F381615

General Info

Members Datasets Scaffolds Average Seq Length
277 190 554 198

Family's Representative Sequence

Representative Sequence 3300005435|Ga0070714_100509823|Ga0070714_1005098231
Length 230
Sequence MELARVNRHLNRQNQHNRDVSEHLSLMFTGLVEGLGAISEAALNGPGKRLVIVPPAALLPGTAIGQSVAINGCCLTVIAAEAGCWTFEAGPETLARTNLGSLRPGDRVNLERALTANARLGGHFVQGHIDGCGTVDRILSDGAWVTIWFCAARELTSQMVSKGSVAVDGVSLTLVEVEDQRFSVALIPHTLEVTTLGTRRERDRVNIESDILAKYVQKMLAASAMSRPSI

Samples

Sample ID Description Type Environment
1 3300005435 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG Metagenome Rhizosphere
2 3300002155 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX- M7 Metagenome Rhizosphere
3 3300003320 Sugarcane root Sample H2 Metagenome Unclassified
4 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
5 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
6 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
7 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
10 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
11 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
12 3300005365 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG Metagenome Rhizosphere
13 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
14 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
15 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
16 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
17 3300005530 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG Metagenome Rhizosphere
18 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
19 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
20 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
21 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
22 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
23 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
24 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
25 3300005614 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 Metagenome Rhizosphere
26 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
27 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
28 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
29 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
30 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
31 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
32 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
33 3300006058 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 Metagenome Rhizosphere
34 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
35 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
36 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
37 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
38 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
39 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
40 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
41 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
42 3300006880 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 Metagenome Rhizosphere
43 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
44 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
45 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
46 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
47 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
48 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
49 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
50 3300009551 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG Metagenome Rhizosphere
51 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
52 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
53 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
54 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
55 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
56 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
57 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
58 3300021361 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 Metagenome Rhizosphere
59 3300025901 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes) (version 2) Metagenome Rhizosphere
60 3300025906 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
61 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
62 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
63 3300025924 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
64 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
65 3300025932 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
66 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
67 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
74 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
76 3300026078 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes) (version 2) Metagenome Rhizosphere
77 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
79 3300027360 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 PM (SPAdes) (version 2) Metagenome Rhizosphere
80 3300027378 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 PM (SPAdes) (version 2) Metagenome Rhizosphere
81 3300027395 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 PM (SPAdes) (version 2) Metagenome Rhizosphere
82 3300027424 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M2 S PM (SPAdes) (version 2) Metagenome Rhizosphere
83 3300027462 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant Co PM (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027471 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 AM (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027665 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 S PM (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027682 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes) (version 2) Metagenome Rhizosphere
87 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
88 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
89 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
91 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
92 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
93 3300031090 Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZI1 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
94 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
95 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
96 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
97 3300031665 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_050615r2r3 Metagenome Rhizosphere
98 3300031691 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J5-7_160517rDrA Metagenome Rhizosphere
99 3300031728 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_160517rDrC Metagenome Rhizosphere
100 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
101 3300031733 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S5-7_050615r2r1 Metagenome Rhizosphere
102 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
103 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
104 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
105 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
106 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
107 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
108 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
109 3300032139 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB Metagenome Rhizosphere
110 3300033524 Metatranscriptome of rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S0-2_160517rDrB (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
111 3300035092 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_11 Metagenome Rhizosphere
112 3300035113 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_12 Metagenome Rhizosphere
113 3300035398 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - J0-2_050615r2r1 Metagenome Rhizosphere
114 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
115 3300036712 Rhizosphere microbial communities from salt marsh grasses in Alabama, United States - S_170502SBrCrA Metagenome Rhizosphere
116 3300037312 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_B SG_2 Metagenome Rhizosphere
117 3300037418 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_C SG_3 Metagenome Rhizosphere
118 3300037466 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_A SG_1 Metagenome Rhizosphere
119 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
120 3300039447 Rhizosphere microbial communities from Vellozia epidendroides in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R2 v2 Metagenome Rhizosphere
121 3300042005 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0512LE14Z062817_5216 Metagenome Rhizosphere
122 3300042876 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9GH_GED Metagenome Rhizosphere
123 3300044842 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - CSA2R Metagenome Rhizosphere
124 3300046457 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-133-Co2_50_25 rhizosphere Metagenome Rhizosphere
125 3300046491 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-13-Co2_41_23 rhizosphere Metagenome Rhizosphere
126 3300046525 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 rhizosphere Metagenome Rhizosphere
127 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
128 3300046664 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-904-Co1_5_9 rhizosphere Metagenome Rhizosphere
129 3300046674 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-133-CL3_93_10 rhizosphere Metagenome Rhizosphere
130 3300046689 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-351-CL2_54_28 rhizosphere Metagenome Rhizosphere
131 3300046690 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-388-CL3_88_3 rhizosphere Metagenome Rhizosphere
132 3300048907 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR rhizoplane_2c N15 Metagenome Rhizoplane
133 3300048913 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4c N15 Metagenome Rhizoplane
134 3300048914 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_4d N15 Metagenome Rhizoplane
135 3300048915 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5c N15 Metagenome Rhizoplane
136 3300048916 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_5d N15 Metagenome Rhizoplane
137 3300048918 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_6d N15 Metagenome Rhizoplane
138 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
139 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049572 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_03 Metagenome Rhizosphere
143 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
144 3300049574 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_02 Metagenome Rhizosphere
145 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
146 3300049576 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_01 Metagenome Rhizosphere
147 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
148 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
149 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
150 3300049580 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_01 Metagenome Rhizosphere
151 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
152 3300049582 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_03 Metagenome Rhizosphere
153 3300049583 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_01 Metagenome Rhizosphere
154 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
155 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
156 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
157 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
158 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
159 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
160 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
161 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
162 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
163 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
164 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
165 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
166 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
167 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
168 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
169 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
170 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
171 3300050489 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-2 re-annotation Metagenome Endosphere
172 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
173 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
174 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
175 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
176 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
177 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
178 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
179 3300053083 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-866-Co2_58_19 rhizosphere Metagenome Rhizosphere
180 3300053093 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-9591-Co2_62_24 endosphere Metagenome Endosphere
181 3300053124 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co3_28_42 endosphere Metagenome Endosphere
182 3300053146 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-351-Co2_42_17 endosphere Metagenome Endosphere
183 3300053153 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-845-Co2_60_28 endosphere Metagenome Endosphere
184 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
185 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
186 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere
187 2524614857 Deinococcus ficus DSM 19119 Isolate Rhizosphere
188 2526164512 Azovibrio restrictus DSM 23866 Isolate Unclassified
189 2687453341 Pirellula sp. SH-Sr6A Isolate Unclassified
190 2739367875 Deinococcus ficus CC-FR2-10 Isolate Unclassified

Type Distribution

Type Percentage (%)
Metagenomes 97.83
Metatranscriptomes 0.72
Isolates 1.44

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 2.17
Nodule 0
Rhizoplane 2.53
Rhizosphere 93.14
Stem 0
Stem Tuber 0
Unclassified 4.33

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0070714_100509823 3300005435 Bacteria 1148
2 JGI24033J26618_1000002 3300002155 Bacteria 48750
3 rootH2_10000704 3300003320 Bacteria 31849
4 rootL2_10189975 3300003322 Bacteria 2839
5 rootH1_10051568 3300003323 Bacteria 17716
6 Ga0070683_100010618 3300005329 Bacteria 7916
7 Ga0070683_100015925 3300005329 Bacteria 6615
8 Ga0070670_100307663 3300005331 Bacteria 1387
9 Ga0068869_100663706 3300005334 Bacteria 886
10 Ga0068868_100419973 3300005338 Bacteria 1158
11 Ga0070661_100000717 3300005344 Bacteria 24279
12 Ga0070673_100822911 3300005364 Unclassified 858
13 Ga0070688_100273964 3300005365 Unclassified 1210
14 Ga0070659_100025355 3300005366 Bacteria 4553
15 Ga0070659_101143443 3300005366 Bacteria 687
16 Ga0070709_10000700 3300005434 Bacteria 19086
17 Ga0070678_100030295 3300005456 Bacteria 3718
18 Ga0070678_101466258 3300005456 Bacteria 638
19 Ga0070685_10327992 3300005466 Bacteria 1040
20 Ga0070679_100751416 3300005530 Bacteria 918
21 Ga0070684_100000919 3300005535 Bacteria 20910
22 Ga0070684_100002580 3300005535 Bacteria 13382
23 Ga0070684_100114891 3300005535 Bacteria 2417
24 Ga0068853_100041417 3300005539 Bacteria 3934
25 Ga0070665_100000417 3300005548 Bacteria 62091
26 Ga0070704_100604914 3300005549 Bacteria 964
27 Ga0068855_100232338 3300005563 Unclassified 2064
28 Ga0068855_100250884 3300005563 Bacteria 1974
29 Ga0070664_100074303 3300005564 Bacteria 2917
30 Ga0070664_100150319 3300005564 Bacteria 2055
31 Ga0070664_101334096 3300005564 Bacteria 678
32 Ga0068857_100136971 3300005577 Bacteria 2211
33 Ga0068856_100000171 3300005614 Bacteria 67598
34 Ga0068856_100743797 3300005614 Bacteria 1001
35 Ga0068859_100249379 3300005617 Bacteria 1866
36 Ga0068861_100030089 3300005719 Bacteria 3977
37 Ga0068860_100215738 3300005843 Bacteria 1862
38 Ga0068862_100121430 3300005844 Bacteria 2303
39 Ga0068862_100660166 3300005844 Bacteria 1009
40 Ga0081455_10001787 3300005937 Bacteria 25984
41 Ga0081455_10020477 3300005937 Bacteria 6225
42 Ga0081538_10010921 3300005981 Bacteria 7399
43 Ga0081538_10126726 3300005981 Bacteria 1212
44 Ga0081539_10040814 3300005985 Bacteria 2721
45 Ga0075432_10062710 3300006058 Bacteria 1326
46 Ga0075432_10089903 3300006058 Bacteria 1123
47 Ga0070716_100008232 3300006173 Bacteria 5167
48 Ga0070712_100404625 3300006175 Bacteria 1128
49 Ga0075366_10091632 3300006195 Bacteria 1821
50 Ga0075428_100002700 3300006844 Bacteria 19312
51 Ga0075428_100050517 3300006844 Bacteria 4560
52 Ga0075428_100065860 3300006844 Bacteria 3967
53 Ga0075428_100580602 3300006844 Bacteria 1198
54 Ga0075428_101278280 3300006844 Bacteria 772
55 Ga0075430_100000749 3300006846 Bacteria 24969
56 Ga0075430_100027875 3300006846 Bacteria 4797
57 Ga0075430_100059118 3300006846 Bacteria 3222
58 Ga0075430_100327737 3300006846 Bacteria 1266
59 Ga0075431_100002301 3300006847 Bacteria 18346
60 Ga0075431_100005511 3300006847 Bacteria 12499
61 Ga0075431_100159322 3300006847 Bacteria 2321
62 Ga0075431_100572727 3300006847 Bacteria 1115
63 Ga0075433_10162154 3300006852 Bacteria 1990
64 Ga0075433_10772885 3300006852 Bacteria 840
65 Ga0075434_100676725 3300006871 Bacteria 1050
66 Ga0075429_100000742 3300006880 Bacteria 25591
67 Ga0075429_100073402 3300006880 Bacteria 2980
68 Ga0068865_100312718 3300006881 Bacteria 1261
69 Ga0097620_100249398 3300006931 Bacteria 1866
70 Ga0075435_100635360 3300007076 Bacteria 926
71 Ga0111539_10078240 3300009094 Bacteria 3891
72 Ga0111539_10093481 3300009094 Bacteria 3533
73 Ga0111539_10142580 3300009094 Bacteria 2805
74 Ga0111539_10231124 3300009094 Bacteria 2153
75 Ga0111539_10945120 3300009094 Unclassified 1002
76 Ga0114129_10000484 3300009147 Bacteria 48049
77 Ga0114129_10137549 3300009147 Bacteria 3351
78 Ga0114129_11180506 3300009147 Bacteria 954
79 Ga0105243_10896160 3300009148 Bacteria 882
80 Ga0105242_10312018 3300009176 Bacteria 1439
81 Ga0105238_10045910 3300009551 Bacteria 4412
82 Ga0105249_10110116 3300009553 Bacteria 2602
83 Ga0157374_10063166 3300013296 Bacteria 3473
84 Ga0157378_10002361 3300013297 Bacteria 16786
85 Ga0157372_10235336 3300013307 Bacteria 2124
86 Ga0157375_10191440 3300013308 Bacteria 2200
87 Ga0157380_10145326 3300014326 Bacteria 2043
88 Ga0157380_10260293 3300014326 Unclassified 1575
89 Ga0157380_10330902 3300014326 Bacteria 1416
90 Ga0157380_10554255 3300014326 Bacteria 1128
91 Ga0157379_10740535 3300014968 Bacteria 925
92 Ga0213872_10000674 3300021361 Bacteria 25844
93 Ga0213872_10025480 3300021361 Bacteria 2718
94 Ga0207688_10145858 3300025901 Bacteria 1395
95 Ga0207699_10000518 3300025906 Bacteria 19122
96 Ga0207707_10418026 3300025912 Bacteria 1150
97 Ga0207649_10000667 3300025920 Bacteria 22923
98 Ga0207694_10024728 3300025924 Bacteria 4562
99 Ga0207650_10035363 3300025925 Unclassified 3626
100 Ga0207690_10011814 3300025932 Bacteria 5222
101 Ga0207686_10429060 3300025934 Bacteria 1013
102 Ga0207704_10157460 3300025938 Bacteria 1612
103 Ga0207689_10627705 3300025942 Bacteria 905
104 Ga0207661_10027996 3300025944 Bacteria 4312
105 Ga0207661_10091746 3300025944 Bacteria 2531
106 Ga0207679_10274808 3300025945 Bacteria 1442
107 Ga0207667_10218705 3300025949 Bacteria 1952
108 Ga0207667_10419645 3300025949 Bacteria 1361
109 Ga0207712_10065085 3300025961 Bacteria 2601
110 Ga0207712_10325901 3300025961 Bacteria 1269
111 Ga0207640_10212215 3300025981 Bacteria 1476
112 Ga0207677_10494218 3300026023 Bacteria 1056
113 Ga0207639_10052601 3300026041 Bacteria 3104
114 Ga0207639_10571477 3300026041 Bacteria 1040
115 Ga0207702_10000153 3300026078 Bacteria 80953
116 Ga0207674_10021599 3300026116 Bacteria 6929
117 Ga0207675_100018372 3300026118 Bacteria 6520
118 Ga0209969_1005492 3300027360 Bacteria 1779
119 Ga0209981_1006160 3300027378 Bacteria 1603
120 Ga0209996_1020624 3300027395 Bacteria 925
121 Ga0209984_1013432 3300027424 Bacteria 1075
122 Ga0210000_1009359 3300027462 Bacteria 1441
123 Ga0209995_1001023 3300027471 Bacteria 4296
124 Ga0209983_1009030 3300027665 Bacteria 2037
125 Ga0209971_1020760 3300027682 Bacteria 1562
126 Ga0209974_10027936 3300027876 Bacteria 1867
127 Ga0207428_10001286 3300027907 Bacteria 26827
128 Ga0207428_10142935 3300027907 Bacteria 1825
129 Ga0207428_10204114 3300027907 Bacteria 1487
130 Ga0268266_10000688 3300028379 Bacteria 45589
131 Ga0268266_10949928 3300028379 Unclassified 832
132 Ga0268265_10053773 3300028380 Unclassified 3052
133 Ga0268264_10399139 3300028381 Bacteria 1321
134 Ga0265338_10261630 3300028800 Bacteria 1272
135 Ga0265760_10026539 3300031090 Bacteria 1695
136 Ga0265325_10244456 3300031241 Bacteria 814
137 Ga0265327_10006266 3300031251 Bacteria 9583
138 Ga0307408_100233707 3300031548 Bacteria 1507
139 Ga0307408_100330866 3300031548 Bacteria 1286
140 Ga0307408_100690065 3300031548 Bacteria 917
141 Ga0316575_10192855 3300031665 Bacteria 847
142 Ga0316579_10179161 3300031691 Bacteria 1025
143 Ga0316578_10257935 3300031728 Bacteria 1045
144 Ga0307405_10210957 3300031731 Bacteria 1418
145 Ga0316577_10084892 3300031733 Bacteria 1772
146 Ga0307413_11301998 3300031824 Bacteria 636
147 Ga0307406_10116491 3300031901 Bacteria 1849
148 Ga0307406_10393137 3300031901 Bacteria 1097
149 Ga0307412_10195554 3300031911 Bacteria 1532
150 Ga0307412_10237095 3300031911 Bacteria 1409
151 Ga0307409_100062347 3300031995 Bacteria 2918
152 Ga0307409_100322131 3300031995 Bacteria 1447
153 Ga0307416_100028626 3300032002 Bacteria 4147
154 Ga0307416_100111140 3300032002 Bacteria 2415
155 Ga0307416_100656501 3300032002 Bacteria 1134
156 Ga0307416_101825358 3300032002 Unclassified 712
157 Ga0307411_10485554 3300032005 Bacteria 1041
158 Ga0307415_100088865 3300032126 Bacteria 2230
159 Ga0316580_10011089 3300032139 Bacteria 2731
160 Ga0316592_1055568 3300033524 Bacteria 886
161 Ga0373952_0012013 3300035092 Bacteria 1697
162 Ga0373936_0087389 3300035113 Bacteria 1304
163 Ga0316574_0025967 3300035398 Bacteria 3521
164 Ga0316574_0036226 3300035398 Bacteria 3020
165 Ga0316574_0144938 3300035398 Bacteria 1530
166 Ga0316574_0484751 3300035398 Bacteria 772
167 Ga0373947_0449888 3300035725 Bacteria 872
168 Ga0316584_0263773 3300036712 Bacteria 1255
169 Ga0395899_0000045 3300037312 Bacteria 247620
170 Ga0395899_0642989 3300037312 Bacteria 671
171 Ga0395900_0235531 3300037418 Bacteria 1839
172 Ga0395900_0293400 3300037418 Bacteria 1614
173 Ga0395898_0000057 3300037466 Bacteria 277915
174 Ga0395898_0406940 3300037466 Bacteria 1297
175 Ga0395901_0006873 3300038443 Bacteria 11494
176 Ga0395901_0105402 3300038443 Bacteria 2959
177 Ga0395901_0299000 3300038443 Bacteria 1669
178 Ga0436361_0648731 3300039447 Bacteria 8805
179 Ga0436361_0673583 3300039447 Bacteria 81650
180 Ga0436361_0906143 3300039447 Bacteria 8608
181 Ga0439448_0007458 3300042005 Bacteria 3172
182 Ga0451577_0042028 3300042876 Bacteria 4101
183 Ga0466957_0009951 3300044842 Bacteria 5440
184 Ga0495590_0101413 3300046457 Bacteria 1023
185 Ga0495584_0080493 3300046491 Bacteria 1639
186 Ga0495663_0108124 3300046525 Bacteria 922
187 Ga0495668_0408058 3300046616 Bacteria 747
188 Ga0495659_0220166 3300046664 Bacteria 784
189 Ga0495588_0209876 3300046674 Bacteria 1028
190 Ga0495613_0302904 3300046689 Bacteria 1106
191 Ga0495624_0266468 3300046690 Bacteria 1035
192 Ga0496104_0913497 3300048907 Bacteria 783
193 Ga0496110_0177505 3300048913 Bacteria 1934
194 Ga0496111_0190028 3300048914 Bacteria 1527
195 Ga0496112_0416441 3300048915 Bacteria 1283
196 Ga0496112_0828734 3300048915 Bacteria 849
197 Ga0496113_0130613 3300048916 Bacteria 1971
198 Ga0496115_0687469 3300048918 Bacteria 805
199 Ga0501031_0006464 3300049568 Bacteria 7640
200 Ga0501032_0000159 3300049569 Bacteria 54766
201 Ga0501033_0000007 3300049570 Bacteria 303981
202 Ga0501033_0017998 3300049570 Bacteria 5335
203 Ga0501034_0003832 3300049571 Bacteria 16947
204 Ga0501034_0221969 3300049571 Bacteria 1842
205 Ga0501034_0721475 3300049571 Bacteria 894
206 Ga0501036_0085006 3300049572 Bacteria 2674
207 Ga0501037_0052213 3300049573 Bacteria 2990
208 Ga0501037_0699108 3300049573 Bacteria 675
209 Ga0501038_0001059 3300049574 Bacteria 24818
210 Ga0501038_0009170 3300049574 Bacteria 9082
211 Ga0501039_0008993 3300049575 Bacteria 7607
212 Ga0501040_0001883 3300049576 Bacteria 13459
213 Ga0501041_0001122 3300049577 Bacteria 14677
214 Ga0501041_0073205 3300049577 Archaea 2106
215 Ga0501042_0018224 3300049578 Bacteria 4858
216 Ga0501042_0084210 3300049578 Bacteria 2280
217 Ga0501043_0012975 3300049579 Bacteria 6512
218 Ga0501046_0002818 3300049580 Bacteria 16195
219 Ga0501047_0714661 3300049581 Bacteria 819
220 Ga0501048_0007277 3300049582 Bacteria 8393
221 Ga0501067_0009393 3300049583 Bacteria 5418
222 Ga0501068_0226158 3300049584 Bacteria 1189
223 Ga0501069_0086093 3300049585 Bacteria 1774
224 Ga0501070_0068389 3300049586 Bacteria 2940
225 Ga0501070_0356932 3300049586 Bacteria 1186
226 Ga0501071_0000834 3300049587 Bacteria 16491
227 Ga0501072_0001786 3300049588 Bacteria 16004
228 Ga0501073_0067353 3300049589 Bacteria 2496
229 Ga0501074_0012435 3300049590 Bacteria 6185
230 Ga0501075_0012231 3300049591 Bacteria 6092
231 Ga0501075_0419114 3300049591 Bacteria 1021
232 Ga0501076_0001618 3300049592 Bacteria 15192
233 Ga0501076_0316426 3300049592 Bacteria 1280
234 Ga0501076_0686152 3300049592 Bacteria 845
235 Ga0501077_0009525 3300049593 Bacteria 6040
236 Ga0501079_0023491 3300049741 Bacteria 4731
237 Ga0501080_0019467 3300049742 Bacteria 6286
238 Ga0501080_0146018 3300049742 Bacteria 2186
239 Ga0501081_0003415 3300049743 Bacteria 10123
240 Ga0501083_0010081 3300049744 Bacteria 6661
241 Ga0501035_0004791 3300049822 Bacteria 12832
242 Ga0501035_0226688 3300049822 Bacteria 1594
243 Ga0501044_0231751 3300049823 Unclassified 1794
244 Ga0501045_0000598 3300049824 Bacteria 22698
245 nmdc:mga03683_167490_c1 3300050489 Bacteria 997
246 nmdc:mga05p37_31718_c1 3300050507 Bacteria 6458
247 nmdc:mga05p37_889_c1 3300050507 Bacteria 33704
248 nmdc:mga09592_14068_c1 3300050508 Bacteria 6534
249 nmdc:mga09592_360_c1 3300050508 Bacteria 33201
250 nmdc:mga0qj67_1326_c1 3300050509 Bacteria 17398
251 nmdc:mga0qj67_286382_c1 3300050509 Bacteria 1335
252 nmdc:mga0qj67_376405_c1 3300050509 Bacteria 1147
253 nmdc:mga0qj67_7453_c1 3300050509 Bacteria 8082
254 nmdc:mga06r32_1015_c1 3300050510 Bacteria 25208
255 nmdc:mga06r32_11588_c1 3300050510 Bacteria 7938
256 nmdc:mga06r32_155275_c1 3300050510 Bacteria 2270
257 nmdc:mga08y16_1236169_c1 3300050511 Unclassified 716
258 nmdc:mga08y16_184508_c1 3300050511 Bacteria 2165
259 nmdc:mga08y16_3804_c1 3300050511 Bacteria 15702
260 nmdc:mga08y16_400493_c1 3300050511 Bacteria 1405
261 nmdc:mga08y16_47133_c1 3300050511 Bacteria 4512
262 nmdc:mga0n895_47699_c1 3300050512 Bacteria 4189
263 nmdc:mga0a205_160866_c1 3300050515 Bacteria 2142
264 nmdc:mga0a205_80895_c1 3300050515 Bacteria 3139
265 Ga0495655_0012441 3300053083 Bacteria 1734
266 Ga0500651_0186148 3300053093 Unclassified 1231
267 Ga0500617_025082 3300053124 Bacteria 2647
268 Ga0500588_0017950 3300053146 Bacteria 1856
269 Ga0500616_0008414 3300053153 Bacteria 6410
270 Ga0501084_0042112 3300054114 Bacteria 3819
271 Ga0501082_0002396 3300060353 Bacteria 16440
272 Ga0530510_0009260 3300061734 Bacteria 6908
273 Ga0530510_0520537 3300061734 Bacteria 902
274 2526062255 2524614857 Bacteria 4146328
275 2526212008 2526164512 Bacteria 4025691
276 2688395327 2687453341 Bacteria 6534136
277 2740063600 2739367875 Bacteria 4157290
278 Ga0070714_100509823
279 JGI24033J26618_1000002
280 rootH2_10000704
281 rootL2_10189975
282 rootH1_10051568
283 Ga0070683_100010618
284 Ga0070683_100015925
285 Ga0070670_100307663
286 Ga0068869_100663706
287 Ga0068868_100419973
288 Ga0070661_100000717
289 Ga0070673_100822911
290 Ga0070688_100273964
291 Ga0070659_100025355
292 Ga0070659_101143443
293 Ga0070709_10000700
294 Ga0070678_100030295
295 Ga0070678_101466258
296 Ga0070685_10327992
297 Ga0070679_100751416
298 Ga0070684_100000919
299 Ga0070684_100002580
300 Ga0070684_100114891
301 Ga0068853_100041417
302 Ga0070665_100000417
303 Ga0070704_100604914
304 Ga0068855_100232338
305 Ga0068855_100250884
306 Ga0070664_100074303
307 Ga0070664_100150319
308 Ga0070664_101334096
309 Ga0068857_100136971
310 Ga0068856_100000171
311 Ga0068856_100743797
312 Ga0068859_100249379
313 Ga0068861_100030089
314 Ga0068860_100215738
315 Ga0068862_100121430
316 Ga0068862_100660166
317 Ga0081455_10001787
318 Ga0081455_10020477
319 Ga0081538_10010921
320 Ga0081538_10126726
321 Ga0081539_10040814
322 Ga0075432_10062710
323 Ga0075432_10089903
324 Ga0070716_100008232
325 Ga0070712_100404625
326 Ga0075366_10091632
327 Ga0075428_100002700
328 Ga0075428_100050517
329 Ga0075428_100065860
330 Ga0075428_100580602
331 Ga0075428_101278280
332 Ga0075430_100000749
333 Ga0075430_100027875
334 Ga0075430_100059118
335 Ga0075430_100327737
336 Ga0075431_100002301
337 Ga0075431_100005511
338 Ga0075431_100159322
339 Ga0075431_100572727
340 Ga0075433_10162154
341 Ga0075433_10772885
342 Ga0075434_100676725
343 Ga0075429_100000742
344 Ga0075429_100073402
345 Ga0068865_100312718
346 Ga0097620_100249398
347 Ga0075435_100635360
348 Ga0111539_10078240
349 Ga0111539_10093481
350 Ga0111539_10142580
351 Ga0111539_10231124
352 Ga0111539_10945120
353 Ga0114129_10000484
354 Ga0114129_10137549
355 Ga0114129_11180506
356 Ga0105243_10896160
357 Ga0105242_10312018
358 Ga0105238_10045910
359 Ga0105249_10110116
360 Ga0157374_10063166
361 Ga0157378_10002361
362 Ga0157372_10235336
363 Ga0157375_10191440
364 Ga0157380_10145326
365 Ga0157380_10260293
366 Ga0157380_10330902
367 Ga0157380_10554255
368 Ga0157379_10740535
369 Ga0213872_10000674
370 Ga0213872_10025480
371 Ga0207688_10145858
372 Ga0207699_10000518
373 Ga0207707_10418026
374 Ga0207649_10000667
375 Ga0207694_10024728
376 Ga0207650_10035363
377 Ga0207690_10011814
378 Ga0207686_10429060
379 Ga0207704_10157460
380 Ga0207689_10627705
381 Ga0207661_10027996
382 Ga0207661_10091746
383 Ga0207679_10274808
384 Ga0207667_10218705
385 Ga0207667_10419645
386 Ga0207712_10065085
387 Ga0207712_10325901
388 Ga0207640_10212215
389 Ga0207677_10494218
390 Ga0207639_10052601
391 Ga0207639_10571477
392 Ga0207702_10000153
393 Ga0207674_10021599
394 Ga0207675_100018372
395 Ga0209969_1005492
396 Ga0209981_1006160
397 Ga0209996_1020624
398 Ga0209984_1013432
399 Ga0210000_1009359
400 Ga0209995_1001023
401 Ga0209983_1009030
402 Ga0209971_1020760
403 Ga0209974_10027936
404 Ga0207428_10001286
405 Ga0207428_10142935
406 Ga0207428_10204114
407 Ga0268266_10000688
408 Ga0268266_10949928
409 Ga0268265_10053773
410 Ga0268264_10399139
411 Ga0265338_10261630
412 Ga0265760_10026539
413 Ga0265325_10244456
414 Ga0265327_10006266
415 Ga0307408_100233707
416 Ga0307408_100330866
417 Ga0307408_100690065
418 Ga0316575_10192855
419 Ga0316579_10179161
420 Ga0316578_10257935
421 Ga0307405_10210957
422 Ga0316577_10084892
423 Ga0307413_11301998
424 Ga0307406_10116491
425 Ga0307406_10393137
426 Ga0307412_10195554
427 Ga0307412_10237095
428 Ga0307409_100062347
429 Ga0307409_100322131
430 Ga0307416_100028626
431 Ga0307416_100111140
432 Ga0307416_100656501
433 Ga0307416_101825358
434 Ga0307411_10485554
435 Ga0307415_100088865
436 Ga0316580_10011089
437 Ga0316592_1055568
438 Ga0373952_0012013
439 Ga0373936_0087389
440 Ga0316574_0025967
441 Ga0316574_0036226
442 Ga0316574_0144938
443 Ga0316574_0484751
444 Ga0373947_0449888
445 Ga0316584_0263773
446 Ga0395899_0000045
447 Ga0395899_0642989
448 Ga0395900_0235531
449 Ga0395900_0293400
450 Ga0395898_0000057
451 Ga0395898_0406940
452 Ga0395901_0006873
453 Ga0395901_0105402
454 Ga0395901_0299000
455 Ga0436361_0648731
456 Ga0436361_0673583
457 Ga0436361_0906143
458 Ga0439448_0007458
459 Ga0451577_0042028
460 Ga0466957_0009951
461 Ga0495590_0101413
462 Ga0495584_0080493
463 Ga0495663_0108124
464 Ga0495668_0408058
465 Ga0495659_0220166
466 Ga0495588_0209876
467 Ga0495613_0302904
468 Ga0495624_0266468
469 Ga0496104_0913497
470 Ga0496110_0177505
471 Ga0496111_0190028
472 Ga0496112_0416441
473 Ga0496112_0828734
474 Ga0496113_0130613
475 Ga0496115_0687469
476 Ga0501031_0006464
477 Ga0501032_0000159
478 Ga0501033_0000007
479 Ga0501033_0017998
480 Ga0501034_0003832
481 Ga0501034_0221969
482 Ga0501034_0721475
483 Ga0501036_0085006
484 Ga0501037_0052213
485 Ga0501037_0699108
486 Ga0501038_0001059
487 Ga0501038_0009170
488 Ga0501039_0008993
489 Ga0501040_0001883
490 Ga0501041_0001122
491 Ga0501041_0073205
492 Ga0501042_0018224
493 Ga0501042_0084210
494 Ga0501043_0012975
495 Ga0501046_0002818
496 Ga0501047_0714661
497 Ga0501048_0007277
498 Ga0501067_0009393
499 Ga0501068_0226158
500 Ga0501069_0086093
501 Ga0501070_0068389
502 Ga0501070_0356932
503 Ga0501071_0000834
504 Ga0501072_0001786
505 Ga0501073_0067353
506 Ga0501074_0012435
507 Ga0501075_0012231
508 Ga0501075_0419114
509 Ga0501076_0001618
510 Ga0501076_0316426
511 Ga0501076_0686152
512 Ga0501077_0009525
513 Ga0501079_0023491
514 Ga0501080_0019467
515 Ga0501080_0146018
516 Ga0501081_0003415
517 Ga0501083_0010081
518 Ga0501035_0004791
519 Ga0501035_0226688
520 Ga0501044_0231751
521 Ga0501045_0000598
522 nmdc:mga03683_167490_c1
523 nmdc:mga05p37_31718_c1
524 nmdc:mga05p37_889_c1
525 nmdc:mga09592_14068_c1
526 nmdc:mga09592_360_c1
527 nmdc:mga0qj67_1326_c1
528 nmdc:mga0qj67_286382_c1
529 nmdc:mga0qj67_376405_c1
530 nmdc:mga0qj67_7453_c1
531 nmdc:mga06r32_1015_c1
532 nmdc:mga06r32_11588_c1
533 nmdc:mga06r32_155275_c1
534 nmdc:mga08y16_1236169_c1
535 nmdc:mga08y16_184508_c1
536 nmdc:mga08y16_3804_c1
537 nmdc:mga08y16_400493_c1
538 nmdc:mga08y16_47133_c1
539 nmdc:mga0n895_47699_c1
540 nmdc:mga0a205_160866_c1
541 nmdc:mga0a205_80895_c1
542 Ga0495655_0012441
543 Ga0500651_0186148
544 Ga0500617_025082
545 Ga0500588_0017950
546 Ga0500616_0008414
547 Ga0501084_0042112
548 Ga0501082_0002396
549 Ga0530510_0009260
550 Ga0530510_0520537
551 2526062255
552 2526212008
553 2688395327
554 2740063600

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF00677

Lum_binding

Lumazine binding domain

126

210

0.98

PF00677

Lum_binding

Lumazine binding domain

29

113

0.91

Structural Annotation

Top 5 Hits

ID Description Score Start End
4fxu-assembly1.cif.gz_A crystallographic structure of trimeric riboflavin synthase from brucella abortus 0.9557 1 192
4g6i-assembly1.cif.gz_B crystallographic structure of trimeric riboflavin synthase from brucella abortus in complex with roseoflavin 0.955 1 192
4gqn-assembly1.cif.gz_C crystallographic structure of trimeric riboflavin synthase from brucella abortus in complex with 5-nitro-6-(d-ribitylamino)-2,4(1h,3h) pyrimidinedione 0.9496 1 192
1kzl-assembly1.cif.gz_A riboflavin synthase from s.pombe bound to carboxyethyllumazine 0.9492 1 192
3a3g-assembly2.cif.gz_B crystal structure of lump complexed with 6,7-dimethyl-8-(1'-d-ribityl) lumazine 0.9429 1 182
ID Description Score Start End Superfamily
af_P9WK35_102_200_2.40.30.20 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9723 101 192 2.40.30.20
af_B7FAH8_195_301_2.40.30.20 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9712 101 193 2.40.30.20
4fxuC02 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9552 101 191 2.40.30.20
af_Q2FXG0_101_204_2.40.30.20 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.9552 101 199 2.40.30.20
af_A0A1D8PP67_110_218_2.40.30.20 Mainly Beta;Beta Barrel;Elongation Factor Tu (Ef-tu); domain 3; 0.953 101 192 2.40.30.20
ID Description Score Start End GO Terms
AF-A0A2V5YZK2-F1-model_v4 Riboflavin synthase (EC 2.5.1.9) 0.9851 27 195 GO:0004746
GO:0009231
AF-A0A7X3R7G4-F1-model_v4 Riboflavin synthase (EC 2.5.1.9) 0.9816 26 193 GO:0004746
GO:0009231
AF-A0A7C3MF41-F1-model_v4 Riboflavin synthase (EC 2.5.1.9) 0.9774 1 193 GO:0004746
GO:0009231
AF-A0A4V1SI75-F1-model_v4 deleted 0.977 1 179
AF-A0A2D5AK44-F1-model_v4 Riboflavin synthase (EC 2.5.1.9) 0.9768 1 192 GO:0004746
GO:0009231

Map