F381131

General Info

Members Datasets Scaffolds Average Seq Length
276 178 552 148

Family's Representative Sequence

Representative Sequence 3300014968|Ga0157379_10000090|Ga0157379_100000904
Length 164
Sequence MAVMQISRKIDYALRAAIHLAMRSDDGRPSSVAEIAVREGVPKKFLEKIIQDLIHHGIVRSTRGAQGGYTLARAPEMVTFKDVIEAIEGPVSLNVCVGASGDTHECTMLPHCGMLWVWQEAQKRVMEVFASTTLADVRARTLDVSRVLGGGTRSPGEYAPPSSV

Samples

Sample ID Description Type Environment
1 3300014968 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG Metagenome Rhizosphere
2 3300003323 Sugarcane root Sample H1 Metagenome Unclassified
3 3300003911 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
4 3300004803 Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-2 (Metagenome Metatranscriptome) Metatranscriptome Rhizosphere
5 3300005289 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 v2 (version 2) Metagenome Rhizosphere
6 3300005295 Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 v2 (version 2) Metagenome Rhizosphere
7 3300005328 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG Metagenome Rhizosphere
8 3300005331 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG Metagenome Rhizosphere
9 3300005334 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 Metagenome Rhizosphere
10 3300005338 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 Metagenome Rhizosphere
11 3300005340 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG Metagenome Rhizosphere
12 3300005345 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG Metagenome Rhizosphere
13 3300005353 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG Metagenome Rhizosphere
14 3300005355 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG Metagenome Rhizosphere
15 3300005366 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG Metagenome Rhizosphere
16 3300005367 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG Metagenome Rhizosphere
17 3300005406 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG Metagenome Rhizosphere
18 3300005434 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG Metagenome Rhizosphere
19 3300005444 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG Metagenome Rhizosphere
20 3300005445 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG Metagenome Rhizosphere
21 3300005459 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 Metagenome Rhizosphere
22 3300005467 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG Metagenome Rhizosphere
23 3300005468 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG Metagenome Rhizosphere
24 3300005471 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG Metagenome Rhizosphere
25 3300005518 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG Metagenome Rhizosphere
26 3300005536 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG Metagenome Rhizosphere
27 3300005544 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG Metagenome Rhizosphere
28 3300005546 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG Metagenome Rhizosphere
29 3300005549 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG Metagenome Rhizosphere
30 3300005617 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 Metagenome Rhizosphere
31 3300005718 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 Metagenome Rhizosphere
32 3300005719 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 Metagenome Rhizosphere
33 3300005841 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 Metagenome Rhizosphere
34 3300005842 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 Metagenome Rhizosphere
35 3300005843 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 Metagenome Rhizosphere
36 3300005844 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 Metagenome Rhizosphere
37 3300005937 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 Metagenome Rhizosphere
38 3300005981 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1 Metagenome Rhizosphere
39 3300005985 Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2 Metagenome Rhizosphere
40 3300006173 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG Metagenome Rhizosphere
41 3300006175 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG Metagenome Rhizosphere
42 3300006237 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2) (version 2) Metagenome Rhizosphere
43 3300006358 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 Metagenome Rhizosphere
44 3300006844 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 Metagenome Rhizosphere
45 3300006846 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 Metagenome Rhizosphere
46 3300006847 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 Metagenome Rhizosphere
47 3300006852 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 Metagenome Rhizosphere
48 3300006871 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 Metagenome Rhizosphere
49 3300006881 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 Metagenome Rhizosphere
50 3300006914 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 Metagenome Rhizosphere
51 3300006931 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 (version 2) (version 2) Metagenome Rhizosphere
52 3300007076 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 Metagenome Rhizosphere
53 3300007265 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 Metagenome Rhizosphere
54 3300009094 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2) (version 2) Metagenome Rhizosphere
55 3300009098 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG Metagenome Rhizosphere
56 3300009147 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2) (version 2) Metagenome Rhizosphere
57 3300009148 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG Metagenome Rhizosphere
58 3300009177 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG Metagenome Rhizosphere
59 3300009553 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG Metagenome Rhizosphere
60 3300013100 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaG Metagenome Rhizosphere
61 3300013296 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG Metagenome Rhizosphere
62 3300013297 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG Metagenome Rhizosphere
63 3300013306 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG Metagenome Rhizosphere
64 3300013308 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG Metagenome Rhizosphere
65 3300014326 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG Metagenome Rhizosphere
66 3300014969 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG Metagenome Rhizosphere
67 3300025899 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes) (version 2) Metagenome Rhizosphere
68 3300025910 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
69 3300025915 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
70 3300025922 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
71 3300025923 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
72 3300025926 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
73 3300025933 Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
74 3300025938 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) (version 2) Metagenome Rhizosphere
75 3300025939 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes) (version 2) Metagenome Rhizosphere
76 3300025941 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes) (version 2) Metagenome Rhizosphere
77 3300025942 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes) (version 2) Metagenome Rhizosphere
78 3300025960 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
79 3300025986 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes) (version 2) Metagenome Rhizosphere
80 3300026023 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) (version 2) Metagenome Rhizosphere
81 3300026075 Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes) (version 2) Metagenome Rhizosphere
82 3300026089 Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes) (version 2) Metagenome Rhizosphere
83 3300026118 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes) (version 2) Metagenome Rhizosphere
84 3300027671 Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1 (SPAdes) (version 2) Metagenome Rhizosphere
85 3300027876 Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S PM (SPAdes) (version 2) Metagenome Rhizosphere
86 3300027907 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes) (version 3) Metagenome Rhizosphere
87 3300028380 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) (version 2) Metagenome Rhizosphere
88 3300028381 Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes) (version 2) Metagenome Rhizosphere
89 3300028573 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaG Metagenome Rhizosphere
90 3300028653 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-25 metaG Metagenome Rhizosphere
91 3300028654 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-12-22 metaG Metagenome Rhizosphere
92 3300028800 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG Metagenome Rhizosphere
93 3300031235 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-19 metaG Metagenome Rhizosphere
94 3300031238 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-26 metaG Metagenome Rhizosphere
95 3300031239 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-24 metaG Metagenome Rhizosphere
96 3300031241 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-14-20 metaG Metagenome Rhizosphere
97 3300031242 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-27 metaG Metagenome Rhizosphere
98 3300031249 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB2-19 metaG Metagenome Rhizosphere
99 3300031250 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-19-23 metaG Metagenome Rhizosphere
100 3300031251 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-16-21 metaG Metagenome Rhizosphere
101 3300031344 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-5-22 metaG Metagenome Rhizosphere
102 3300031548 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3 Metagenome Rhizosphere
103 3300031711 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-1-26 metaG Metagenome Rhizosphere
104 3300031712 Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaG Metagenome Rhizosphere
105 3300031731 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1 Metagenome Rhizosphere
106 3300031824 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2 Metagenome Rhizosphere
107 3300031852 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3 Metagenome Rhizosphere
108 3300031901 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-2 Metagenome Rhizosphere
109 3300031903 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1 Metagenome Rhizosphere
110 3300031911 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-1 Metagenome Rhizosphere
111 3300031995 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2 Metagenome Rhizosphere
112 3300032002 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-3 Metagenome Rhizosphere
113 3300032004 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-3 Metagenome Rhizosphere
114 3300032005 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-1 Metagenome Rhizosphere
115 3300032126 Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-C-2 Metagenome Rhizosphere
116 3300033179 Populus trichocarpa ectomycorrhiza microbial communities from riparian zone in the Pacific Northwest, United States - 7_EM Metagenome Unclassified
117 3300035091 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_4 Metagenome Rhizosphere
118 3300035691 Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_NoN_4 Metagenome Rhizosphere
119 3300035695 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_19 Metagenome Rhizosphere
120 3300035725 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_N_8 Metagenome Rhizosphere
121 3300036401 Populus rhizosphere microbial communities from soil in Oregon, United States - WV94_Oregon_NoN_16 Metagenome Rhizosphere
122 3300037068 Populus rhizosphere microbial communities from soil in Oregon, United States - GW9791_Oregon_NoN_16 Metagenome Rhizosphere
123 3300037471 Enriched cells from switchgrass rhizosphere in EcoFAB chamber, Walnut Creek, California, United States - Plant-Control_C SG_11 Metagenome Rhizosphere
124 3300041411 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0409DE14Z080117_6708 Metagenome Rhizosphere
125 3300042007 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0612DE14Z070717_5290 Metagenome Rhizosphere
126 3300042156 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0116WE14Z082817_5593 Metagenome Rhizosphere
127 3300042435 Rhizosphere microbial communities from Sorghum plant, Scottsbluff, Nebraska, USA - SB0503WE14Z082817_5613 Metagenome Rhizosphere
128 3300042437 Rhizosphere microbial communities from Sorghum plant, Central City, Nebraska, USA - CC0821LE14Z081617_5554 Metagenome Rhizosphere
129 3300044673 Rhizosphere soil microbial communities from rice plants in Newark, Delaware, United States - Bulk_9BB_GED Metagenome Rhizosphere
130 3300046455 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-307-CL1_26_33 rhizosphere Metagenome Rhizosphere
131 3300046472 Rhizosphere soil microbial communities from poplar common garden site in Clatskanie, Oregon, USA - BESC-13-CL1_35_33 rhizosphere Metagenome Rhizosphere
132 3300049513 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D25_A_7_control Metagenome Rhizosphere
133 3300049568 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_01 Metagenome Rhizosphere
134 3300049569 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_02 Metagenome Rhizosphere
135 3300049570 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - WT_TR_GHRAS_03 Metagenome Rhizosphere
136 3300049571 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_01 Metagenome Rhizosphere
137 3300049573 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_01 Metagenome Rhizosphere
138 3300049575 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L2_TR_GHRAS_03 Metagenome Rhizosphere
139 3300049577 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_02 Metagenome Rhizosphere
140 3300049578 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L3_TR_GHRAS_03 Metagenome Rhizosphere
141 3300049579 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_01 Metagenome Rhizosphere
142 3300049581 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L5_TR_GHRAS_02 Metagenome Rhizosphere
143 3300049584 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_02 Metagenome Rhizosphere
144 3300049585 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - WT_T2_FRAS_03 Metagenome Rhizosphere
145 3300049586 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_01 Metagenome Rhizosphere
146 3300049587 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_02 Metagenome Rhizosphere
147 3300049588 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L1_T2_FRAS_03 Metagenome Rhizosphere
148 3300049589 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_01 Metagenome Rhizosphere
149 3300049590 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_02 Metagenome Rhizosphere
150 3300049591 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L2_T2_FRAS_03 Metagenome Rhizosphere
151 3300049592 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_01 Metagenome Rhizosphere
152 3300049593 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_02 Metagenome Rhizosphere
153 3300049668 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I4_B_2_drought Metagenome Rhizosphere
154 3300049669 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - C1_B_2_drought Metagenome Rhizosphere
155 3300049675 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - I12_A_3_control Metagenome Rhizosphere
156 3300049690 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - G13_A_4_drought Metagenome Rhizosphere
157 3300049708 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - D14_A_3_control Metagenome Rhizosphere
158 3300049741 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_01 Metagenome Rhizosphere
159 3300049742 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_02 Metagenome Rhizosphere
160 3300049743 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L4_T2_FRAS_03 Metagenome Rhizosphere
161 3300049744 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_02 Metagenome Rhizosphere
162 3300049760 Panicgrass rhizosphere microbial communities from growth chamber in LBNL, Berkeley, California, USA - F12_A_4_control Metagenome Rhizosphere
163 3300049822 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L1_TR_GHRAS_02 Metagenome Rhizosphere
164 3300049823 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_02 Metagenome Rhizosphere
165 3300049824 Sugarcane rhizosphere microbial communities from a greenhouse in University of Florida, Reddick, FL, USA - L4_TR_GHRAS_03 Metagenome Rhizosphere
166 3300050507 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 re-annotation Metagenome Rhizosphere
167 3300050508 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3 re-annotation Metagenome Rhizosphere
168 3300050509 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4 re-annotation Metagenome Rhizosphere
169 3300050510 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5 re-annotation Metagenome Rhizosphere
170 3300050511 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 re-annotation Metagenome Rhizosphere
171 3300050512 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 re-annotation Metagenome Rhizosphere
172 3300050513 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 re-annotation Metagenome Rhizosphere
173 3300050514 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 re-annotation Metagenome Rhizosphere
174 3300050515 Populus rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2 re-annotation Metagenome Rhizosphere
175 3300054114 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_03 Metagenome Rhizosphere
176 3300059421 Rhizosphere soil microbial communities from sorghum plant in University of Arizona Maricopa Agricultural Center, AZ, USA - 6_0-15_MAC_RHIZO_20210810 Metagenome Rhizosphere
177 3300060353 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L5_T2_FRAS_01 Metagenome Rhizosphere
178 3300061734 Sugarcane rhizosphere microbial communities from experimental field in University of Florida, Reddick, FL, USA - L3_T2_FRAS_03 (v2) (version 2) Metagenome Rhizosphere

Type Distribution

Type Percentage (%)
Metagenomes 99.64
Metatranscriptomes 0.36
Isolates 0

Biome Distribution

Category Percentage (%)
Aerial Root 0
Bulb 0
Endosphere 0
Nodule 0
Rhizoplane 0
Rhizosphere 99.28
Stem 0
Stem Tuber 0
Unclassified 23.55

Taxonomy

Scaffolds

Scaffold Dataset Taxonomy Length
1 Ga0157379_10000090 3300014968 Bacteria 61130
2 rootH1_10053940 3300003323 Bacteria 2251
3 JGI25405J52794_10000230 3300003911 Bacteria 7361
4 Ga0058862_12885772 3300004803 Unclassified 740
5 Ga0065704_10288920 3300005289 Unclassified 856
6 Ga0065707_10001496 3300005295 Bacteria 11548
7 Ga0070676_10520132 3300005328 Unclassified 848
8 Ga0070670_101882334 3300005331 Unclassified 551
9 Ga0068869_100001062 3300005334 Bacteria 16027
10 Ga0068868_100195215 3300005338 Bacteria 1685
11 Ga0070689_100109122 3300005340 Unclassified 2199
12 Ga0070692_10662474 3300005345 Bacteria 698
13 Ga0070669_100110132 3300005353 Bacteria 2089
14 Ga0070669_100359898 3300005353 Unclassified 1183
15 Ga0070671_100230095 3300005355 Bacteria 1573
16 Ga0070671_101748050 3300005355 Unclassified 552
17 Ga0070659_100884074 3300005366 Unclassified 780
18 Ga0070667_100644915 3300005367 Unclassified 977
19 Ga0070703_10289939 3300005406 Unclassified 678
20 Ga0070709_10277193 3300005434 Bacteria 1217
21 Ga0070694_100472026 3300005444 Bacteria 994
22 Ga0070708_100013221 3300005445 Bacteria 6752
23 Ga0070708_100168908 3300005445 Bacteria 2041
24 Ga0070708_100412598 3300005445 Bacteria 1273
25 Ga0070708_100637230 3300005445 Unclassified 1004
26 Ga0070708_101145369 3300005445 Bacteria 728
27 Ga0068867_100001163 3300005459 Bacteria 17981
28 Ga0068867_101612047 3300005459 Unclassified 607
29 Ga0070706_100030008 3300005467 Bacteria 5007
30 Ga0070706_100033944 3300005467 Bacteria 4711
31 Ga0070707_100034468 3300005468 Bacteria 4827
32 Ga0070707_100487043 3300005468 Unclassified 1195
33 Ga0070698_100385577 3300005471 Unclassified 1334
34 Ga0070698_100835121 3300005471 Unclassified 866
35 Ga0070699_100097629 3300005518 Bacteria 2574
36 Ga0070699_100108641 3300005518 Bacteria 2434
37 Ga0070697_100031365 3300005536 Unclassified 4275
38 Ga0070697_100056509 3300005536 Bacteria 3193
39 Ga0070697_100129721 3300005536 Bacteria 2114
40 Ga0070697_100130840 3300005536 Bacteria 2104
41 Ga0070697_100202164 3300005536 Bacteria 1689
42 Ga0070697_100587542 3300005536 Bacteria 978
43 Ga0070697_100852754 3300005536 Bacteria 807
44 Ga0070686_101594063 3300005544 Unclassified 552
45 Ga0070696_100036500 3300005546 Bacteria 3389
46 Ga0070704_100283388 3300005549 Bacteria 1374
47 Ga0070704_100345544 3300005549 Bacteria 1254
48 Ga0068859_100107738 3300005617 Bacteria 2847
49 Ga0068866_10023049 3300005718 Bacteria 2890
50 Ga0068861_100730555 3300005719 Bacteria 923
51 Ga0068861_101068418 3300005719 Bacteria 774
52 Ga0068863_100065632 3300005841 Bacteria 3434
53 Ga0068858_100169254 3300005842 Bacteria 2060
54 Ga0068860_100355103 3300005843 Bacteria 1443
55 Ga0068862_100823743 3300005844 Bacteria 908
56 Ga0081455_10014054 3300005937 Bacteria 7868
57 Ga0081455_10137749 3300005937 Bacteria 1899
58 Ga0081538_10010829 3300005981 Bacteria 7445
59 Ga0081538_10062854 3300005981 Bacteria 2113
60 Ga0081539_10029850 3300005985 Bacteria 3397
61 Ga0070716_100020599 3300006173 Bacteria 3463
62 Ga0070712_100647103 3300006175 Bacteria 898
63 Ga0097621_100019851 3300006237 Bacteria 5169
64 Ga0068871_100011540 3300006358 Bacteria 6481
65 Ga0068871_100517911 3300006358 Viruses 1077
66 Ga0075428_101218967 3300006844 Bacteria 793
67 Ga0075430_100191109 3300006846 Bacteria 1701
68 Ga0075431_100005499 3300006847 Bacteria 12511
69 Ga0075431_100073853 3300006847 Unclassified 3519
70 Ga0075433_10090634 3300006852 Bacteria 2703
71 Ga0075433_10268235 3300006852 Unclassified 1513
72 Ga0075433_10758289 3300006852 Bacteria 849
73 Ga0075433_11219319 3300006852 Unclassified 653
74 Ga0075434_100349514 3300006871 Unclassified 1499
75 Ga0075434_100597164 3300006871 Bacteria 1123
76 Ga0068865_100011912 3300006881 Bacteria 5458
77 Ga0068865_101525146 3300006881 Unclassified 599
78 Ga0075436_100410753 3300006914 Unclassified 982
79 Ga0075436_100572841 3300006914 Unclassified 830
80 Ga0097620_100107736 3300006931 Bacteria 2847
81 Ga0075435_100227710 3300007076 Bacteria 1583
82 Ga0099794_10044524 3300007265 Unclassified 2121
83 Ga0099794_10073890 3300007265 Bacteria 1674
84 Ga0111539_10553284 3300009094 Bacteria 1340
85 Ga0111539_10562224 3300009094 Bacteria 1328
86 Ga0105245_11703735 3300009098 Unclassified 683
87 Ga0114129_10021222 3300009147 Bacteria 9222
88 Ga0114129_10440769 3300009147 Bacteria 1710
89 Ga0114129_10599664 3300009147 Bacteria 1427
90 Ga0114129_10782418 3300009147 Bacteria 1219
91 Ga0114129_11305636 3300009147 Bacteria 899
92 Ga0114129_12254023 3300009147 Unclassified 654
93 Ga0114129_12391005 3300009147 Unclassified 633
94 Ga0105243_11488222 3300009148 Bacteria 700
95 Ga0105248_10123509 3300009177 Bacteria 2920
96 Ga0105248_11062748 3300009177 Unclassified 915
97 Ga0105249_10969780 3300009553 Bacteria 918
98 Ga0157373_11215403 3300013100 Unclassified 568
99 Ga0157374_10474122 3300013296 Bacteria 1254
100 Ga0157378_10011518 3300013297 Bacteria 7742
101 Ga0157378_10118752 3300013297 Bacteria 2435
102 Ga0157378_10332035 3300013297 Bacteria 1480
103 Ga0157378_10889851 3300013297 Bacteria 921
104 Ga0163162_11513954 3300013306 Bacteria 764
105 Ga0157375_11479674 3300013308 Unclassified 801
106 Ga0157375_11882519 3300013308 Unclassified 710
107 Ga0157380_10501248 3300014326 Bacteria 1179
108 Ga0157380_10852207 3300014326 Bacteria 933
109 Ga0157380_11017713 3300014326 Unclassified 863
110 Ga0157376_10144417 3300014969 Bacteria 2139
111 Ga0157376_10671214 3300014969 Unclassified 1039
112 Ga0207642_10039114 3300025899 Bacteria 2058
113 Ga0207684_10025923 3300025910 Bacteria 4997
114 Ga0207693_10426958 3300025915 Bacteria 1036
115 Ga0207646_10497456 3300025922 Unclassified 1099
116 Ga0207681_10402013 3300025923 Viruses 1107
117 Ga0207681_10651587 3300025923 Unclassified 873
118 Ga0207681_11025869 3300025923 Bacteria 692
119 Ga0207659_10244272 3300025926 Bacteria 1454
120 Ga0207706_10815029 3300025933 Bacteria 792
121 Ga0207704_10041084 3300025938 Bacteria 2708
122 Ga0207704_11626105 3300025938 Unclassified 555
123 Ga0207665_10020813 3300025939 Bacteria 4312
124 Ga0207711_10758110 3300025941 Bacteria 905
125 Ga0207689_10002831 3300025942 Bacteria 16006
126 Ga0207651_11201415 3300025960 Viruses 681
127 Ga0207658_10074483 3300025986 Bacteria 2580
128 Ga0207677_10170723 3300026023 Bacteria 1700
129 Ga0207708_11260187 3300026075 Unclassified 647
130 Ga0207648_10606581 3300026089 Bacteria 1009
131 Ga0207648_10957279 3300026089 Unclassified 801
132 Ga0207675_100230237 3300026118 Bacteria 1788
133 Ga0207675_100277297 3300026118 Bacteria 1628
134 Ga0207675_100720470 3300026118 Bacteria 1007
135 Ga0209588_1066936 3300027671 Bacteria 1161
136 Ga0209974_10027563 3300027876 Bacteria 1880
137 Ga0207428_10017833 3300027907 Bacteria 6086
138 Ga0207428_10968754 3300027907 Unclassified 599
139 Ga0268265_10538988 3300028380 Bacteria 1106
140 Ga0268265_12101757 3300028380 Unclassified 572
141 Ga0268264_12471810 3300028381 Unclassified 525
142 Ga0265334_10016886 3300028573 Bacteria 3018
143 Ga0265323_10000005 3300028653 Bacteria 196003
144 Ga0265323_10007709 3300028653 Bacteria 4457
145 Ga0265323_10011794 3300028653 Bacteria 3516
146 Ga0265323_10013208 3300028653 Bacteria 3298
147 Ga0265323_10013386 3300028653 Bacteria 3272
148 Ga0265323_10058939 3300028653 Unclassified 1339
149 Ga0265323_10250042 3300028653 Unclassified 552
150 Ga0265322_10000295 3300028654 Bacteria 21229
151 Ga0265322_10000613 3300028654 Bacteria 13496
152 Ga0265322_10085646 3300028654 Unclassified 895
153 Ga0265338_10041273 3300028800 Bacteria 4317
154 Ga0265330_10015219 3300031235 Bacteria 3560
155 Ga0265330_10044195 3300031235 Bacteria 1968
156 Ga0265330_10051775 3300031235 Bacteria 1800
157 Ga0265330_10138735 3300031235 Bacteria 1034
158 Ga0265332_10000182 3300031238 Bacteria 52030
159 Ga0265328_10001815 3300031239 Bacteria 9740
160 Ga0265325_10006171 3300031241 Bacteria 7311
161 Ga0265329_10031488 3300031242 Bacteria 1722
162 Ga0265329_10119351 3300031242 Bacteria 845
163 Ga0265339_10235917 3300031249 Bacteria 890
164 Ga0265331_10000059 3300031250 Bacteria 172466
165 Ga0265331_10152109 3300031250 Bacteria 1050
166 Ga0265327_10379181 3300031251 Bacteria 616
167 Ga0265316_10000052 3300031344 Bacteria 126151
168 Ga0265316_10001945 3300031344 Bacteria 21703
169 Ga0265316_10036698 3300031344 Bacteria 3962
170 Ga0265316_10172249 3300031344 Bacteria 1614
171 Ga0265316_10216289 3300031344 Bacteria 1415
172 Ga0265316_10231971 3300031344 Bacteria 1359
173 Ga0307408_100000003 3300031548 Bacteria 618438
174 Ga0307408_100053293 3300031548 Bacteria 2920
175 Ga0265314_10001192 3300031711 Bacteria 29850
176 Ga0265314_10193249 3300031711 Bacteria 1209
177 Ga0265314_10399774 3300031711 Unclassified 743
178 Ga0265342_10002260 3300031712 Bacteria 16824
179 Ga0265342_10014513 3300031712 Bacteria 5226
180 Ga0265342_10087621 3300031712 Bacteria 1788
181 Ga0265342_10292892 3300031712 Bacteria 859
182 Ga0307405_10235284 3300031731 Bacteria 1353
183 Ga0307405_10275458 3300031731 Bacteria 1264
184 Ga0307413_10002582 3300031824 Bacteria 7404
185 Ga0307413_10050430 3300031824 Bacteria 2501
186 Ga0307410_10000021 3300031852 Bacteria 63358
187 Ga0307406_11808425 3300031901 Bacteria 543
188 Ga0307407_10140781 3300031903 Bacteria 1556
189 Ga0307412_10062165 3300031911 Bacteria 2513
190 Ga0307412_10101326 3300031911 Bacteria 2037
191 Ga0307409_100000013 3300031995 Bacteria 64596
192 Ga0307409_100002917 3300031995 Bacteria 9085
193 Ga0307416_100000057 3300032002 Bacteria 105624
194 Ga0307416_100000930 3300032002 Bacteria 15502
195 Ga0307414_10507097 3300032004 Bacteria 1068
196 Ga0307411_10202306 3300032005 Bacteria 1526
197 Ga0307411_10797849 3300032005 Bacteria 831
198 Ga0307411_10920131 3300032005 Bacteria 778
199 Ga0307415_101795215 3300032126 Bacteria 593
200 Ga0307507_10559155 3300033179 Unclassified 601
201 Ga0373951_0003699 3300035091 Bacteria 3690
202 Ga0373931_0391256 3300035691 Bacteria 878
203 Ga0373927_0080645 3300035695 Bacteria 2109
204 Ga0373947_0141512 3300035725 Bacteria 1543
205 Ga0373937_0150085 3300036401 Bacteria 2183
206 Ga0373925_0104001 3300037068 Bacteria 2186
207 Ga0395905_0000030 3300037471 Bacteria 289430
208 Ga0439466_0116287 3300041411 Unclassified 827
209 Ga0439449_0151049 3300042007 Bacteria 866
210 Ga0439446_0064518 3300042156 Bacteria 1112
211 Ga0439434_0028696 3300042435 Bacteria 1686
212 Ga0439444_0146571 3300042437 Unclassified 568
213 Ga0453683_0003894 3300044673 Bacteria 10818
214 Ga0453683_0114461 3300044673 Bacteria 1697
215 Ga0453683_0155688 3300044673 Bacteria 1445
216 Ga0495603_0336721 3300046455 Bacteria 866
217 Ga0495580_0000733 3300046472 Bacteria 28061
218 Ga0495580_0431212 3300046472 Bacteria 886
219 Ga0501290_037528 3300049513 Bacteria 715
220 Ga0501031_0121364 3300049568 Unclassified 1707
221 Ga0501032_0060339 3300049569 Bacteria 2543
222 Ga0501033_0017684 3300049570 Bacteria 5384
223 Ga0501034_0021087 3300049571 Bacteria 6649
224 Ga0501037_0007800 3300049573 Bacteria 7837
225 Ga0501039_0022306 3300049575 Bacteria 4860
226 Ga0501041_0099664 3300049577 Unclassified 1797
227 Ga0501042_0119721 3300049578 Unclassified 1895
228 Ga0501043_0071194 3300049579 Bacteria 2731
229 Ga0501047_0193083 3300049581 Bacteria 1899
230 Ga0501068_0015335 3300049584 Bacteria 4397
231 Ga0501069_0046787 3300049585 Bacteria 2400
232 Ga0501070_0044078 3300049586 Bacteria 3712
233 Ga0501071_0029313 3300049587 Bacteria 3883
234 Ga0501072_0103524 3300049588 Bacteria 2262
235 Ga0501073_0034453 3300049589 Bacteria 3603
236 Ga0501074_0030764 3300049590 Bacteria 3889
237 Ga0501075_0052620 3300049591 Bacteria 3061
238 Ga0501076_0141673 3300049592 Bacteria 1953
239 Ga0501077_0030718 3300049593 Bacteria 3418
240 Ga0501233_148744 3300049668 Unclassified 652
241 Ga0501235_053837 3300049669 Unclassified 935
242 Ga0501243_008331 3300049675 Bacteria 1596
243 Ga0501261_012434 3300049690 Bacteria 1146
244 Ga0501245_023467 3300049708 Bacteria 980
245 Ga0501079_0066637 3300049741 Bacteria 2778
246 Ga0501080_0039647 3300049742 Bacteria 4396
247 Ga0501081_0064475 3300049743 Bacteria 2544
248 Ga0501081_0568971 3300049743 Unclassified 847
249 Ga0501081_0956018 3300049743 Unclassified 647
250 Ga0501083_0006510 3300049744 Bacteria 8282
251 Ga0501263_050408 3300049760 Unclassified 632
252 Ga0501035_0025155 3300049822 Bacteria 5457
253 Ga0501044_0024720 3300049823 Bacteria 6372
254 Ga0501045_0064553 3300049824 Bacteria 2687
255 nmdc:mga05p37_1299619_c1 3300050507 Bacteria 742
256 nmdc:mga05p37_23759_c1 3300050507 Bacteria 7443
257 nmdc:mga05p37_339604_c1 3300050507 Bacteria 1771
258 nmdc:mga09592_646277_c1 3300050508 Unclassified 903
259 nmdc:mga0qj67_293354_c1 3300050509 Bacteria 1318
260 nmdc:mga0qj67_527277_c1 3300050509 Bacteria 948
261 nmdc:mga06r32_38135_c1 3300050510 Bacteria 4550
262 nmdc:mga06r32_81762_c1 3300050510 Unclassified 3146
263 nmdc:mga08y16_549124_c1 3300050511 Unclassified 1169
264 nmdc:mga0n895_16303_c1 3300050512 Bacteria 6814
265 nmdc:mga0n895_308033_c1 3300050512 Bacteria 1605
266 nmdc:mga0n895_394382_c1 3300050512 Bacteria 1400
267 nmdc:mga0rr50_47735_c1 3300050513 Bacteria 3161
268 nmdc:mga0rr50_876859_c1 3300050513 Unclassified 765
269 nmdc:mga08x19_223521_c1 3300050514 Unclassified 1294
270 nmdc:mga0a205_255182_c1 3300050515 Unclassified 1632
271 nmdc:mga0a205_476464_c1 3300050515 Unclassified 1107
272 Ga0501084_0104846 3300054114 Bacteria 2374
273 Ga0590071_056916 3300059421 Unclassified 952
274 Ga0501082_0097264 3300060353 Bacteria 2544
275 Ga0530510_0029938 3300061734 Bacteria 3908
276 Ga0530510_0044017 3300061734 Bacteria 3225
277 Ga0157379_10000090
278 rootH1_10053940
279 JGI25405J52794_10000230
280 Ga0058862_12885772
281 Ga0065704_10288920
282 Ga0065707_10001496
283 Ga0070676_10520132
284 Ga0070670_101882334
285 Ga0068869_100001062
286 Ga0068868_100195215
287 Ga0070689_100109122
288 Ga0070692_10662474
289 Ga0070669_100110132
290 Ga0070669_100359898
291 Ga0070671_100230095
292 Ga0070671_101748050
293 Ga0070659_100884074
294 Ga0070667_100644915
295 Ga0070703_10289939
296 Ga0070709_10277193
297 Ga0070694_100472026
298 Ga0070708_100013221
299 Ga0070708_100168908
300 Ga0070708_100412598
301 Ga0070708_100637230
302 Ga0070708_101145369
303 Ga0068867_100001163
304 Ga0068867_101612047
305 Ga0070706_100030008
306 Ga0070706_100033944
307 Ga0070707_100034468
308 Ga0070707_100487043
309 Ga0070698_100385577
310 Ga0070698_100835121
311 Ga0070699_100097629
312 Ga0070699_100108641
313 Ga0070697_100031365
314 Ga0070697_100056509
315 Ga0070697_100129721
316 Ga0070697_100130840
317 Ga0070697_100202164
318 Ga0070697_100587542
319 Ga0070697_100852754
320 Ga0070686_101594063
321 Ga0070696_100036500
322 Ga0070704_100283388
323 Ga0070704_100345544
324 Ga0068859_100107738
325 Ga0068866_10023049
326 Ga0068861_100730555
327 Ga0068861_101068418
328 Ga0068863_100065632
329 Ga0068858_100169254
330 Ga0068860_100355103
331 Ga0068862_100823743
332 Ga0081455_10014054
333 Ga0081455_10137749
334 Ga0081538_10010829
335 Ga0081538_10062854
336 Ga0081539_10029850
337 Ga0070716_100020599
338 Ga0070712_100647103
339 Ga0097621_100019851
340 Ga0068871_100011540
341 Ga0068871_100517911
342 Ga0075428_101218967
343 Ga0075430_100191109
344 Ga0075431_100005499
345 Ga0075431_100073853
346 Ga0075433_10090634
347 Ga0075433_10268235
348 Ga0075433_10758289
349 Ga0075433_11219319
350 Ga0075434_100349514
351 Ga0075434_100597164
352 Ga0068865_100011912
353 Ga0068865_101525146
354 Ga0075436_100410753
355 Ga0075436_100572841
356 Ga0097620_100107736
357 Ga0075435_100227710
358 Ga0099794_10044524
359 Ga0099794_10073890
360 Ga0111539_10553284
361 Ga0111539_10562224
362 Ga0105245_11703735
363 Ga0114129_10021222
364 Ga0114129_10440769
365 Ga0114129_10599664
366 Ga0114129_10782418
367 Ga0114129_11305636
368 Ga0114129_12254023
369 Ga0114129_12391005
370 Ga0105243_11488222
371 Ga0105248_10123509
372 Ga0105248_11062748
373 Ga0105249_10969780
374 Ga0157373_11215403
375 Ga0157374_10474122
376 Ga0157378_10011518
377 Ga0157378_10118752
378 Ga0157378_10332035
379 Ga0157378_10889851
380 Ga0163162_11513954
381 Ga0157375_11479674
382 Ga0157375_11882519
383 Ga0157380_10501248
384 Ga0157380_10852207
385 Ga0157380_11017713
386 Ga0157376_10144417
387 Ga0157376_10671214
388 Ga0207642_10039114
389 Ga0207684_10025923
390 Ga0207693_10426958
391 Ga0207646_10497456
392 Ga0207681_10402013
393 Ga0207681_10651587
394 Ga0207681_11025869
395 Ga0207659_10244272
396 Ga0207706_10815029
397 Ga0207704_10041084
398 Ga0207704_11626105
399 Ga0207665_10020813
400 Ga0207711_10758110
401 Ga0207689_10002831
402 Ga0207651_11201415
403 Ga0207658_10074483
404 Ga0207677_10170723
405 Ga0207708_11260187
406 Ga0207648_10606581
407 Ga0207648_10957279
408 Ga0207675_100230237
409 Ga0207675_100277297
410 Ga0207675_100720470
411 Ga0209588_1066936
412 Ga0209974_10027563
413 Ga0207428_10017833
414 Ga0207428_10968754
415 Ga0268265_10538988
416 Ga0268265_12101757
417 Ga0268264_12471810
418 Ga0265334_10016886
419 Ga0265323_10000005
420 Ga0265323_10007709
421 Ga0265323_10011794
422 Ga0265323_10013208
423 Ga0265323_10013386
424 Ga0265323_10058939
425 Ga0265323_10250042
426 Ga0265322_10000295
427 Ga0265322_10000613
428 Ga0265322_10085646
429 Ga0265338_10041273
430 Ga0265330_10015219
431 Ga0265330_10044195
432 Ga0265330_10051775
433 Ga0265330_10138735
434 Ga0265332_10000182
435 Ga0265328_10001815
436 Ga0265325_10006171
437 Ga0265329_10031488
438 Ga0265329_10119351
439 Ga0265339_10235917
440 Ga0265331_10000059
441 Ga0265331_10152109
442 Ga0265327_10379181
443 Ga0265316_10000052
444 Ga0265316_10001945
445 Ga0265316_10036698
446 Ga0265316_10172249
447 Ga0265316_10216289
448 Ga0265316_10231971
449 Ga0307408_100000003
450 Ga0307408_100053293
451 Ga0265314_10001192
452 Ga0265314_10193249
453 Ga0265314_10399774
454 Ga0265342_10002260
455 Ga0265342_10014513
456 Ga0265342_10087621
457 Ga0265342_10292892
458 Ga0307405_10235284
459 Ga0307405_10275458
460 Ga0307413_10002582
461 Ga0307413_10050430
462 Ga0307410_10000021
463 Ga0307406_11808425
464 Ga0307407_10140781
465 Ga0307412_10062165
466 Ga0307412_10101326
467 Ga0307409_100000013
468 Ga0307409_100002917
469 Ga0307416_100000057
470 Ga0307416_100000930
471 Ga0307414_10507097
472 Ga0307411_10202306
473 Ga0307411_10797849
474 Ga0307411_10920131
475 Ga0307415_101795215
476 Ga0307507_10559155
477 Ga0373951_0003699
478 Ga0373931_0391256
479 Ga0373927_0080645
480 Ga0373947_0141512
481 Ga0373937_0150085
482 Ga0373925_0104001
483 Ga0395905_0000030
484 Ga0439466_0116287
485 Ga0439449_0151049
486 Ga0439446_0064518
487 Ga0439434_0028696
488 Ga0439444_0146571
489 Ga0453683_0003894
490 Ga0453683_0114461
491 Ga0453683_0155688
492 Ga0495603_0336721
493 Ga0495580_0000733
494 Ga0495580_0431212
495 Ga0501290_037528
496 Ga0501031_0121364
497 Ga0501032_0060339
498 Ga0501033_0017684
499 Ga0501034_0021087
500 Ga0501037_0007800
501 Ga0501039_0022306
502 Ga0501041_0099664
503 Ga0501042_0119721
504 Ga0501043_0071194
505 Ga0501047_0193083
506 Ga0501068_0015335
507 Ga0501069_0046787
508 Ga0501070_0044078
509 Ga0501071_0029313
510 Ga0501072_0103524
511 Ga0501073_0034453
512 Ga0501074_0030764
513 Ga0501075_0052620
514 Ga0501076_0141673
515 Ga0501077_0030718
516 Ga0501233_148744
517 Ga0501235_053837
518 Ga0501243_008331
519 Ga0501261_012434
520 Ga0501245_023467
521 Ga0501079_0066637
522 Ga0501080_0039647
523 Ga0501081_0064475
524 Ga0501081_0568971
525 Ga0501081_0956018
526 Ga0501083_0006510
527 Ga0501263_050408
528 Ga0501035_0025155
529 Ga0501044_0024720
530 Ga0501045_0064553
531 nmdc:mga05p37_1299619_c1
532 nmdc:mga05p37_23759_c1
533 nmdc:mga05p37_339604_c1
534 nmdc:mga09592_646277_c1
535 nmdc:mga0qj67_293354_c1
536 nmdc:mga0qj67_527277_c1
537 nmdc:mga06r32_38135_c1
538 nmdc:mga06r32_81762_c1
539 nmdc:mga08y16_549124_c1
540 nmdc:mga0n895_16303_c1
541 nmdc:mga0n895_308033_c1
542 nmdc:mga0n895_394382_c1
543 nmdc:mga0rr50_47735_c1
544 nmdc:mga0rr50_876859_c1
545 nmdc:mga08x19_223521_c1
546 nmdc:mga0a205_255182_c1
547 nmdc:mga0a205_476464_c1
548 Ga0501084_0104846
549 Ga0590071_056916
550 Ga0501082_0097264
551 Ga0530510_0029938
552 Ga0530510_0044017

MSA Aligner

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Family Sequences

Functional Annotation

PFAM ID Name Description Start Position End Position Accuracy

PF02082

Rrf2

Iron-dependent Transcriptional regulator

6

140

0.97

Structural Annotation

Top 5 Hits

ID Description Score Start End
5zuo-assembly1.cif.gz_A crystal structure of bz junction in diverse sequence 0.9252 27 70
5zup-assembly1.cif.gz_A crystal structure of bz junction in diverse sequence 0.9214 27 70
4kmf-assembly1.cif.gz_A-2 crystal structure of zalpha domain from carassius auratus pkz in complex with z-dna 0.9009 4 68
3irq-assembly1.cif.gz_A crystal structure of a z-z junction 0.8969 8 68
4hf2-assembly1.cif.gz_A crystal structure of e43a iscr mutant bound to its promoter 0.8958 1 125
ID Description Score Start End Superfamily
af_Q57693_7_69_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9296 11 68 1.10.10.10
5zuoA00 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9252 27 70 1.10.10.10
af_Q5NE14_88_145_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9242 6 68 1.10.10.10
af_P0ACN4_17_92_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9059 6 68 1.10.10.10
af_P0ACK8_1_59_1.10.10.10 Mainly Alpha;Orthogonal Bundle;Arc Repressor Mutant, subunit A;Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.9043 5 70 1.10.10.10
ID Description Score Start End GO Terms
AF-A0A350XGP3-F1-model_v4 Transcriptional regulator 0.9445 1 125 GO:0003700
GO:0005829
AF-A0A6N7UR04-F1-model_v4 Rrf2 family transcriptional regulator 0.937 1 127 GO:0003700
GO:0005829
AF-A0A3M1M7S9-F1-model_v4 Rrf2 family transcriptional regulator 0.9325 1 125 GO:0003700
GO:0005829
AF-A0A7X7E3M0-F1-model_v4 Rrf2 family transcriptional regulator 0.9316 1 125 GO:0003700
GO:0005829
AF-A0A1S8QX40-F1-model_v4 deleted 0.9307 1 125

Map