358 3300046642 Bacteria 2523
184 Ga0495625_0006321 3300046660 Bacteria 10590
185 Ga0495635_0006569 3300046663 Bacteria 8114
186 Ga0495635_0040528 3300046663 Bacteria 3218
187 Ga0495657_0001301 3300046675 Bacteria 21729
188 Ga0495657_0015532 3300046675 Bacteria 5569
189 Ga0495624_0071245 3300046690 Bacteria 2162
190 Ga0495600_0007099 3300046809 Bacteria 6845
191 Ga0495581_0011933 3300047315 Bacteria 5027
192 Ga0495604_0000720 3300047317 Bacteria 28031
193 Ga0495674_0001655 3300047319 Bacteria 21912
194 Ga0495680_0001260 3300047322 Bacteria 27628
195 Ga0495680_0009235 3300047322 Bacteria 8885
196 Ga0495680_0050105 3300047322 Bacteria 3266
197 Ga0495675_0008862 3300047444 Bacteria 6248
198 Ga0495684_0004089 3300047471 Bacteria 11392
199 Ga0495684_0019946 3300047471 Bacteria 5165
200 Ga0495602_0033839 3300048088 Bacteria 4788
201 Ga0496104_0015918 3300048907 Bacteria 6824
202 Ga0496108_0008411 3300048911 Bacteria 8374
203 Ga0496108_0070220 3300048911 Bacteria 2956
204 Ga0496109_0017676 3300048912 Bacteria 6255
205 Ga0496110_0012528 3300048913 Bacteria 6975
206 Ga0496112_0019683 3300048915 Bacteria 6377
207 Ga0496122_0000142 3300048925 Bacteria 168391
208 Ga0496123_0000148 3300048926 Bacteria 143265
209 Ga0496125_0000112 3300048928 Bacteria 188192
210 Ga0501032_0039456 3300049569 Bacteria 3211
211 Ga0501033_0000795 3300049570 Bacteria 28918
212 Ga0501034_0008425 3300049571 Bacteria 10890
213 Ga0501036_0001011 3300049572 Bacteria 21211
214 Ga0501036_0058643 3300049572 Bacteria 3261
215 Ga0501037_0009896 3300049573 Bacteria 6994
216 Ga0501037_0031340 3300049573 Bacteria 3925
217 Ga0501038_0003449 3300049574 Bacteria 14741
218 Ga0501038_0035983 3300049574 Bacteria 4345
219 Ga0501039_0000296 3300049575 Bacteria 35355
220 Ga0501039_0000799 3300049575 Bacteria 22654
221 Ga0501040_0000043 3300049576 Bacteria 58077
222 Ga0501041_0009657 3300049577 Bacteria 5688
223 Ga0501042_0000443 3300049578 Bacteria 21205
224 Ga0501042_0006870 3300049578 Bacteria 7424
225 Ga0501043_0025885 3300049579 Bacteria 4603
226 Ga0501043_0061201 3300049579 Bacteria 2956
227 Ga0501046_0000433 3300049580 Bacteria 41959
228 Ga0501046_0001096 3300049580 Bacteria 26487
229 Ga0501047_0111547 3300049581 Bacteria 2617
230 Ga0501048_0003985 3300049582 Bacteria 11214
231 Ga0501069_0042518 3300049585 Bacteria 2514
232 Ga0501071_0000125 3300049587 Bacteria 30943
233 Ga0501071_0005318 3300049587 Bacteria 8262
234 Ga0501072_0001151 3300049588 Bacteria 19661
235 Ga0501073_0004351 3300049589 Bacteria 10637
236 Ga0501074_0006201 3300049590 Bacteria 8628
237 Ga0501074_0019245 3300049590 Bacteria 4959
238 Ga0501074_0028057 3300049590 Bacteria 4080
239 Ga0501075_0000330 3300049591 Bacteria 26716
240 Ga0501076_0000564 3300049592 Bacteria 23626
241 Ga0501077_0001995 3300049593 Bacteria 12316
242 Ga0501079_0000798 3300049741 Bacteria 21451
243 Ga0501080_0007991 3300049742 Bacteria 9585
244 Ga0501080_0016003 3300049742 Bacteria 6921
245 Ga0501081_0000694 3300049743 Bacteria 19434
246 Ga0501045_0000058 3300049824 Bacteria 50547
247 nmdc:mga05p37_10965_c1 3300050507 Bacteria 10764
248 nmdc:mga05p37_27857_c1 3300050507 Bacteria 6884
249 nmdc:mga05p37_9889_c1 3300050507 Bacteria 11316
250 nmdc:mga09592_78743_c1 3300050508 Bacteria 2805
251 nmdc:mga0qj67_13710_c1 3300050509 Bacteria 6118
252 nmdc:mga06r32_14249_c1 3300050510 Bacteria 7210
253 nmdc:mga08y16_14513_c1 3300050511 Bacteria 8290
254 nmdc:mga08y16_35349_c1 3300050511 Bacteria 5246
255 nmdc:mga0n895_5440_c1 3300050512 Bacteria 10645
256 nmdc:mga0a205_3405_c1 3300050515 Bacteria 11273
257 Ga0500643_005489 3300053087 Bacteria 5457
258 Ga0500651_0001748 3300053093 Bacteria 11110
259 Ga0500597_001244 3300053120 Bacteria 6299
260 Ga0501084_0002985 3300054114 Bacteria 13696
261 Ga0590071_004875 3300059421 Bacteria 3239
262 Ga0501082_0000420 3300060353 Bacteria 37552
263 Ga0530510_0000061 3300061734 Bacteria 52912

MSA Aligner

Family Sequences

Sample Scaffold Protein Protein Length
1 3300035086 Ga0373934_0009142 Ga0373934_0009142_382_1857 471
2 3300035089 Ga0373944_0000937 Ga0373944_0000937_5427_6845 471
3 3300035111 Ga0373923_0055760 Ga0373923_0055760_146_1621 471
4 3300035113 Ga0373936_0000259 Ga0373936_0000259_12249_13667 471
5 3300035116 Ga0373945_0030976 Ga0373945_0030976_313_1731 471
6 3300035170 Ga0373943_0029748 Ga0373943_0029748_365_1783 471
7 3300035171 Ga0373946_0000047 Ga0373946_0000047_25101_26519 471
8 3300035692 Ga0373935_0018780 Ga0373935_0018780_1533_2951 471
9 3300035695 Ga0373927_0000128 Ga0373927_0000128_31319_32737 471
10 3300035725 Ga0373947_0000327 Ga0373947_0000327_23677_25095 471
11 3300036401 Ga0373937_0213561 Ga0373937_0213561_130_1605 471
12 3300037068 Ga0373925_0001723 Ga0373925_0001723_1550_2968 471
13 3300046454 Ga0495592_0071317 Ga0495592_0071317_310_1728 471
14 3300046461 Ga0495641_0012773 Ga0495641_0012773_1658_3076 471
15 3300046462 Ga0495651_0088201 Ga0495651_0088201_614_2089 471
16 3300046476 Ga0495662_0004107 Ga0495662_0004107_4261_5679 471
17 3300046477 Ga0495664_0000805 Ga0495664_0000805_11374_12792 471
18 3300046529 Ga0495652_0112565 Ga0495652_0112565_408_1883 471
19 3300046533 Ga0495640_0052156 Ga0495640_0052156_659_2077 471
20 3300046536 Ga0495587_0082389 Ga0495587_0082389_317_1735 471
21 3300046559 Ga0495667_0032469 Ga0495667_0032469_2041_3459 471
22 3300046559 Ga0495667_0037359 Ga0495667_0037359_680_2155 471
23 3300046642 Ga0495634_0060358 Ga0495634_0060358_615_2033 471
24 3300046663 Ga0495635_0006569 Ga0495635_0006569_6660_8078 471
25 3300046663 Ga0495635_0040528 Ga0495635_0040528_1106_2581 471
26 3300046675 Ga0495657_0015532 Ga0495657_0015532_2186_3604 471
27 3300046690 Ga0495624_0071245 Ga0495624_0071245_469_1887 471
28 3300047315 Ga0495581_0011933 Ga0495581_0011933_2991_4409 471
29 3300047319 Ga0495674_0001655 Ga0495674_0001655_9566_10984 471
30 3300047322 Ga0495680_0009235 Ga0495680_0009235_5011_6429 471
31 3300047322 Ga0495680_0050105 Ga0495680_0050105_1287_2762 471
32 3300047471 Ga0495684_0004089 Ga0495684_0004089_2056_3474 471
33 3300047471 Ga0495684_0019946 Ga0495684_0019946_961_2436 471
34 3300044673 Ga0453683_0048164 Ga0453683_0048164_1077_2642 484
35 3300010375 Ga0105239_10223334 Ga0105239_102233341 506
36 3300005985 Ga0081539_10006819 Ga0081539_100068196 519
37 3300009551 Ga0105238_10123640 Ga0105238_101236402 520
38 3300013307 Ga0157372_10049950 Ga0157372_100499504 520
39 3300005329 Ga0070683_100113118 Ga0070683_1001131182 524
40 3300026142 Ga0207698_10027678 Ga0207698_100276784 528
41 3300050507 nmdc:mga05p37_9889_c1 nmdc:mga05p37_9889_c1_6413_8134 529
42 3300031235 Ga0265330_10006726 Ga0265330_100067265 545
43 3300006358 Ga0068871_100035151 Ga0068871_1000351513 549
44 3300014969 Ga0157376_10034152 Ga0157376_100341522 549
45 3300005563 Ga0068855_100064654 Ga0068855_1000646543 551
46 3300005844 Ga0068862_100001735 Ga0068862_10000173512 551
47 3300013104 Ga0157370_10014066 Ga0157370_100140664 551
48 3300013308 Ga0157375_10113146 Ga0157375_101131462 551
49 3300025913 Ga0207695_10104843 Ga0207695_101048432 551
50 3300028380 Ga0268265_10000703 Ga0268265_1000070331 551
51 3300028381 Ga0268264_10030084 Ga0268264_100300843 551
52 3300005617 Ga0068859_100000374 Ga0068859_10000037443 552
53 3300006931 Ga0097620_100000374 Ga0097620_10000037443 552
54 3300009094 Ga0111539_10057274 Ga0111539_100572742 552
55 3300009551 Ga0105238_10068051 Ga0105238_100680514 552
56 3300025924 Ga0207694_10019104 Ga0207694_100191044 552
57 3300042876 Ga0451577_0009534 Ga0451577_0009534_5853_7721 552
58 3300049569 Ga0501032_0039456 Ga0501032_0039456_375_2204 552
59 3300049570 Ga0501033_0000795 Ga0501033_0000795_21814_23643 552
60 3300049571 Ga0501034_0008425 Ga0501034_0008425_6359_8188 552
61 3300049572 Ga0501036_0058643 Ga0501036_0058643_1285_3114 552
62 3300049573 Ga0501037_0009896 Ga0501037_0009896_297_2126 552
63 3300049574 Ga0501038_0003449 Ga0501038_0003449_9735_11564 552
64 3300049575 Ga0501039_0000799 Ga0501039_0000799_5534_7363 552
65 3300049578 Ga0501042_0006870 Ga0501042_0006870_2524_4401 552
66 3300049579 Ga0501043_0061201 Ga0501043_0061201_303_2132 552
67 3300049580 Ga0501046_0000433 Ga0501046_0000433_25291_27120 552
68 3300049581 Ga0501047_0111547 Ga0501047_0111547_545_2374 552
69 3300049590 Ga0501074_0028057 Ga0501074_0028057_181_2010 552
70 3300050511 nmdc:mga08y16_35349_c1 nmdc:mga08y16_35349_c1_423_2222 552
71 3300026067 Ga0207678_10074001 Ga0207678_100740012 553
72 3300025981 Ga0207640_10087772 Ga0207640_100877721 554
73 3300037853 Ga0436364_0444991 Ga0436364_0444991_3961_5847 554
74 3300031901 Ga0307406_10061635 Ga0307406_100616352 555
75 3300031903 Ga0307407_10011711 Ga0307407_100117112 555
76 3300032005 Ga0307411_10011651 Ga0307411_100116515 555
77 3300049590 Ga0501074_0006201 Ga0501074_0006201_1465_3276 555
78 3300031665 Ga0316575_10000042 Ga0316575_100000423 556
79 3300049587 Ga0501071_0005318 Ga0501071_0005318_3387_5201 557
80 3300049589 Ga0501073_0004351 Ga0501073_0004351_6346_8160 557
81 3300049742 Ga0501080_0007991 Ga0501080_0007991_817_2631 557
82 3300039437 Ga0436365_0499337 Ga0436365_0499337_4706_6688 558
83 3300046660 Ga0495625_0006321 Ga0495625_0006321_7984_9777 558
84 3300005347 Ga0070668_100018788 Ga0070668_1000187884 559
85 3300005843 Ga0068860_100003886 Ga0068860_1000038863 560
86 3300028381 Ga0268264_10001313 Ga0268264_100013138 560
87 3300045976 Ga0466967_0006994 Ga0466967_0006994_5635_7449 560
88 3300013306 Ga0163162_10061774 Ga0163162_100617741 562
89 3300007076 Ga0075435_100078288 Ga0075435_1000782881 564
90 3300049574 Ga0501038_0035983 Ga0501038_0035983_2420_4246 564
91 3300005563 Ga0068855_100013714 Ga0068855_1000137149 565
92 3300009093 Ga0105240_10017541 Ga0105240_100175419 565
93 3300009093 Ga0105240_10127404 Ga0105240_101274042 565
94 3300025913 Ga0207695_10033684 Ga0207695_100336843 565
95 3300025949 Ga0207667_10013295 Ga0207667_100132958 565
96 3300031507 Ga0307509_10000422 Ga0307509_1000042246 566
97 3300042439 Ga0439464_0011316 Ga0439464_0011316_351_2237 566
98 3300048925 Ga0496122_0000142 Ga0496122_0000142_61463_63418 566
99 3300048926 Ga0496123_0000148 Ga0496123_0000148_51546_53501 566
100 3300005842 Ga0068858_100002426 Ga0068858_1000024267 569
101 3300026035 Ga0207703_10000366 Ga0207703_1000036622 569
102 3300048928 Ga0496125_0000112 Ga0496125_0000112_142293_144404 569
103 3300006844 Ga0075428_100014832 Ga0075428_1000148328 570
104 3300005547 Ga0070693_100017609 Ga0070693_1000176093 571
105 3300006358 Ga0068871_100041663 Ga0068871_1000416632 571
106 3300026142 Ga0207698_10003542 Ga0207698_100035422 571
107 3300048913 Ga0496110_0012528 Ga0496110_0012528_1238_3109 571
108 3300005981 Ga0081538_10036500 Ga0081538_100365001 572
109 3300006847 Ga0075431_100019874 Ga0075431_1000198745 574
110 3300050510 nmdc:mga06r32_14249_c1 nmdc:mga06r32_14249_c1_2429_4369 574
111 3300053093 Ga0500651_0001748 Ga0500651_0001748_3408_5294 574
112 iso_pu_bacteria 2855020534 2855022121 574
113 3300025961 Ga0207712_10000294 Ga0207712_1000029435 577
114 iso_pu_bacteria 2713897090 2715500051 577
115 3300005336 Ga0070680_100105912 Ga0070680_1001059122 578
116 3300005458 Ga0070681_10026578 Ga0070681_100265783 578
117 3300035113 Ga0373936_0019612 Ga0373936_0019612_738_2561 578
118 3300005334 Ga0068869_100008827 Ga0068869_1000088272 580
119 3300005338 Ga0068868_100006842 Ga0068868_1000068425 580
120 3300005347 Ga0070668_100009834 Ga0070668_1000098344 580
121 3300005455 Ga0070663_100008592 Ga0070663_1000085923 580
122 3300005456 Ga0070678_100016739 Ga0070678_1000167393 580
123 3300005466 Ga0070685_10004133 Ga0070685_100041333 580
124 3300005535 Ga0070684_100039022 Ga0070684_1000390222 580
125 3300005578 Ga0068854_100001794 Ga0068854_1000017942 580
126 3300005617 Ga0068859_100029856 Ga0068859_1000298563 580
127 3300006931 Ga0097620_100029857 Ga0097620_1000298573 580
128 3300009553 Ga0105249_10039143 Ga0105249_100391432 580
129 3300010375 Ga0105239_10011063 Ga0105239_100110638 580
130 3300011119 Ga0105246_10075564 Ga0105246_100755641 580
131 3300013296 Ga0157374_10048770 Ga0157374_100487702 580
132 3300013307 Ga0157372_10019422 Ga0157372_100194223 580
133 3300014968 Ga0157379_10033871 Ga0157379_100338712 580
134 3300025901 Ga0207688_10001798 Ga0207688_100017984 580
135 3300025918 Ga0207662_10050116 Ga0207662_100501162 580
136 3300025933 Ga0207706_10012993 Ga0207706_100129932 580
137 3300025942 Ga0207689_10029468 Ga0207689_100294682 580
138 3300025944 Ga0207661_10060747 Ga0207661_100607472 580
139 3300026118 Ga0207675_100080951 Ga0207675_1000809513 580
140 3300026121 Ga0207683_10005194 Ga0207683_100051943 580
141 3300028380 Ga0268265_10025082 Ga0268265_100250823 580
142 3300048911 Ga0496108_0070220 Ga0496108_0070220_688_2496 580
143 3300048912 Ga0496109_0017676 Ga0496109_0017676_3715_5523 580
144 iso_pu_bacteria 2545555834 2545675884 581
145 iso_pu_bacteria 641522639 641641528 581
146 3300005367 Ga0070667_100000032 Ga0070667_10000003214 584
147 3300005539 Ga0068853_100002477 Ga0068853_1000024774 584
148 3300009177 Ga0105248_10000143 Ga0105248_1000014320 584
149 3300009545 Ga0105237_10000318 Ga0105237_1000031826 584
150 3300025986 Ga0207658_10000755 Ga0207658_1000075514 584
151 3300049572 Ga0501036_0001011 Ga0501036_0001011_2482_4326 585
152 3300049573 Ga0501037_0031340 Ga0501037_0031340_61_1905 585
153 3300049575 Ga0501039_0000296 Ga0501039_0000296_4275_6119 585
154 3300049576 Ga0501040_0000043 Ga0501040_0000043_41768_43612 585
155 3300049577 Ga0501041_0009657 Ga0501041_0009657_1656_3500 585
156 3300049578 Ga0501042_0000443 Ga0501042_0000443_203_2047 585
157 3300049579 Ga0501043_0025885 Ga0501043_0025885_2313_4157 585
158 3300049580 Ga0501046_0001096 Ga0501046_0001096_10774_12618 585
159 3300049582 Ga0501048_0003985 Ga0501048_0003985_2468_4312 585
160 3300049585 Ga0501069_0042518 Ga0501069_0042518_554_2398 585
161 3300049587 Ga0501071_0000125 Ga0501071_0000125_28155_29999 585
162 3300049588 Ga0501072_0001151 Ga0501072_0001151_2318_4162 585
163 3300049590 Ga0501074_0019245 Ga0501074_0019245_2327_4171 585
164 3300049591 Ga0501075_0000330 Ga0501075_0000330_21730_23574 585
165 3300049592 Ga0501076_0000564 Ga0501076_0000564_4055_5899 585
166 3300049593 Ga0501077_0001995 Ga0501077_0001995_594_2438 585
167 3300049741 Ga0501079_0000798 Ga0501079_0000798_9729_11573 585
168 3300049742 Ga0501080_0016003 Ga0501080_0016003_3854_5698 585
169 3300049743 Ga0501081_0000694 Ga0501081_0000694_17077_18921 585
170 3300049824 Ga0501045_0000058 Ga0501045_0000058_44818_46662 585
171 3300054114 Ga0501084_0002985 Ga0501084_0002985_9428_11272 585
172 3300060353 Ga0501082_0000420 Ga0501082_0000420_13475_15319 585
173 3300061734 Ga0530510_0000061 Ga0530510_0000061_4275_6119 585
174 iso_pu_bacteria 643348564 643604747 589
175 3300005719 Ga0068861_100023409 Ga0068861_1000234093 590
176 3300005844 Ga0068862_100023697 Ga0068862_1000236972 590
177 3300006880 Ga0075429_100111794 Ga0075429_1001117942 590
178 3300009094 Ga0111539_10018965 Ga0111539_100189654 590
179 3300025907 Ga0207645_10002223 Ga0207645_100022237 590
180 3300025933 Ga0207706_10001734 Ga0207706_100017349 590
181 3300025940 Ga0207691_10008966 Ga0207691_100089662 590
182 3300026089 Ga0207648_10001051 Ga0207648_1000105113 590
183 3300026118 Ga0207675_100007954 Ga0207675_1000079546 590
184 3300027876 Ga0209974_10007150 Ga0209974_100071502 590
185 3300050508 nmdc:mga09592_78743_c1 nmdc:mga09592_78743_c1_21_1931 590
186 iso_pu_bacteria 3003665799 3003666562 590
187 3300053087 Ga0500643_005489 Ga0500643_005489_1136_2986 591
188 3300053120 Ga0500597_001244 Ga0500597_001244_954_2804 591
189 iso_pu_bacteria 2738541281 2738744854 591
190 iso_pu_bacteria 2738543032 2739354084 591
191 iso_pu_bacteria 2919513703 2919517073 592
192 iso_pu_bacteria 2919675420 2919678951 592
193 3300046477 Ga0495664_0021140 Ga0495664_0021140_659_2734 602
194 3300047322 Ga0495680_0001260 Ga0495680_0001260_24979_27054 602
195 3300006852 Ga0075433_10041813 Ga0075433_100418132 603
196 3300027907 Ga0207428_10005135 Ga0207428_100051357 603
197 3300036401 Ga0373937_0004049 Ga0373937_0004049_3338_5413 603
198 3300046462 Ga0495651_0000410 Ga0495651_0000410_24756_26831 603
199 3300046463 Ga0495653_0000327 Ga0495653_0000327_24741_26816 603
200 3300046511 Ga0495608_0001588 Ga0495608_0001588_8933_11008 603
201 3300046516 Ga0495628_0002472 Ga0495628_0002472_2402_4477 603
202 3300046529 Ga0495652_0000737 Ga0495652_0000737_23997_26072 603
203 3300046536 Ga0495587_0014168 Ga0495587_0014168_1832_3907 603
204 3300046559 Ga0495667_0000765 Ga0495667_0000765_6873_8948 603
205 3300046675 Ga0495657_0001301 Ga0495657_0001301_6438_8513 603
206 3300046809 Ga0495600_0007099 Ga0495600_0007099_775_2850 603
207 3300047317 Ga0495604_0000720 Ga0495604_0000720_508_2583 603
208 3300047444 Ga0495675_0008862 Ga0495675_0008862_3426_5501 603
209 3300048088 Ga0495602_0033839 Ga0495602_0033839_551_2626 603
210 3300050507 nmdc:mga05p37_27857_c1 nmdc:mga05p37_27857_c1_2917_4980 603
211 3300050511 nmdc:mga08y16_14513_c1 nmdc:mga08y16_14513_c1_4317_6386 603
212 3300035117 Ga0373953_0020309 Ga0373953_0020309_53_2128 606
213 3300011119 Ga0105246_10005639 Ga0105246_100056394 611
214 3300009553 Ga0105249_10049067 Ga0105249_100490673 612
215 3300014325 Ga0163163_10007039 Ga0163163_100070394 612
216 3300017792 Ga0163161_10058877 Ga0163161_100588772 612
217 3300026089 Ga0207648_10101543 Ga0207648_101015432 612
218 3300026118 Ga0207675_100039113 Ga0207675_1000391131 612
219 3300039438 Ga0436360_0349656 Ga0436360_0349656_807_2864 612
220 3300048907 Ga0496104_0015918 Ga0496104_0015918_2740_4794 612
221 3300048911 Ga0496108_0008411 Ga0496108_0008411_1838_3892 612
222 3300006844 Ga0075428_100007631 Ga0075428_1000076313 615
223 3300006852 Ga0075433_10004529 Ga0075433_100045295 615
224 3300006871 Ga0075434_100006806 Ga0075434_1000068065 615
225 3300009148 Ga0105243_10009608 Ga0105243_100096082 615
226 3300021388 Ga0213875_10006523 Ga0213875_100065233 615
227 3300025932 Ga0207690_10077938 Ga0207690_100779382 615
228 3300025938 Ga0207704_10002658 Ga0207704_100026583 615
229 3300027907 Ga0207428_10005076 Ga0207428_100050765 615
230 3300037853 Ga0436364_0948461 Ga0436364_0948461_4825_6876 615
231 3300046515 Ga0495620_0016310 Ga0495620_0016310_637_2691 615
232 3300050507 nmdc:mga05p37_10965_c1 nmdc:mga05p37_10965_c1_3947_6004 615
233 3300050512 nmdc:mga0n895_5440_c1 nmdc:mga0n895_5440_c1_6269_8326 615
234 3300050515 nmdc:mga0a205_3405_c1 nmdc:mga0a205_3405_c1_6673_8730 615
235 3300009094 Ga0111539_10016110 Ga0111539_100161103 616
236 3300009147 Ga0114129_10002006 Ga0114129_100020064 616
237 3300032005 Ga0307411_10050568 Ga0307411_100505682 617
238 3300031824 Ga0307413_10021192 Ga0307413_100211922 618
239 3300031911 Ga0307412_10011839 Ga0307412_100118392 618
240 3300005937 Ga0081455_10014875 Ga0081455_100148757 619
241 3300005937 Ga0081455_10041729 Ga0081455_100417292 619
242 3300005937 Ga0081455_10002074 Ga0081455_100020747 620
243 3300048915 Ga0496112_0019683 Ga0496112_0019683_166_2220 620
244 3300031995 Ga0307409_100044239 Ga0307409_1000442391 625
245 3300032126 Ga0307415_100031378 Ga0307415_1000313782 626
246 3300059421 Ga0590071_004875 Ga0590071_004875_659_2734 626
247 3300005435 Ga0070714_100043529 Ga0070714_1000435293 634
248 3300005437 Ga0070710_10010375 Ga0070710_100103754 634
249 3300005439 Ga0070711_100005762 Ga0070711_1000057622 634
250 3300006175 Ga0070712_100006346 Ga0070712_1000063466 634
251 3300025915 Ga0207693_10003269 Ga0207693_100032699 634
252 3300025928 Ga0207700_10068654 Ga0207700_100686542 634
253 3300005981 Ga0081538_10002726 Ga0081538_100027267 636
254 iso_pu_bacteria 2643221579 2643908300 637
255 3300021388 Ga0213875_10005202 Ga0213875_100052022 640
256 3300037853 Ga0436364_0130610 Ga0436364_0130610_19575_21623 640
257 3300037853 Ga0436364_0229352 Ga0436364_0229352_3186_5246 640
258 3300005985 Ga0081539_10006685 Ga0081539_100066852 641
259 iso_pu_bacteria 2842333319 2842339376 641
260 3300006846 Ga0075430_100009462 Ga0075430_1000094623 642
261 3300042016 Ga0439463_000516 Ga0439463_000516_6613_8697 642
262 3300042439 Ga0439464_0005265 Ga0439464_0005265_783_2867 642
263 3300042461 Ga0439460_0000406 Ga0439460_0000406_4411_6495 642
264 3300042993 Ga0439440_0000035 Ga0439440_0000035_1834_3918 642
265 3300050509 nmdc:mga0qj67_13710_c1 nmdc:mga0qj67_13710_c1_719_2782 642
266 iso_pu_bacteria 2508501050 2508726447 642
267 iso_pu_bacteria 2775506901 2776266790 642
268 iso_pu_bacteria 2894232714 2894234829 642
269 3300032002 Ga0307416_100128229 Ga0307416_1001282291 644
270 3300037853 Ga0436364_0736730 Ga0436364_0736730_1594_3660 644
271 3300039447 Ga0436361_0790664 Ga0436361_0790664_308_2371 644
272 3300003308 Ga0006777J48905_1019311 Ga0006777J48905_10193112 645
273 3300003544 Ga0007417J51691_1017772 Ga0007417J51691_10177721 645
274 3300003574 Ga0007410J51695_1019908 Ga0007410J51695_10199082 645
275 3300003575 Ga0007409J51694_1014800 Ga0007409J51694_10148002 645
276 3300003577 Ga0007416J51690_1014765 Ga0007416J51690_10147652 645
277 3300003579 Ga0007429J51699_1026719 Ga0007429J51699_10267192 645
278 3300003693 Ga0032354_1008844 Ga0032354_10088442 645

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00364

Biotin_lipoyl

Biotin-requiring enzyme

112

184

0.98

PF02852

Pyr_redox_dim

Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain

583

692

0.98

PF00364

Biotin_lipoyl

Biotin-requiring enzyme

1

73

0.97

PF07992

Pyr_redox_2

Pyridine nucleotide-disulphide oxidoreductase

242

564

0.96

PF13450

NAD_binding_8

NAD(P)-binding Rossmann-like domain

246

284

0.95

PF00070

Pyr_redox

Pyridine nucleotide-disulphide oxidoreductase

413

493

0.94

PF00890

FAD_binding_2

FAD binding domain

243

283

0.92

PF13533

Biotin_lipoyl_2

Biotin-lipoyl like

42

78

0.91

PF12831

FAD_oxidored

FAD dependent oxidoreductase

243

305

0.89

PF13533

Biotin_lipoyl_2

Biotin-lipoyl like

152

195

0.88

PF01134

GIDA

Glucose inhibited division protein A

243

320

0.87

PF13738

Pyr_redox_3

Pyridine nucleotide-disulphide oxidoreductase

346

548

0.8

Structural Annotation

Top 5 Hits

ID Description Score Start End
1bhy-assembly1.cif.gz_A-2 low temperature middle resolution structure of p64k from masc data 0.9563 177 644
1ojt-assembly1.cif.gz_A-2 structure of dihydrolipoamide dehydrogenase 0.9555 177 644
5u25-assembly1.cif.gz_A-2 crystal structure of a dihydrolipoyl dehydrogenase from neisseria gonorrhoeae bound to fad 0.9547 176 641
4jq9-assembly1.cif.gz_A dihydrolipoyl dehydrogenase of escherichia coli pyruvate dehydrogenase complex 0.9541 174 645
4jq9-assembly1.cif.gz_A dihydrolipoyl dehydrogenase of escherichia coli pyruvate dehydrogenase complex 0.9521 174 645
ID Description Score Start End Superfamily
af_P06959_1_78_2.40.50.100 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.973 2 80 2.40.50.100
af_A0A0R0IYA2_303_457_3.40.50.720 Alpha Beta;3-Layer(aba) Sandwich;Rossmann fold;NAD(P)-binding Rossmann-like Domain 0.968 349 377 3.40.50.720
1ebdB01 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9653 177 516 3.50.50.60
5u25A02 Alpha Beta;3-Layer(bba) Sandwich;FAD/NAD(P)-binding domain;FAD/NAD(P)-binding domain 0.9632 323 444 3.50.50.60
af_P06959_1_78_2.40.50.100 Mainly Beta;Beta Barrel;OB fold (Dihydrolipoamide Acetyltransferase, E2P);RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.9609 2 80 2.40.50.100
ID Description Score Start End GO Terms
AF-A0A202C4N5-F1-model_v4 Dihydrolipoamide dehydrogenase 0.9772 514 592 GO:0004148
GO:0006090
GO:0006103
GO:0050660
AF-A0A352MM64-F1-model_v4 deleted 0.9691 178 554
AF-A0A7Z9HVS4-F1-model_v4 FAD-dependent oxidoreductase 0.9644 174 428 GO:0004148
GO:0006090
GO:0006103
GO:0050660
AF-A0A2E6YEA2-F1-model_v4 Dihydrolipoamide dehydrogenase 0.9632 169 504 GO:0004148
GO:0006090
GO:0006103
GO:0050660
AF-A0A661F588-F1-model_v4 Dihydrolipoyl dehydrogenase (EC 1.8.1.4) 0.9571 241 644 GO:0004148
GO:0006090
GO:0006103
GO:0050660

Feature Viewer

pLDDT pTM Quality
83.29 0.69 Medium
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Predicted Structure (AlphaFold2)

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