F381186

General Info

Members Datasets Scaffolds Average Seq Length
276 175 552 157

Family's Representative Sequence

Representative Sequence 3300027866|Ga0209813_10114598|Ga0209813_101145981
Length 184
Sequence MKAQIVKRFEDEIHLLDKELRTELPREIQRARELGDLRENAEYKAAKDRQDYLNARIAMLKRRVAEISLIDLDRIPVDKAAFGSVLELRESTGDTLTFQLVMPEDANADKGLISTASPIGRALLGKEEGDEVKVPTPTGVRQFEILKLTTIHQGANDGQNTFFIAMRPCTDCARLTLSAIGVIS

Samples

Sample ID Description Type Environment
1 3300027866 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 (SPAdes) (version 2) Metagenome Endosphere
2 3300003322 Sugarcane root Sample L2 Metagenome Unclassified
3 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
4 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
5 3300005329 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG Metagenome Rhizosphere
6 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
7 3300005333 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG Metagenome Rhizosphere
8 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
9 3300005335 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG Metagenome Rhizosphere
10 3300005336 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG Metagenome Rhizosphere
11 3300005344 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG Metagenome Rhizosphere
12 3300005347 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005354 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG Metagenome Rhizosphere
15 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
16 3300005356 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG Metagenome Rhizosphere
17 3300005364 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG Metagenome Rhizosphere
18 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
19 3300005455 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG Metagenome Rhizosphere
20 3300005456 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG Metagenome Rhizosphere
21 3300005458 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG Metagenome Rhizosphere
22 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
23 3300005466 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005535 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG Metagenome Rhizosphere
27 3300005539 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 Metagenome Rhizosphere
28 3300005543 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG Metagenome Rhizosphere
29 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
30 3300005548 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG Metagenome Rhizosphere
31 3300005563 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 Metagenome Rhizosphere
32 3300005564 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG Metagenome Rhizosphere
33 3300005577 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 Metagenome Rhizosphere
34 3300005578 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 Metagenome Rhizosphere
35 3300005615 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG Metagenome Rhizosphere
36 3300005616 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 Metagenome Rhizosphere
37 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
38 3300005618 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 Metagenome Rhizosphere
39 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
40 3300005840 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 Metagenome Rhizosphere
41 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
42 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
43 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
44 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
45 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
46 3300005983 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S2T1R1 Metagenome Rhizosphere
47 3300006042 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 Metagenome Endosphere
48 3300006048 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 Metagenome Endosphere
49 3300006051 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 Metagenome Endosphere
50 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
51 3300006178 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 Metagenome Endosphere
52 3300006195 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 Metagenome Endosphere
53 3300006353 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 Metagenome Endosphere
54 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
55 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
56 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
57 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
58 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
59 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
60 3300009093 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG Metagenome Rhizosphere
61 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
62 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
63 3300009101 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG Metagenome Rhizosphere
64 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
65 3300009174 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG Metagenome Rhizosphere
66 3300009176 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG Metagenome Rhizosphere
67 3300009545 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG Metagenome Rhizosphere
68 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
69 3300010375 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG Metagenome Rhizosphere
70 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
71 3300013104 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaG Metagenome Rhizosphere
72 3300013307 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG Metagenome Rhizosphere
73 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
74 3300014325 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG Metagenome Rhizosphere
75 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
76 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
77 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
78 3300017792 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG Metagenome Rhizosphere
79 3300025302 Arabidopsis root microbial communities from the University of North Carolina, USA - plate scrape MF_Cvi_mMS (SPAdes) (version 2) Metagenome Endosphere
80 3300025893 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
81 3300025900 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300025903 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
83 3300025908 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300025911 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
85 3300025912 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
86 3300025914 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
87 3300025917 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
88 3300025920 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
89 3300025921 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes) (version 2) Metagenome Rhizosphere
90 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
91 3300025925 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
92 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
93 3300025927 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
94 3300025931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
95 3300025934 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
96 3300025940 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
97 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
98 3300025944 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes) (version 2) Metagenome Rhizosphere
99 3300025945 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
100 3300025949 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2 (SPAdes) (version 2) Metagenome Rhizosphere
101 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
102 3300025961 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
103 3300025972 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
104 3300025981 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes) (version 2) Metagenome Rhizosphere
105 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
106 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
107 3300026041 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes) (version 2) Metagenome Rhizosphere
108 3300026067 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
109 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
110 3300026088 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) (version 2) Metagenome Rhizosphere
111 3300026095 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes) (version 2) Metagenome Rhizosphere
112 3300026116 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2 (SPAdes) (version 2) Metagenome Rhizosphere
113 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
114 3300026121 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
115 3300026142 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes) (version 2) Metagenome Rhizosphere
116 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
117 3300028379 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
118 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
119 3300031456 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 15_EM Metagenome Unclassified
120 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
121 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
122 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
123 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
124 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
125 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
126 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
127 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
128 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
129 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
130 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
131 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
132 3300038443 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Nitrogen_D SG_4 Metagenome Rhizosphere
133 3300041410 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116DE14Z082817_5596 Metagenome Rhizosphere
134 3300041443 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR17_2 MetaG Metagenome Rhizoplane
135 3300041459 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_11 MetaG Metagenome Rhizoplane
136 3300041460 Perennial ryegrass root microbial community from Lincoln, Canterbury, New Zealand - RGR18_12 MetaG Metagenome Rhizoplane
137 3300041494 White clover root microbial community from Lincoln, Canterbury, New Zealand - WCR17_3 MetaG Metagenome Unclassified
138 3300041999 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0821WE14Z070717_5297 Metagenome Rhizosphere
139 3300042013 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z071817_5339 Metagenome Rhizosphere
140 3300042015 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z070717_5287 Metagenome Rhizosphere
141 3300042122 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0926D_E14_082716_2496 Metagenome Rhizosphere
142 3300042133 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB1023D_E14_070716_134 Metagenome Rhizosphere
143 3300042134 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627W_E14_070716_126 Metagenome Rhizosphere
144 3300042146 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0714D_E14_080116_2979 Metagenome Rhizosphere
145 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
146 3300042184 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0627D_E14_080116_2630 Metagenome Rhizosphere
147 3300042436 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0113LE14Z081617_5520 Metagenome Rhizosphere
148 3300044658 Rhizosphere microbial communities from millet plant in semiarid region near Thies, Senegal - COC1R Metagenome Rhizosphere
149 3300045051 Rhizosphere soil microbial communities from rice plant in Newark, Delaware, United States - Rhiz_9BH_GED Metagenome Rhizosphere
150 3300046460 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 rhizosphere Metagenome Rhizosphere
151 3300046616 Rhizosphere soil microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 rhizosphere Metagenome Rhizosphere
152 3300048911 Rhizoplane soil microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - KLW rhizoplane_8v unlabeled Metagenome Rhizoplane
153 3300048924 Root microbial communities from switchgrass plant in W.K. Kellogg Biological Station, Michigan, USA - CIR root_3e N15 Metagenome Unclassified
154 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
155 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
156 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
157 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
158 3300049686 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I11_B_3_control Metagenome Rhizosphere
159 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
160 3300050490 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-3 re-annotation Metagenome Endosphere
161 3300050491 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4 re-annotation Metagenome Endosphere
162 3300050493 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-1 re-annotation Metagenome Endosphere
163 3300050494 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-2 re-annotation Metagenome Endosphere
164 3300050495 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-3 re-annotation Metagenome Endosphere
165 3300050496 Populus endosphere microbial communities from Tennessee, USA - Endosphere MetaG P. TD hybrid TD303-5 re-annotation Metagenome Endosphere
166 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
167 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
168 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
169 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
170 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
171 3300053096 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - GW-4579-Co1_14_4 endosphere Metagenome Endosphere
172 3300053116 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-360-Co1_23_6 endosphere Metagenome Endosphere
173 3300053727 Root microbial communities from poplar common garden site in Corvallis, Oregon, USA - BESC-833-Co3_31_37 endosphere Metagenome Endosphere
174 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
175 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 100
Metatranscriptomes 0
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 12.32
Nodule 0
Rhizoplane 1.45
Rhizosphere 84.78
Stem 0
Stem Tuber 0
Unclassified 17.39

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0209813_10114598 3300027866 Bacteria 932
2 rootL2_10243389 3300003322 Unclassified 3094
3 Ga0065704_10082109 3300005289 Bacteria 3652
4 Ga0065707_10098597 3300005295 Bacteria 3062
5 Ga0070683_100486731 3300005329 Bacteria 1178
6 Ga0070670_100046015 3300005331 Bacteria 3751
7 Ga0070670_100490418 3300005331 Bacteria 1092
8 Ga0070677_10184639 3300005333 Bacteria 996
9 Ga0068869_100013584 3300005334 Bacteria 5419
10 Ga0070666_10540743 3300005335 Bacteria 847
11 Ga0070680_100746623 3300005336 Bacteria 842
12 Ga0070661_100326851 3300005344 Bacteria 1199
13 Ga0070661_100370523 3300005344 Bacteria 1127
14 Ga0070668_100025116 3300005347 Bacteria 4517
15 Ga0070669_100203150 3300005353 Bacteria 1560
16 Ga0070669_100667028 3300005353 Bacteria 876
17 Ga0070675_100029637 3300005354 Bacteria 4415
18 Ga0070675_100074698 3300005354 Bacteria 2817
19 Ga0070671_100009396 3300005355 Bacteria 7851
20 Ga0070671_100558297 3300005355 Unclassified 988
21 Ga0070674_100448206 3300005356 Bacteria 1065
22 Ga0070673_100198523 3300005364 Bacteria 1727
23 Ga0070667_100016932 3300005367 Bacteria 6032
24 Ga0070667_100208599 3300005367 Bacteria 1736
25 Ga0070667_100210123 3300005367 Bacteria 1729
26 Ga0070667_100470235 3300005367 Unclassified 1150
27 Ga0070667_100570400 3300005367 Bacteria 1041
28 Ga0070667_101370523 3300005367 Bacteria 663
29 Ga0070663_100039088 3300005455 Bacteria 3314
30 Ga0070663_100061708 3300005455 Bacteria 2700
31 Ga0070663_100774289 3300005455 Unclassified 821
32 Ga0070678_100091689 3300005456 Bacteria 2332
33 Ga0070678_100095418 3300005456 Unclassified 2292
34 Ga0070681_10007586 3300005458 Bacteria 10607
35 Ga0068867_100265022 3300005459 Unclassified 1402
36 Ga0070685_11023163 3300005466 Bacteria 621
37 Ga0070698_100185492 3300005471 Bacteria 2018
38 Ga0070699_101303509 3300005518 Unclassified 666
39 Ga0070684_100704448 3300005535 Bacteria 941
40 Ga0068853_100145836 3300005539 Bacteria 2127
41 Ga0070672_100040591 3300005543 Bacteria 3571
42 Ga0070686_101150502 3300005544 Bacteria 643
43 Ga0070665_100006031 3300005548 Bacteria 12382
44 Ga0070665_100075191 3300005548 Bacteria 3385
45 Ga0068855_101589742 3300005563 Unclassified 669
46 Ga0070664_100009064 3300005564 Bacteria 8073
47 Ga0068857_100170578 3300005577 Bacteria 1978
48 Ga0068857_100771722 3300005577 Unclassified 917
49 Ga0068854_100212016 3300005578 Bacteria 1528
50 Ga0070702_100040901 3300005615 Bacteria 2596
51 Ga0068852_100163811 3300005616 Bacteria 2079
52 Ga0068859_100010862 3300005617 Bacteria 9163
53 Ga0068859_100045184 3300005617 Bacteria 4426
54 Ga0068864_100051974 3300005618 Unclassified 3531
55 Ga0068864_100239801 3300005618 Unclassified 1680
56 Ga0068864_100699818 3300005618 Bacteria 990
57 Ga0068861_100032014 3300005719 Bacteria 3869
58 Ga0068861_100235522 3300005719 Unclassified 1555
59 Ga0068870_10412470 3300005840 Bacteria 882
60 Ga0068870_10816428 3300005840 Unclassified 653
61 Ga0068863_100191657 3300005841 Unclassified 1964
62 Ga0068858_101053000 3300005842 Unclassified 798
63 Ga0068860_100017697 3300005843 Bacteria 6942
64 Ga0068860_100147307 3300005843 Bacteria 2266
65 Ga0068862_101103721 3300005844 Bacteria 788
66 Ga0068862_101108648 3300005844 Bacteria 787
67 Ga0081455_10545746 3300005937 Bacteria 768
68 Ga0081540_1016205 3300005983 Bacteria 4677
69 Ga0075368_10042227 3300006042 Bacteria 1794
70 Ga0075368_10110598 3300006042 Bacteria 1133
71 Ga0075363_100049332 3300006048 Bacteria 2241
72 Ga0075364_10229591 3300006051 Unclassified 1260
73 Ga0075364_10293375 3300006051 Bacteria 1107
74 Ga0075364_10364173 3300006051 Bacteria 986
75 Ga0070716_100763654 3300006173 Bacteria 745
76 Ga0075367_10040376 3300006178 Bacteria 2724
77 Ga0075367_10136724 3300006178 Bacteria 1516
78 Ga0075367_10238288 3300006178 Bacteria 1140
79 Ga0075366_10001827 3300006195 Bacteria 10731
80 Ga0075366_10033641 3300006195 Bacteria 3020
81 Ga0075366_10220115 3300006195 Bacteria 1156
82 Ga0075370_10016576 3300006353 Bacteria 3966
83 Ga0075370_10201704 3300006353 Bacteria 1173
84 Ga0068871_100033633 3300006358 Unclassified 4062
85 Ga0068871_101273854 3300006358 Unclassified 691
86 Ga0075428_100711277 3300006844 Bacteria 1070
87 Ga0075430_100025765 3300006846 Bacteria 5004
88 Ga0075430_100482985 3300006846 Unclassified 1022
89 Ga0075431_100202931 3300006847 Bacteria 2028
90 Ga0075433_10346147 3300006852 Bacteria 1314
91 Ga0097620_100010862 3300006931 Bacteria 9163
92 Ga0097620_100045185 3300006931 Bacteria 4426
93 Ga0105240_10286998 3300009093 Bacteria 1888
94 Ga0111539_10091951 3300009094 Bacteria 3565
95 Ga0111539_10265010 3300009094 Bacteria 2000
96 Ga0105245_10344103 3300009098 Bacteria 1475
97 Ga0105247_10034776 3300009101 Bacteria 3069
98 Ga0105247_10288060 3300009101 Bacteria 1135
99 Ga0105247_11588836 3300009101 Unclassified 537
100 Ga0114129_10179729 3300009147 Bacteria 2880
101 Ga0105241_10051474 3300009174 Bacteria 3141
102 Ga0105241_10236155 3300009174 Unclassified 1543
103 Ga0105242_10805862 3300009176 Unclassified 930
104 Ga0105237_10063086 3300009545 Bacteria 3703
105 Ga0105249_10039737 3300009553 Bacteria 4272
106 Ga0105249_11057630 3300009553 Bacteria 881
107 Ga0105239_10086594 3300010375 Bacteria 3453
108 Ga0157373_10121859 3300013100 Bacteria 1833
109 Ga0157370_10042506 3300013104 Bacteria 4379
110 Ga0157372_10123464 3300013307 Unclassified 2977
111 Ga0157372_10160260 3300013307 Bacteria 2600
112 Ga0157375_10039582 3300013308 Bacteria 4538
113 Ga0157375_10078370 3300013308 Bacteria 3337
114 Ga0157375_10565267 3300013308 Bacteria 1298
115 Ga0163163_10351921 3300014325 Bacteria 1529
116 Ga0163163_10357566 3300014325 Bacteria 1517
117 Ga0163163_10395265 3300014325 Bacteria 1440
118 Ga0157380_10005659 3300014326 Bacteria 8739
119 Ga0157380_11056772 3300014326 Bacteria 849
120 Ga0157379_10510760 3300014968 Unclassified 1115
121 Ga0157376_10187701 3300014969 Bacteria 1893
122 Ga0163161_10425390 3300017792 Bacteria 1069
123 Ga0207426_1047780 3300025302 Bacteria 1289
124 Ga0207682_10030878 3300025893 Bacteria 2148
125 Ga0207682_10070508 3300025893 Bacteria 1480
126 Ga0207710_10034663 3300025900 Bacteria 2219
127 Ga0207680_10210671 3300025903 Bacteria 1328
128 Ga0207643_10016358 3300025908 Bacteria 4046
129 Ga0207643_10280131 3300025908 Bacteria 1034
130 Ga0207654_10337454 3300025911 Bacteria 1034
131 Ga0207707_10003636 3300025912 Bacteria 13672
132 Ga0207671_10173365 3300025914 Bacteria 1676
133 Ga0207660_10599513 3300025917 Unclassified 897
134 Ga0207649_10169703 3300025920 Bacteria 1519
135 Ga0207652_10618622 3300025921 Bacteria 970
136 Ga0207681_10324193 3300025923 Bacteria 1226
137 Ga0207650_10561061 3300025925 Bacteria 958
138 Ga0207650_10562863 3300025925 Bacteria 956
139 Ga0207659_10034349 3300025926 Bacteria 3496
140 Ga0207659_10035115 3300025926 Bacteria 3463
141 Ga0207687_10530828 3300025927 Bacteria 985
142 Ga0207644_10048017 3300025931 Bacteria 3049
143 Ga0207644_10473800 3300025931 Unclassified 1030
144 Ga0207686_10574690 3300025934 Unclassified 884
145 Ga0207691_10054690 3300025940 Bacteria 3640
146 Ga0207691_10062669 3300025940 Bacteria 3373
147 Ga0207689_10086212 3300025942 Unclassified 2581
148 Ga0207661_11331202 3300025944 Unclassified 660
149 Ga0207679_10244288 3300025945 Unclassified 1523
150 Ga0207679_10490253 3300025945 Unclassified 1095
151 Ga0207667_11291956 3300025949 Unclassified 706
152 Ga0207651_10429637 3300025960 Bacteria 1129
153 Ga0207712_10062682 3300025961 Bacteria 2644
154 Ga0207668_10029626 3300025972 Bacteria 3589
155 Ga0207668_10069751 3300025972 Bacteria 2504
156 Ga0207640_10249752 3300025981 Bacteria 1376
157 Ga0207658_10522580 3300025986 Unclassified 1059
158 Ga0207658_10610291 3300025986 Unclassified 981
159 Ga0207658_10720266 3300025986 Bacteria 902
160 Ga0207677_10200237 3300026023 Bacteria 1587
161 Ga0207677_10943778 3300026023 Bacteria 780
162 Ga0207639_10453714 3300026041 Bacteria 1164
163 Ga0207678_10025846 3300026067 Bacteria 5124
164 Ga0207678_10135607 3300026067 Bacteria 2100
165 Ga0207678_10740489 3300026067 Bacteria 866
166 Ga0207708_10167273 3300026075 Bacteria 1739
167 Ga0207708_11377251 3300026075 Bacteria 619
168 Ga0207641_10220765 3300026088 Unclassified 1757
169 Ga0207676_10112727 3300026095 Bacteria 2279
170 Ga0207676_10186738 3300026095 Unclassified 1820
171 Ga0207674_10069309 3300026116 Bacteria 3547
172 Ga0207675_100379794 3300026118 Bacteria 1389
173 Ga0207675_100416883 3300026118 Bacteria 1325
174 Ga0207683_10035516 3300026121 Bacteria 4335
175 Ga0207683_10054204 3300026121 Bacteria 3516
176 Ga0207683_10118586 3300026121 Bacteria 2374
177 Ga0207698_10122246 3300026142 Bacteria 2206
178 Ga0207428_10345524 3300027907 Bacteria 1095
179 Ga0268266_10325107 3300028379 Unclassified 1440
180 Ga0265338_10716453 3300028800 Bacteria 690
181 Ga0307513_10729934 3300031456 Bacteria 696
182 Ga0307408_100077936 3300031548 Bacteria 2469
183 Ga0307408_100165209 3300031548 Bacteria 1762
184 Ga0307408_100803597 3300031548 Bacteria 854
185 Ga0307408_100843677 3300031548 Bacteria 835
186 Ga0307413_10140370 3300031824 Bacteria 1669
187 Ga0307413_10586028 3300031824 Bacteria 910
188 Ga0307413_10912424 3300031824 Bacteria 747
189 Ga0307410_10100827 3300031852 Unclassified 2069
190 Ga0307410_10984876 3300031852 Bacteria 726
191 Ga0307410_11475499 3300031852 Unclassified 598
192 Ga0307406_10103326 3300031901 Bacteria 1946
193 Ga0307406_10329946 3300031901 Bacteria 1184
194 Ga0307407_10439981 3300031903 Bacteria 944
195 Ga0307412_11498154 3300031911 Bacteria 613
196 Ga0307409_100283380 3300031995 Bacteria 1533
197 Ga0307409_101165166 3300031995 Bacteria 793
198 Ga0307409_101213941 3300031995 Bacteria 778
199 Ga0307416_100062201 3300032002 Bacteria 3051
200 Ga0307416_100301448 3300032002 Bacteria 1593
201 Ga0307416_100382463 3300032002 Bacteria 1438
202 Ga0307416_102562508 3300032002 Unclassified 608
203 Ga0307414_11079602 3300032004 Bacteria 741
204 Ga0307411_10216130 3300032005 Bacteria 1484
205 Ga0307411_10838877 3300032005 Bacteria 812
206 Ga0307411_11086593 3300032005 Unclassified 720
207 Ga0307411_11174453 3300032005 Bacteria 695
208 Ga0307411_11699882 3300032005 Bacteria 584
209 Ga0307415_100170886 3300032126 Bacteria 1695
210 Ga0307415_100263068 3300032126 Bacteria 1409
211 Ga0307415_100313374 3300032126 Bacteria 1305
212 Ga0307415_100402637 3300032126 Bacteria 1169
213 Ga0307415_100429639 3300032126 Bacteria 1136
214 Ga0307415_100543334 3300032126 Bacteria 1024
215 Ga0307415_101184097 3300032126 Bacteria 719
216 Ga0395905_0122454 3300037471 Bacteria 2445
217 Ga0395905_0684849 3300037471 Bacteria 927
218 Ga0395905_1332373 3300037471 Bacteria 622
219 Ga0395901_2160581 3300038443 Unclassified 501
220 Ga0439461_0040505 3300041410 Bacteria 1005
221 Ga0439461_0092454 3300041410 Bacteria 727
222 Ga0451789_0295247 3300041443 Bacteria 841
223 Ga0451800_1363754 3300041459 Bacteria 659
224 Ga0451802_0451023 3300041460 Bacteria 766
225 Ga0451837_1805354 3300041494 Bacteria 741
226 Ga0439433_0008845 3300041999 Bacteria 2190
227 Ga0439456_054641 3300042013 Unclassified 874
228 Ga0439462_0043668 3300042015 Bacteria 1198
229 Ga0450920_007059 3300042122 Bacteria 2030
230 Ga0450896_066756 3300042133 Bacteria 592
231 Ga0450898_050481 3300042134 Bacteria 803
232 Ga0450907_036902 3300042146 Bacteria 835
233 Ga0439446_0027071 3300042156 Bacteria 1645
234 Ga0450908_001077 3300042184 Bacteria 5285
235 Ga0439435_0158622 3300042436 Bacteria 729
236 Ga0466972_0215745 3300044658 Bacteria 898
237 Ga0451576_0100141 3300045051 Bacteria 3014
238 Ga0495638_0009994 3300046460 Bacteria 6618
239 Ga0495668_0316012 3300046616 Bacteria 856
240 Ga0496108_0179185 3300048911 Bacteria 1835
241 Ga0496121_0766273 3300048924 Unclassified 572
242 Ga0501034_0757710 3300049571 Unclassified 866
243 Ga0501042_0617518 3300049578 Bacteria 788
244 Ga0501072_0248857 3300049588 Bacteria 1415
245 Ga0501076_0298245 3300049592 Bacteria 1321
246 Ga0501257_064848 3300049686 Bacteria 927
247 Ga0501079_0332103 3300049741 Bacteria 1191
248 nmdc:mga03n38_106434_c1 3300050490 Bacteria 1360
249 nmdc:mga00v17_130605_c1 3300050491 Bacteria 1605
250 nmdc:mga00v17_592116_c1 3300050491 Bacteria 715
251 nmdc:mga00v17_913059_c1 3300050491 Bacteria 556
252 nmdc:mga0k408_59568_c1 3300050493 Unclassified 2218
253 nmdc:mga0k408_686148_c1 3300050493 Bacteria 601
254 nmdc:mga0k408_85378_c1 3300050493 Bacteria 1853
255 nmdc:mga0k408_90512_c1 3300050493 Bacteria 1797
256 nmdc:mga06z11_111501_c1 3300050494 Bacteria 1114
257 nmdc:mga06z11_132972_c1 3300050494 Bacteria 1399
258 nmdc:mga06z11_151323_c1 3300050494 Bacteria 1319
259 nmdc:mga04h51_278469_c1 3300050495 Bacteria 677
260 nmdc:mga04h51_367408_c1 3300050495 Bacteria 597
261 nmdc:mga07m45_161730_c1 3300050496 Bacteria 1300
262 nmdc:mga07m45_41132_c1 3300050496 Bacteria 2588
263 nmdc:mga05p37_1110896_c1 3300050507 Bacteria 827
264 nmdc:mga05p37_436857_c1 3300050507 Bacteria 1519
265 nmdc:mga09592_461523_c1 3300050508 Bacteria 1095
266 nmdc:mga0qj67_21441_c1 3300050509 Bacteria 4956
267 nmdc:mga06r32_1777821_c1 3300050510 Bacteria 552
268 nmdc:mga06r32_253270_c1 3300050510 Bacteria 1748
269 nmdc:mga08y16_1299477_c1 3300050511 Bacteria 694
270 nmdc:mga08y16_195652_c1 3300050511 Unclassified 2096
271 Ga0500641_0058364 3300053096 Bacteria 1602
272 Ga0500592_016937 3300053116 Bacteria 1170
273 Ga0500611_096927 3300053727 Bacteria 758
274 Ga0501084_0595577 3300054114 Bacteria 934
275 Ga0530510_0107466 3300061734 Bacteria 2042
276 Ga0530510_1028051 3300061734 Unclassified 631
277 Ga0209813_10114598
278 rootL2_10243389
279 Ga0065704_10082109
280 Ga0065707_10098597
281 Ga0070683_100486731
282 Ga0070670_100046015
283 Ga0070670_100490418
284 Ga0070677_10184639
285 Ga0068869_100013584
286 Ga0070666_10540743
287 Ga0070680_100746623
288 Ga0070661_100326851
289 Ga0070661_100370523
290 Ga0070668_100025116
291 Ga0070669_100203150
292 Ga0070669_100667028
293 Ga0070675_100029637
294 Ga0070675_100074698
295 Ga0070671_100009396
296 Ga0070671_100558297
297 Ga0070674_100448206
298 Ga0070673_100198523
299 Ga0070667_100016932
300 Ga0070667_100208599
301 Ga0070667_100210123
302 Ga0070667_100470235
303 Ga0070667_100570400
304 Ga0070667_101370523
305 Ga0070663_100039088
306 Ga0070663_100061708
307 Ga0070663_100774289
308 Ga0070678_100091689
309 Ga0070678_100095418
310 Ga0070681_10007586
311 Ga0068867_100265022
312 Ga0070685_11023163
313 Ga0070698_100185492
314 Ga0070699_101303509
315 Ga0070684_100704448
316 Ga0068853_100145836
317 Ga0070672_100040591
318 Ga0070686_101150502
319 Ga0070665_100006031
320 Ga0070665_100075191
321 Ga0068855_101589742
322 Ga0070664_100009064
323 Ga0068857_100170578
324 Ga0068857_100771722
325 Ga0068854_100212016
326 Ga0070702_100040901
327 Ga0068852_100163811
328 Ga0068859_100010862
329 Ga0068859_100045184
330 Ga0068864_100051974
331 Ga0068864_100239801
332 Ga0068864_100699818
333 Ga0068861_100032014
334 Ga0068861_100235522
335 Ga0068870_10412470
336 Ga0068870_10816428
337 Ga0068863_100191657
338 Ga0068858_101053000
339 Ga0068860_100017697
340 Ga0068860_100147307
341 Ga0068862_101103721
342 Ga0068862_101108648
343 Ga0081455_10545746
344 Ga0081540_1016205
345 Ga0075368_10042227
346 Ga0075368_10110598
347 Ga0075363_100049332
348 Ga0075364_10229591
349 Ga0075364_10293375
350 Ga0075364_10364173
351 Ga0070716_100763654
352 Ga0075367_10040376
353 Ga0075367_10136724
354 Ga0075367_10238288
355 Ga0075366_10001827
356 Ga0075366_10033641
357 Ga0075366_10220115
358 Ga0075370_10016576
359 Ga0075370_10201704
360 Ga0068871_100033633
361 Ga0068871_101273854
362 Ga0075428_100711277
363 Ga0075430_100025765
364 Ga0075430_100482985
365 Ga0075431_100202931
366 Ga0075433_10346147
367 Ga0097620_100010862
368 Ga0097620_100045185
369 Ga0105240_10286998
370 Ga0111539_10091951
371 Ga0111539_10265010
372 Ga0105245_10344103
373 Ga0105247_10034776
374 Ga0105247_10288060
375 Ga0105247_11588836
376 Ga0114129_10179729
377 Ga0105241_10051474
378 Ga0105241_10236155
379 Ga0105242_10805862
380 Ga0105237_10063086
381 Ga0105249_10039737
382 Ga0105249_11057630
383 Ga0105239_10086594
384 Ga0157373_10121859
385 Ga0157370_10042506
386 Ga0157372_10123464
387 Ga0157372_10160260
388 Ga0157375_10039582
389 Ga0157375_10078370
390 Ga0157375_10565267
391 Ga0163163_10351921
392 Ga0163163_10357566
393 Ga0163163_10395265
394 Ga0157380_10005659
395 Ga0157380_11056772
396 Ga0157379_10510760
397 Ga0157376_10187701
398 Ga0163161_10425390
399 Ga0207426_1047780
400 Ga0207682_10030878
401 Ga0207682_10070508
402 Ga0207710_10034663
403 Ga0207680_10210671
404 Ga0207643_10016358
405 Ga0207643_10280131
406 Ga0207654_10337454
407 Ga0207707_10003636
408 Ga0207671_10173365
409 Ga0207660_10599513
410 Ga0207649_10169703
411 Ga0207652_10618622
412 Ga0207681_10324193
413 Ga0207650_10561061
414 Ga0207650_10562863
415 Ga0207659_10034349
416 Ga0207659_10035115
417 Ga0207687_10530828
418 Ga0207644_10048017
419 Ga0207644_10473800
420 Ga0207686_10574690
421 Ga0207691_10054690
422 Ga0207691_10062669
423 Ga0207689_10086212
424 Ga0207661_11331202
425 Ga0207679_10244288
426 Ga0207679_10490253
427 Ga0207667_11291956
428 Ga0207651_10429637
429 Ga0207712_10062682
430 Ga0207668_10029626
431 Ga0207668_10069751
432 Ga0207640_10249752
433 Ga0207658_10522580
434 Ga0207658_10610291
435 Ga0207658_10720266
436 Ga0207677_10200237
437 Ga0207677_10943778
438 Ga0207639_10453714
439 Ga0207678_10025846
440 Ga0207678_10135607
441 Ga0207678_10740489
442 Ga0207708_10167273
443 Ga0207708_11377251
444 Ga0207641_10220765
445 Ga0207676_10112727
446 Ga0207676_10186738
447 Ga0207674_10069309
448 Ga0207675_100379794
449 Ga0207675_100416883
450 Ga0207683_10035516
451 Ga0207683_10054204
452 Ga0207683_10118586
453 Ga0207698_10122246
454 Ga0207428_10345524
455 Ga0268266_10325107
456 Ga0265338_10716453
457 Ga0307513_10729934
458 Ga0307408_100077936
459 Ga0307408_100165209
460 Ga0307408_100803597
461 Ga0307408_100843677
462 Ga0307413_10140370
463 Ga0307413_10586028
464 Ga0307413_10912424
465 Ga0307410_10100827
466 Ga0307410_10984876
467 Ga0307410_11475499
468 Ga0307406_10103326
469 Ga0307406_10329946
470 Ga0307407_10439981
471 Ga0307412_11498154
472 Ga0307409_100283380
473 Ga0307409_101165166
474 Ga0307409_101213941
475 Ga0307416_100062201
476 Ga0307416_100301448
477 Ga0307416_100382463
478 Ga0307416_102562508
479 Ga0307414_11079602
480 Ga0307411_10216130
481 Ga0307411_10838877
482 Ga0307411_11086593
483 Ga0307411_11174453
484 Ga0307411_11699882
485 Ga0307415_100170886
486 Ga0307415_100263068
487 Ga0307415_100313374
488 Ga0307415_100402637
489 Ga0307415_100429639
490 Ga0307415_100543334
491 Ga0307415_101184097
492 Ga0395905_0122454
493 Ga0395905_0684849
494 Ga0395905_1332373
495 Ga0395901_2160581
496 Ga0439461_0040505
497 Ga0439461_0092454
498 Ga0451789_0295247
499 Ga0451800_1363754
500 Ga0451802_0451023
501 Ga0451837_1805354
502 Ga0439433_0008845
503 Ga0439456_054641
504 Ga0439462_0043668
505 Ga0450920_007059
506 Ga0450896_066756
507 Ga0450898_050481
508 Ga0450907_036902
509 Ga0439446_0027071
510 Ga0450908_001077
511 Ga0439435_0158622
512 Ga0466972_0215745
513 Ga0451576_0100141
514 Ga0495638_0009994
515 Ga0495668_0316012
516 Ga0496108_0179185
517 Ga0496121_0766273
518 Ga0501034_0757710
519 Ga0501042_0617518
520 Ga0501072_0248857
521 Ga0501076_0298245
522 Ga0501257_064848
523 Ga0501079_0332103
524 nmdc:mga03n38_106434_c1
525 nmdc:mga00v17_130605_c1
526 nmdc:mga00v17_592116_c1
527 nmdc:mga00v17_913059_c1
528 nmdc:mga0k408_59568_c1
529 nmdc:mga0k408_686148_c1
530 nmdc:mga0k408_85378_c1
531 nmdc:mga0k408_90512_c1
532 nmdc:mga06z11_111501_c1
533 nmdc:mga06z11_132972_c1
534 nmdc:mga06z11_151323_c1
535 nmdc:mga04h51_278469_c1
536 nmdc:mga04h51_367408_c1
537 nmdc:mga07m45_161730_c1
538 nmdc:mga07m45_41132_c1
539 nmdc:mga05p37_1110896_c1
540 nmdc:mga05p37_436857_c1
541 nmdc:mga09592_461523_c1
542 nmdc:mga0qj67_21441_c1
543 nmdc:mga06r32_1777821_c1
544 nmdc:mga06r32_253270_c1
545 nmdc:mga08y16_1299477_c1
546 nmdc:mga08y16_195652_c1
547 Ga0500641_0058364
548 Ga0500592_016937
549 Ga0500611_096927
550 Ga0501084_0595577
551 Ga0530510_0107466
552 Ga0530510_1028051

MSA Aligner

Download Fasta Download Aligned Fasta

Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF01272

GreA_GreB

Transcription elongation factor, GreA/GreB, C-term

75

150

0.96

PF03449

GreA_GreB_N

Transcription elongation factor, N-terminal

1

68

0.94

Structural Annotation

Top 5 Hits

ID Description Score Start End
6zw4-assembly1.cif.gz_A c14 symmetry: bacterial vipp1 and pspa are members of the ancient escrt-iii membrane-remodeling superfamily. 0.925 3 68
6zw5-assembly1.cif.gz_A c15 symmetry: bacterial vipp1 and pspa are members of the ancient escrt-iii membrane-remodeling superfamily. 0.9223 3 68
6zw4-assembly1.cif.gz_C c14 symmetry: bacterial vipp1 and pspa are members of the ancient escrt-iii membrane-remodeling superfamily. 0.9201 3 68
6zw5-assembly1.cif.gz_B c15 symmetry: bacterial vipp1 and pspa are members of the ancient escrt-iii membrane-remodeling superfamily. 0.9192 3 68
6zw5-assembly1.cif.gz_F c15 symmetry: bacterial vipp1 and pspa are members of the ancient escrt-iii membrane-remodeling superfamily. 0.9175 3 68
ID Description Score Start End Superfamily
af_P9WMT9_4_78_1.10.287.180 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Transcription elongation factor, GreA/GreB, N-terminal domain 0.9643 5 64 1.10.287.180
af_P0A6W5_1_75_1.10.287.180 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Transcription elongation factor, GreA/GreB, N-terminal domain 0.9287 5 64 1.10.287.180
1grjA01 Mainly Alpha;Orthogonal Bundle;Helix Hairpins;Transcription elongation factor, GreA/GreB, N-terminal domain 0.9068 5 64 1.10.287.180
3pwfB01 Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle 0.893 5 70 1.20.1260.10
1nnqB01 Mainly Alpha;Up-down Bundle;Ferritin;Ferritin, core subunit, four-helix bundle 0.8868 5 70 1.20.1260.10
ID Description Score Start End GO Terms
AF-A0A1F9CBY2-F1-model_v4 Transcription elongation factor GreA 0.9699 2 152 GO:0003677
GO:0006354
GO:0032784
GO:0070063
AF-A0A7W0V2Q5-F1-model_v4 Transcription elongation factor GreA 0.9579 2 139 GO:0003677
GO:0003746
GO:0006354
GO:0032784
GO:0070063
AF-A0A2T4U0I0-F1-model_v4 Transcription elongation factor GreA 0.9515 2 153 GO:0003677
GO:0003746
GO:0006354
GO:0032784
GO:0070063
AF-D5MFS8-F1-model_v4 Transcription elongation factor greA (Transcript cleavage factor greA) 0.9447 2 153 GO:0003677
GO:0003746
GO:0006354
GO:0032784
GO:0070063
AF-A0A7Y2D4Y5-F1-model_v4 Transcription elongation factor GreA (Transcript cleavage factor GreA) 0.9416 1 155 GO:0003677
GO:0003746
GO:0006354
GO:0032784
GO:0070063

Map